|
4
|
1 ##fileformat=VCFv4.2
|
|
|
2 ##FILTER=<ID=LowQual,Description="Low quality">
|
|
|
3 ##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
|
|
|
4 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth (reads with MQ=255 or with bad mates are filtered)">
|
|
|
5 ##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
|
|
|
6 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
|
|
|
7 ##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Normalized, Phred-scaled likelihoods for genotypes as defined in the VCF specification">
|
|
|
8 ##GATKCommandLine.HaplotypeCaller=<ID=HaplotypeCaller,Version=3.8-0-ge9d806836,Date="Mon Dec 25 07:02:10 CST 2017",Epoch=1514206930563,CommandLineOptions="analysis_type=HaplotypeCaller input_file=[/scratch/analysis_staging/a_script/bovis_reanalysis_af2122_2017-12-14/2001-2008/02-5877/02-5877-quality.bam] showFullBamList=false read_buffer_size=null read_filter=[] disable_read_filter=[] intervals=null excludeIntervals=null interval_set_rule=UNION interval_merging=ALL interval_padding=0 reference_sequence=/scratch/analysis_staging/a_script/bovis_reanalysis_af2122_2017-12-14/2001-2008/02-5877/NC_002945v4.fasta nonDeterministicRandomSeed=false disableDithering=false maxRuntime=-1 maxRuntimeUnits=MINUTES downsampling_type=BY_SAMPLE downsample_to_fraction=null downsample_to_coverage=500 baq=OFF baqGapOpenPenalty=40.0 refactor_NDN_cigar_string=false fix_misencoded_quality_scores=false allow_potentially_misencoded_quality_scores=false useOriginalQualities=false defaultBaseQualities=-1 performanceLog=null BQSR=null quantize_quals=0 static_quantized_quals=null round_down_quantized=false disable_indel_quals=false emit_original_quals=false preserve_qscores_less_than=6 globalQScorePrior=-1.0 secondsBetweenProgressUpdates=10 validation_strictness=SILENT remove_program_records=false keep_program_records=false sample_rename_mapping_file=null unsafe=null use_jdk_deflater=false use_jdk_inflater=false disable_auto_index_creation_and_locking_when_reading_rods=false no_cmdline_in_header=false sites_only=false never_trim_vcf_format_field=false bcf=false bam_compression=null simplifyBAM=false disable_bam_indexing=false generate_md5=false num_threads=1 num_cpu_threads_per_data_thread=1 num_io_threads=0 monitorThreadEfficiency=false num_bam_file_handles=null read_group_black_list=null pedigree=[] pedigreeString=[] pedigreeValidationType=STRICT allow_intervals_with_unindexed_bam=false generateShadowBCF=false variant_index_type=DYNAMIC_SEEK variant_index_parameter=-1 reference_window_stop=0 phone_home= gatk_key=null tag=NA logging_level=INFO log_to_file=null help=false version=false out=/scratch/analysis_staging/a_script/bovis_reanalysis_af2122_2017-12-14/2001-2008/02-5877/02-5877-hapall.vcf likelihoodCalculationEngine=PairHMM heterogeneousKmerSizeResolution=COMBO_MIN dbsnp=(RodBinding name= source=UNBOUND) dontTrimActiveRegions=false maxDiscARExtension=25 maxGGAARExtension=300 paddingAroundIndels=150 paddingAroundSNPs=20 comp=[] annotation=[] excludeAnnotation=[] group=[StandardAnnotation, StandardHCAnnotation] debug=false useFilteredReadsForAnnotations=false emitRefConfidence=NONE bamWriterType=CALLED_HAPLOTYPES emitDroppedReads=false disableOptimizations=false annotateNDA=false useNewAFCalculator=false heterozygosity=0.001 indel_heterozygosity=1.25E-4 heterozygosity_stdev=0.01 standard_min_confidence_threshold_for_calling=10.0 standard_min_confidence_threshold_for_emitting=30.0 max_alternate_alleles=6 max_genotype_count=1024 max_num_PL_values=100 input_prior=[] sample_ploidy=2 genotyping_mode=DISCOVERY alleles=(RodBinding name= source=UNBOUND) contamination_fraction_to_filter=0.0 contamination_fraction_per_sample_file=null p_nonref_model=null exactcallslog=null output_mode=EMIT_VARIANTS_ONLY allSitePLs=false gcpHMM=10 pair_hmm_implementation=FASTEST_AVAILABLE phredScaledGlobalReadMismappingRate=45 noFpga=false nativePairHmmThreads=1 useDoublePrecision=false sample_name=null kmerSize=[10, 25] dontIncreaseKmerSizesForCycles=false allowNonUniqueKmersInRef=true numPruningSamples=1 recoverDanglingHeads=false doNotRecoverDanglingBranches=false minDanglingBranchLength=4 consensus=false maxNumHaplotypesInPopulation=128 errorCorrectKmers=false minPruning=2 debugGraphTransformations=false allowCyclesInKmerGraphToGeneratePaths=false graphOutput=null kmerLengthForReadErrorCorrection=25 minObservationsForKmerToBeSolid=20 GVCFGQBands=[1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 70, 80, 90, 99] indelSizeToEliminateInRefModel=10 min_base_quality_score=10 includeUmappedReads=false useAllelesTrigger=false doNotRunPhysicalPhasing=true keepRG=null justDetermineActiveRegions=false dontGenotype=false dontUseSoftClippedBases=true captureAssemblyFailureBAM=false errorCorrectReads=false pcr_indel_model=CONSERVATIVE maxReadsInRegionPerSample=10000 minReadsPerAlignmentStart=10 mergeVariantsViaLD=false activityProfileOut=null activeRegionOut=null activeRegionIn=null activeRegionExtension=null forceActive=false activeRegionMaxSize=null bandPassSigma=null maxReadsInMemoryPerSample=30000 maxTotalReadsInMemory=10000000 maxProbPropagationDistance=50 activeProbabilityThreshold=0.002 min_mapping_quality_score=20 filter_reads_with_N_cigar=false filter_mismatching_base_and_quals=false filter_bases_not_stored=false">
|
|
|
9 ##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes, for each ALT allele, in the same order as listed">
|
|
|
10 ##INFO=<ID=AF,Number=A,Type=Float,Description="Allele Frequency, for each ALT allele, in the same order as listed">
|
|
|
11 ##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
|
|
|
12 ##INFO=<ID=BaseQRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt Vs. Ref base qualities">
|
|
|
13 ##INFO=<ID=ClippingRankSum,Number=1,Type=Float,Description="Z-score From Wilcoxon rank sum test of Alt vs. Ref number of hard clipped bases">
|
|
|
14 ##INFO=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth; some reads may have been filtered">
|
|
|
15 ##INFO=<ID=DS,Number=0,Type=Flag,Description="Were any of the samples downsampled?">
|
|
|
16 ##INFO=<ID=ExcessHet,Number=1,Type=Float,Description="Phred-scaled p-value for exact test of excess heterozygosity">
|
|
|
17 ##INFO=<ID=FS,Number=1,Type=Float,Description="Phred-scaled p-value using Fisher's exact test to detect strand bias">
|
|
|
18 ##INFO=<ID=HaplotypeScore,Number=1,Type=Float,Description="Consistency of the site with at most two segregating haplotypes">
|
|
|
19 ##INFO=<ID=InbreedingCoeff,Number=1,Type=Float,Description="Inbreeding coefficient as estimated from the genotype likelihoods per-sample when compared against the Hardy-Weinberg expectation">
|
|
|
20 ##INFO=<ID=MLEAC,Number=A,Type=Integer,Description="Maximum likelihood expectation (MLE) for the allele counts (not necessarily the same as the AC), for each ALT allele, in the same order as listed">
|
|
|
21 ##INFO=<ID=MLEAF,Number=A,Type=Float,Description="Maximum likelihood expectation (MLE) for the allele frequency (not necessarily the same as the AF), for each ALT allele, in the same order as listed">
|
|
|
22 ##INFO=<ID=MQ,Number=1,Type=Float,Description="RMS Mapping Quality">
|
|
|
23 ##INFO=<ID=MQRankSum,Number=1,Type=Float,Description="Z-score From Wilcoxon rank sum test of Alt vs. Ref read mapping qualities">
|
|
|
24 ##INFO=<ID=QD,Number=1,Type=Float,Description="Variant Confidence/Quality by Depth">
|
|
|
25 ##INFO=<ID=ReadPosRankSum,Number=1,Type=Float,Description="Z-score from Wilcoxon rank sum test of Alt vs. Ref read position bias">
|
|
|
26 ##INFO=<ID=SOR,Number=1,Type=Float,Description="Symmetric Odds Ratio of 2x2 contingency table to detect strand bias">
|
|
|
27 ##contig=<ID=NC_002945.4,length=4349904>
|
|
|
28 ##reference=file:///scratch/analysis_staging/a_script/bovis_reanalysis_af2122_2017-12-14/2001-2008/02-5877/NC_002945v4.fasta
|
|
|
29 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT 02-5877
|
|
|
30 NC_002945.4 1057 . A G 9550.77 . AC=2;AF=1.00;AN=2;DP=314;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,313:313:99:9579,932,0
|
|
|
31 NC_002945.4 8741 . T C 6602.77 . AC=2;AF=1.00;AN=2;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.21;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,205:205:99:6631,612,0
|
|
|
32 NC_002945.4 33788 . A G 5351.77 . AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.24;SOR=5.203 GT:AD:DP:GQ:PL 1/1:0,128:128:99:5380,384,0
|
|
|
33 NC_002945.4 41437 . T C 3949.77 . AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=1.078 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3978,359,0
|
|
|
34 NC_002945.4 67098 . G A 7682.77 . AC=2;AF=1.00;AN=2;DP=239;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=1.095 GT:AD:DP:GQ:PL 1/1:0,239:239:99:7711,717,0
|
|
|
35 NC_002945.4 69913 . T C 9898.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.899;ClippingRankSum=0.000;DP=307;ExcessHet=3.0103;FS=3.379;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.24;ReadPosRankSum=-0.587;SOR=0.502 GT:AD:DP:GQ:PL 1/1:1,306:307:99:9927,877,0
|
|
|
36 NC_002945.4 103928 . G C 3252.77 . AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.51;QD=30.63;SOR=2.334 GT:AD:DP:GQ:PL 1/1:0,75:75:99:3281,226,0
|
|
|
37 NC_002945.4 103931 . G C 3261.77 . AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.21;QD=29.09;SOR=2.365 GT:AD:DP:GQ:PL 1/1:0,76:76:99:3290,228,0
|
|
|
38 NC_002945.4 104264 . A G 182.90 . AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=37.76;QD=32.93;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:211,15,0
|
|
|
39 NC_002945.4 119328 . G T 8863.77 . AC=2;AF=1.00;AN=2;DP=279;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,279:279:99:8892,834,0
|
|
|
40 NC_002945.4 127447 . G C 7408.77 . AC=2;AF=1.00;AN=2;DP=229;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,227:227:99:7437,679,0
|
|
|
41 NC_002945.4 130237 . T C 9361.77 . AC=2;AF=1.00;AN=2;DP=283;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,283:283:99:9390,847,0
|
|
|
42 NC_002945.4 152355 . G T 5940.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;ClippingRankSum=0.000;DP=218;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.25;ReadPosRankSum=-0.430;SOR=0.238 GT:AD:DP:GQ:PL 1/1:1,217:218:99:5969,634,0
|
|
|
43 NC_002945.4 159370 . A G 6878.77 . AC=2;AF=1.00;AN=2;DP=210;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,210:210:99:6907,630,0
|
|
|
44 NC_002945.4 160535 . T C 8614.77 . AC=2;AF=1.00;AN=2;DP=283;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.44;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,283:283:99:8643,842,0
|
|
|
45 NC_002945.4 165799 . G A 6660.77 . AC=2;AF=1.00;AN=2;DP=217;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.69;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,217:217:99:6689,648,0
|
|
|
46 NC_002945.4 166696 . A G 5785.77 . AC=2;AF=1.00;AN=2;DP=181;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.97;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,181:181:99:5814,541,0
|
|
|
47 NC_002945.4 180444 . T C 8717.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.738;ClippingRankSum=0.000;DP=293;ExcessHet=3.0103;FS=3.957;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.96;ReadPosRankSum=2.313;SOR=0.911 GT:AD:DP:GQ:PL 1/1:1,290:291:99:8746,855,0
|
|
|
48 NC_002945.4 232188 . G C 4226.77 . AC=2;AF=1.00;AN=2;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=1.194 GT:AD:DP:GQ:PL 1/1:0,149:149:99:4255,441,0
|
|
|
49 NC_002945.4 246207 . C T 6840.77 . AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,219:219:99:6869,655,0
|
|
|
50 NC_002945.4 294329 . G A 8025.77 . AC=2;AF=1.00;AN=2;DP=260;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=1.665 GT:AD:DP:GQ:PL 1/1:0,259:259:99:8054,772,0
|
|
|
51 NC_002945.4 295519 . T C 7467.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.437;ClippingRankSum=0.000;DP=235;ExcessHet=3.0103;FS=3.066;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.78;ReadPosRankSum=1.967;SOR=0.278 GT:AD:DP:GQ:PL 1/1:1,234:235:99:7496,664,0
|
|
|
52 NC_002945.4 306695 . N . . . . GT ./.
|
|
|
53 NC_002945.4 306696 . N . . . . GT ./.
|
|
|
54 NC_002945.4 306697 . N . . . . GT ./.
|
|
|
55 NC_002945.4 306698 . N . . . . GT ./.
|
|
|
56 NC_002945.4 306699 . N . . . . GT ./.
|
|
|
57 NC_002945.4 306700 . N . . . . GT ./.
|
|
|
58 NC_002945.4 306701 . N . . . . GT ./.
|
|
|
59 NC_002945.4 306702 . N . . . . GT ./.
|
|
|
60 NC_002945.4 306703 . N . . . . GT ./.
|
|
|
61 NC_002945.4 306704 . N . . . . GT ./.
|
|
|
62 NC_002945.4 306705 . N . . . . GT ./.
|
|
|
63 NC_002945.4 306706 . N . . . . GT ./.
|
|
|
64 NC_002945.4 306707 . N . . . . GT ./.
|
|
|
65 NC_002945.4 306708 . N . . . . GT ./.
|
|
|
66 NC_002945.4 306709 . N . . . . GT ./.
|
|
|
67 NC_002945.4 306710 . N . . . . GT ./.
|
|
|
68 NC_002945.4 324581 . G A 8444.77 . AC=2;AF=1.00;AN=2;DP=276;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,276:276:99:8473,825,0
|
|
|
69 NC_002945.4 327870 . A G 10500.77 . AC=2;AF=1.00;AN=2;DP=339;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,339:339:99:10529,1015,0
|
|
|
70 NC_002945.4 331311 . T C 9339.77 . AC=2;AF=1.00;AN=2;DP=212;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.75;QD=30.83;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,211:211:99:9368,635,0
|
|
|
71 NC_002945.4 331312 . T C 9339.77 . AC=2;AF=1.00;AN=2;DP=212;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.75;QD=29.67;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,211:211:99:9368,635,0
|
|
|
72 NC_002945.4 331333 . C T 9689.77 . AC=2;AF=1.00;AN=2;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.76;QD=34.04;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,219:219:99:9718,665,0
|
|
|
73 NC_002945.4 331336 . T C 9689.77 . AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.76;QD=32.42;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,217:217:99:9718,665,0
|
|
|
74 NC_002945.4 331363 . G A 9337.77 . AC=2;AF=1.00;AN=2;DP=212;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.78;QD=37.76;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,210:210:99:9366,635,0
|
|
|
75 NC_002945.4 331369 . A G 9291.77 . AC=2;AF=1.00;AN=2;DP=211;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.78;QD=27.64;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,209:209:99:9320,632,0
