comparison vsnp_add_zero_coverage.xml @ 7:127a00fcd4a8 draft

Uploaded

6:bb6cc994707d

    <description></description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <requirements>
        <requirement type="package" version="3.0.7">openpyxl</requirement>
        <requirement type="package" version="1.79">biopython</requirement>
        <requirement type="package" version="1.3.0">pandas</requirement>
        <requirement type="package" version="0.16.0.1">pysam</requirement>
    </requirements>
    <command detect_errors="exit_code"><![CDATA[
#import re

**Required Options**

 * **Choose the source for the reference genome** - select "locally cached" if the reference associated with the BAM and VCF files is available within the Galaxy environment or "from history" to select the reference from the current history.
    </help>
    <expand macro="citations" />
</tool>

7:127a00fcd4a8

    <description></description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <requirements>
        <expand macro="biopython_requirement"/>
        <expand macro="openpyxl_requirement"/>
        <expand macro="pandas_requirement"/>
        <requirement type="package" version="0.16.0.1">pysam</requirement>
    </requirements>
    <command detect_errors="exit_code"><![CDATA[
#import re

**Required Options**

 * **Choose the source for the reference genome** - select "locally cached" if the reference associated with the BAM and VCF files is available within the Galaxy environment or "from history" to select the reference from the current history.
    </help>
    <expand macro="citations"/>
</tool>