view test-data/proteins.both.22Gv1.1.bestOrthos.summary @ 3:3e10a2683769 draft

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date Mon, 30 Oct 2017 09:52:34 -0400
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Gene ID	Orthogroup ID	Arabidopsis thaliana	Thellungiella parvula	Carica papaya	Theobroma cacao	Populus trichocarpa	Fragaria vesca	Glycine max	Medicago truncatula	Vitis vinifera	Solanum lycopersicum	Solanum tuberosum	Mimulus guttatus	Nelumbo nucifera	Aquilegia coerulea	Oryza sativa	Brachypodium distachyon	Sorghum bicolor	Musa acuminata	Phoenix dactylifera	Amborella trichopoda	Selaginella moellendorffii	Physcomitrella patens	SuperOthogroup I1.2	SuperOthogroup I1.5	SuperOthogroup I1.8	SuperOthogroup I2.0	SuperOthogroup I2.5	SuperOthogroup I3.0	SuperOthogroup I3.5	SuperOthogroup I4.0	SuperOthogroup I4.5	SuperOthogroup I5.0	AHRD Descriptions	TAIR Gene(s) Descriptions	Pfam Domains	InterProScan Descriptions	GO Molecular Functions	GO Biological Processes	GO Cellular Components
contig_1	5235	1	1	1	1	1	1	6	1	1	1	3	1	1	1	2	1	1	2	1	1	1	1	2	207	198	330	347	338	461	452	558	557	Protein kinase superfamily protein [1.000]	Protein kinase superfamily protein	ABC1 (PF03109) [0.968] | APH (PF01636) [0.161]	UbiB domain (IPR004147) [0.968] | Aminoglycoside phosphotransferase (IPR002575) [0.161]	NULL / Representative annotation below 0.1%	NULL / Representative annotation below 0.1%	NULL / Representative annotation below 0.1%
contig_10	3494	1	1	1	1	3	1	4	1	0	1	1	1	3	1	3	5	3	3	4	1	0	0	96	177	236	239	529	538	532	524	780	779	RING/U-box superfamily protein [1.000]	RING/U-box superfamily protein	zf-C3HC4_2 (PF13923) [0.949] | zf-RING_5 (PF14634) [0.026]	Zinc finger, RING-type (IPR001841) [0.026]	protein binding (GO:0005515) [0.026] | zinc ion binding (GO:0008270) [0.026]	NULL / Representative annotation below 0.1%	NULL / Representative annotation below 0.1%
contig_2	38889	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	489	741	746	752	773	800	798	1128	1403	1407	6-phosphogluconolactonase 5 [0.500] | 6-phosphogluconolactonase 2 [0.500]	Unkown protein(s) / No TAIR description(s)	Glucosamine_iso (PF01182) [1.000]	Glucosamine/galactosamine-6-phosphate isomerase (IPR006148) [1.000]	NULL / Representative annotation below 0.1%	carbohydrate metabolic process (GO:0005975) [1.000]	NULL / Representative annotation below 0.1%