|
|
|
76 NC_002945.4 333331 . N . . . . GT ./.
|
|
|
77 NC_002945.4 333332 . N . . . . GT ./.
|
|
|
78 NC_002945.4 333333 . N . . . . GT ./.
|
|
|
79 NC_002945.4 333334 . N . . . . GT ./.
|
|
|
80 NC_002945.4 333335 . N . . . . GT ./.
|
|
|
81 NC_002945.4 333336 . N . . . . GT ./.
|
|
|
82 NC_002945.4 333337 . N . . . . GT ./.
|
|
|
83 NC_002945.4 333338 . N . . . . GT ./.
|
|
|
84 NC_002945.4 333339 . N . . . . GT ./.
|
|
|
85 NC_002945.4 333340 . N . . . . GT ./.
|
|
|
86 NC_002945.4 333341 . N . . . . GT ./.
|
|
|
87 NC_002945.4 333342 . N . . . . GT ./.
|
|
|
88 NC_002945.4 333343 . N . . . . GT ./.
|
|
|
89 NC_002945.4 333344 . N . . . . GT ./.
|
|
|
90 NC_002945.4 333345 . N . . . . GT ./.
|
|
|
91 NC_002945.4 333346 . N . . . . GT ./.
|
|
|
92 NC_002945.4 333347 . N . . . . GT ./.
|
|
|
93 NC_002945.4 333348 . N . . . . GT ./.
|
|
|
94 NC_002945.4 333349 . N . . . . GT ./.
|
|
|
95 NC_002945.4 333350 . N . . . . GT ./.
|
|
|
96 NC_002945.4 333351 . N . . . . GT ./.
|
|
|
97 NC_002945.4 333352 . N . . . . GT ./.
|
|
|
98 NC_002945.4 333353 . N . . . . GT ./.
|
|
|
99 NC_002945.4 333354 . N . . . . GT ./.
|
|
|
100 NC_002945.4 333355 . N . . . . GT ./.
|
|
|
101 NC_002945.4 333356 . N . . . . GT ./.
|
|
|
102 NC_002945.4 333357 . N . . . . GT ./.
|
|
|
103 NC_002945.4 333358 . N . . . . GT ./.
|
|
|
104 NC_002945.4 333359 . N . . . . GT ./.
|
|
|
105 NC_002945.4 333360 . N . . . . GT ./.
|
|
|
106 NC_002945.4 333361 . N . . . . GT ./.
|
|
|
107 NC_002945.4 333362 . N . . . . GT ./.
|
|
|
108 NC_002945.4 333363 . N . . . . GT ./.
|
|
|
109 NC_002945.4 333364 . N . . . . GT ./.
|
|
|
110 NC_002945.4 333365 . N . . . . GT ./.
|
|
|
111 NC_002945.4 333366 . N . . . . GT ./.
|
|
|
112 NC_002945.4 333367 . N . . . . GT ./.
|
|
|
113 NC_002945.4 333368 . N . . . . GT ./.
|
|
|
114 NC_002945.4 333369 . N . . . . GT ./.
|
|
|
115 NC_002945.4 333370 . N . . . . GT ./.
|
|
|
116 NC_002945.4 333371 . N . . . . GT ./.
|
|
|
117 NC_002945.4 333372 . N . . . . GT ./.
|
|
|
118 NC_002945.4 333373 . N . . . . GT ./.
|
|
|
119 NC_002945.4 333374 . N . . . . GT ./.
|
|
|
120 NC_002945.4 333375 . N . . . . GT ./.
|
|
|
121 NC_002945.4 333376 . N . . . . GT ./.
|
|
|
122 NC_002945.4 333377 . N . . . . GT ./.
|
|
|
123 NC_002945.4 333378 . N . . . . GT ./.
|
|
|
124 NC_002945.4 333379 . N . . . . GT ./.
|
|
|
125 NC_002945.4 333380 . N . . . . GT ./.
|
|
|
126 NC_002945.4 333381 . N . . . . GT ./.
|
|
|
127 NC_002945.4 333382 . N . . . . GT ./.
|
|
|
128 NC_002945.4 333383 . N . . . . GT ./.
|
|
|
129 NC_002945.4 333384 . N . . . . GT ./.
|
|
|
130 NC_002945.4 333385 . N . . . . GT ./.
|
|
|
131 NC_002945.4 333386 . N . . . . GT ./.
|
|
|
132 NC_002945.4 333387 . N . . . . GT ./.
|
|
|
133 NC_002945.4 333388 . N . . . . GT ./.
|
|
|
134 NC_002945.4 333389 . N . . . . GT ./.
|
|
|
135 NC_002945.4 333390 . N . . . . GT ./.
|
|
|
136 NC_002945.4 333391 . N . . . . GT ./.
|
|
|
137 NC_002945.4 333392 . N . . . . GT ./.
|
|
|
138 NC_002945.4 333393 . N . . . . GT ./.
|
|
|
139 NC_002945.4 333394 . N . . . . GT ./.
|
|
|
140 NC_002945.4 333395 . N . . . . GT ./.
|
|
|
141 NC_002945.4 333396 . N . . . . GT ./.
|
|
|
142 NC_002945.4 333397 . N . . . . GT ./.
|
|
|
143 NC_002945.4 333398 . N . . . . GT ./.
|
|
|
144 NC_002945.4 333399 . N . . . . GT ./.
|
|
|
145 NC_002945.4 333400 . N . . . . GT ./.
|
|
|
146 NC_002945.4 333401 . N . . . . GT ./.
|
|
|
147 NC_002945.4 333402 . N . . . . GT ./.
|
|
|
148 NC_002945.4 333403 . N . . . . GT ./.
|
|
|
149 NC_002945.4 333404 . N . . . . GT ./.
|
|
|
150 NC_002945.4 333405 . N . . . . GT ./.
|
|
|
151 NC_002945.4 333406 . N . . . . GT ./.
|
|
|
152 NC_002945.4 333407 . N . . . . GT ./.
|
|
|
153 NC_002945.4 333408 . N . . . . GT ./.
|
|
|
154 NC_002945.4 333409 . N . . . . GT ./.
|
|
|
155 NC_002945.4 333410 . N . . . . GT ./.
|
|
|
156 NC_002945.4 333495 . N . . . . GT ./.
|
|
|
157 NC_002945.4 333496 . N . . . . GT ./.
|
|
|
158 NC_002945.4 333497 . N . . . . GT ./.
|
|
|
159 NC_002945.4 333498 . N . . . . GT ./.
|
|
|
160 NC_002945.4 333499 . N . . . . GT ./.
|
|
|
161 NC_002945.4 333500 . N . . . . GT ./.
|
|
|
162 NC_002945.4 333501 . N . . . . GT ./.
|
|
|
163 NC_002945.4 333502 . N . . . . GT ./.
|
|
|
164 NC_002945.4 333503 . N . . . . GT ./.
|
|
|
165 NC_002945.4 333504 . N . . . . GT ./.
|
|
|
166 NC_002945.4 333505 . N . . . . GT ./.
|
|
|
167 NC_002945.4 333506 . N . . . . GT ./.
|
|
|
168 NC_002945.4 333507 . N . . . . GT ./.
|
|
|
169 NC_002945.4 333508 . N . . . . GT ./.
|
|
|
170 NC_002945.4 333509 . N . . . . GT ./.
|
|
|
171 NC_002945.4 333510 . N . . . . GT ./.
|
|
|
172 NC_002945.4 333511 . N . . . . GT ./.
|
|
|
173 NC_002945.4 333512 . N . . . . GT ./.
|
|
|
174 NC_002945.4 333513 . N . . . . GT ./.
|
|
|
175 NC_002945.4 333514 . N . . . . GT ./.
|
|
|
176 NC_002945.4 333515 . N . . . . GT ./.
|
|
|
177 NC_002945.4 333516 . N . . . . GT ./.
|
|
|
178 NC_002945.4 333517 . N . . . . GT ./.
|
|
|
179 NC_002945.4 333518 . N . . . . GT ./.
|
|
|
180 NC_002945.4 333519 . N . . . . GT ./.
|
|
|
181 NC_002945.4 333520 . N . . . . GT ./.
|
|
|
182 NC_002945.4 333521 . N . . . . GT ./.
|
|
|
183 NC_002945.4 333522 . N . . . . GT ./.
|
|
|
184 NC_002945.4 333523 . N . . . . GT ./.
|
|
|
185 NC_002945.4 333524 . N . . . . GT ./.
|
|
|
186 NC_002945.4 333525 . N . . . . GT ./.
|
|
|
187 NC_002945.4 333526 . N . . . . GT ./.
|
|
|
188 NC_002945.4 333527 . N . . . . GT ./.
|
|
|
189 NC_002945.4 333528 . N . . . . GT ./.
|
|
|
190 NC_002945.4 333529 . N . . . . GT ./.
|
|
|
191 NC_002945.4 333530 . N . . . . GT ./.
|
|
|
192 NC_002945.4 333531 . N . . . . GT ./.
|
|
|
193 NC_002945.4 333532 . N . . . . GT ./.
|
|
|
194 NC_002945.4 333533 . N . . . . GT ./.
|
|
|
195 NC_002945.4 333534 . N . . . . GT ./.
|
|
|
196 NC_002945.4 333535 . N . . . . GT ./.
|
|
|
197 NC_002945.4 333536 . N . . . . GT ./.
|
|
|
198 NC_002945.4 333537 . N . . . . GT ./.
|
|
|
199 NC_002945.4 333538 . N . . . . GT ./.
|
|
|
200 NC_002945.4 333539 . N . . . . GT ./.
|
|
|
201 NC_002945.4 333540 . N . . . . GT ./.
|
|
|
202 NC_002945.4 333541 . N . . . . GT ./.
|
|
|
203 NC_002945.4 333542 . N . . . . GT ./.
|
|
|
204 NC_002945.4 333543 . N . . . . GT ./.
|
|
|
205 NC_002945.4 333544 . N . . . . GT ./.
|
|
|
206 NC_002945.4 333545 . N . . . . GT ./.
|
|
|
207 NC_002945.4 333546 . N . . . . GT ./.
|
|
|
208 NC_002945.4 333606 . N . . . . GT ./.
|
|
|
209 NC_002945.4 333607 . N . . . . GT ./.
|
|
|
210 NC_002945.4 333608 . N . . . . GT ./.
|
|
|
211 NC_002945.4 333609 . N . . . . GT ./.
|
|
|
212 NC_002945.4 333610 . N . . . . GT ./.
|
|
|
213 NC_002945.4 333611 . N . . . . GT ./.
|
|
|
214 NC_002945.4 333612 . N . . . . GT ./.
|
|
|
215 NC_002945.4 333613 . N . . . . GT ./.
|
|
|
216 NC_002945.4 333614 . N . . . . GT ./.
|
|
|
217 NC_002945.4 333615 . N . . . . GT ./.
|
|
|
218 NC_002945.4 333616 . N . . . . GT ./.
|
|
|
219 NC_002945.4 333617 . N . . . . GT ./.
|
|
|
220 NC_002945.4 333618 . N . . . . GT ./.
|
|
|
221 NC_002945.4 333619 . N . . . . GT ./.
|
|
|
222 NC_002945.4 333620 . N . . . . GT ./.
|
|
|
223 NC_002945.4 333621 . N . . . . GT ./.
|
|
|
224 NC_002945.4 333622 . N . . . . GT ./.
|
|
|
225 NC_002945.4 333623 . N . . . . GT ./.
|
|
|
226 NC_002945.4 333624 . N . . . . GT ./.
|
|
|
227 NC_002945.4 333625 . N . . . . GT ./.
|
|
|
228 NC_002945.4 333626 . N . . . . GT ./.
|
|
|
229 NC_002945.4 333627 . N . . . . GT ./.
|
|
|
230 NC_002945.4 333628 . N . . . . GT ./.
|
|
|
231 NC_002945.4 333629 . N . . . . GT ./.
|
|
|
232 NC_002945.4 333630 . N . . . . GT ./.
|
|
|
233 NC_002945.4 333631 . N . . . . GT ./.
|
|
|
234 NC_002945.4 333632 . N . . . . GT ./.
|
|
|
235 NC_002945.4 333633 . N . . . . GT ./.
|
|
|
236 NC_002945.4 333634 . N . . . . GT ./.
|
|
|
237 NC_002945.4 333635 . N . . . . GT ./.
|
|
|
238 NC_002945.4 333636 . N . . . . GT ./.
|
|
|
239 NC_002945.4 333637 . N . . . . GT ./.
|
|
|
240 NC_002945.4 333638 . N . . . . GT ./.
|
|
|
241 NC_002945.4 333639 . N . . . . GT ./.
|
|
|
242 NC_002945.4 333640 . N . . . . GT ./.
|
|
|
243 NC_002945.4 333641 . N . . . . GT ./.
|
|
|
244 NC_002945.4 333642 . N . . . . GT ./.
|
|
|
245 NC_002945.4 333643 . N . . . . GT ./.
|
|
|
246 NC_002945.4 333644 . N . . . . GT ./.
|
|
|
247 NC_002945.4 333645 . N . . . . GT ./.
|
|
|
248 NC_002945.4 333646 . N . . . . GT ./.
|
|
|
249 NC_002945.4 333647 . N . . . . GT ./.
|
|
|
250 NC_002945.4 333648 . N . . . . GT ./.
|
|
|
251 NC_002945.4 333649 . N . . . . GT ./.
|
|
|
252 NC_002945.4 333650 . N . . . . GT ./.
|
|
|
253 NC_002945.4 333651 . N . . . . GT ./.
|
|
|
254 NC_002945.4 333866 . N . . . . GT ./.
|
|
|
255 NC_002945.4 333867 . N . . . . GT ./.
|
|
|
256 NC_002945.4 333868 . N . . . . GT ./.
|
|
|
257 NC_002945.4 333869 . N . . . . GT ./.
|
|
|
258 NC_002945.4 333870 . N . . . . GT ./.
|
|
|
259 NC_002945.4 333871 . N . . . . GT ./.
|
|
|
260 NC_002945.4 333872 . N . . . . GT ./.
|
|
|
261 NC_002945.4 333873 . N . . . . GT ./.
|
|
|
262 NC_002945.4 333874 . N . . . . GT ./.
|
|
|
263 NC_002945.4 333875 . N . . . . GT ./.
|
|
|
264 NC_002945.4 333876 . N . . . . GT ./.
|
|
|
265 NC_002945.4 333877 . N . . . . GT ./.
|
|
|
266 NC_002945.4 333878 . N . . . . GT ./.
|
|
|
267 NC_002945.4 333879 . N . . . . GT ./.
|
|
|
268 NC_002945.4 333880 . N . . . . GT ./.
|
|
|
269 NC_002945.4 333881 . N . . . . GT ./.
|
|
|
270 NC_002945.4 333882 . N . . . . GT ./.
|
|
|
271 NC_002945.4 333883 . N . . . . GT ./.
|
|
|
272 NC_002945.4 333884 . N . . . . GT ./.
|
|
|
273 NC_002945.4 333885 . N . . . . GT ./.
|
|
|
274 NC_002945.4 333886 . N . . . . GT ./.
|
|
|
275 NC_002945.4 333887 . N . . . . GT ./.
|
|
|
276 NC_002945.4 333888 . N . . . . GT ./.
|
|
|
277 NC_002945.4 333889 . N . . . . GT ./.
|
|
|
278 NC_002945.4 333890 . N . . . . GT ./.
|
|
|
279 NC_002945.4 333891 . N . . . . GT ./.
|
|
|
280 NC_002945.4 333892 . N . . . . GT ./.
|
|
|
281 NC_002945.4 333893 . N . . . . GT ./.
|
|
|
282 NC_002945.4 333894 . N . . . . GT ./.
|
|
|
283 NC_002945.4 333895 . N . . . . GT ./.
|
|
|
284 NC_002945.4 333896 . N . . . . GT ./.
|
|
|
285 NC_002945.4 333897 . N . . . . GT ./.
|
|
|
286 NC_002945.4 333898 . N . . . . GT ./.
|
|
|
287 NC_002945.4 333899 . N . . . . GT ./.
|
|
|
288 NC_002945.4 333900 . N . . . . GT ./.
|
|
|
289 NC_002945.4 333901 . N . . . . GT ./.
|
|
|
290 NC_002945.4 333902 . N . . . . GT ./.
|
|
|
291 NC_002945.4 333903 . N . . . . GT ./.
|
|
|
292 NC_002945.4 333904 . N . . . . GT ./.
|
|
|
293 NC_002945.4 333905 . N . . . . GT ./.
|
|
|
294 NC_002945.4 333906 . N . . . . GT ./.
|
|
|
295 NC_002945.4 333907 . N . . . . GT ./.
|
|
|
296 NC_002945.4 333908 . N . . . . GT ./.
|
|
|
297 NC_002945.4 333909 . N . . . . GT ./.
|
|
|
298 NC_002945.4 333910 . N . . . . GT ./.
|
|
|
299 NC_002945.4 333911 . N . . . . GT ./.
|
|
|
300 NC_002945.4 333912 . N . . . . GT ./.
|
|
|
301 NC_002945.4 333913 . N . . . . GT ./.
|
|
|
302 NC_002945.4 333914 . N . . . . GT ./.
|
|
|
303 NC_002945.4 333915 . N . . . . GT ./.
|
|
|
304 NC_002945.4 333916 . N . . . . GT ./.
|
|
|
305 NC_002945.4 333917 . N . . . . GT ./.
|
|
|
306 NC_002945.4 333918 . N . . . . GT ./.
|
|
|
307 NC_002945.4 333919 . N . . . . GT ./.
|
|
|
308 NC_002945.4 333920 . N . . . . GT ./.
|
|
|
309 NC_002945.4 333921 . N . . . . GT ./.
|
|
|
310 NC_002945.4 333922 . N . . . . GT ./.
|
|
|
311 NC_002945.4 333923 . N . . . . GT ./.
|
|
|
312 NC_002945.4 333924 . N . . . . GT ./.
|
|
|
313 NC_002945.4 333925 . N . . . . GT ./.
|
|
|
314 NC_002945.4 333926 . N . . . . GT ./.
|
|
|
315 NC_002945.4 333927 . N . . . . GT ./.
|
|
|
316 NC_002945.4 333928 . N . . . . GT ./.
|
|
|
317 NC_002945.4 333929 . N . . . . GT ./.
|
|
|
318 NC_002945.4 333930 . N . . . . GT ./.
|
|
|
319 NC_002945.4 333931 . N . . . . GT ./.
|
|
|
320 NC_002945.4 333932 . N . . . . GT ./.
|
|
|
321 NC_002945.4 333933 . N . . . . GT ./.
|
|
|
322 NC_002945.4 333934 . N . . . . GT ./.
|
|
|
323 NC_002945.4 333935 . N . . . . GT ./.
|
|
|
324 NC_002945.4 333936 . N . . . . GT ./.
|
|
|
325 NC_002945.4 333937 . N . . . . GT ./.
|
|
|
326 NC_002945.4 334320 . T C 4612.77 . AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.34;QD=29.43;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,104:104:99:4641,319,0
|
|
|
327 NC_002945.4 334323 . T C 3106.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.909;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.41;MQRankSum=-0.381;QD=29.31;ReadPosRankSum=2.142;SOR=0.732 GT:AD:DP:GQ:PL 1/1:2,104:106:99:3135,268,0
|
|
|
328 NC_002945.4 339207 . C T 1002.77 . AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.52;QD=33.43;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,30:30:89:1031,89,0
|
|
|
329 NC_002945.4 340088 . G T 4831.77 . AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.32;QD=29.00;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,106:106:99:4860,325,0
|
|
|
330 NC_002945.4 340097 . C G 4831.77 . AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.33;QD=30.19;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,108:108:99:4860,325,0
|
|
|
331 NC_002945.4 362818 . T C 518.77 . AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:547,39,0
|
|
|
332 NC_002945.4 363823 . N . . . . GT ./.
|
|
|
333 NC_002945.4 363824 . N . . . . GT ./.
|
|
|
334 NC_002945.4 363825 . N . . . . GT ./.
|
|
|
335 NC_002945.4 363826 . N . . . . GT ./.
|
|
|
336 NC_002945.4 363827 . N . . . . GT ./.
|
|
|
337 NC_002945.4 363828 . N . . . . GT ./.
|
|
|
338 NC_002945.4 363829 . N . . . . GT ./.
|
|
|
339 NC_002945.4 363830 . N . . . . GT ./.
|
|
|
340 NC_002945.4 363831 . N . . . . GT ./.
|
|
|
341 NC_002945.4 363832 . N . . . . GT ./.
|
|
|
342 NC_002945.4 363833 . N . . . . GT ./.
|
|
|
343 NC_002945.4 363834 . N . . . . GT ./.
|
|
|
344 NC_002945.4 363835 . N . . . . GT ./.
|
|
|
345 NC_002945.4 363836 . N . . . . GT ./.
|
|
|
346 NC_002945.4 363837 . N . . . . GT ./.
|
|
|
347 NC_002945.4 363838 . N . . . . GT ./.
|
|
|
348 NC_002945.4 363839 . N . . . . GT ./.
|
|
|
349 NC_002945.4 363840 . N . . . . GT ./.
|
|
|
350 NC_002945.4 363841 . N . . . . GT ./.
|
|
|
351 NC_002945.4 363842 . N . . . . GT ./.
|
|
|
352 NC_002945.4 363843 . N . . . . GT ./.
|
|
|
353 NC_002945.4 363844 . N . . . . GT ./.
|
|
|
354 NC_002945.4 363845 . N . . . . GT ./.
|
|
|
355 NC_002945.4 363846 . N . . . . GT ./.
|
|
|
356 NC_002945.4 363847 . N . . . . GT ./.
|
|
|
357 NC_002945.4 363848 . N . . . . GT ./.
|
|
|
358 NC_002945.4 363849 . N . . . . GT ./.
|
|
|
359 NC_002945.4 363850 . N . . . . GT ./.
|
|
|
360 NC_002945.4 363851 . N . . . . GT ./.
|
|
|
361 NC_002945.4 363852 . N . . . . GT ./.
|
|
|
362 NC_002945.4 363853 . N . . . . GT ./.
|
|
|
363 NC_002945.4 363854 . N . . . . GT ./.
|
|
|
364 NC_002945.4 363855 . N . . . . GT ./.
|
|
|
365 NC_002945.4 363856 . N . . . . GT ./.
|
|
|
366 NC_002945.4 363857 . N . . . . GT ./.
|
|
|
367 NC_002945.4 363858 . N . . . . GT ./.
|
|
|
368 NC_002945.4 363859 . N . . . . GT ./.
|
|
|
369 NC_002945.4 363860 . N . . . . GT ./.
|
|
|
370 NC_002945.4 363861 . N . . . . GT ./.
|
|
|
371 NC_002945.4 363862 . N . . . . GT ./.
|
|
|
372 NC_002945.4 363863 . N . . . . GT ./.
|
|
|
373 NC_002945.4 363864 . N . . . . GT ./.
|
|
|
374 NC_002945.4 363865 . N . . . . GT ./.
|
|
|
375 NC_002945.4 363866 . N . . . . GT ./.
|
|
|
376 NC_002945.4 363867 . N . . . . GT ./.
|
|
|
377 NC_002945.4 363868 . N . . . . GT ./.
|
|
|
378 NC_002945.4 363869 . N . . . . GT ./.
|
|
|
379 NC_002945.4 363870 . N . . . . GT ./.
|
|
|
380 NC_002945.4 363871 . N . . . . GT ./.
|
|
|
381 NC_002945.4 363872 . N . . . . GT ./.
|
|
|
382 NC_002945.4 363873 . N . . . . GT ./.
|
|
|
383 NC_002945.4 363874 . N . . . . GT ./.
|
|
|
384 NC_002945.4 363875 . N . . . . GT ./.
|
|
|
385 NC_002945.4 364560 . A G 8443.77 . AC=2;AF=1.00;AN=2;DP=254;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,254:254:99:8472,762,0
|
|
|
386 NC_002945.4 364804 . T C 9132.77 . AC=2;AF=1.00;AN=2;DP=282;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,282:282:99:9161,845,0
|
|
|
387 NC_002945.4 364938 . A G 9420.77 . AC=2;AF=1.00;AN=2;DP=295;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,295:295:99:9449,883,0
|
|
|
388 NC_002945.4 366022 . T C 6572.77 . AC=2;AF=1.00;AN=2;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,199:199:99:6601,596,0
