Mercurial > repos > greg > plant_tribes_gene_family_scaffold_loader
comparison gene_family_scaffold_loader.xml @ 1:794951c24c86 draft
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| author | greg |
|---|---|
| date | Mon, 01 Oct 2018 13:36:28 -0400 |
| parents | 6282484a52bc |
| children |
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| 0:6282484a52bc | 1:794951c24c86 |
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| 5 </macros> | 5 </macros> |
| 6 <command detect_errors="exit_code"><![CDATA[ | 6 <command detect_errors="exit_code"><![CDATA[ |
| 7 python '$__tool_directory__/gene_family_scaffold_loader.py' | 7 python '$__tool_directory__/gene_family_scaffold_loader.py' |
| 8 --database_connection_string '$__app__.config.plant_tribes_database_connection' | 8 --database_connection_string '$__app__.config.plant_tribes_database_connection' |
| 9 --output '$output' | 9 --output '$output' |
| 10 --scaffold_path '$GALAXY_DATA_INDEX_DIR/plant_tribes/scaffolds/$scaffold' | 10 --scaffold_path '$GALAXY_DATA_INDEX_DIR/plant_tribes/scaffolds/$scaffold']]></command> |
| 11 --output '$output']]></command> | |
| 12 <inputs> | 11 <inputs> |
| 13 <expand macro="param_scaffold" /> | 12 <expand macro="param_scaffold" /> |
| 14 </inputs> | 13 </inputs> |
| 15 <outputs> | 14 <outputs> |
| 16 <data name="output" format="txt"/> | 15 <data name="output" format="txt"/> |