Mercurial > repos > greg > plant_tribes_assembly_post_processor
comparison test-data/transcripts_tgf.pep @ 0:fcc558568020 draft
Uploaded
| author | greg |
|---|---|
| date | Thu, 08 Jun 2017 12:44:09 -0400 |
| parents | |
| children | 4d73965d99a2 |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:fcc558568020 |
|---|---|
| 1 >Gene.1::contig_1::g.1::m.1 type:internal len:115 gc:universal contig_1:344-3(-) | |
| 2 KKLYGDKEDILVPDIFWDYTSGKVLTMEWVEGVKLNEQDAVESQGLSVLDLVNTGIQCSLRQLLEYGYFHADPHPGNLLATPDGKLAFLDFGMMSETPEQARSAIIGHVVHMVN | |
| 3 >Gene.2::contig_2::g.2::m.2 type:5prime_partial len:170 gc:universal contig_2:2-511(+) | |
| 4 LSKVPIPSNNIYAINDKKSPEDAADDYENRLKELVSEKIIPVSTISGFPKFDLMLLGMGPDGHVASLFPSHMQRYEKEKWVTFITDSPKPPPSRITFTFPMINSASEIAMVVTGADLAGTTKIALGTTGNVKPGETPLPCTEVSAEGEVTWFLDKDAASQLLNYVRFDD* | |
| 5 >Gene.3::contig_3::g.3::m.3 type:5prime_partial len:126 gc:universal contig_3:463-86(-) | |
| 6 VDEGVVVAGLSEQEKASVSEILTTARAHSETIENLKRDHSQQVSCIEQHTNDTFRQKYMDYEPTGSTPVRSEPDIPSKGTIESLRAMPIDALEEEFRENHSYESAVTGKELMPSVTTRAPFSQIN* | |
| 7 >Gene.4::contig_9::g.4::m.4 type:internal len:132 gc:universal contig_9:2-394(+) | |
| 8 LRLKADEEAQCLNQMQRIIFDEIMEHVELEKGGFYFVYRPGGNGKTLWLAIISKLRSEGRIVLAVASSGIALLLVEGGRTAHSRFKIPIDVNEYNNCEIKQNIYLAELICHTNLVIWDEAPMTQYFVFEAV | |
| 9 >Gene.5::contig_11::g.5::m.5 type:5prime_partial len:108 gc:universal contig_11:2-325(+) | |
| 10 IYGKGIQNMRTLWGGVAPESPVVVVGGGVTPESPVVGGIVLGSPAVLLKSDLLQALPPRLLKSALFQNLPSPLLKSGLLHDIPSELLRISRCCCCSRCCSRNSRCGY* | |
| 11 >Gene.6::contig_11::g.6::m.6 type:5prime_partial len:100 gc:universal contig_11:443-144(-) | |
| 12 AAKVTVAPGSRVAAAGSGVASESPATAEAGVAPGSPAVDFNSHSGSFWSNTDCSSNNGRFGATPTGYHGATPTSTVATGDFGTTPTSGAAVGELGVNPT* | |
| 13 >Gene.7::contig_18::g.7::m.7 type:internal len:143 gc:universal contig_18:426-1(-) | |
| 14 TEVRRWNKQEDWGRKTWKEAKESTLPKIVGEGIYGVGPILAALSSGRRELYALYVQEGLDLSSNSKKKDKKRFERVLKMVEKIGLSKKEVSKHDLNMVVDNRPHQGLLLDASALEMVSIKELDPVSIDGEKCPLWLALDEVT | |
| 15 >Gene.8::contig_20::g.8::m.8 type:internal len:104 gc:universal contig_20:1-309(+) | |
| 16 GLRIDAHGYALQDWQRDLFQLDLVLHDEPSPRTRSILLLPADIVHADACHVDALPHYWIRFAYTVAGHGSRSYPYPCAGHLHWFRHSYPLHVGLVSLDQLLGS | |
| 17 >Gene.9::contig_20::g.9::m.9 type:internal len:103 gc:universal contig_20:2-307(+) | |
| 18 AYASMLTDMPYKIGNAICFNLILYFMTNLRREPGAFFFFLLISFTLTLVMSMLFRTIGSVSRTLSQAMAPAAILILALVIYTGFVIPTRYMLGWSRWINYLD | |