|
|
|
389 NC_002945.4 397805 . N . . . . GT ./.
|
|
|
390 NC_002945.4 425180 . C G 8097.77 . AC=2;AF=1.00;AN=2;DP=252;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=1.192 GT:AD:DP:GQ:PL 1/1:0,252:252:99:8126,752,0
|
|
|
391 NC_002945.4 430077 . C T 5089.77 . AC=2;AF=1.00;AN=2;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,172:172:99:5118,510,0
|
|
|
392 NC_002945.4 441762 . C T 4147.77 . AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4176,403,0
|
|
|
393 NC_002945.4 467343 . C T 7290.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.772;ClippingRankSum=0.000;DP=220;ExcessHet=3.0103;FS=3.786;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.14;ReadPosRankSum=-0.709;SOR=0.796 GT:AD:DP:GQ:PL 1/1:1,219:220:99:7319,646,0
|
|
|
394 NC_002945.4 470216 . T G 7689.77 . AC=2;AF=1.00;AN=2;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.16;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,255:255:99:7718,762,0
|
|
|
395 NC_002945.4 490878 . G A 9551.77 . AC=2;AF=1.00;AN=2;DP=309;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,309:309:99:9580,924,0
|
|
|
396 NC_002945.4 507929 . T C 8764.77 . AC=2;AF=1.00;AN=2;DP=287;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.54;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,287:287:99:8793,855,0
|
|
|
397 NC_002945.4 519412 . T C 3459.77 . AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3488,302,0
|
|
|
398 NC_002945.4 544180 . C T 7147.77 . AC=2;AF=1.00;AN=2;DP=242;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.54;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,242:242:99:7176,721,0
|
|
|
399 NC_002945.4 564460 . C T 8700.77 . AC=2;AF=1.00;AN=2;DP=287;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=0.993 GT:AD:DP:GQ:PL 1/1:0,286:286:99:8729,856,0
|
|
|
400 NC_002945.4 598704 . C G 7838.77 . AC=2;AF=1.00;AN=2;DP=243;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,243:243:99:7867,724,0
|
|
|
401 NC_002945.4 599623 . G T 8752.77 . AC=2;AF=1.00;AN=2;DP=305;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.79;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,304:304:99:8781,905,0
|
|
|
402 NC_002945.4 611077 . A G 8309.77 . AC=2;AF=1.00;AN=2;DP=265;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.36;SOR=1.218 GT:AD:DP:GQ:PL 1/1:0,265:265:99:8338,789,0
|
|
|
403 NC_002945.4 616758 . C T 6171.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.595;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.01;ReadPosRankSum=3.153;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,198:199:99:6200,582,0
|
|
|
404 NC_002945.4 622386 . C G 7727.77 . AC=2;AF=1.00;AN=2;DP=243;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,243:243:99:7756,725,0
|
|
|
405 NC_002945.4 624587 . N . . . . GT ./.
|
|
|
406 NC_002945.4 624588 . N . . . . GT ./.
|
|
|
407 NC_002945.4 624589 . N . . . . GT ./.
|
|
|
408 NC_002945.4 624590 . N . . . . GT ./.
|
|
|
409 NC_002945.4 624591 . N . . . . GT ./.
|
|
|
410 NC_002945.4 624592 . N . . . . GT ./.
|
|
|
411 NC_002945.4 624593 . N . . . . GT ./.
|
|
|
412 NC_002945.4 624594 . N . . . . GT ./.
|
|
|
413 NC_002945.4 624595 . N . . . . GT ./.
|
|
|
414 NC_002945.4 624596 . N . . . . GT ./.
|
|
|
415 NC_002945.4 624597 . N . . . . GT ./.
|
|
|
416 NC_002945.4 624598 . N . . . . GT ./.
|
|
|
417 NC_002945.4 624599 . N . . . . GT ./.
|
|
|
418 NC_002945.4 624600 . N . . . . GT ./.
|
|
|
419 NC_002945.4 624601 . N . . . . GT ./.
|
|
|
420 NC_002945.4 624602 . N . . . . GT ./.
|
|
|
421 NC_002945.4 624603 . N . . . . GT ./.
|
|
|
422 NC_002945.4 624604 . N . . . . GT ./.
|
|
|
423 NC_002945.4 624605 . N . . . . GT ./.
|
|
|
424 NC_002945.4 624606 . N . . . . GT ./.
|
|
|
425 NC_002945.4 624607 . N . . . . GT ./.
|
|
|
426 NC_002945.4 624608 . N . . . . GT ./.
|
|
|
427 NC_002945.4 624609 . N . . . . GT ./.
|
|
|
428 NC_002945.4 624610 . N . . . . GT ./.
|
|
|
429 NC_002945.4 624611 . N . . . . GT ./.
|
|
|
430 NC_002945.4 624612 . N . . . . GT ./.
|
|
|
431 NC_002945.4 624613 . N . . . . GT ./.
|
|
|
432 NC_002945.4 624614 . N . . . . GT ./.
|
|
|
433 NC_002945.4 624615 . N . . . . GT ./.
|
|
|
434 NC_002945.4 624616 . N . . . . GT ./.
|
|
|
435 NC_002945.4 624617 . N . . . . GT ./.
|
|
|
436 NC_002945.4 624618 . N . . . . GT ./.
|
|
|
437 NC_002945.4 624619 . N . . . . GT ./.
|
|
|
438 NC_002945.4 624620 . N . . . . GT ./.
|
|
|
439 NC_002945.4 624621 . N . . . . GT ./.
|
|
|
440 NC_002945.4 624622 . N . . . . GT ./.
|
|
|
441 NC_002945.4 624623 . N . . . . GT ./.
|
|
|
442 NC_002945.4 624624 . N . . . . GT ./.
|
|
|
443 NC_002945.4 624625 . N . . . . GT ./.
|
|
|
444 NC_002945.4 624626 . N . . . . GT ./.
|
|
|
445 NC_002945.4 624627 . N . . . . GT ./.
|
|
|
446 NC_002945.4 624628 . N . . . . GT ./.
|
|
|
447 NC_002945.4 624629 . N . . . . GT ./.
|
|
|
448 NC_002945.4 624630 . N . . . . GT ./.
|
|
|
449 NC_002945.4 624631 . N . . . . GT ./.
|
|
|
450 NC_002945.4 624632 . N . . . . GT ./.
|
|
|
451 NC_002945.4 624633 . N . . . . GT ./.
|
|
|
452 NC_002945.4 624634 . N . . . . GT ./.
|
|
|
453 NC_002945.4 624635 . N . . . . GT ./.
|
|
|
454 NC_002945.4 624636 . N . . . . GT ./.
|
|
|
455 NC_002945.4 624637 . N . . . . GT ./.
|
|
|
456 NC_002945.4 624638 . N . . . . GT ./.
|
|
|
457 NC_002945.4 624639 . N . . . . GT ./.
|
|
|
458 NC_002945.4 624640 . N . . . . GT ./.
|
|
|
459 NC_002945.4 624641 . N . . . . GT ./.
|
|
|
460 NC_002945.4 624642 . N . . . . GT ./.
|
|
|
461 NC_002945.4 624643 . N . . . . GT ./.
|
|
|
462 NC_002945.4 624644 . N . . . . GT ./.
|
|
|
463 NC_002945.4 624645 . N . . . . GT ./.
|
|
|
464 NC_002945.4 624646 . N . . . . GT ./.
|
|
|
465 NC_002945.4 624647 . N . . . . GT ./.
|
|
|
466 NC_002945.4 624648 . N . . . . GT ./.
|
|
|
467 NC_002945.4 624649 . N . . . . GT ./.
|
|
|
468 NC_002945.4 624650 . N . . . . GT ./.
|
|
|
469 NC_002945.4 624651 . N . . . . GT ./.
|
|
|
470 NC_002945.4 624652 . N . . . . GT ./.
|
|
|
471 NC_002945.4 624653 . N . . . . GT ./.
|
|
|
472 NC_002945.4 624654 . N . . . . GT ./.
|
|
|
473 NC_002945.4 624655 . N . . . . GT ./.
|
|
|
474 NC_002945.4 624656 . N . . . . GT ./.
|
|
|
475 NC_002945.4 624657 . N . . . . GT ./.
|
|
|
476 NC_002945.4 624890 . N . . . . GT ./.
|
|
|
477 NC_002945.4 624891 . N . . . . GT ./.
|
|
|
478 NC_002945.4 624892 . N . . . . GT ./.
|
|
|
479 NC_002945.4 624893 . N . . . . GT ./.
|
|
|
480 NC_002945.4 624894 . N . . . . GT ./.
|
|
|
481 NC_002945.4 624895 . N . . . . GT ./.
|
|
|
482 NC_002945.4 624896 . N . . . . GT ./.
|
|
|
483 NC_002945.4 624897 . N . . . . GT ./.
|
|
|
484 NC_002945.4 624898 . N . . . . GT ./.
|
|
|
485 NC_002945.4 624899 . N . . . . GT ./.
|
|
|
486 NC_002945.4 624900 . N . . . . GT ./.
|
|
|
487 NC_002945.4 624901 . N . . . . GT ./.
|
|
|
488 NC_002945.4 624902 . N . . . . GT ./.
|
|
|
489 NC_002945.4 624903 . N . . . . GT ./.
|
|
|
490 NC_002945.4 624904 . N . . . . GT ./.
|
|
|
491 NC_002945.4 624905 . N . . . . GT ./.
|
|
|
492 NC_002945.4 624906 . N . . . . GT ./.
|
|
|
493 NC_002945.4 624907 . N . . . . GT ./.
|
|
|
494 NC_002945.4 624908 . N . . . . GT ./.
|
|
|
495 NC_002945.4 624909 . N . . . . GT ./.
|
|
|
496 NC_002945.4 624910 . N . . . . GT ./.
|
|
|
497 NC_002945.4 624911 . N . . . . GT ./.
|
|
|
498 NC_002945.4 624912 . N . . . . GT ./.
|
|
|
499 NC_002945.4 624913 . N . . . . GT ./.
|
|
|
500 NC_002945.4 624914 . N . . . . GT ./.
|
|
|
501 NC_002945.4 624915 . N . . . . GT ./.
|
|
|
502 NC_002945.4 624916 . N . . . . GT ./.
|
|
|
503 NC_002945.4 624917 . N . . . . GT ./.
|
|
|
504 NC_002945.4 624918 . N . . . . GT ./.
|
|
|
505 NC_002945.4 624919 . N . . . . GT ./.
|
|
|
506 NC_002945.4 624920 . N . . . . GT ./.
|
|
|
507 NC_002945.4 624921 . N . . . . GT ./.
|
|
|
508 NC_002945.4 624922 . N . . . . GT ./.
|
|
|
509 NC_002945.4 624923 . N . . . . GT ./.
|
|
|
510 NC_002945.4 624924 . N . . . . GT ./.
|
|
|
511 NC_002945.4 624925 . N . . . . GT ./.
|
|
|
512 NC_002945.4 624926 . N . . . . GT ./.
|
|
|
513 NC_002945.4 624927 . N . . . . GT ./.
|
|
|
514 NC_002945.4 624928 . N . . . . GT ./.
|
|
|
515 NC_002945.4 624929 . N . . . . GT ./.
|
|
|
516 NC_002945.4 624930 . N . . . . GT ./.
|
|
|
517 NC_002945.4 624931 . N . . . . GT ./.
|
|
|
518 NC_002945.4 624932 . N . . . . GT ./.
|
|
|
519 NC_002945.4 624933 . N . . . . GT ./.
|
|
|
520 NC_002945.4 624934 . N . . . . GT ./.
|
|
|
521 NC_002945.4 624935 . N . . . . GT ./.
|
|
|
522 NC_002945.4 624936 . N . . . . GT ./.
|
|
|
523 NC_002945.4 624937 . N . . . . GT ./.
|
|
|
524 NC_002945.4 624938 . N . . . . GT ./.
|
|
|
525 NC_002945.4 624939 . N . . . . GT ./.
|
|
|
526 NC_002945.4 624940 . N . . . . GT ./.
|
|
|
527 NC_002945.4 624941 . N . . . . GT ./.
|
|
|
528 NC_002945.4 624942 . N . . . . GT ./.
|
|
|
529 NC_002945.4 624943 . N . . . . GT ./.
|
|
|
530 NC_002945.4 624944 . N . . . . GT ./.
|
|
|
531 NC_002945.4 624945 . N . . . . GT ./.
|
|
|
532 NC_002945.4 624946 . N . . . . GT ./.
|
|
|
533 NC_002945.4 624947 . N . . . . GT ./.
|
|
|
534 NC_002945.4 624948 . N . . . . GT ./.
|
|
|
535 NC_002945.4 624949 . N . . . . GT ./.
|
|
|
536 NC_002945.4 624950 . N . . . . GT ./.
|
|
|
537 NC_002945.4 624951 . N . . . . GT ./.
|
|
|
538 NC_002945.4 624952 . N . . . . GT ./.
|
|
|
539 NC_002945.4 624953 . N . . . . GT ./.
|
|
|
540 NC_002945.4 624954 . N . . . . GT ./.
|
|
|
541 NC_002945.4 624955 . N . . . . GT ./.
|
|
|
542 NC_002945.4 624956 . N . . . . GT ./.
|
|
|
543 NC_002945.4 624957 . N . . . . GT ./.
|
|
|
544 NC_002945.4 624958 . N . . . . GT ./.
|
|
|
545 NC_002945.4 624959 . N . . . . GT ./.
|
|
|
546 NC_002945.4 624960 . N . . . . GT ./.
|
|
|
547 NC_002945.4 644245 . C G 6293.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.025;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.85;ReadPosRankSum=3.289;SOR=0.733 GT:AD:DP:GQ:PL 1/1:2,202:204:99:6322,560,0
|
|
|
548 NC_002945.4 649910 . T C 7843.77 . AC=2;AF=1.00;AN=2;DP=244;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=1.031 GT:AD:DP:GQ:PL 1/1:0,244:244:99:7872,731,0
|
|
|
549 NC_002945.4 669797 . C T 5613.77 . AC=2;AF=1.00;AN=2;DP=190;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.70;SOR=0.964 GT:AD:DP:GQ:PL 1/1:0,189:189:99:5642,561,0
|
|
|
550 NC_002945.4 673463 . N . . . . GT ./.
|
|
|
551 NC_002945.4 673464 . N . . . . GT ./.
|
|
|
552 NC_002945.4 673465 . N . . . . GT ./.
|
|
|
553 NC_002945.4 673466 . N . . . . GT ./.
|
|
|
554 NC_002945.4 673467 . N . . . . GT ./.
|
|
|
555 NC_002945.4 673468 . N . . . . GT ./.
|
|
|
556 NC_002945.4 673469 . N . . . . GT ./.
|
|
|
557 NC_002945.4 673470 . N . . . . GT ./.
|
|
|
558 NC_002945.4 673471 . N . . . . GT ./.
|
|
|
559 NC_002945.4 673880 . T C 1267.77 . AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.93;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1296,107,0
