# HG changeset patch # User greg # Date 1732547447 0 # Node ID 53b1163ce9c0b707ab55708df89b992b7fcb69d7 # Parent e3d8b5bfdc11a4230a798d6847d82394d98e6bf2 Uploaded diff -r e3d8b5bfdc11 -r 53b1163ce9c0 update_stag_database.py --- a/update_stag_database.py Thu Jul 15 20:34:30 2021 +0000 +++ b/update_stag_database.py Mon Nov 25 15:10:47 2024 +0000 @@ -14,12 +14,10 @@ from six.moves import configparser -from sqlalchemy import MetaData from sqlalchemy import create_engine from sqlalchemy.engine.url import make_url now = datetime.datetime.utcnow -metadata = MetaData() DEFAULT_MISSING_NUMERIC_VALUE = -9.000000 @@ -159,7 +157,6 @@ self.outfh = open(self.args.output, "w") self.connect_db() self.engine = create_engine(self.args.database_connection_string) - self.metadata = MetaData(self.engine) self.affy_ids = [] self.allele_ids = [] self.colony_ids = []