annotate test-data/test8_result.tab @ 0:5367786dc871 draft default tip

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author greg
date Tue, 14 Mar 2023 15:21:14 +0000
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1 Assembly test8_fasta
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2 # contigs (>= 0 bp) 50
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3 # contigs (>= 1000 bp) 50
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4 Total length (>= 0 bp) 255882
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5 Total length (>= 1000 bp) 255882
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6 # contigs 50
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7 Largest contig 14050
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8 Total length 255882
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9 Reference length 4995681
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10 N50 5163
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11 N75 4420
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12 L50 18
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13 L75 31
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14 # misassemblies 0
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15 # misassembled contigs 0
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16 Misassembled contigs length 0
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17 # local misassemblies 0
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18 # scaffold gap ext. mis. 0
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19 # scaffold gap loc. mis. 0
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20 # unaligned mis. contigs 1
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21 # unaligned contigs 49 + 1 part
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22 Unaligned length 254490
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23 Genome fraction (%) 0.027
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24 Duplication ratio 1.031
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25 # N's per 100 kbp 0.00
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26 # mismatches per 100 kbp 444.44
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27 # indels per 100 kbp 2888.89
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28 Largest alignment 657
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29 Total aligned length 1392