Mercurial > repos > greg > vsnp_add_zero_coverage
annotate macros.xml @ 11:fdfcdc9548ec draft
"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_add_zero_coverage commit 4c7078b27931895d469b0e9663cc11a925eaf1bd"
author | greg |
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date | Fri, 12 Nov 2021 16:09:39 +0000 |
parents | 27e7f5ade3ea |
children | fe12add47a23 |
rev | line source |
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2 | 1 <?xml version='1.0' encoding='UTF-8'?> |
2 <macros> | |
3 <token name="@WRAPPER_VERSION@">1.0</token> | |
7 | 4 <token name="@PROFILE@">20.09</token> |
5 <xml name="biopython_requirement"> | |
6 <requirement type="package" version="1.79">biopython</requirement> | |
7 </xml> | |
8 <xml name="numpy_requirement"> | |
9 <requirement type="package" version="1.21.1">numpy</requirement> | |
10 </xml> | |
11 <xml name="openpyxl_requirement"> | |
12 <requirement type="package" version="3.0.7">openpyxl</requirement> | |
13 </xml> | |
14 <xml name="pandas_requirement"> | |
15 <requirement type="package" version="1.3.0">pandas</requirement> | |
16 </xml> | |
17 <xml name="pysam_requirement"> | |
18 <requirement type="package" version="0.15.4">pysam</requirement> | |
19 </xml> | |
10
27e7f5ade3ea
"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_add_zero_coverage commit 60f0060645f11d67acb4c0941c61eb21d4b12042"
greg
parents:
9
diff
changeset
|
20 <xml name="pyvcf_requirement"> |
27e7f5ade3ea
"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_add_zero_coverage commit 60f0060645f11d67acb4c0941c61eb21d4b12042"
greg
parents:
9
diff
changeset
|
21 <requirement type="package" version="0.6.8">pyvcf</requirement> |
27e7f5ade3ea
"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_add_zero_coverage commit 60f0060645f11d67acb4c0941c61eb21d4b12042"
greg
parents:
9
diff
changeset
|
22 </xml> |
7 | 23 <xml name="pyyaml_requirement"> |
9 | 24 <requirement type="package" version="5.4.1">pyyaml</requirement> |
7 | 25 </xml> |
26 <xml name="xlrd_requirement"> | |
27 <requirement type="package" version="2.0.1">xlrd</requirement> | |
28 </xml> | |
29 <xml name="xlsxwriter_requirement"> | |
30 <requirement type="package" version="1.4.4">xlsxwriter</requirement> | |
31 </xml> | |
2 | 32 <xml name="param_reference_source"> |
33 <param name="reference_source" type="select" label="Choose the source for the reference genome"> | |
34 <option value="cached" selected="true">locally cached</option> | |
35 <option value="history">from history</option> | |
36 </param> | |
37 </xml> | |
38 <xml name="citations"> | |
39 <citations> | |
40 <citation type="bibtex"> | |
41 @misc{None, | |
42 journal = {None}, | |
43 author = {1. Stuber T}, | |
44 title = {Manuscript in preparation}, | |
45 year = {None}, | |
46 url = {https://github.com/USDA-VS/vSNP},} | |
47 </citation> | |
48 </citations> | |
49 </xml> | |
50 </macros> | |
51 |