# HG changeset patch # User greg # Date 1693515323 0 # Node ID f5a9f1969199ac6a81718c74efc61c547c36385a # Parent 163260afc1b1afd971d2a69c5a855e5574bf86b3 Uploaded diff -r 163260afc1b1 -r f5a9f1969199 pima_report.py --- a/pima_report.py Thu Aug 31 18:30:13 2023 +0000 +++ b/pima_report.py Thu Aug 31 20:55:23 2023 +0000 @@ -479,13 +479,13 @@ 'Small indels', '{:,}'.format(quast_indels) ] + self.doc.new_table(columns=2, rows=3, text=Table_1, text_align='left') + self.doc.new_line('
') + self.doc.new_line() except Exception: # Likely a high dissimilarity bewteen the sample # and the reference, resulting in a failed alignment. pass - self.doc.new_table(columns=2, rows=3, text=Table_1, text_align='left') - self.doc.new_line('
') - self.doc.new_line() # TODO: self.alignment_notes is not currently populated. if len(self.alignment_notes) > 0: self.doc.new_header(level=3, title=self.alignment_notes_title)