|
|
|
560 NC_002945.4 676376 . N . . . . GT ./.
|
|
|
561 NC_002945.4 676377 . N . . . . GT ./.
|
|
|
562 NC_002945.4 676378 . N . . . . GT ./.
|
|
|
563 NC_002945.4 676379 . N . . . . GT ./.
|
|
|
564 NC_002945.4 676380 . N . . . . GT ./.
|
|
|
565 NC_002945.4 676381 . N . . . . GT ./.
|
|
|
566 NC_002945.4 676382 . N . . . . GT ./.
|
|
|
567 NC_002945.4 676383 . N . . . . GT ./.
|
|
|
568 NC_002945.4 676384 . N . . . . GT ./.
|
|
|
569 NC_002945.4 676385 . N . . . . GT ./.
|
|
|
570 NC_002945.4 676386 . N . . . . GT ./.
|
|
|
571 NC_002945.4 676387 . N . . . . GT ./.
|
|
|
572 NC_002945.4 676388 . N . . . . GT ./.
|
|
|
573 NC_002945.4 676389 . N . . . . GT ./.
|
|
|
574 NC_002945.4 676390 . N . . . . GT ./.
|
|
|
575 NC_002945.4 676391 . N . . . . GT ./.
|
|
|
576 NC_002945.4 676392 . N . . . . GT ./.
|
|
|
577 NC_002945.4 676393 . N . . . . GT ./.
|
|
|
578 NC_002945.4 676394 . N . . . . GT ./.
|
|
|
579 NC_002945.4 676395 . N . . . . GT ./.
|
|
|
580 NC_002945.4 676396 . N . . . . GT ./.
|
|
|
581 NC_002945.4 676397 . N . . . . GT ./.
|
|
|
582 NC_002945.4 676471 . N . . . . GT ./.
|
|
|
583 NC_002945.4 676472 . N . . . . GT ./.
|
|
|
584 NC_002945.4 676473 . N . . . . GT ./.
|
|
|
585 NC_002945.4 676474 . N . . . . GT ./.
|
|
|
586 NC_002945.4 676475 . N . . . . GT ./.
|
|
|
587 NC_002945.4 676476 . N . . . . GT ./.
|
|
|
588 NC_002945.4 676477 . N . . . . GT ./.
|
|
|
589 NC_002945.4 676478 . N . . . . GT ./.
|
|
|
590 NC_002945.4 676479 . N . . . . GT ./.
|
|
|
591 NC_002945.4 676480 . N . . . . GT ./.
|
|
|
592 NC_002945.4 676481 . N . . . . GT ./.
|
|
|
593 NC_002945.4 676482 . N . . . . GT ./.
|
|
|
594 NC_002945.4 676483 . N . . . . GT ./.
|
|
|
595 NC_002945.4 676484 . N . . . . GT ./.
|
|
|
596 NC_002945.4 676485 . N . . . . GT ./.
|
|
|
597 NC_002945.4 676486 . N . . . . GT ./.
|
|
|
598 NC_002945.4 676487 . N . . . . GT ./.
|
|
|
599 NC_002945.4 676488 . N . . . . GT ./.
|
|
|
600 NC_002945.4 676489 . N . . . . GT ./.
|
|
|
601 NC_002945.4 676490 . N . . . . GT ./.
|
|
|
602 NC_002945.4 676491 . N . . . . GT ./.
|
|
|
603 NC_002945.4 676492 . N . . . . GT ./.
|
|
|
604 NC_002945.4 676493 . N . . . . GT ./.
|
|
|
605 NC_002945.4 676494 . N . . . . GT ./.
|
|
|
606 NC_002945.4 676495 . N . . . . GT ./.
|
|
|
607 NC_002945.4 676496 . N . . . . GT ./.
|
|
|
608 NC_002945.4 676497 . N . . . . GT ./.
|
|
|
609 NC_002945.4 676498 . N . . . . GT ./.
|
|
|
610 NC_002945.4 676499 . N . . . . GT ./.
|
|
|
611 NC_002945.4 676500 . N . . . . GT ./.
|
|
|
612 NC_002945.4 676501 . N . . . . GT ./.
|
|
|
613 NC_002945.4 676537 . N . . . . GT ./.
|
|
|
614 NC_002945.4 676538 . N . . . . GT ./.
|
|
|
615 NC_002945.4 676539 . N . . . . GT ./.
|
|
|
616 NC_002945.4 676540 . N . . . . GT ./.
|
|
|
617 NC_002945.4 676541 . N . . . . GT ./.
|
|
|
618 NC_002945.4 676542 . N . . . . GT ./.
|
|
|
619 NC_002945.4 676543 . N . . . . GT ./.
|
|
|
620 NC_002945.4 676544 . N . . . . GT ./.
|
|
|
621 NC_002945.4 676545 . N . . . . GT ./.
|
|
|
622 NC_002945.4 676546 . N . . . . GT ./.
|
|
|
623 NC_002945.4 676547 . N . . . . GT ./.
|
|
|
624 NC_002945.4 676548 . N . . . . GT ./.
|
|
|
625 NC_002945.4 676549 . N . . . . GT ./.
|
|
|
626 NC_002945.4 676550 . N . . . . GT ./.
|
|
|
627 NC_002945.4 676551 . N . . . . GT ./.
|
|
|
628 NC_002945.4 676552 . N . . . . GT ./.
|
|
|
629 NC_002945.4 676553 . N . . . . GT ./.
|
|
|
630 NC_002945.4 676554 . N . . . . GT ./.
|
|
|
631 NC_002945.4 676555 . N . . . . GT ./.
|
|
|
632 NC_002945.4 676556 . N . . . . GT ./.
|
|
|
633 NC_002945.4 676557 . N . . . . GT ./.
|
|
|
634 NC_002945.4 676558 . N . . . . GT ./.
|
|
|
635 NC_002945.4 679557 . N . . . . GT ./.
|
|
|
636 NC_002945.4 679558 . N . . . . GT ./.
|
|
|
637 NC_002945.4 679559 . N . . . . GT ./.
|
|
|
638 NC_002945.4 679560 . N . . . . GT ./.
|
|
|
639 NC_002945.4 679561 . N . . . . GT ./.
|
|
|
640 NC_002945.4 679562 . N . . . . GT ./.
|
|
|
641 NC_002945.4 679563 . N . . . . GT ./.
|
|
|
642 NC_002945.4 679564 . N . . . . GT ./.
|
|
|
643 NC_002945.4 679565 . N . . . . GT ./.
|
|
|
644 NC_002945.4 679566 . N . . . . GT ./.
|
|
|
645 NC_002945.4 679567 . N . . . . GT ./.
|
|
|
646 NC_002945.4 679568 . N . . . . GT ./.
|
|
|
647 NC_002945.4 679569 . N . . . . GT ./.
|
|
|
648 NC_002945.4 679570 . N . . . . GT ./.
|
|
|
649 NC_002945.4 679571 . N . . . . GT ./.
|
|
|
650 NC_002945.4 679572 . N . . . . GT ./.
|
|
|
651 NC_002945.4 679573 . N . . . . GT ./.
|
|
|
652 NC_002945.4 679574 . N . . . . GT ./.
|
|
|
653 NC_002945.4 679575 . N . . . . GT ./.
|
|
|
654 NC_002945.4 679576 . N . . . . GT ./.
|
|
|
655 NC_002945.4 679577 . N . . . . GT ./.
|
|
|
656 NC_002945.4 679578 . N . . . . GT ./.
|
|
|
657 NC_002945.4 679579 . N . . . . GT ./.
|
|
|
658 NC_002945.4 679580 . N . . . . GT ./.
|
|
|
659 NC_002945.4 679581 . N . . . . GT ./.
|
|
|
660 NC_002945.4 679582 . N . . . . GT ./.
|
|
|
661 NC_002945.4 679583 . N . . . . GT ./.
|
|
|
662 NC_002945.4 679584 . N . . . . GT ./.
|
|
|
663 NC_002945.4 679585 . N . . . . GT ./.
|
|
|
664 NC_002945.4 679586 . N . . . . GT ./.
|
|
|
665 NC_002945.4 679587 . N . . . . GT ./.
|
|
|
666 NC_002945.4 679588 . N . . . . GT ./.
|
|
|
667 NC_002945.4 679589 . N . . . . GT ./.
|
|
|
668 NC_002945.4 679590 . N . . . . GT ./.
|
|
|
669 NC_002945.4 679591 . N . . . . GT ./.
|
|
|
670 NC_002945.4 679592 . N . . . . GT ./.
|
|
|
671 NC_002945.4 679593 . N . . . . GT ./.
|
|
|
672 NC_002945.4 679594 . N . . . . GT ./.
|
|
|
673 NC_002945.4 679595 . N . . . . GT ./.
|
|
|
674 NC_002945.4 679596 . N . . . . GT ./.
|
|
|
675 NC_002945.4 679597 . N . . . . GT ./.
|
|
|
676 NC_002945.4 679598 . N . . . . GT ./.
|
|
|
677 NC_002945.4 679599 . N . . . . GT ./.
|
|
|
678 NC_002945.4 679600 . N . . . . GT ./.
|
|
|
679 NC_002945.4 679601 . N . . . . GT ./.
|
|
|
680 NC_002945.4 679602 . N . . . . GT ./.
|
|
|
681 NC_002945.4 679603 . N . . . . GT ./.
|
|
|
682 NC_002945.4 679604 . N . . . . GT ./.
|
|
|
683 NC_002945.4 679605 . N . . . . GT ./.
|
|
|
684 NC_002945.4 679606 . N . . . . GT ./.
|
|
|
685 NC_002945.4 679607 . N . . . . GT ./.
|
|
|
686 NC_002945.4 679608 . N . . . . GT ./.
|
|
|
687 NC_002945.4 679609 . N . . . . GT ./.
|
|
|
688 NC_002945.4 679610 . N . . . . GT ./.
|
|
|
689 NC_002945.4 679611 . N . . . . GT ./.
|
|
|
690 NC_002945.4 679612 . N . . . . GT ./.
|
|
|
691 NC_002945.4 679613 . N . . . . GT ./.
|
|
|
692 NC_002945.4 679614 . N . . . . GT ./.
|
|
|
693 NC_002945.4 679615 . N . . . . GT ./.
|
|
|
694 NC_002945.4 679616 . N . . . . GT ./.
|
|
|
695 NC_002945.4 679617 . N . . . . GT ./.
|
|
|
696 NC_002945.4 679618 . N . . . . GT ./.
|
|
|
697 NC_002945.4 679619 . N . . . . GT ./.
|
|
|
698 NC_002945.4 679620 . N . . . . GT ./.
|
|
|
699 NC_002945.4 679621 . N . . . . GT ./.
|
|
|
700 NC_002945.4 679622 . N . . . . GT ./.
|
|
|
701 NC_002945.4 679623 . N . . . . GT ./.
|
|
|
702 NC_002945.4 679624 . N . . . . GT ./.
|
|
|
703 NC_002945.4 679625 . N . . . . GT ./.
|
|
|
704 NC_002945.4 679626 . N . . . . GT ./.
|
|
|
705 NC_002945.4 679627 . N . . . . GT ./.
|
|
|
706 NC_002945.4 679628 . N . . . . GT ./.
|
|
|
707 NC_002945.4 679629 . N . . . . GT ./.
|
|
|
708 NC_002945.4 679630 . N . . . . GT ./.
|
|
|
709 NC_002945.4 679631 . N . . . . GT ./.
|
|
|
710 NC_002945.4 679632 . N . . . . GT ./.
|
|
|
711 NC_002945.4 679633 . N . . . . GT ./.
|
|
|
712 NC_002945.4 679634 . N . . . . GT ./.
|
|
|
713 NC_002945.4 679635 . N . . . . GT ./.
|
|
|
714 NC_002945.4 679636 . N . . . . GT ./.
|
|
|
715 NC_002945.4 679637 . N . . . . GT ./.
|
|
|
716 NC_002945.4 679638 . N . . . . GT ./.
|
|
|
717 NC_002945.4 679639 . N . . . . GT ./.
|
|
|
718 NC_002945.4 679640 . N . . . . GT ./.
|
|
|
719 NC_002945.4 679641 . N . . . . GT ./.
|
|
|
720 NC_002945.4 679642 . N . . . . GT ./.
|
|
|
721 NC_002945.4 679643 . N . . . . GT ./.
|
|
|
722 NC_002945.4 679644 . N . . . . GT ./.
|
|
|
723 NC_002945.4 680416 . C T 7809.77 . AC=2;AF=1.00;AN=2;DP=247;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.62;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,247:247:99:7838,739,0
|
|
|
724 NC_002945.4 685069 . T C 4402.77 . AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=1.990 GT:AD:DP:GQ:PL 1/1:0,135:135:99:4431,404,0
|
|
|
725 NC_002945.4 691411 . C T 7090.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.54;ReadPosRankSum=1.576;SOR=0.331 GT:AD:DP:GQ:PL 1/1:1,239:240:99:7119,705,0
|
|
|
726 NC_002945.4 701329 . G C 5130.77 . AC=2;AF=1.00;AN=2;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=1.697 GT:AD:DP:GQ:PL 1/1:0,166:166:99:5159,491,0
|
|
|
727 NC_002945.4 701386 . A G 5724.77 . AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=1.516 GT:AD:DP:GQ:PL 1/1:0,174:174:99:5753,520,0
|
|
|
728 NC_002945.4 712319 . T C 4524.77 . AC=2;AF=1.00;AN=2;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=0.764 GT:AD:DP:GQ:PL 1/1:0,145:145:99:4553,429,0
|
|
|
729 NC_002945.4 726979 . A G 4556.77 . AC=2;AF=1.00;AN=2;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,139:139:99:4585,416,0
|
|
|
730 NC_002945.4 759943 . C T 6864.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.969;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.98;SOR=0.702 GT:AD:DP:GQ:PL 1/1:2,227:229:99:6893,593,0
|
|
|
731 NC_002945.4 776314 . A C 4616.77 . AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4645,429,0
|
|
|
732 NC_002945.4 804997 . T C 6645.77 . AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.91;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,196:196:99:6674,585,0
|
|
|
733 NC_002945.4 808601 . T G 11810.77 . AC=2;AF=1.00;AN=2;DP=371;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,371:371:99:11839,1110,0
|
|
|
734 NC_002945.4 811737 . C A 7900.77 . AC=2;AF=1.00;AN=2;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.17;QD=30.98;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,255:255:99:7929,764,0
|
|
|
735 NC_002945.4 812709 . G A 5022.77 . AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.59;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5051,475,0
|
|
|
736 NC_002945.4 828003 . C G 5697.77 . AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.22;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,195:195:99:5726,577,0
|
|
|
737 NC_002945.4 838077 . N . . . . GT ./.
|
|
|
738 NC_002945.4 838078 . N . . . . GT ./.
|
|
|
739 NC_002945.4 838079 . N . . . . GT ./.
|
|
|
740 NC_002945.4 838080 . N . . . . GT ./.
|
|
|
741 NC_002945.4 838081 . N . . . . GT ./.
|
|
|
742 NC_002945.4 838082 . N . . . . GT ./.
|
|
|
743 NC_002945.4 838147 . N . . . . GT ./.
|
|
|
744 NC_002945.4 838148 . N . . . . GT ./.
|
|
|
745 NC_002945.4 838149 . N . . . . GT ./.
|
|
|
746 NC_002945.4 838150 . N . . . . GT ./.
|
|
|
747 NC_002945.4 838151 . N . . . . GT ./.
|
|
|
748 NC_002945.4 838152 . N . . . . GT ./.
|
|
|
749 NC_002945.4 838153 . N . . . . GT ./.
|
|
|
750 NC_002945.4 838154 . N . . . . GT ./.
|
|
|
751 NC_002945.4 838155 . N . . . . GT ./.
|
|
|
752 NC_002945.4 838156 . N . . . . GT ./.
|
|
|
753 NC_002945.4 838157 . N . . . . GT ./.
|
|
|
754 NC_002945.4 838158 . N . . . . GT ./.
|
|
|
755 NC_002945.4 838159 . N . . . . GT ./.
|
|
|
756 NC_002945.4 838160 . N . . . . GT ./.
|
|
|
757 NC_002945.4 838161 . N . . . . GT ./.
|
|
|
758 NC_002945.4 838162 . N . . . . GT ./.
|
|
|
759 NC_002945.4 838163 . N . . . . GT ./.
|
|
|
760 NC_002945.4 838164 . N . . . . GT ./.
|
|
|
761 NC_002945.4 838165 . N . . . . GT ./.
|
|
|
762 NC_002945.4 838166 . N . . . . GT ./.
|
|
|
763 NC_002945.4 838167 . N . . . . GT ./.
|
|
|
764 NC_002945.4 838168 . N . . . . GT ./.
|
|
|
765 NC_002945.4 838169 . N . . . . GT ./.
|
|
|
766 NC_002945.4 838170 . N . . . . GT ./.
|
|
|
767 NC_002945.4 838171 . N . . . . GT ./.
|
|
|
768 NC_002945.4 838172 . N . . . . GT ./.
|
|
|
769 NC_002945.4 838173 . N . . . . GT ./.
|
|
|
770 NC_002945.4 838174 . N . . . . GT ./.
|
|
|
771 NC_002945.4 838175 . N . . . . GT ./.
|
|
|
772 NC_002945.4 838176 . N . . . . GT ./.
|
|
|
773 NC_002945.4 838177 . N . . . . GT ./.
|
|
|
774 NC_002945.4 838178 . N . . . . GT ./.
|
|
|
775 NC_002945.4 838179 . N . . . . GT ./.
|
|
|
776 NC_002945.4 838180 . N . . . . GT ./.
|
|
|
777 NC_002945.4 838181 . N . . . . GT ./.
|
|
|
778 NC_002945.4 838182 . N . . . . GT ./.
|
|
|
779 NC_002945.4 838183 . N . . . . GT ./.
|
|
|
780 NC_002945.4 838184 . N . . . . GT ./.
|
|
|
781 NC_002945.4 838185 . N . . . . GT ./.
|
|
|
782 NC_002945.4 838186 . N . . . . GT ./.
|
|
|
783 NC_002945.4 838187 . N . . . . GT ./.
|
|
|
784 NC_002945.4 838188 . N . . . . GT ./.
|
|
|
785 NC_002945.4 838189 . N . . . . GT ./.
|
|
|
786 NC_002945.4 838190 . N . . . . GT ./.
|
|
|
787 NC_002945.4 838191 . N . . . . GT ./.
|
|
|
788 NC_002945.4 839052 . N . . . . GT ./.
|
|
|
789 NC_002945.4 839053 . N . . . . GT ./.
|
|
|
790 NC_002945.4 839054 . N . . . . GT ./.
|
|
|
791 NC_002945.4 839055 . N . . . . GT ./.
|
|
|
792 NC_002945.4 839056 . N . . . . GT ./.
|
|
|
793 NC_002945.4 839057 . N . . . . GT ./.
|
|
|
794 NC_002945.4 839058 . N . . . . GT ./.
|
|
|
795 NC_002945.4 839059 . N . . . . GT ./.
|
|
|
796 NC_002945.4 839060 . N . . . . GT ./.
|
|
|
797 NC_002945.4 839061 . N . . . . GT ./.
|
|
|
798 NC_002945.4 839062 . N . . . . GT ./.
|
|
|
799 NC_002945.4 839063 . N . . . . GT ./.
|
|
|
800 NC_002945.4 839064 . N . . . . GT ./.
|
|
|
801 NC_002945.4 839065 . N . . . . GT ./.
|
|
|
802 NC_002945.4 839066 . N . . . . GT ./.
|
|
|
803 NC_002945.4 839067 . N . . . . GT ./.
|
|
|
804 NC_002945.4 839068 . N . . . . GT ./.
|
|
|
805 NC_002945.4 839069 . N . . . . GT ./.
|
|
|
806 NC_002945.4 839070 . N . . . . GT ./.
|
|
|
807 NC_002945.4 839071 . N . . . . GT ./.
|
|
|
808 NC_002945.4 839072 . N . . . . GT ./.
|
|
|
809 NC_002945.4 839073 . N . . . . GT ./.
|
|
|
810 NC_002945.4 839074 . N . . . . GT ./.
|
|
|
811 NC_002945.4 839075 . N . . . . GT ./.
|
|
|
812 NC_002945.4 839076 . N . . . . GT ./.
|
|
|
813 NC_002945.4 839077 . N . . . . GT ./.
|
|
|
814 NC_002945.4 839078 . N . . . . GT ./.
|
|
|
815 NC_002945.4 839079 . N . . . . GT ./.
|
|
|
816 NC_002945.4 839080 . N . . . . GT ./.
|
|
|
817 NC_002945.4 839081 . N . . . . GT ./.
|
|
|
818 NC_002945.4 839082 . N . . . . GT ./.
|
|
|
819 NC_002945.4 839083 . N . . . . GT ./.
|
|
|
820 NC_002945.4 839084 . N . . . . GT ./.
|
|
|
821 NC_002945.4 839085 . N . . . . GT ./.
|
|
|
822 NC_002945.4 839086 . N . . . . GT ./.
|
|
|
823 NC_002945.4 839087 . N . . . . GT ./.
|
|
|
824 NC_002945.4 839088 . N . . . . GT ./.
|
|
|
825 NC_002945.4 839089 . N . . . . GT ./.
|
|
|
826 NC_002945.4 839090 . N . . . . GT ./.
|
|
|
827 NC_002945.4 839091 . N . . . . GT ./.
|
|
|
828 NC_002945.4 839092 . N . . . . GT ./.
|
|
|
829 NC_002945.4 839093 . N . . . . GT ./.
|
|
|
830 NC_002945.4 839094 . N . . . . GT ./.
|
|
|
831 NC_002945.4 839095 . N . . . . GT ./.
|
|
|
832 NC_002945.4 839096 . N . . . . GT ./.
|
|
|
833 NC_002945.4 839097 . N . . . . GT ./.
|
|
|
834 NC_002945.4 839098 . N . . . . GT ./.
|
|
|
835 NC_002945.4 839099 . N . . . . GT ./.
|
|
|
836 NC_002945.4 839100 . N . . . . GT ./.
|
|
|
837 NC_002945.4 839101 . N . . . . GT ./.
|
|
|
838 NC_002945.4 839102 . N . . . . GT ./.
|
|
|
839 NC_002945.4 839103 . N . . . . GT ./.
|
|
|
840 NC_002945.4 839104 . N . . . . GT ./.
|
|
|
841 NC_002945.4 839105 . N . . . . GT ./.
|
|
|
842 NC_002945.4 839106 . N . . . . GT ./.
|
|
|
843 NC_002945.4 839107 . N . . . . GT ./.
|
|
|
844 NC_002945.4 839108 . N . . . . GT ./.
|
|
|
845 NC_002945.4 839109 . N . . . . GT ./.
|
|
|
846 NC_002945.4 839110 . N . . . . GT ./.
|
|
|
847 NC_002945.4 839111 . N . . . . GT ./.
|
|
|
848 NC_002945.4 839112 . N . . . . GT ./.
|
|
|
849 NC_002945.4 839113 . N . . . . GT ./.
|
|
|
850 NC_002945.4 839114 . N . . . . GT ./.
|
|
|
851 NC_002945.4 839115 . N . . . . GT ./.
|
|
|
852 NC_002945.4 839116 . N . . . . GT ./.
|
|
|
853 NC_002945.4 839117 . N . . . . GT ./.
|
|
|
854 NC_002945.4 839118 . N . . . . GT ./.
|
|
|
855 NC_002945.4 839119 . N . . . . GT ./.
|
|
|
856 NC_002945.4 839120 . N . . . . GT ./.
|
|
|
857 NC_002945.4 839121 . N . . . . GT ./.
|
|
|
858 NC_002945.4 839122 . N . . . . GT ./.
|
|
|
859 NC_002945.4 839123 . N . . . . GT ./.
|
|
|
860 NC_002945.4 839124 . N . . . . GT ./.
|
|
|
861 NC_002945.4 839125 . N . . . . GT ./.
|
|
|
862 NC_002945.4 839126 . N . . . . GT ./.
|
|
|
863 NC_002945.4 839127 . N . . . . GT ./.
|
|
|
864 NC_002945.4 839128 . N . . . . GT ./.
|
|
|
865 NC_002945.4 839129 . N . . . . GT ./.
|
|
|
866 NC_002945.4 839130 . N . . . . GT ./.
|
|
|
867 NC_002945.4 839131 . N . . . . GT ./.
|
|
|
868 NC_002945.4 839132 . N . . . . GT ./.
|
|
|
869 NC_002945.4 839133 . N . . . . GT ./.
|
|
|
870 NC_002945.4 839134 . N . . . . GT ./.
|
|
|
871 NC_002945.4 839135 . N . . . . GT ./.
|
|
|
872 NC_002945.4 839136 . N . . . . GT ./.
|
|
|
873 NC_002945.4 839137 . N . . . . GT ./.
|
|
|
874 NC_002945.4 839138 . N . . . . GT ./.
|
|
|
875 NC_002945.4 839139 . N . . . . GT ./.
|
|
|
876 NC_002945.4 839140 . N . . . . GT ./.
|
|
|
877 NC_002945.4 839141 . N . . . . GT ./.
|
|
|
878 NC_002945.4 839142 . N . . . . GT ./.
|
|
|
879 NC_002945.4 839143 . N . . . . GT ./.
|
|
|
880 NC_002945.4 839144 . N . . . . GT ./.
|
|
|
881 NC_002945.4 839145 . N . . . . GT ./.
|
|
|
882 NC_002945.4 839146 . N . . . . GT ./.
|
|
|
883 NC_002945.4 839147 . N . . . . GT ./.
|
|
|
884 NC_002945.4 839148 . N . . . . GT ./.
|
|
|
885 NC_002945.4 839149 . N . . . . GT ./.
|
|
|
886 NC_002945.4 839150 . N . . . . GT ./.
|
|
|
887 NC_002945.4 839151 . N . . . . GT ./.
|
|
|
888 NC_002945.4 839152 . N . . . . GT ./.
|
|
|
889 NC_002945.4 839153 . N . . . . GT ./.
|
|
|
890 NC_002945.4 839154 . N . . . . GT ./.
|
|
|
891 NC_002945.4 839155 . N . . . . GT ./.
|
|
|
892 NC_002945.4 839156 . N . . . . GT ./.
|
|
|
893 NC_002945.4 839157 . N . . . . GT ./.
|
|
|
894 NC_002945.4 839308 . A G 193.84 . AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.31;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:222,18,0
