# HG changeset patch # User greg # Date 1535636424 14400 # Node ID c197d5306cd62d957f6fe5faf66898cf8691d024 # Parent 2732db7dd0ef1d84d25ffe292a892ef33331d75e Uploaded diff -r 2732db7dd0ef -r c197d5306cd6 assembly_post_processor.xml --- a/assembly_post_processor.xml Thu Dec 21 09:13:41 2017 -0500 +++ b/assembly_post_processor.xml Thu Aug 30 09:40:24 2018 -0400 @@ -6,6 +6,7 @@ plant_tribes_assembly_post_processor +


     
                     
                         
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diff -r 2732db7dd0ef -r c197d5306cd6 get_clustering_methods.py
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/get_clustering_methods.py	Thu Aug 30 09:40:24 2018 -0400
@@ -0,0 +1,12 @@
+import os
+
+
+def get_clustering_method_options(file_path):
+    options = []
+    if not os.path.isdir(file_path):
+        return options
+    methods_dir = os.path.join(file_path, "alns")
+    for i, file_name in enumerate(os.listdir(methods_dir)):
+        full_path = os.path.join(file_path, file_name)
+        options.append((file_name, full_path, i == 0))
+    return options
diff -r 2732db7dd0ef -r c197d5306cd6 macros.xml
--- a/macros.xml	Thu Dec 21 09:13:41 2017 -0500
+++ b/macros.xml	Thu Aug 30 09:40:24 2018 -0400
@@ -2,16 +2,16 @@
 
     1.0
     
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