diff test-data/test10_tabular_report.tab @ 0:5367786dc871 draft default tip

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test10_tabular_report.tab	Tue Mar 14 15:21:14 2023 +0000
@@ -0,0 +1,77 @@
+Assembly	contig1	contig2
+# contigs (>= 0 bp)	3	1
+# contigs (>= 1000 bp)	3	1
+Total length (>= 0 bp)	6710	6650
+Total length (>= 1000 bp)	6710	6650
+# contigs	3	1
+Largest contig	3980	6650
+Total length	6710	6650
+Reference length	-	-
+Estimated reference length	-	-
+GC (%)	51.28	52.00
+Reference GC (%)	-	-
+N50	3980	6650
+NG50	-	-
+N80	1610	6650
+NG80	-	-
+auN	2934.0	6650.0
+auNG	-	-
+L50	1	1
+LG50	-	-
+L80	2	1
+LG80	-	-
+# total reads	-	-
+# left	-	-
+# right	-	-
+Mapped (%)	-	-
+Reference mapped (%)	-	-
+Properly paired (%)	-	-
+Reference properly paired (%)	-	-
+Avg. coverage depth	-	-
+Reference avg. coverage depth	-	-
+Coverage >= 1x (%)	-	-
+Reference coverage >= 1x (%)	-	-
+# large blocks misassemblies	-	-
+# misassemblies	-	-
+# misassembled contigs	-	-
+Misassembled contigs length	-	-
+# local misassemblies	-	-
+# scaffold gap ext. mis.	-	-
+# scaffold gap loc. mis.	-	-
+# structural variations	-	-
+# possible TEs	-	-
+# unaligned mis. contigs	-	-
+# unaligned contigs	-	-
+Unaligned length	-	-
+Genome fraction (%)	-	-
+Duplication ratio	-	-
+Avg contig read support	-	-
+# N's per 100 kbp	0.00	0.00
+# mismatches per 100 kbp	-	-
+# indels per 100 kbp	-	-
+# genomic features	-	-
+# operons	-	-
+Complete BUSCO (%)	-	-
+Partial BUSCO (%)	-	-
+# predicted genes (unique)	-	-
+# predicted genes (>= 0 bp)	-	-
+# predicted genes (>= 300 bp)	-	-
+# predicted genes (>= 1500 bp)	-	-
+# predicted genes (>= 3000 bp)	-	-
+# predicted rRNA genes	-	-
+Largest alignment	-	-
+Total aligned length	-	-
+NA50	-	-
+NGA50	-	-
+NA80	-	-
+NGA80	-	-
+auNA	-	-
+auNGA	-	-
+LA50	-	-
+LGA50	-	-
+LA80	-	-
+LGA80	-	-
+K-mer-based compl. (%)	-	-
+K-mer-based cor. length (%)	-	-
+K-mer-based mis. length (%)	-	-
+# k-mer-based misjoins	-	-