|
|
|
895 NC_002945.4 839562 . N . . . . GT ./.
|
|
|
896 NC_002945.4 839563 . N . . . . GT ./.
|
|
|
897 NC_002945.4 839564 . N . . . . GT ./.
|
|
|
898 NC_002945.4 839565 . N . . . . GT ./.
|
|
|
899 NC_002945.4 839566 . N . . . . GT ./.
|
|
|
900 NC_002945.4 839567 . N . . . . GT ./.
|
|
|
901 NC_002945.4 839568 . N . . . . GT ./.
|
|
|
902 NC_002945.4 839569 . N . . . . GT ./.
|
|
|
903 NC_002945.4 839570 . N . . . . GT ./.
|
|
|
904 NC_002945.4 839571 . N . . . . GT ./.
|
|
|
905 NC_002945.4 839572 . N . . . . GT ./.
|
|
|
906 NC_002945.4 839573 . N . . . . GT ./.
|
|
|
907 NC_002945.4 839574 . N . . . . GT ./.
|
|
|
908 NC_002945.4 839575 . N . . . . GT ./.
|
|
|
909 NC_002945.4 839576 . N . . . . GT ./.
|
|
|
910 NC_002945.4 839577 . N . . . . GT ./.
|
|
|
911 NC_002945.4 839578 . N . . . . GT ./.
|
|
|
912 NC_002945.4 839579 . N . . . . GT ./.
|
|
|
913 NC_002945.4 839580 . N . . . . GT ./.
|
|
|
914 NC_002945.4 839581 . N . . . . GT ./.
|
|
|
915 NC_002945.4 839582 . N . . . . GT ./.
|
|
|
916 NC_002945.4 839583 . N . . . . GT ./.
|
|
|
917 NC_002945.4 839584 . N . . . . GT ./.
|
|
|
918 NC_002945.4 839585 . N . . . . GT ./.
|
|
|
919 NC_002945.4 839586 . N . . . . GT ./.
|
|
|
920 NC_002945.4 839587 . N . . . . GT ./.
|
|
|
921 NC_002945.4 839588 . N . . . . GT ./.
|
|
|
922 NC_002945.4 839589 . N . . . . GT ./.
|
|
|
923 NC_002945.4 839590 . N . . . . GT ./.
|
|
|
924 NC_002945.4 839591 . N . . . . GT ./.
|
|
|
925 NC_002945.4 839592 . N . . . . GT ./.
|
|
|
926 NC_002945.4 839593 . N . . . . GT ./.
|
|
|
927 NC_002945.4 839594 . N . . . . GT ./.
|
|
|
928 NC_002945.4 839595 . N . . . . GT ./.
|
|
|
929 NC_002945.4 839596 . N . . . . GT ./.
|
|
|
930 NC_002945.4 839597 . N . . . . GT ./.
|
|
|
931 NC_002945.4 839598 . N . . . . GT ./.
|
|
|
932 NC_002945.4 839599 . N . . . . GT ./.
|
|
|
933 NC_002945.4 839600 . N . . . . GT ./.
|
|
|
934 NC_002945.4 839601 . N . . . . GT ./.
|
|
|
935 NC_002945.4 839602 . N . . . . GT ./.
|
|
|
936 NC_002945.4 839603 . N . . . . GT ./.
|
|
|
937 NC_002945.4 839604 . N . . . . GT ./.
|
|
|
938 NC_002945.4 839605 . N . . . . GT ./.
|
|
|
939 NC_002945.4 839606 . N . . . . GT ./.
|
|
|
940 NC_002945.4 839607 . N . . . . GT ./.
|
|
|
941 NC_002945.4 839608 . N . . . . GT ./.
|
|
|
942 NC_002945.4 839609 . N . . . . GT ./.
|
|
|
943 NC_002945.4 839610 . N . . . . GT ./.
|
|
|
944 NC_002945.4 839611 . N . . . . GT ./.
|
|
|
945 NC_002945.4 839612 . N . . . . GT ./.
|
|
|
946 NC_002945.4 839613 . N . . . . GT ./.
|
|
|
947 NC_002945.4 839614 . N . . . . GT ./.
|
|
|
948 NC_002945.4 839615 . N . . . . GT ./.
|
|
|
949 NC_002945.4 839616 . N . . . . GT ./.
|
|
|
950 NC_002945.4 839617 . N . . . . GT ./.
|
|
|
951 NC_002945.4 839618 . N . . . . GT ./.
|
|
|
952 NC_002945.4 839619 . N . . . . GT ./.
|
|
|
953 NC_002945.4 839620 . N . . . . GT ./.
|
|
|
954 NC_002945.4 839621 . N . . . . GT ./.
|
|
|
955 NC_002945.4 839622 . N . . . . GT ./.
|
|
|
956 NC_002945.4 839623 . N . . . . GT ./.
|
|
|
957 NC_002945.4 840852 . N . . . . GT ./.
|
|
|
958 NC_002945.4 840853 . N . . . . GT ./.
|
|
|
959 NC_002945.4 840854 . N . . . . GT ./.
|
|
|
960 NC_002945.4 840855 . N . . . . GT ./.
|
|
|
961 NC_002945.4 840856 . N . . . . GT ./.
|
|
|
962 NC_002945.4 840857 . N . . . . GT ./.
|
|
|
963 NC_002945.4 840858 . N . . . . GT ./.
|
|
|
964 NC_002945.4 840859 . N . . . . GT ./.
|
|
|
965 NC_002945.4 840860 . N . . . . GT ./.
|
|
|
966 NC_002945.4 840861 . N . . . . GT ./.
|
|
|
967 NC_002945.4 840862 . N . . . . GT ./.
|
|
|
968 NC_002945.4 840863 . N . . . . GT ./.
|
|
|
969 NC_002945.4 840864 . N . . . . GT ./.
|
|
|
970 NC_002945.4 840865 . N . . . . GT ./.
|
|
|
971 NC_002945.4 840866 . N . . . . GT ./.
|
|
|
972 NC_002945.4 840867 . N . . . . GT ./.
|
|
|
973 NC_002945.4 840868 . N . . . . GT ./.
|
|
|
974 NC_002945.4 840869 . N . . . . GT ./.
|
|
|
975 NC_002945.4 840870 . N . . . . GT ./.
|
|
|
976 NC_002945.4 840871 . N . . . . GT ./.
|
|
|
977 NC_002945.4 840872 . N . . . . GT ./.
|
|
|
978 NC_002945.4 840873 . N . . . . GT ./.
|
|
|
979 NC_002945.4 840874 . N . . . . GT ./.
|
|
|
980 NC_002945.4 840875 . N . . . . GT ./.
|
|
|
981 NC_002945.4 840876 . N . . . . GT ./.
|
|
|
982 NC_002945.4 840877 . N . . . . GT ./.
|
|
|
983 NC_002945.4 840878 . N . . . . GT ./.
|
|
|
984 NC_002945.4 840879 . N . . . . GT ./.
|
|
|
985 NC_002945.4 840880 . N . . . . GT ./.
|
|
|
986 NC_002945.4 840881 . N . . . . GT ./.
|
|
|
987 NC_002945.4 840882 . N . . . . GT ./.
|
|
|
988 NC_002945.4 840883 . N . . . . GT ./.
|
|
|
989 NC_002945.4 840884 . N . . . . GT ./.
|
|
|
990 NC_002945.4 840885 . N . . . . GT ./.
|
|
|
991 NC_002945.4 840886 . N . . . . GT ./.
|
|
|
992 NC_002945.4 840887 . N . . . . GT ./.
|
|
|
993 NC_002945.4 840888 . N . . . . GT ./.
|
|
|
994 NC_002945.4 840889 . N . . . . GT ./.
|
|
|
995 NC_002945.4 840890 . N . . . . GT ./.
|
|
|
996 NC_002945.4 840891 . N . . . . GT ./.
|
|
|
997 NC_002945.4 840892 . N . . . . GT ./.
|
|
|
998 NC_002945.4 840893 . N . . . . GT ./.
|
|
|
999 NC_002945.4 840894 . N . . . . GT ./.
|
|
|
1000 NC_002945.4 840895 . N . . . . GT ./.
|
|
|
1001 NC_002945.4 840896 . N . . . . GT ./.
|
|
|
1002 NC_002945.4 840897 . N . . . . GT ./.
|
|
|
1003 NC_002945.4 840898 . N . . . . GT ./.
|
|
|
1004 NC_002945.4 840899 . N . . . . GT ./.
|
|
|
1005 NC_002945.4 840900 . N . . . . GT ./.
|
|
|
1006 NC_002945.4 840901 . N . . . . GT ./.
|
|
|
1007 NC_002945.4 840902 . N . . . . GT ./.
|
|
|
1008 NC_002945.4 840903 . N . . . . GT ./.
|
|
|
1009 NC_002945.4 840904 . N . . . . GT ./.
|
|
|
1010 NC_002945.4 840905 . N . . . . GT ./.
|
|
|
1011 NC_002945.4 840906 . N . . . . GT ./.
|
|
|
1012 NC_002945.4 840907 . N . . . . GT ./.
|
|
|
1013 NC_002945.4 840908 . N . . . . GT ./.
|
|
|
1014 NC_002945.4 840909 . N . . . . GT ./.
|
|
|
1015 NC_002945.4 840910 . N . . . . GT ./.
|
|
|
1016 NC_002945.4 840911 . N . . . . GT ./.
|
|
|
1017 NC_002945.4 840912 . N . . . . GT ./.
|
|
|
1018 NC_002945.4 840913 . N . . . . GT ./.
|
|
|
1019 NC_002945.4 840914 . N . . . . GT ./.
|
|
|
1020 NC_002945.4 840915 . N . . . . GT ./.
|
|
|
1021 NC_002945.4 840916 . N . . . . GT ./.
|
|
|
1022 NC_002945.4 840917 . N . . . . GT ./.
|
|
|
1023 NC_002945.4 840918 . N . . . . GT ./.
|
|
|
1024 NC_002945.4 840919 . N . . . . GT ./.
|
|
|
1025 NC_002945.4 840920 . N . . . . GT ./.
|
|
|
1026 NC_002945.4 840921 . N . . . . GT ./.
|
|
|
1027 NC_002945.4 840922 . N . . . . GT ./.
|
|
|
1028 NC_002945.4 840923 . N . . . . GT ./.
|
|
|
1029 NC_002945.4 840924 . N . . . . GT ./.
|
|
|
1030 NC_002945.4 840925 . N . . . . GT ./.
|
|
|
1031 NC_002945.4 840991 . N . . . . GT ./.
|
|
|
1032 NC_002945.4 840992 . N . . . . GT ./.
|
|
|
1033 NC_002945.4 840993 . N . . . . GT ./.
|
|
|
1034 NC_002945.4 840994 . N . . . . GT ./.
|
|
|
1035 NC_002945.4 840995 . N . . . . GT ./.
|
|
|
1036 NC_002945.4 840996 . N . . . . GT ./.
|
|
|
1037 NC_002945.4 840997 . N . . . . GT ./.
|
|
|
1038 NC_002945.4 840998 . N . . . . GT ./.
|
|
|
1039 NC_002945.4 840999 . N . . . . GT ./.
|
|
|
1040 NC_002945.4 841000 . N . . . . GT ./.
|
|
|
1041 NC_002945.4 841001 . N . . . . GT ./.
|
|
|
1042 NC_002945.4 841002 . N . . . . GT ./.
|
|
|
1043 NC_002945.4 841003 . N . . . . GT ./.
|
|
|
1044 NC_002945.4 841004 . N . . . . GT ./.
|
|
|
1045 NC_002945.4 841005 . N . . . . GT ./.
|
|
|
1046 NC_002945.4 841006 . N . . . . GT ./.
|
|
|
1047 NC_002945.4 841007 . N . . . . GT ./.
|
|
|
1048 NC_002945.4 841008 . N . . . . GT ./.
|
|
|
1049 NC_002945.4 841009 . N . . . . GT ./.
|
|
|
1050 NC_002945.4 841010 . N . . . . GT ./.
|
|
|
1051 NC_002945.4 841011 . N . . . . GT ./.
|
|
|
1052 NC_002945.4 841012 . N . . . . GT ./.
|
|
|
1053 NC_002945.4 841013 . N . . . . GT ./.
|
|
|
1054 NC_002945.4 841014 . N . . . . GT ./.
|
|
|
1055 NC_002945.4 841015 . N . . . . GT ./.
|
|
|
1056 NC_002945.4 841016 . N . . . . GT ./.
|
|
|
1057 NC_002945.4 841017 . N . . . . GT ./.
|
|
|
1058 NC_002945.4 841018 . N . . . . GT ./.
|
|
|
1059 NC_002945.4 841019 . N . . . . GT ./.
|
|
|
1060 NC_002945.4 841020 . N . . . . GT ./.
|
|
|
1061 NC_002945.4 841021 . N . . . . GT ./.
|
|
|
1062 NC_002945.4 841022 . N . . . . GT ./.
|
|
|
1063 NC_002945.4 841023 . N . . . . GT ./.
|
|
|
1064 NC_002945.4 841024 . N . . . . GT ./.
|
|
|
1065 NC_002945.4 841025 . N . . . . GT ./.
|
|
|
1066 NC_002945.4 841026 . N . . . . GT ./.
|
|
|
1067 NC_002945.4 841027 . N . . . . GT ./.
|
|
|
1068 NC_002945.4 841028 . N . . . . GT ./.
|
|
|
1069 NC_002945.4 841029 . N . . . . GT ./.
|
|
|
1070 NC_002945.4 841030 . N . . . . GT ./.
|
|
|
1071 NC_002945.4 841031 . N . . . . GT ./.
|
|
|
1072 NC_002945.4 841032 . N . . . . GT ./.
|
|
|
1073 NC_002945.4 841033 . N . . . . GT ./.
|
|
|
1074 NC_002945.4 841034 . N . . . . GT ./.
|
|
|
1075 NC_002945.4 841035 . N . . . . GT ./.
|
|
|
1076 NC_002945.4 841036 . N . . . . GT ./.
|
|
|
1077 NC_002945.4 841037 . N . . . . GT ./.
|
|
|
1078 NC_002945.4 841038 . N . . . . GT ./.
|
|
|
1079 NC_002945.4 841039 . N . . . . GT ./.
|
|
|
1080 NC_002945.4 841040 . N . . . . GT ./.
|
|
|
1081 NC_002945.4 841041 . N . . . . GT ./.
|
|
|
1082 NC_002945.4 841042 . N . . . . GT ./.
|
|
|
1083 NC_002945.4 841043 . N . . . . GT ./.
|
|
|
1084 NC_002945.4 841044 . N . . . . GT ./.
|
|
|
1085 NC_002945.4 841045 . N . . . . GT ./.
|
|
|
1086 NC_002945.4 841046 . N . . . . GT ./.
|
|
|
1087 NC_002945.4 841047 . N . . . . GT ./.
|
|
|
1088 NC_002945.4 841048 . N . . . . GT ./.
|
|
|
1089 NC_002945.4 841049 . N . . . . GT ./.
|
|
|
1090 NC_002945.4 841050 . N . . . . GT ./.
|
|
|
1091 NC_002945.4 841051 . N . . . . GT ./.
|
|
|
1092 NC_002945.4 841052 . N . . . . GT ./.
|
|
|
1093 NC_002945.4 841053 . N . . . . GT ./.
|
|
|
1094 NC_002945.4 841054 . N . . . . GT ./.
|
|
|
1095 NC_002945.4 841055 . N . . . . GT ./.
|
|
|
1096 NC_002945.4 841056 . N . . . . GT ./.
|
|
|
1097 NC_002945.4 841057 . N . . . . GT ./.
|
|
|
1098 NC_002945.4 841058 . N . . . . GT ./.
|
|
|
1099 NC_002945.4 841059 . N . . . . GT ./.
|
|
|
1100 NC_002945.4 841060 . N . . . . GT ./.
|
|
|
1101 NC_002945.4 841061 . N . . . . GT ./.
|
|
|
1102 NC_002945.4 841062 . N . . . . GT ./.
|
|
|
1103 NC_002945.4 841063 . N . . . . GT ./.
|
|
|
1104 NC_002945.4 841064 . N . . . . GT ./.
|
|
|
1105 NC_002945.4 841065 . N . . . . GT ./.
|
|
|
1106 NC_002945.4 841066 . N . . . . GT ./.
|
|
|
1107 NC_002945.4 841067 . N . . . . GT ./.
|
|
|
1108 NC_002945.4 841068 . N . . . . GT ./.
|
|
|
1109 NC_002945.4 841069 . N . . . . GT ./.
|
|
|
1110 NC_002945.4 841070 . N . . . . GT ./.
|
|
|
1111 NC_002945.4 841071 . N . . . . GT ./.
|
|
|
1112 NC_002945.4 841072 . N . . . . GT ./.
|
|
|
1113 NC_002945.4 841073 . N . . . . GT ./.
|
|
|
1114 NC_002945.4 841074 . N . . . . GT ./.
|
|
|
1115 NC_002945.4 841075 . N . . . . GT ./.
|
|
|
1116 NC_002945.4 841076 . N . . . . GT ./.
|
|
|
1117 NC_002945.4 841077 . N . . . . GT ./.
|
|
|
1118 NC_002945.4 841078 . N . . . . GT ./.
|
|
|
1119 NC_002945.4 841079 . N . . . . GT ./.
|
|
|
1120 NC_002945.4 841080 . N . . . . GT ./.
|
|
|
1121 NC_002945.4 841081 . N . . . . GT ./.
|
|
|
1122 NC_002945.4 841082 . N . . . . GT ./.
|
|
|
1123 NC_002945.4 841083 . N . . . . GT ./.
|
|
|
1124 NC_002945.4 841084 . N . . . . GT ./.
|
|
|
1125 NC_002945.4 841085 . N . . . . GT ./.
|
|
|
1126 NC_002945.4 841086 . N . . . . GT ./.
