Mercurial > repos > greg > plant_tribes_gene_family_phylogeny_builder
comparison gene_family_phylogeny_builder.xml @ 9:ea8cbe5a8cd0 draft
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author | greg |
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date | Thu, 30 Aug 2018 09:48:36 -0400 |
parents | 994e90ae9217 |
children | 800402ed6eb7 |
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8:994e90ae9217 | 9:ea8cbe5a8cd0 |
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4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
5 </macros> | 5 </macros> |
6 <requirements> | 6 <requirements> |
7 <requirement type="package" version="1.0.3">plant_tribes_gene_family_phylogeny_builder</requirement> | 7 <requirement type="package" version="1.0.3">plant_tribes_gene_family_phylogeny_builder</requirement> |
8 </requirements> | 8 </requirements> |
9 <code file="get_clustering_methods.py"/> | |
9 <command detect_errors="exit_code"><![CDATA[ | 10 <command detect_errors="exit_code"><![CDATA[ |
10 #set input_dir = 'input_dir' | 11 #set input_dir = 'input_dir' |
11 #set tree_inference = $tree_inference_cond.tree_inference | 12 #set tree_inference = $tree_inference_cond.tree_inference |
12 #if str($tree_inference) == 'raxml': | 13 #if str($tree_inference) == 'raxml': |
13 #set scaffold = $tree_inference_cond.scaffold | 14 #set scaffold = $tree_inference_cond.scaffold |