annotate unique_mlg_id.xml @ 1:6c10123cb4a7 draft default tip

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author greg
date Wed, 11 Dec 2024 16:28:27 +0000
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1 <tool id="unique_mlg_id" name="Unique MLG IDs" version="1.0.0">
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2 <description></description>
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3 <command detect_errors="exit_code"><![CDATA[
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4 python $__tool_directory__/unique_mlg_id.py
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5 --database_connection_string '$__app__.config.corals_database_connection'
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6 --output '$output'
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7 ]]></command>
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8 <inputs>
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9 </inputs>
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10 <outputs>
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11 <data name="output" format="tabular"/>
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12 </outputs>
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13 <tests>
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14 <test>
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15 <!--Testing this tool is a bit difficult at the current time.-->
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16 </test>
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17 </tests>
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18 <help>
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19 **What it does**
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20
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21 Queries the corals (stag) database to retrieve the unique corals multi-locus genotype representative sample ids.
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22 </help>
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23 <citations>
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24 <citation type="doi">https://doi.org/10.1038/s41598-020-69101-z</citation>
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25 </citations>
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26 </tool>
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