|
|
|
1127 NC_002945.4 841087 . N . . . . GT ./.
|
|
|
1128 NC_002945.4 841088 . N . . . . GT ./.
|
|
|
1129 NC_002945.4 841089 . N . . . . GT ./.
|
|
|
1130 NC_002945.4 841090 . N . . . . GT ./.
|
|
|
1131 NC_002945.4 841091 . N . . . . GT ./.
|
|
|
1132 NC_002945.4 841092 . N . . . . GT ./.
|
|
|
1133 NC_002945.4 841093 . N . . . . GT ./.
|
|
|
1134 NC_002945.4 841094 . N . . . . GT ./.
|
|
|
1135 NC_002945.4 841095 . N . . . . GT ./.
|
|
|
1136 NC_002945.4 841096 . N . . . . GT ./.
|
|
|
1137 NC_002945.4 841097 . N . . . . GT ./.
|
|
|
1138 NC_002945.4 841098 . N . . . . GT ./.
|
|
|
1139 NC_002945.4 841099 . N . . . . GT ./.
|
|
|
1140 NC_002945.4 841100 . N . . . . GT ./.
|
|
|
1141 NC_002945.4 841101 . N . . . . GT ./.
|
|
|
1142 NC_002945.4 841102 . N . . . . GT ./.
|
|
|
1143 NC_002945.4 841182 . N . . . . GT ./.
|
|
|
1144 NC_002945.4 841183 . N . . . . GT ./.
|
|
|
1145 NC_002945.4 841184 . N . . . . GT ./.
|
|
|
1146 NC_002945.4 841185 . N . . . . GT ./.
|
|
|
1147 NC_002945.4 841186 . N . . . . GT ./.
|
|
|
1148 NC_002945.4 841187 . N . . . . GT ./.
|
|
|
1149 NC_002945.4 841188 . N . . . . GT ./.
|
|
|
1150 NC_002945.4 841189 . N . . . . GT ./.
|
|
|
1151 NC_002945.4 841190 . N . . . . GT ./.
|
|
|
1152 NC_002945.4 841191 . N . . . . GT ./.
|
|
|
1153 NC_002945.4 841192 . N . . . . GT ./.
|
|
|
1154 NC_002945.4 841193 . N . . . . GT ./.
|
|
|
1155 NC_002945.4 841194 . N . . . . GT ./.
|
|
|
1156 NC_002945.4 841195 . N . . . . GT ./.
|
|
|
1157 NC_002945.4 841196 . N . . . . GT ./.
|
|
|
1158 NC_002945.4 841197 . N . . . . GT ./.
|
|
|
1159 NC_002945.4 841198 . N . . . . GT ./.
|
|
|
1160 NC_002945.4 841199 . N . . . . GT ./.
|
|
|
1161 NC_002945.4 841200 . N . . . . GT ./.
|
|
|
1162 NC_002945.4 841201 . N . . . . GT ./.
|
|
|
1163 NC_002945.4 841202 . N . . . . GT ./.
|
|
|
1164 NC_002945.4 841203 . N . . . . GT ./.
|
|
|
1165 NC_002945.4 841204 . N . . . . GT ./.
|
|
|
1166 NC_002945.4 841205 . N . . . . GT ./.
|
|
|
1167 NC_002945.4 841206 . N . . . . GT ./.
|
|
|
1168 NC_002945.4 841207 . N . . . . GT ./.
|
|
|
1169 NC_002945.4 841208 . N . . . . GT ./.
|
|
|
1170 NC_002945.4 841209 . N . . . . GT ./.
|
|
|
1171 NC_002945.4 841210 . N . . . . GT ./.
|
|
|
1172 NC_002945.4 841211 . N . . . . GT ./.
|
|
|
1173 NC_002945.4 841212 . N . . . . GT ./.
|
|
|
1174 NC_002945.4 841213 . N . . . . GT ./.
|
|
|
1175 NC_002945.4 841214 . N . . . . GT ./.
|
|
|
1176 NC_002945.4 841215 . N . . . . GT ./.
|
|
|
1177 NC_002945.4 841216 . N . . . . GT ./.
|
|
|
1178 NC_002945.4 841217 . N . . . . GT ./.
|
|
|
1179 NC_002945.4 841218 . N . . . . GT ./.
|
|
|
1180 NC_002945.4 841219 . N . . . . GT ./.
|
|
|
1181 NC_002945.4 841220 . N . . . . GT ./.
|
|
|
1182 NC_002945.4 841221 . N . . . . GT ./.
|
|
|
1183 NC_002945.4 841222 . N . . . . GT ./.
|
|
|
1184 NC_002945.4 841223 . N . . . . GT ./.
|
|
|
1185 NC_002945.4 841224 . N . . . . GT ./.
|
|
|
1186 NC_002945.4 841225 . N . . . . GT ./.
|
|
|
1187 NC_002945.4 841226 . N . . . . GT ./.
|
|
|
1188 NC_002945.4 841227 . N . . . . GT ./.
|
|
|
1189 NC_002945.4 841228 . N . . . . GT ./.
|
|
|
1190 NC_002945.4 841229 . N . . . . GT ./.
|
|
|
1191 NC_002945.4 841230 . N . . . . GT ./.
|
|
|
1192 NC_002945.4 841231 . N . . . . GT ./.
|
|
|
1193 NC_002945.4 841232 . N . . . . GT ./.
|
|
|
1194 NC_002945.4 841233 . N . . . . GT ./.
|
|
|
1195 NC_002945.4 841234 . N . . . . GT ./.
|
|
|
1196 NC_002945.4 841235 . N . . . . GT ./.
|
|
|
1197 NC_002945.4 841236 . N . . . . GT ./.
|
|
|
1198 NC_002945.4 841237 . N . . . . GT ./.
|
|
|
1199 NC_002945.4 841238 . N . . . . GT ./.
|
|
|
1200 NC_002945.4 841239 . N . . . . GT ./.
|
|
|
1201 NC_002945.4 841240 . N . . . . GT ./.
|
|
|
1202 NC_002945.4 841241 . N . . . . GT ./.
|
|
|
1203 NC_002945.4 841242 . N . . . . GT ./.
|
|
|
1204 NC_002945.4 841243 . N . . . . GT ./.
|
|
|
1205 NC_002945.4 841244 . N . . . . GT ./.
|
|
|
1206 NC_002945.4 841245 . N . . . . GT ./.
|
|
|
1207 NC_002945.4 841246 . N . . . . GT ./.
|
|
|
1208 NC_002945.4 841247 . N . . . . GT ./.
|
|
|
1209 NC_002945.4 841248 . N . . . . GT ./.
|
|
|
1210 NC_002945.4 841249 . N . . . . GT ./.
|
|
|
1211 NC_002945.4 841250 . N . . . . GT ./.
|
|
|
1212 NC_002945.4 841251 . N . . . . GT ./.
|
|
|
1213 NC_002945.4 841252 . N . . . . GT ./.
|
|
|
1214 NC_002945.4 841253 . N . . . . GT ./.
|
|
|
1215 NC_002945.4 841254 . N . . . . GT ./.
|
|
|
1216 NC_002945.4 841255 . N . . . . GT ./.
|
|
|
1217 NC_002945.4 841256 . N . . . . GT ./.
|
|
|
1218 NC_002945.4 841257 . N . . . . GT ./.
|
|
|
1219 NC_002945.4 841330 . N . . . . GT ./.
|
|
|
1220 NC_002945.4 841331 . N . . . . GT ./.
|
|
|
1221 NC_002945.4 841332 . N . . . . GT ./.
|
|
|
1222 NC_002945.4 842150 . N . . . . GT ./.
|
|
|
1223 NC_002945.4 842151 . N . . . . GT ./.
|
|
|
1224 NC_002945.4 842152 . N . . . . GT ./.
|
|
|
1225 NC_002945.4 842153 . N . . . . GT ./.
|
|
|
1226 NC_002945.4 842154 . N . . . . GT ./.
|
|
|
1227 NC_002945.4 842155 . N . . . . GT ./.
|
|
|
1228 NC_002945.4 842156 . N . . . . GT ./.
|
|
|
1229 NC_002945.4 842157 . N . . . . GT ./.
|
|
|
1230 NC_002945.4 842158 . N . . . . GT ./.
|
|
|
1231 NC_002945.4 842159 . N . . . . GT ./.
|
|
|
1232 NC_002945.4 842160 . N . . . . GT ./.
|
|
|
1233 NC_002945.4 842161 . N . . . . GT ./.
|
|
|
1234 NC_002945.4 842162 . N . . . . GT ./.
|
|
|
1235 NC_002945.4 842163 . N . . . . GT ./.
|
|
|
1236 NC_002945.4 842164 . N . . . . GT ./.
|
|
|
1237 NC_002945.4 842165 . N . . . . GT ./.
|
|
|
1238 NC_002945.4 842166 . N . . . . GT ./.
|
|
|
1239 NC_002945.4 842167 . N . . . . GT ./.
|
|
|
1240 NC_002945.4 842168 . N . . . . GT ./.
|
|
|
1241 NC_002945.4 842169 . N . . . . GT ./.
|
|
|
1242 NC_002945.4 842170 . N . . . . GT ./.
|
|
|
1243 NC_002945.4 842171 . N . . . . GT ./.
|
|
|
1244 NC_002945.4 842172 . N . . . . GT ./.
|
|
|
1245 NC_002945.4 842173 . N . . . . GT ./.
|
|
|
1246 NC_002945.4 842174 . N . . . . GT ./.
|
|
|
1247 NC_002945.4 842175 . N . . . . GT ./.
|
|
|
1248 NC_002945.4 842176 . N . . . . GT ./.
|
|
|
1249 NC_002945.4 842177 . N . . . . GT ./.
|
|
|
1250 NC_002945.4 842178 . N . . . . GT ./.
|
|
|
1251 NC_002945.4 842179 . N . . . . GT ./.
|
|
|
1252 NC_002945.4 842180 . N . . . . GT ./.
|
|
|
1253 NC_002945.4 842181 . N . . . . GT ./.
|
|
|
1254 NC_002945.4 842182 . N . . . . GT ./.
|
|
|
1255 NC_002945.4 842183 . N . . . . GT ./.
|
|
|
1256 NC_002945.4 842184 . N . . . . GT ./.
|
|
|
1257 NC_002945.4 842185 . N . . . . GT ./.
|
|
|
1258 NC_002945.4 842186 . N . . . . GT ./.
|
|
|
1259 NC_002945.4 842187 . N . . . . GT ./.
|
|
|
1260 NC_002945.4 842188 . N . . . . GT ./.
|
|
|
1261 NC_002945.4 842208 . N . . . . GT ./.
|
|
|
1262 NC_002945.4 842209 . N . . . . GT ./.
|
|
|
1263 NC_002945.4 842210 . N . . . . GT ./.
|
|
|
1264 NC_002945.4 842211 . N . . . . GT ./.
|
|
|
1265 NC_002945.4 842212 . N . . . . GT ./.
|
|
|
1266 NC_002945.4 842213 . N . . . . GT ./.
|
|
|
1267 NC_002945.4 842362 . N . . . . GT ./.
|
|
|
1268 NC_002945.4 842363 . N . . . . GT ./.
|
|
|
1269 NC_002945.4 842364 . N . . . . GT ./.
|
|
|
1270 NC_002945.4 842365 . N . . . . GT ./.
|
|
|
1271 NC_002945.4 842366 . N . . . . GT ./.
|
|
|
1272 NC_002945.4 842367 . N . . . . GT ./.
|
|
|
1273 NC_002945.4 842368 . N . . . . GT ./.
|
|
|
1274 NC_002945.4 842369 . N . . . . GT ./.
|
|
|
1275 NC_002945.4 842370 . N . . . . GT ./.
|
|
|
1276 NC_002945.4 842371 . N . . . . GT ./.
|
|
|
1277 NC_002945.4 842372 . N . . . . GT ./.
|
|
|
1278 NC_002945.4 842373 . N . . . . GT ./.
|
|
|
1279 NC_002945.4 842374 . N . . . . GT ./.
|
|
|
1280 NC_002945.4 842375 . N . . . . GT ./.
|
|
|
1281 NC_002945.4 842376 . N . . . . GT ./.
|
|
|
1282 NC_002945.4 842377 . N . . . . GT ./.
|
|
|
1283 NC_002945.4 842378 . N . . . . GT ./.
|
|
|
1284 NC_002945.4 842379 . N . . . . GT ./.
|
|
|
1285 NC_002945.4 842380 . N . . . . GT ./.
|
|
|
1286 NC_002945.4 842381 . N . . . . GT ./.
|
|
|
1287 NC_002945.4 842382 . N . . . . GT ./.
|
|
|
1288 NC_002945.4 842383 . N . . . . GT ./.
|
|
|
1289 NC_002945.4 842384 . N . . . . GT ./.
|
|
|
1290 NC_002945.4 842385 . N . . . . GT ./.
|
|
|
1291 NC_002945.4 842386 . N . . . . GT ./.
|
|
|
1292 NC_002945.4 842387 . N . . . . GT ./.
|
|
|
1293 NC_002945.4 842388 . N . . . . GT ./.
|
|
|
1294 NC_002945.4 842389 . N . . . . GT ./.
|
|
|
1295 NC_002945.4 842390 . N . . . . GT ./.
|
|
|
1296 NC_002945.4 842391 . N . . . . GT ./.
|
|
|
1297 NC_002945.4 842392 . N . . . . GT ./.
|
|
|
1298 NC_002945.4 842393 . N . . . . GT ./.
|
|
|
1299 NC_002945.4 842394 . N . . . . GT ./.
|
|
|
1300 NC_002945.4 842395 . N . . . . GT ./.
|
|
|
1301 NC_002945.4 842396 . N . . . . GT ./.
|
|
|
1302 NC_002945.4 842397 . N . . . . GT ./.
|
|
|
1303 NC_002945.4 842398 . N . . . . GT ./.
|
|
|
1304 NC_002945.4 842399 . N . . . . GT ./.
|
|
|
1305 NC_002945.4 842400 . N . . . . GT ./.
|
|
|
1306 NC_002945.4 842401 . N . . . . GT ./.
|
|
|
1307 NC_002945.4 842402 . N . . . . GT ./.
|
|
|
1308 NC_002945.4 842403 . N . . . . GT ./.
|
|
|
1309 NC_002945.4 842404 . N . . . . GT ./.
|
|
|
1310 NC_002945.4 842405 . N . . . . GT ./.
|
|
|
1311 NC_002945.4 842406 . N . . . . GT ./.
|
|
|
1312 NC_002945.4 842407 . N . . . . GT ./.
|
|
|
1313 NC_002945.4 842408 . N . . . . GT ./.
|
|
|
1314 NC_002945.4 842409 . N . . . . GT ./.
|
|
|
1315 NC_002945.4 842410 . N . . . . GT ./.
|
|
|
1316 NC_002945.4 842411 . N . . . . GT ./.
|
|
|
1317 NC_002945.4 842412 . N . . . . GT ./.
|
|
|
1318 NC_002945.4 842413 . N . . . . GT ./.
|
|
|
1319 NC_002945.4 842414 . N . . . . GT ./.
|
|
|
1320 NC_002945.4 842415 . N . . . . GT ./.
|
|
|
1321 NC_002945.4 842416 . N . . . . GT ./.
|
|
|
1322 NC_002945.4 842417 . N . . . . GT ./.
|
|
|
1323 NC_002945.4 842418 . N . . . . GT ./.
|
|
|
1324 NC_002945.4 842419 . N . . . . GT ./.
|
|
|
1325 NC_002945.4 842420 . N . . . . GT ./.
|
|
|
1326 NC_002945.4 842421 . N . . . . GT ./.
|
|
|
1327 NC_002945.4 842422 . N . . . . GT ./.
|
|
|
1328 NC_002945.4 842423 . N . . . . GT ./.
|
|
|
1329 NC_002945.4 842424 . N . . . . GT ./.
|
|
|
1330 NC_002945.4 842425 . N . . . . GT ./.
|
|
|
1331 NC_002945.4 842426 . N . . . . GT ./.
|
|
|
1332 NC_002945.4 842427 . N . . . . GT ./.
|
|
|
1333 NC_002945.4 842428 . N . . . . GT ./.
|
|
|
1334 NC_002945.4 842429 . N . . . . GT ./.
|
|
|
1335 NC_002945.4 842430 . N . . . . GT ./.
|
|
|
1336 NC_002945.4 842431 . N . . . . GT ./.
|
|
|
1337 NC_002945.4 865821 . G T 5934.77 . AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,180:180:99:5963,537,0
|
|
|
1338 NC_002945.4 866123 . C T 5965.77 . AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,194:194:99:5994,578,0
|
|
|
1339 NC_002945.4 870116 . G T 4222.77 . AC=2;AF=1.00;AN=2;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.95;SOR=1.543 GT:AD:DP:GQ:PL 1/1:0,141:141:99:4251,421,0
|
|
|
1340 NC_002945.4 905912 . C G 6454.77 . AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.33;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,206:206:99:6483,612,0
|
|
|
1341 NC_002945.4 910013 . C T 3727.77 . AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.76;QD=32.42;SOR=1.549 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3756,344,0
|
|
|
1342 NC_002945.4 926006 . T C 2737.77 . AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.94;SOR=1.237 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2766,292,0
