Mercurial > repos > greg > plant_tribes_assembly_post_processor

annotate test-data/transcripts.cleaned.cds @ 7:ade62ce0029b draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author greg
date Tue, 04 Sep 2018 08:49:55 -0400
parents fcc558568020
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
fcc558568020 Uploaded
greg
parents:
diff changeset
1 >contig_1
fcc558568020 Uploaded
greg
parents:
diff changeset
2 AAAAAATTATATGGAGACAAGGAAGATATCCTTGTCCCAGATATTTTCTGGGATTACACGAGTGGAAAGGTGCTAACAAT
fcc558568020 Uploaded
greg
parents:
diff changeset
3 GGAGTGGGTTGAAGGTGTTAAATTAAATGAGCAAGATGCCGTTGAGAGTCAAGGGCTCAGTGTTCTGGATCTGGTGAATA
fcc558568020 Uploaded
greg
parents:
diff changeset
4 CCGGCATACAGTGCAGTCTTCGACAGCTGCTTGAGTACGGCTATTTTCATGCAGATCCTCACCCAGGGAATCTCTTAGCT
fcc558568020 Uploaded
greg
parents:
diff changeset
5 ACACCTGACGGGAAGCTTGCTTTTCTTGATTTTGGAATGATGAGTGAGACTCCTGAACAAGCAAGATCGGCCATAATTGG
fcc558568020 Uploaded
greg
parents:
diff changeset
6 TCATGTTGTACACATGGTTAAT
fcc558568020 Uploaded
greg
parents:
diff changeset
7 >contig_2
fcc558568020 Uploaded
greg
parents:
diff changeset
8 CTTTCCAAGGTACCCATCCCATCCAACAACATATATGCTATAAATGATAAGAAGTCCCCGGAAGATGCAGCAGACGACTA
fcc558568020 Uploaded
greg
parents:
diff changeset
9 CGAAAACCGCCTCAAGGAACTCGTCTCCGAAAAAATCATACCCGTTTCAACCATTAGCGGGTTCCCGAAGTTCGACCTCA
fcc558568020 Uploaded
greg
parents:
diff changeset
10 TGTTGCTTGGAATGGGGCCCGACGGCCATGTGGCCTCTCTTTTCCCTTCTCACATGCAACGCTATGAGAAGGAGAAATGG
fcc558568020 Uploaded
greg
parents:
diff changeset
11 GTCACTTTCATAACTGACTCTCCCAAACCGCCTCCGTCGAGAATCACTTTTACGTTTCCGATGATCAACTCGGCTTCGGA
fcc558568020 Uploaded
greg
parents:
diff changeset
12 GATCGCTATGGTGGTTACCGGGGCTGATTTGGCTGGTACAACTAAGATAGCATTGGGTACTACGGGCAATGTTAAGCCGG
fcc558568020 Uploaded
greg
parents:
diff changeset
13 GTGAGACTCCTTTGCCTTGTACTGAAGTTTCGGCTGAGGGAGAGGTTACTTGGTTCTTGGACAAAGATGCTGCTTCACAA
fcc558568020 Uploaded
greg
parents:
diff changeset
14 CTGTTAAATTATGTGCGCTTTGATGAT
fcc558568020 Uploaded
greg
parents:
diff changeset
15 >contig_3
fcc558568020 Uploaded
greg
parents:
diff changeset
16 GTGGATGAAGGAGTTGTTGTTGCTGGCTTGTCAGAGCAGGAGAAGGCATCTGTTTCTGAAATTCTGACAACTGCTAGAGC
fcc558568020 Uploaded
greg
parents:
diff changeset
17 TCATTCAGAAACAATTGAGAACCTTAAGAGAGATCATTCCCAGCAGGTATCCTGTATCGAACAGCACACGAATGATACTT
fcc558568020 Uploaded
greg
parents:
diff changeset
18 TCAGGCAAAAATACATGGATTACGAGCCTACAGGGTCCACGCCAGTTAGGAGCGAGCCGGATATTCCCAGCAAAGGCACA
fcc558568020 Uploaded
greg
parents:
diff changeset
19 ATAGAGTCACTTCGTGCCATGCCTATAGATGCACTTGAAGAAGAATTTCGAGAAAACCATTCATACGAATCTGCTGTTAC
fcc558568020 Uploaded
greg
parents:
diff changeset
20 AGGAAAGGAACTAATGCCGTCTGTTACGACTCGTGCACCATTTTCACAGATCAAC
fcc558568020 Uploaded
greg
parents:
diff changeset
21 >contig_9
fcc558568020 Uploaded
greg
parents:
diff changeset
22 CTTCGGTTAAAGGCAGATGAGGAGGCACAATGTTTGAATCAGATGCAGCGTATCATTTTTGATGAAATTATGGAGCATGT
fcc558568020 Uploaded
greg
parents:
diff changeset
23 GGAGTTAGAAAAGGGGGGCTTCTATTTCGTATATCGCCCTGGGGGCAACGGAAAGACCTTGTGGTTGGCTATTATCTCAA
fcc558568020 Uploaded
greg
parents:
diff changeset
24 AACTGAGAAGCGAGGGTAGAATAGTTCTCGCAGTGGCTTCATCAGGTATAGCATTGCTTTTGGTTGAGGGTGGTAGAACA
fcc558568020 Uploaded
greg
parents:
diff changeset
25 GCCCATTCTCGATTTAAAATACCCATAGATGTCAATGAATATAACAATTGTGAAATTAAACAGAACATCTACCTCGCTGA
fcc558568020 Uploaded
greg
parents:
diff changeset
26 ACTTATATGTCACACCAATTTGGTCATTTGGGATGAGGCACCTATGACTCAATATTTTGTCTTTGAGGCGGTT