| 19 >Gene.10::contig_20::g.10::m.10 type:internal len:103 gc:universal contig_20:307-2(-) | |
| 20 IQVVDPTRPAQHVAGRNDETSVNDQRKDKDSCGSHGLRQCTRNGSNSAEEHRHDKRQRERYQQEEEECSWFAAKVRHEVQDQVETDRVANLVGHIREHRCVS | |
| 21 >Gene.11::contig_21::g.11::m.11 type:5prime_partial len:168 gc:universal contig_21:519-16(-) | |
| 22 VSIVNQEPVLFSVSIGENIAYGLPDDYVSKVDVIKAAKAANAHEFIIALPQGYDTLVGERGGLLSGGQRQRVAIARALLKNAPILILDEATSALDAVSERLVQDALNRLMKGRTTLVIAHRLSTVQNADQIALCSDGKISELGTHSELLEQKGLYASLVGTQRLAFE* | |
| 23 >Gene.12::contig_24::g.12::m.12 type:internal len:111 gc:universal contig_24:331-2(-) | |
| 24 KTRELEIEQILLKSKDLESELESKGSMFIKETEALVAENSKLSQELGAFKSELNDIQMKLNVVSSEKDGTVEELTSARKEIEELTQKLASEGQKLQSQISSIMEENNLLN | |
| 25 >Gene.13::contig_29::g.13::m.13 type:3prime_partial len:267 gc:universal contig_29:52-849(+) | |
| 26 MKKSKLLQNSKDLLSRSFNPAKCKTSLRLAGSRLKLLRNKKEVQLKQMKREIAQLLESGQDQTARIRVEHLIREEKMMAAYDLLDIYCELVVARLPVIESQKNCPIDLKEAIASLVFAAPRCGDVPEFLDARKQFSAKYGKDFTTAATELRPQCGVGRMLVEKLSATAPDVQSKTKILNAIAEEHNVKWEPTSFGENDSAPLNDRLTGPSSFTKEREQYPEPPHFEAVQVQAHPSNNTLHSSPSNSSQQDDRTSVFVETSTFKTPS | |
| 27 >Gene.14::contig_30::g.14::m.14 type:internal len:160 gc:universal contig_30:1-477(+) | |
| 28 KASGLFSSKDSVDSTDSHMENVCSDILSMSINKNQILENGHVHNNRGAAIFELSGAATNVIEDVGLSDVQSDTRLGMASQVCQVDMHEPEGGLLSFKNQRFKDAEVATNITHDYCHVSHLLKHSNVQVPKYISGNGSATVDLNRQTVDRNNNFKVSTSN | |
| 29 >Gene.15::contig_31::g.15::m.15 type:3prime_partial len:263 gc:universal contig_31:787-2(-) | |
| 30 MTRSRPHIEKLESRVSQDDLLEGTCARTRPLSYDEIMLGRNNKGDAGKEVASGSGVADSASGHGDIEKISNFPEYHRQINEVSERMDVRHTSNDFQKVSCRRKVDSKNDNLVQDKDEKYRESGVKLKSIWEKTEGSKRVREGENERRHYSNRKRDGHLGVDSYNGSNKRQARESYRKGKTSERGRVKSEIDRKQLVNDEGQVHRKRKTERRMSSDSEKEYKRRDERNVMHTERLTNRGSQKSEKENRRKRHNEEDKTKSLST | |
| 31 >Gene.16::contig_33::g.16::m.16 type:internal len:206 gc:universal contig_33:615-1(-) | |
| 32 EEINEVVAFLQNPRAFQEMGARAPRGVLIVGEIGTGKTSLAMAIAAEAKVPLVEVKAQQLEAGLFVGQGASNVRELFQAARDLAPVIIFVEDFDLFAGVRGKDLQTKKLDHESFINQLLVELDGFEKQDGVVLMATTRNLKQIDGALLRPGRMDRIFHLQRLTQAERRKILLLAAKESMDEELIDFVDWQKVAEKTALLRPIELK | |
| 33 >Gene.17::contig_35::g.17::m.17 type:internal len:131 gc:universal contig_35:2-391(+) | |
| 34 IHSLLFHLEIVYLLQIDMSMLYRGISRKDKPRGRQHGLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMSEEEITRMIAEVDKDGSGAIDFDEFCHMMTAKFGERDTKEELTKAFQIIDKDQ |