|
|
|
1343 NC_002945.4 926386 . N . . . . GT ./.
|
|
|
1344 NC_002945.4 926387 . N . . . . GT ./.
|
|
|
1345 NC_002945.4 926388 . N . . . . GT ./.
|
|
|
1346 NC_002945.4 926389 . N . . . . GT ./.
|
|
|
1347 NC_002945.4 926390 . N . . . . GT ./.
|
|
|
1348 NC_002945.4 926391 . N . . . . GT ./.
|
|
|
1349 NC_002945.4 926392 . N . . . . GT ./.
|
|
|
1350 NC_002945.4 926393 . N . . . . GT ./.
|
|
|
1351 NC_002945.4 926394 . N . . . . GT ./.
|
|
|
1352 NC_002945.4 926395 . N . . . . GT ./.
|
|
|
1353 NC_002945.4 926396 . N . . . . GT ./.
|
|
|
1354 NC_002945.4 926397 . N . . . . GT ./.
|
|
|
1355 NC_002945.4 926398 . N . . . . GT ./.
|
|
|
1356 NC_002945.4 926399 . N . . . . GT ./.
|
|
|
1357 NC_002945.4 926400 . N . . . . GT ./.
|
|
|
1358 NC_002945.4 926401 . N . . . . GT ./.
|
|
|
1359 NC_002945.4 926402 . N . . . . GT ./.
|
|
|
1360 NC_002945.4 926403 . N . . . . GT ./.
|
|
|
1361 NC_002945.4 926404 . N . . . . GT ./.
|
|
|
1362 NC_002945.4 926405 . N . . . . GT ./.
|
|
|
1363 NC_002945.4 926406 . N . . . . GT ./.
|
|
|
1364 NC_002945.4 926407 . N . . . . GT ./.
|
|
|
1365 NC_002945.4 926408 . N . . . . GT ./.
|
|
|
1366 NC_002945.4 926409 . N . . . . GT ./.
|
|
|
1367 NC_002945.4 926410 . N . . . . GT ./.
|
|
|
1368 NC_002945.4 926411 . N . . . . GT ./.
|
|
|
1369 NC_002945.4 926412 . N . . . . GT ./.
|
|
|
1370 NC_002945.4 926413 . N . . . . GT ./.
|
|
|
1371 NC_002945.4 926414 . N . . . . GT ./.
|
|
|
1372 NC_002945.4 926415 . N . . . . GT ./.
|
|
|
1373 NC_002945.4 926416 . N . . . . GT ./.
|
|
|
1374 NC_002945.4 926417 . N . . . . GT ./.
|
|
|
1375 NC_002945.4 926418 . N . . . . GT ./.
|
|
|
1376 NC_002945.4 926419 . N . . . . GT ./.
|
|
|
1377 NC_002945.4 926420 . N . . . . GT ./.
|
|
|
1378 NC_002945.4 926421 . N . . . . GT ./.
|
|
|
1379 NC_002945.4 926422 . N . . . . GT ./.
|
|
|
1380 NC_002945.4 926423 . N . . . . GT ./.
|
|
|
1381 NC_002945.4 926424 . N . . . . GT ./.
|
|
|
1382 NC_002945.4 926425 . N . . . . GT ./.
|
|
|
1383 NC_002945.4 926426 . N . . . . GT ./.
|
|
|
1384 NC_002945.4 926427 . N . . . . GT ./.
|
|
|
1385 NC_002945.4 926428 . N . . . . GT ./.
|
|
|
1386 NC_002945.4 926429 . N . . . . GT ./.
|
|
|
1387 NC_002945.4 926430 . N . . . . GT ./.
|
|
|
1388 NC_002945.4 926431 . N . . . . GT ./.
|
|
|
1389 NC_002945.4 926432 . N . . . . GT ./.
|
|
|
1390 NC_002945.4 926433 . N . . . . GT ./.
|
|
|
1391 NC_002945.4 926434 . N . . . . GT ./.
|
|
|
1392 NC_002945.4 926435 . N . . . . GT ./.
|
|
|
1393 NC_002945.4 926436 . N . . . . GT ./.
|
|
|
1394 NC_002945.4 926437 . N . . . . GT ./.
|
|
|
1395 NC_002945.4 926438 . N . . . . GT ./.
|
|
|
1396 NC_002945.4 926439 . N . . . . GT ./.
|
|
|
1397 NC_002945.4 926440 . N . . . . GT ./.
|
|
|
1398 NC_002945.4 926441 . N . . . . GT ./.
|
|
|
1399 NC_002945.4 926442 . N . . . . GT ./.
|
|
|
1400 NC_002945.4 926443 . N . . . . GT ./.
|
|
|
1401 NC_002945.4 926444 . N . . . . GT ./.
|
|
|
1402 NC_002945.4 926445 . N . . . . GT ./.
|
|
|
1403 NC_002945.4 926446 . N . . . . GT ./.
|
|
|
1404 NC_002945.4 926447 . N . . . . GT ./.
|
|
|
1405 NC_002945.4 926448 . N . . . . GT ./.
|
|
|
1406 NC_002945.4 926449 . N . . . . GT ./.
|
|
|
1407 NC_002945.4 926450 . N . . . . GT ./.
|
|
|
1408 NC_002945.4 926451 . N . . . . GT ./.
|
|
|
1409 NC_002945.4 926452 . N . . . . GT ./.
|
|
|
1410 NC_002945.4 926453 . N . . . . GT ./.
|
|
|
1411 NC_002945.4 926454 . N . . . . GT ./.
|
|
|
1412 NC_002945.4 926455 . N . . . . GT ./.
|
|
|
1413 NC_002945.4 926456 . N . . . . GT ./.
|
|
|
1414 NC_002945.4 926457 . N . . . . GT ./.
|
|
|
1415 NC_002945.4 926458 . N . . . . GT ./.
|
|
|
1416 NC_002945.4 926459 . N . . . . GT ./.
|
|
|
1417 NC_002945.4 926460 . N . . . . GT ./.
|
|
|
1418 NC_002945.4 926461 . N . . . . GT ./.
|
|
|
1419 NC_002945.4 926462 . N . . . . GT ./.
|
|
|
1420 NC_002945.4 926463 . N . . . . GT ./.
|
|
|
1421 NC_002945.4 926464 . N . . . . GT ./.
|
|
|
1422 NC_002945.4 926465 . N . . . . GT ./.
|
|
|
1423 NC_002945.4 926466 . N . . . . GT ./.
|
|
|
1424 NC_002945.4 926467 . N . . . . GT ./.
|
|
|
1425 NC_002945.4 926468 . N . . . . GT ./.
|
|
|
1426 NC_002945.4 926469 . N . . . . GT ./.
|
|
|
1427 NC_002945.4 926470 . N . . . . GT ./.
|
|
|
1428 NC_002945.4 926471 . N . . . . GT ./.
|
|
|
1429 NC_002945.4 926472 . N . . . . GT ./.
|
|
|
1430 NC_002945.4 926473 . N . . . . GT ./.
|
|
|
1431 NC_002945.4 926474 . N . . . . GT ./.
|
|
|
1432 NC_002945.4 926475 . N . . . . GT ./.
|
|
|
1433 NC_002945.4 926476 . N . . . . GT ./.
|
|
|
1434 NC_002945.4 926477 . N . . . . GT ./.
|
|
|
1435 NC_002945.4 926478 . N . . . . GT ./.
|
|
|
1436 NC_002945.4 926479 . N . . . . GT ./.
|
|
|
1437 NC_002945.4 926480 . N . . . . GT ./.
|
|
|
1438 NC_002945.4 926481 . N . . . . GT ./.
|
|
|
1439 NC_002945.4 926482 . N . . . . GT ./.
|
|
|
1440 NC_002945.4 926483 . N . . . . GT ./.
|
|
|
1441 NC_002945.4 926484 . N . . . . GT ./.
|
|
|
1442 NC_002945.4 926485 . N . . . . GT ./.
|
|
|
1443 NC_002945.4 926486 . N . . . . GT ./.
|
|
|
1444 NC_002945.4 926487 . N . . . . GT ./.
|
|
|
1445 NC_002945.4 926488 . N . . . . GT ./.
|
|
|
1446 NC_002945.4 926489 . N . . . . GT ./.
|
|
|
1447 NC_002945.4 926490 . N . . . . GT ./.
|
|
|
1448 NC_002945.4 926491 . N . . . . GT ./.
|
|
|
1449 NC_002945.4 926492 . N . . . . GT ./.
|
|
|
1450 NC_002945.4 926493 . N . . . . GT ./.
|
|
|
1451 NC_002945.4 926494 . N . . . . GT ./.
|
|
|
1452 NC_002945.4 926495 . N . . . . GT ./.
|
|
|
1453 NC_002945.4 926496 . N . . . . GT ./.
|
|
|
1454 NC_002945.4 926497 . N . . . . GT ./.
|
|
|
1455 NC_002945.4 926498 . N . . . . GT ./.
|
|
|
1456 NC_002945.4 926499 . N . . . . GT ./.
|
|
|
1457 NC_002945.4 926500 . N . . . . GT ./.
|
|
|
1458 NC_002945.4 926501 . N . . . . GT ./.
|
|
|
1459 NC_002945.4 926502 . N . . . . GT ./.
|
|
|
1460 NC_002945.4 926503 . N . . . . GT ./.
|
|
|
1461 NC_002945.4 926504 . N . . . . GT ./.
|
|
|
1462 NC_002945.4 926505 . N . . . . GT ./.
|
|
|
1463 NC_002945.4 926506 . N . . . . GT ./.
|
|
|
1464 NC_002945.4 926507 . N . . . . GT ./.
|
|
|
1465 NC_002945.4 926508 . N . . . . GT ./.
|
|
|
1466 NC_002945.4 926509 . N . . . . GT ./.
|
|
|
1467 NC_002945.4 926510 . N . . . . GT ./.
|
|
|
1468 NC_002945.4 926511 . N . . . . GT ./.
|
|
|
1469 NC_002945.4 926512 . N . . . . GT ./.
|
|
|
1470 NC_002945.4 926513 . N . . . . GT ./.
|
|
|
1471 NC_002945.4 926514 . N . . . . GT ./.
|
|
|
1472 NC_002945.4 926515 . N . . . . GT ./.
|
|
|
1473 NC_002945.4 926516 . N . . . . GT ./.
|
|
|
1474 NC_002945.4 926517 . N . . . . GT ./.
|
|
|
1475 NC_002945.4 926518 . N . . . . GT ./.
|
|
|
1476 NC_002945.4 926519 . N . . . . GT ./.
|
|
|
1477 NC_002945.4 926520 . N . . . . GT ./.
|
|
|
1478 NC_002945.4 926521 . N . . . . GT ./.
|
|
|
1479 NC_002945.4 926522 . N . . . . GT ./.
|
|
|
1480 NC_002945.4 926523 . N . . . . GT ./.
|
|
|
1481 NC_002945.4 926524 . N . . . . GT ./.
|
|
|
1482 NC_002945.4 926525 . N . . . . GT ./.
|
|
|
1483 NC_002945.4 926526 . N . . . . GT ./.
|
|
|
1484 NC_002945.4 926527 . N . . . . GT ./.
|
|
|
1485 NC_002945.4 926528 . N . . . . GT ./.
|
|
|
1486 NC_002945.4 926529 . N . . . . GT ./.
|
|
|
1487 NC_002945.4 926530 . N . . . . GT ./.
|
|
|
1488 NC_002945.4 926531 . N . . . . GT ./.
|
|
|
1489 NC_002945.4 926532 . N . . . . GT ./.
|
|
|
1490 NC_002945.4 926533 . N . . . . GT ./.
|
|
|
1491 NC_002945.4 926534 . N . . . . GT ./.
|
|
|
1492 NC_002945.4 926535 . N . . . . GT ./.
|
|
|
1493 NC_002945.4 926536 . N . . . . GT ./.
|
|
|
1494 NC_002945.4 926537 . N . . . . GT ./.
|
|
|
1495 NC_002945.4 926538 . N . . . . GT ./.
|
|
|
1496 NC_002945.4 926539 . N . . . . GT ./.
|
|
|
1497 NC_002945.4 926540 . N . . . . GT ./.
|
|
|
1498 NC_002945.4 926541 . N . . . . GT ./.
|
|
|
1499 NC_002945.4 926542 . N . . . . GT ./.
|
|
|
1500 NC_002945.4 926543 . N . . . . GT ./.
|
|
|
1501 NC_002945.4 926544 . N . . . . GT ./.
|
|
|
1502 NC_002945.4 926545 . N . . . . GT ./.
|
|
|
1503 NC_002945.4 926546 . N . . . . GT ./.
|
|
|
1504 NC_002945.4 926547 . N . . . . GT ./.
|
|
|
1505 NC_002945.4 926548 . N . . . . GT ./.
|
|
|
1506 NC_002945.4 926549 . N . . . . GT ./.
|
|
|
1507 NC_002945.4 926550 . N . . . . GT ./.
|
|
|
1508 NC_002945.4 926551 . N . . . . GT ./.
|
|
|
1509 NC_002945.4 926552 . N . . . . GT ./.
|
|
|
1510 NC_002945.4 926553 . N . . . . GT ./.
|
|
|
1511 NC_002945.4 926554 . N . . . . GT ./.
|
|
|
1512 NC_002945.4 926555 . N . . . . GT ./.
|
|
|
1513 NC_002945.4 926556 . N . . . . GT ./.
|
|
|
1514 NC_002945.4 926557 . N . . . . GT ./.
|
|
|
1515 NC_002945.4 926558 . N . . . . GT ./.
|
|
|
1516 NC_002945.4 926559 . N . . . . GT ./.
|
|
|
1517 NC_002945.4 926560 . N . . . . GT ./.
|
|
|
1518 NC_002945.4 926561 . N . . . . GT ./.
|
|
|
1519 NC_002945.4 926562 . N . . . . GT ./.
|
|
|
1520 NC_002945.4 926563 . N . . . . GT ./.
|
|
|
1521 NC_002945.4 926564 . N . . . . GT ./.
|
|
|
1522 NC_002945.4 926565 . N . . . . GT ./.
|
|
|
1523 NC_002945.4 926566 . N . . . . GT ./.
|
|
|
1524 NC_002945.4 926567 . N . . . . GT ./.
|
|
|
1525 NC_002945.4 926568 . N . . . . GT ./.
|
|
|
1526 NC_002945.4 926569 . N . . . . GT ./.
|
|
|
1527 NC_002945.4 926570 . N . . . . GT ./.
|
|
|
1528 NC_002945.4 926571 . N . . . . GT ./.
|
|
|
1529 NC_002945.4 926572 . N . . . . GT ./.
|
|
|
1530 NC_002945.4 926573 . N . . . . GT ./.
|
|
|
1531 NC_002945.4 926574 . N . . . . GT ./.
|
|
|
1532 NC_002945.4 926575 . N . . . . GT ./.
|
|
|
1533 NC_002945.4 926576 . N . . . . GT ./.
|
|
|
1534 NC_002945.4 926577 . N . . . . GT ./.
|
|
|
1535 NC_002945.4 926578 . N . . . . GT ./.
|
|
|
1536 NC_002945.4 926579 . N . . . . GT ./.
|
|
|
1537 NC_002945.4 926580 . N . . . . GT ./.
|
|
|
1538 NC_002945.4 926581 . N . . . . GT ./.
|
|
|
1539 NC_002945.4 926582 . N . . . . GT ./.
|
|
|
1540 NC_002945.4 926583 . N . . . . GT ./.
|
|
|
1541 NC_002945.4 926584 . N . . . . GT ./.
|
|
|
1542 NC_002945.4 926585 . N . . . . GT ./.
|
|
|
1543 NC_002945.4 926586 . N . . . . GT ./.
|
|
|
1544 NC_002945.4 926587 . N . . . . GT ./.
|
|
|
1545 NC_002945.4 926588 . N . . . . GT ./.
|
|
|
1546 NC_002945.4 926589 . N . . . . GT ./.
|
|
|
1547 NC_002945.4 926590 . N . . . . GT ./.
|
|
|
1548 NC_002945.4 926591 . N . . . . GT ./.
|
|
|
1549 NC_002945.4 926592 . N . . . . GT ./.
|
|
|
1550 NC_002945.4 926593 . N . . . . GT ./.
|
|
|
1551 NC_002945.4 926594 . N . . . . GT ./.
|
|
|
1552 NC_002945.4 926595 . N . . . . GT ./.
|
|
|
1553 NC_002945.4 926596 . N . . . . GT ./.
|
|
|
1554 NC_002945.4 926597 . N . . . . GT ./.
|
|
|
1555 NC_002945.4 926598 . N . . . . GT ./.
|
|
|
1556 NC_002945.4 926599 . N . . . . GT ./.
|
|
|
1557 NC_002945.4 926600 . N . . . . GT ./.
|
|
|
1558 NC_002945.4 926601 . N . . . . GT ./.
|
|
|
1559 NC_002945.4 926602 . N . . . . GT ./.
|
|
|
1560 NC_002945.4 926603 . N . . . . GT ./.
|
|
|
1561 NC_002945.4 926604 . N . . . . GT ./.
|
|
|
1562 NC_002945.4 926605 . N . . . . GT ./.
|
|
|
1563 NC_002945.4 926606 . N . . . . GT ./.
|
|
|
1564 NC_002945.4 926607 . N . . . . GT ./.
|
|
|
1565 NC_002945.4 926608 . N . . . . GT ./.
|
|
|
1566 NC_002945.4 926609 . N . . . . GT ./.
|
|
|
1567 NC_002945.4 926610 . N . . . . GT ./.
|
|
|
1568 NC_002945.4 926611 . N . . . . GT ./.
|
|
|
1569 NC_002945.4 926659 . N . . . . GT ./.
|
|
|
1570 NC_002945.4 926660 . N . . . . GT ./.
|
|
|
1571 NC_002945.4 926661 . N . . . . GT ./.
|
|
|
1572 NC_002945.4 926662 . N . . . . GT ./.
|
|
|
1573 NC_002945.4 926663 . N . . . . GT ./.
|
|
|
1574 NC_002945.4 926664 . N . . . . GT ./.
|
|
|
1575 NC_002945.4 926665 . N . . . . GT ./.
|
|
|
1576 NC_002945.4 926666 . N . . . . GT ./.
|
|
|
1577 NC_002945.4 926667 . N . . . . GT ./.
|
|
|
1578 NC_002945.4 926668 . N . . . . GT ./.
|
|
|
1579 NC_002945.4 926669 . N . . . . GT ./.
|
|
|
1580 NC_002945.4 926670 . N . . . . GT ./.
|
|
|
1581 NC_002945.4 926671 . N . . . . GT ./.
|
|
|
1582 NC_002945.4 926672 . N . . . . GT ./.
|
|
|
1583 NC_002945.4 926673 . N . . . . GT ./.
|
|
|
1584 NC_002945.4 926674 . N . . . . GT ./.
|
|
|
1585 NC_002945.4 926675 . N . . . . GT ./.
|
|
|
1586 NC_002945.4 926676 . N . . . . GT ./.
|
|
|
1587 NC_002945.4 926677 . N . . . . GT ./.
|
|
|
1588 NC_002945.4 926678 . N . . . . GT ./.
|
|
|
1589 NC_002945.4 926679 . N . . . . GT ./.
|
|
|
1590 NC_002945.4 926680 . N . . . . GT ./.
|
|
|
1591 NC_002945.4 926681 . N . . . . GT ./.
|
|
|
1592 NC_002945.4 926682 . N . . . . GT ./.
|
|
|
1593 NC_002945.4 926683 . N . . . . GT ./.
|
|
|
1594 NC_002945.4 926684 . N . . . . GT ./.
|
|
|
1595 NC_002945.4 926685 . N . . . . GT ./.
|
|
|
1596 NC_002945.4 926686 . N . . . . GT ./.
|
|
|
1597 NC_002945.4 926687 . N . . . . GT ./.
|
|
|
1598 NC_002945.4 926688 . N . . . . GT ./.
|
|
|
1599 NC_002945.4 926689 . N . . . . GT ./.
|
|
|
1600 NC_002945.4 926690 . N . . . . GT ./.
|
|
|
1601 NC_002945.4 926691 . N . . . . GT ./.
|
|
|
1602 NC_002945.4 926692 . N . . . . GT ./.
|
|
|
1603 NC_002945.4 926693 . N . . . . GT ./.
|
|
|
1604 NC_002945.4 926694 . N . . . . GT ./.
|
|
|
1605 NC_002945.4 926695 . N . . . . GT ./.
|
|
|
1606 NC_002945.4 926696 . N . . . . GT ./.
|
|
|
1607 NC_002945.4 926697 . N . . . . GT ./.
|
|
|
1608 NC_002945.4 926698 . N . . . . GT ./.
|
|
|
1609 NC_002945.4 926699 . N . . . . GT ./.
|
|
|
1610 NC_002945.4 926700 . N . . . . GT ./.
|
|
|
1611 NC_002945.4 926701 . N . . . . GT ./.
|
|
|
1612 NC_002945.4 926702 . N . . . . GT ./.
|
|
|
1613 NC_002945.4 926703 . N . . . . GT ./.
|
|
|
1614 NC_002945.4 926704 . N . . . . GT ./.
|
|
|
1615 NC_002945.4 926705 . N . . . . GT ./.
|
|
|
1616 NC_002945.4 926706 . N . . . . GT ./.
|
|
|
1617 NC_002945.4 926707 . N . . . . GT ./.
|
|
|
1618 NC_002945.4 926708 . N . . . . GT ./.
|
|
|
1619 NC_002945.4 926709 . N . . . . GT ./.
|
|
|
1620 NC_002945.4 926710 . N . . . . GT ./.
|
|
|
1621 NC_002945.4 926711 . N . . . . GT ./.
|
|
|
1622 NC_002945.4 926712 . N . . . . GT ./.
|
|
|
1623 NC_002945.4 926713 . N . . . . GT ./.
|
|
|
1624 NC_002945.4 926714 . N . . . . GT ./.
|
|
|
1625 NC_002945.4 926715 . N . . . . GT ./.
|
|
|
1626 NC_002945.4 926716 . N . . . . GT ./.
|
|
|
1627 NC_002945.4 926717 . N . . . . GT ./.
|
|
|
1628 NC_002945.4 926718 . N . . . . GT ./.
|
|
|
1629 NC_002945.4 926719 . N . . . . GT ./.
|
|
|
1630 NC_002945.4 926720 . N . . . . GT ./.
|
|
|
1631 NC_002945.4 926721 . N . . . . GT ./.
|
|
|
1632 NC_002945.4 926722 . N . . . . GT ./.
|
|
|
1633 NC_002945.4 926723 . N . . . . GT ./.
|
|
|
1634 NC_002945.4 926724 . N . . . . GT ./.
|
|
|
1635 NC_002945.4 926725 . N . . . . GT ./.
|
|
|
1636 NC_002945.4 926726 . N . . . . GT ./.
|
|
|
1637 NC_002945.4 926727 . N . . . . GT ./.
|
|
|
1638 NC_002945.4 926728 . N . . . . GT ./.
|
|
|
1639 NC_002945.4 926729 . N . . . . GT ./.
|
|
|
1640 NC_002945.4 926730 . N . . . . GT ./.
|
|
|
1641 NC_002945.4 926731 . N . . . . GT ./.
|
|
|
1642 NC_002945.4 926732 . N . . . . GT ./.
|
|
|
1643 NC_002945.4 926772 . N . . . . GT ./.
|
|
|
1644 NC_002945.4 926773 . N . . . . GT ./.
|
|
|
1645 NC_002945.4 926774 . N . . . . GT ./.
|
|
|
1646 NC_002945.4 926775 . N . . . . GT ./.
|
|
|
1647 NC_002945.4 926776 . N . . . . GT ./.
|
|
|
1648 NC_002945.4 926777 . N . . . . GT ./.
|
|
|
1649 NC_002945.4 926778 . N . . . . GT ./.
|
|
|
1650 NC_002945.4 926779 . N . . . . GT ./.
|
|
|
1651 NC_002945.4 926780 . N . . . . GT ./.
|
|
|
1652 NC_002945.4 926781 . N . . . . GT ./.
|
|
|
1653 NC_002945.4 926782 . N . . . . GT ./.
|
|
|
1654 NC_002945.4 926783 . N . . . . GT ./.
|
|
|
1655 NC_002945.4 926784 . N . . . . GT ./.
|
|
|
1656 NC_002945.4 926785 . N . . . . GT ./.
|
|
|
1657 NC_002945.4 926786 . N . . . . GT ./.
|
|
|
1658 NC_002945.4 926787 . N . . . . GT ./.
|
|
|
1659 NC_002945.4 926788 . N . . . . GT ./.
|
|
|
1660 NC_002945.4 926789 . N . . . . GT ./.
|
|
|
1661 NC_002945.4 926790 . N . . . . GT ./.
|
|
|
1662 NC_002945.4 926791 . N . . . . GT ./.
|
|
|
1663 NC_002945.4 926792 . N . . . . GT ./.
|
|
|
1664 NC_002945.4 926793 . N . . . . GT ./.
|
|
|
1665 NC_002945.4 926794 . N . . . . GT ./.
|
|
|
1666 NC_002945.4 926795 . N . . . . GT ./.
|
|
|
1667 NC_002945.4 926796 . N . . . . GT ./.
|
|
|
1668 NC_002945.4 926797 . N . . . . GT ./.
|
|
|
1669 NC_002945.4 926798 . N . . . . GT ./.
|
|
|
1670 NC_002945.4 926799 . N . . . . GT ./.
|
|
|
1671 NC_002945.4 926800 . N . . . . GT ./.
|
|
|
1672 NC_002945.4 926801 . N . . . . GT ./.
|
|
|
1673 NC_002945.4 926802 . N . . . . GT ./.
|
|
|
1674 NC_002945.4 926803 . N . . . . GT ./.
|
|
|
1675 NC_002945.4 926804 . N . . . . GT ./.
|
|
|
1676 NC_002945.4 926805 . N . . . . GT ./.
|
|
|
1677 NC_002945.4 926806 . N . . . . GT ./.
|
|
|
1678 NC_002945.4 926807 . N . . . . GT ./.
|
|
|
1679 NC_002945.4 926808 . N . . . . GT ./.
|
|
|
1680 NC_002945.4 926809 . N . . . . GT ./.
|
|
|
1681 NC_002945.4 926810 . N . . . . GT ./.
|
|
|
1682 NC_002945.4 926811 . N . . . . GT ./.
|
|
|
1683 NC_002945.4 926812 . N . . . . GT ./.
|
|
|
1684 NC_002945.4 926813 . N . . . . GT ./.
|
|
|
1685 NC_002945.4 926814 . N . . . . GT ./.
|
|
|
1686 NC_002945.4 926815 . N . . . . GT ./.
|
|
|
1687 NC_002945.4 926816 . N . . . . GT ./.
|
|
|
1688 NC_002945.4 926817 . N . . . . GT ./.
|
|
|
1689 NC_002945.4 926818 . N . . . . GT ./.
|
|
|
1690 NC_002945.4 926819 . N . . . . GT ./.
|
|
|
1691 NC_002945.4 926820 . N . . . . GT ./.
|
|
|
1692 NC_002945.4 926821 . N . . . . GT ./.
|
|
|
1693 NC_002945.4 926822 . N . . . . GT ./.
|
|
|
1694 NC_002945.4 926823 . N . . . . GT ./.
|
|
|
1695 NC_002945.4 926824 . N . . . . GT ./.
|
|
|
1696 NC_002945.4 926825 . N . . . . GT ./.
|
|
|
1697 NC_002945.4 926826 . N . . . . GT ./.
|
|
|
1698 NC_002945.4 926827 . N . . . . GT ./.
|
|
|
1699 NC_002945.4 926828 . N . . . . GT ./.
|
|
|
1700 NC_002945.4 926829 . N . . . . GT ./.
|
|
|
1701 NC_002945.4 926830 . N . . . . GT ./.
|
|
|
1702 NC_002945.4 926831 . N . . . . GT ./.
|
|
|
1703 NC_002945.4 926832 . N . . . . GT ./.
|
|
|
1704 NC_002945.4 926833 . N . . . . GT ./.
|
|
|
1705 NC_002945.4 926834 . N . . . . GT ./.
|
|
|
1706 NC_002945.4 926835 . N . . . . GT ./.
|
|
|
1707 NC_002945.4 926836 . N . . . . GT ./.
|
|
|
1708 NC_002945.4 926837 . N . . . . GT ./.
|
|
|
1709 NC_002945.4 926838 . N . . . . GT ./.
|
|
|
1710 NC_002945.4 926839 . N . . . . GT ./.
|
|
|
1711 NC_002945.4 926840 . N . . . . GT ./.
|
|
|
1712 NC_002945.4 926841 . N . . . . GT ./.
|
|
|
1713 NC_002945.4 926842 . N . . . . GT ./.
|
|
|
1714 NC_002945.4 926843 . N . . . . GT ./.
|
|
|
1715 NC_002945.4 926844 . N . . . . GT ./.
|
|
|
1716 NC_002945.4 926845 . N . . . . GT ./.
|
|
|
1717 NC_002945.4 926846 . N . . . . GT ./.
|
|
|
1718 NC_002945.4 926847 . N . . . . GT ./.
|
|
|
1719 NC_002945.4 926848 . N . . . . GT ./.
|
|
|
1720 NC_002945.4 926849 . N . . . . GT ./.
|
|
|
1721 NC_002945.4 926850 . N . . . . GT ./.
|
|
|
1722 NC_002945.4 926851 . N . . . . GT ./.
|
|
|
1723 NC_002945.4 926852 . N . . . . GT ./.
|
|
|
1724 NC_002945.4 926853 . N . . . . GT ./.
|
|
|
1725 NC_002945.4 926854 . N . . . . GT ./.
|
|
|
1726 NC_002945.4 926855 . N . . . . GT ./.
|
|
|
1727 NC_002945.4 926856 . N . . . . GT ./.
|
|
|
1728 NC_002945.4 926857 . N . . . . GT ./.
|
|
|
1729 NC_002945.4 926858 . N . . . . GT ./.
|
|
|
1730 NC_002945.4 926859 . N . . . . GT ./.
|
|
|
1731 NC_002945.4 926860 . N . . . . GT ./.
|
|
|
1732 NC_002945.4 926861 . N . . . . GT ./.
|
|
|
1733 NC_002945.4 926862 . N . . . . GT ./.
|
|
|
1734 NC_002945.4 926863 . N . . . . GT ./.
|
|
|
1735 NC_002945.4 926864 . N . . . . GT ./.
|
|
|
1736 NC_002945.4 926865 . N . . . . GT ./.
|
|
|
1737 NC_002945.4 926866 . N . . . . GT ./.
|
|
|
1738 NC_002945.4 926867 . N . . . . GT ./.
|
|
|
1739 NC_002945.4 926868 . N . . . . GT ./.
|
|
|
1740 NC_002945.4 927469 . N . . . . GT ./.
|
|
|
1741 NC_002945.4 927470 . N . . . . GT ./.
|
|
|
1742 NC_002945.4 927471 . N . . . . GT ./.
|
|
|
1743 NC_002945.4 927472 . N . . . . GT ./.
|
|
|
1744 NC_002945.4 927473 . N . . . . GT ./.
|
|
|
1745 NC_002945.4 927474 . N . . . . GT ./.
|
|
|
1746 NC_002945.4 927475 . N . . . . GT ./.
|
|
|
1747 NC_002945.4 927476 . N . . . . GT ./.
|
|
|
1748 NC_002945.4 927477 . N . . . . GT ./.
|
|
|
1749 NC_002945.4 927478 . N . . . . GT ./.
|
|
|
1750 NC_002945.4 927479 . N . . . . GT ./.
|
|
|
1751 NC_002945.4 927480 . N . . . . GT ./.
|
|
|
1752 NC_002945.4 927481 . N . . . . GT ./.
|
|
|
1753 NC_002945.4 927482 . N . . . . GT ./.
|
|
|
1754 NC_002945.4 927483 . N . . . . GT ./.
|
|
|
1755 NC_002945.4 927484 . N . . . . GT ./.
|
|
|
1756 NC_002945.4 927485 . N . . . . GT ./.
|
|
|
1757 NC_002945.4 927486 . N . . . . GT ./.
|
|
|
1758 NC_002945.4 927487 . N . . . . GT ./.
|
|
|
1759 NC_002945.4 927488 . N . . . . GT ./.
|
|
|
1760 NC_002945.4 927489 . N . . . . GT ./.
|
|
|
1761 NC_002945.4 927490 . N . . . . GT ./.
|
|
|
1762 NC_002945.4 927491 . N . . . . GT ./.
|
|
|
1763 NC_002945.4 927492 . N . . . . GT ./.
|
|
|
1764 NC_002945.4 927493 . N . . . . GT ./.
|
|
|
1765 NC_002945.4 927494 . N . . . . GT ./.
|
|
|
1766 NC_002945.4 927495 . N . . . . GT ./.
|
|
|
1767 NC_002945.4 927496 . N . . . . GT ./.
|
|
|
1768 NC_002945.4 927497 . N . . . . GT ./.
|
|
|
1769 NC_002945.4 927498 . N . . . . GT ./.
|
|
|
1770 NC_002945.4 927499 . N . . . . GT ./.
|
|
|
1771 NC_002945.4 927500 . N . . . . GT ./.
|
|
|
1772 NC_002945.4 927501 . N . . . . GT ./.
|
|
|
1773 NC_002945.4 927502 . N . . . . GT ./.
|
|
|
1774 NC_002945.4 927503 . N . . . . GT ./.
|
|
|
1775 NC_002945.4 927504 . N . . . . GT ./.
|
|
|
1776 NC_002945.4 927505 . N . . . . GT ./.
|
|
|
1777 NC_002945.4 927506 . N . . . . GT ./.
|
|
|
1778 NC_002945.4 927507 . N . . . . GT ./.
|
|
|
1779 NC_002945.4 927508 . N . . . . GT ./.
|
|
|
1780 NC_002945.4 927509 . N . . . . GT ./.
|
|
|
1781 NC_002945.4 927510 . N . . . . GT ./.
|
|
|
1782 NC_002945.4 927511 . N . . . . GT ./.
|
|
|
1783 NC_002945.4 927512 . N . . . . GT ./.
|
|
|
1784 NC_002945.4 927513 . N . . . . GT ./.
|
|
|
1785 NC_002945.4 927514 . N . . . . GT ./.
|
|
|
1786 NC_002945.4 927515 . N . . . . GT ./.
|
|
|
1787 NC_002945.4 927516 . N . . . . GT ./.
|
|
|
1788 NC_002945.4 927639 . N . . . . GT ./.
|
|
|
1789 NC_002945.4 927640 . N . . . . GT ./.
|
|
|
1790 NC_002945.4 927641 . N . . . . GT ./.
|
|
|
1791 NC_002945.4 927642 . N . . . . GT ./.
|
|
|
1792 NC_002945.4 927643 . N . . . . GT ./.
|
|
|
1793 NC_002945.4 927644 . N . . . . GT ./.
|
|
|
1794 NC_002945.4 927645 . N . . . . GT ./.
|
|
|
1795 NC_002945.4 927646 . N . . . . GT ./.
|
|
|
1796 NC_002945.4 927647 . N . . . . GT ./.
|
|
|
1797 NC_002945.4 927648 . N . . . . GT ./.
|
|
|
1798 NC_002945.4 927649 . N . . . . GT ./.
|
|
|
1799 NC_002945.4 927650 . N . . . . GT ./.
|
|
|
1800 NC_002945.4 927651 . N . . . . GT ./.
|
|
|
1801 NC_002945.4 927652 . N . . . . GT ./.
|
|
|
1802 NC_002945.4 927653 . N . . . . GT ./.
|
|
|
1803 NC_002945.4 927654 . N . . . . GT ./.
|
|
|
1804 NC_002945.4 927655 . N . . . . GT ./.
|
|
|
1805 NC_002945.4 927656 . N . . . . GT ./.
|
|
|
1806 NC_002945.4 927657 . N . . . . GT ./.
|
|
|
1807 NC_002945.4 927658 . N . . . . GT ./.
|
|
|
1808 NC_002945.4 927659 . N . . . . GT ./.
|
|
|
1809 NC_002945.4 927660 . N . . . . GT ./.
|
|
|
1810 NC_002945.4 927661 . N . . . . GT ./.
|
|
|
1811 NC_002945.4 927662 . N . . . . GT ./.
|
|
|
1812 NC_002945.4 927663 . N . . . . GT ./.
|
|
|
1813 NC_002945.4 927664 . N . . . . GT ./.
|
|
|
1814 NC_002945.4 927665 . N . . . . GT ./.
|
|
|
1815 NC_002945.4 927666 . N . . . . GT ./.
|
|
|
1816 NC_002945.4 927667 . N . . . . GT ./.
|
|
|
1817 NC_002945.4 927668 . N . . . . GT ./.
|
|
|
1818 NC_002945.4 927669 . N . . . . GT ./.
|
|
|
1819 NC_002945.4 927670 . N . . . . GT ./.
|
|
|
1820 NC_002945.4 927671 . N . . . . GT ./.
|
|
|
1821 NC_002945.4 927672 . N . . . . GT ./.
|
|
|
1822 NC_002945.4 927673 . N . . . . GT ./.
|
|
|
1823 NC_002945.4 927674 . N . . . . GT ./.
|
|
|
1824 NC_002945.4 927675 . N . . . . GT ./.
|
|
|
1825 NC_002945.4 927676 . N . . . . GT ./.
|
|
|
1826 NC_002945.4 927677 . N . . . . GT ./.
|
|
|
1827 NC_002945.4 927678 . N . . . . GT ./.
|
|
|
1828 NC_002945.4 927679 . N . . . . GT ./.
|
|
|
1829 NC_002945.4 927680 . N . . . . GT ./.
|
|
|
1830 NC_002945.4 927681 . N . . . . GT ./.
|
|
|
1831 NC_002945.4 927682 . N . . . . GT ./.
|
|
|
1832 NC_002945.4 927683 . N . . . . GT ./.
|
|
|
1833 NC_002945.4 927684 . N . . . . GT ./.
|
|
|
1834 NC_002945.4 927685 . N . . . . GT ./.
|
|
|
1835 NC_002945.4 927686 . N . . . . GT ./.
|
|
|
1836 NC_002945.4 927687 . N . . . . GT ./.
|
|
|
1837 NC_002945.4 927688 . N . . . . GT ./.
|
|
|
1838 NC_002945.4 927689 . N . . . . GT ./.
|
|
|
1839 NC_002945.4 927690 . N . . . . GT ./.
|
|
|
1840 NC_002945.4 927691 . N . . . . GT ./.
|
|
|
1841 NC_002945.4 927692 . N . . . . GT ./.
|
|
|
1842 NC_002945.4 927693 . N . . . . GT ./.
|
|
|
1843 NC_002945.4 927694 . N . . . . GT ./.
|
|
|
1844 NC_002945.4 927695 . N . . . . GT ./.
|
|
|
1845 NC_002945.4 927696 . N . . . . GT ./.
|
|
|
1846 NC_002945.4 927697 . N . . . . GT ./.
|
|
|
1847 NC_002945.4 927698 . N . . . . GT ./.
|
|
|
1848 NC_002945.4 927699 . N . . . . GT ./.
|
|
|
1849 NC_002945.4 927700 . N . . . . GT ./.
|
|
|
1850 NC_002945.4 927701 . N . . . . GT ./.
|
|
|
1851 NC_002945.4 927702 . N . . . . GT ./.
|
|
|
1852 NC_002945.4 927703 . N . . . . GT ./.
|
|
|
1853 NC_002945.4 927704 . N . . . . GT ./.
|
|
|
1854 NC_002945.4 927705 . N . . . . GT ./.
|
|
|
1855 NC_002945.4 927706 . N . . . . GT ./.
|
|
|
1856 NC_002945.4 927707 . N . . . . GT ./.
|
|
|
1857 NC_002945.4 927708 . N . . . . GT ./.
|
|
|
1858 NC_002945.4 927709 . N . . . . GT ./.
|
|
|
1859 NC_002945.4 927710 . N . . . . GT ./.
|
|
|
1860 NC_002945.4 927711 . N . . . . GT ./.
|
|
|
1861 NC_002945.4 927712 . N . . . . GT ./.
|
|
|
1862 NC_002945.4 927713 . N . . . . GT ./.
|
|
|
1863 NC_002945.4 927714 . N . . . . GT ./.
|
|
|
1864 NC_002945.4 927715 . N . . . . GT ./.
|
|
|
1865 NC_002945.4 927716 . N . . . . GT ./.
|
|
|
1866 NC_002945.4 927717 . N . . . . GT ./.
|
|
|
1867 NC_002945.4 927718 . N . . . . GT ./.
|
|
|
1868 NC_002945.4 927719 . N . . . . GT ./.
|
|
|
1869 NC_002945.4 927720 . N . . . . GT ./.
|
|
|
1870 NC_002945.4 927721 . N . . . . GT ./.
|
|
|
1871 NC_002945.4 927722 . N . . . . GT ./.
|
|
|
1872 NC_002945.4 927723 . N . . . . GT ./.
|
|
|
1873 NC_002945.4 927724 . N . . . . GT ./.
|
|
|
1874 NC_002945.4 927725 . N . . . . GT ./.
|
|
|
1875 NC_002945.4 927726 . N . . . . GT ./.
|
|
|
1876 NC_002945.4 927727 . N . . . . GT ./.
|
|
|
1877 NC_002945.4 927728 . N . . . . GT ./.
|
|
|
1878 NC_002945.4 927729 . N . . . . GT ./.
|
|
|
1879 NC_002945.4 927730 . N . . . . GT ./.
|
|
|
1880 NC_002945.4 927731 . N . . . . GT ./.
|
|
|
1881 NC_002945.4 927732 . N . . . . GT ./.
|
|
|
1882 NC_002945.4 927733 . N . . . . GT ./.
|
|
|
1883 NC_002945.4 927734 . N . . . . GT ./.
|
|
|
1884 NC_002945.4 927735 . N . . . . GT ./.
|
|
|
1885 NC_002945.4 927736 . N . . . . GT ./.
|
|
|
1886 NC_002945.4 927737 . N . . . . GT ./.
|
|
|
1887 NC_002945.4 927738 . N . . . . GT ./.
|
|
|
1888 NC_002945.4 927739 . N . . . . GT ./.
|
|
|
1889 NC_002945.4 927740 . N . . . . GT ./.
|
|
|
1890 NC_002945.4 927741 . N . . . . GT ./.
|
|
|
1891 NC_002945.4 927742 . N . . . . GT ./.
|
|
|
1892 NC_002945.4 927743 . N . . . . GT ./.
|
|
|
1893 NC_002945.4 927744 . N . . . . GT ./.
|
|
|
1894 NC_002945.4 927745 . N . . . . GT ./.
|
|
|
1895 NC_002945.4 927746 . N . . . . GT ./.
|
|
|
1896 NC_002945.4 927747 . N . . . . GT ./.
|
|
|
1897 NC_002945.4 927748 . N . . . . GT ./.
|
|
|
1898 NC_002945.4 927749 . N . . . . GT ./.
|
|
|
1899 NC_002945.4 927750 . N . . . . GT ./.
|
|
|
1900 NC_002945.4 927751 . N . . . . GT ./.
|
|
|
1901 NC_002945.4 927752 . N . . . . GT ./.
|
|
|
1902 NC_002945.4 927753 . N . . . . GT ./.
|
|
|
1903 NC_002945.4 927754 . N . . . . GT ./.
|
|
|
1904 NC_002945.4 927755 . N . . . . GT ./.
|
|
|
1905 NC_002945.4 927756 . N . . . . GT ./.
|
|
|
1906 NC_002945.4 927757 . N . . . . GT ./.
|
|
|
1907 NC_002945.4 927758 . N . . . . GT ./.
|
|
|
1908 NC_002945.4 927759 . N . . . . GT ./.
|
|
|
1909 NC_002945.4 927760 . N . . . . GT ./.
|
|
|
1910 NC_002945.4 927761 . N . . . . GT ./.
|
|
|
1911 NC_002945.4 927762 . N . . . . GT ./.
|
|
|
1912 NC_002945.4 927763 . N . . . . GT ./.
|
|
|
1913 NC_002945.4 927764 . N . . . . GT ./.
|
|
|
1914 NC_002945.4 927765 . N . . . . GT ./.
|
|
|
1915 NC_002945.4 927766 . N . . . . GT ./.
|
|
|
1916 NC_002945.4 927767 . N . . . . GT ./.
|
|
|
1917 NC_002945.4 927768 . N . . . . GT ./.
|
|
|
1918 NC_002945.4 927769 . N . . . . GT ./.
|
|
|
1919 NC_002945.4 927770 . N . . . . GT ./.
|
|
|
1920 NC_002945.4 927771 . N . . . . GT ./.
|
|
|
1921 NC_002945.4 927772 . N . . . . GT ./.
|
|
|
1922 NC_002945.4 927773 . N . . . . GT ./.
|
|
|
1923 NC_002945.4 927774 . N . . . . GT ./.
|
|
|
1924 NC_002945.4 927775 . N . . . . GT ./.
|
|
|
1925 NC_002945.4 927776 . N . . . . GT ./.
|
|
|
1926 NC_002945.4 927777 . N . . . . GT ./.
|
|
|
1927 NC_002945.4 927778 . N . . . . GT ./.
|
|
|
1928 NC_002945.4 927779 . N . . . . GT ./.
|
|
|
1929 NC_002945.4 927780 . N . . . . GT ./.
|
|
|
1930 NC_002945.4 927781 . N . . . . GT ./.
|
|
|
1931 NC_002945.4 927782 . N . . . . GT ./.
|
|
|
1932 NC_002945.4 927783 . N . . . . GT ./.
|
|
|
1933 NC_002945.4 927784 . N . . . . GT ./.
|
|
|
1934 NC_002945.4 927785 . N . . . . GT ./.
|
|
|
1935 NC_002945.4 927786 . N . . . . GT ./.
|
|
|
1936 NC_002945.4 927787 . N . . . . GT ./.
|
|
|
1937 NC_002945.4 927788 . N . . . . GT ./.
|
|
|
1938 NC_002945.4 927789 . N . . . . GT ./.
|
|
|
1939 NC_002945.4 927790 . N . . . . GT ./.
|
|
|
1940 NC_002945.4 927791 . N . . . . GT ./.
|
|
|
1941 NC_002945.4 927792 . N . . . . GT ./.
|
|
|
1942 NC_002945.4 927793 . N . . . . GT ./.
|
|
|
1943 NC_002945.4 927794 . N . . . . GT ./.
|
|
|
1944 NC_002945.4 927795 . N . . . . GT ./.
|
|
|
1945 NC_002945.4 927796 . N . . . . GT ./.
|
|
|
1946 NC_002945.4 927797 . N . . . . GT ./.
|
|
|
1947 NC_002945.4 927798 . N . . . . GT ./.
|
|
|
1948 NC_002945.4 927799 . N . . . . GT ./.
|
|
|
1949 NC_002945.4 927800 . N . . . . GT ./.
|
|
|
1950 NC_002945.4 927801 . N . . . . GT ./.
|
|
|
1951 NC_002945.4 927802 . N . . . . GT ./.
|
|
|
1952 NC_002945.4 927803 . N . . . . GT ./.
|
|
|
1953 NC_002945.4 927804 . N . . . . GT ./.
|
|
|
1954 NC_002945.4 927805 . N . . . . GT ./.
|
|
|
1955 NC_002945.4 927806 . N . . . . GT ./.
|
|
|
1956 NC_002945.4 927807 . N . . . . GT ./.
|
|
|
1957 NC_002945.4 927808 . N . . . . GT ./.
|
|
|
1958 NC_002945.4 927809 . N . . . . GT ./.
|
|
|
1959 NC_002945.4 927810 . N . . . . GT ./.
|
|
|
1960 NC_002945.4 927811 . N . . . . GT ./.
|
|
|
1961 NC_002945.4 927812 . N . . . . GT ./.
|
|
|
1962 NC_002945.4 927813 . N . . . . GT ./.
|
|
|
1963 NC_002945.4 927814 . N . . . . GT ./.
|
|
|
1964 NC_002945.4 927815 . N . . . . GT ./.
|
|
|
1965 NC_002945.4 927816 . N . . . . GT ./.
|
|
|
1966 NC_002945.4 927817 . N . . . . GT ./.
|
|
|
1967 NC_002945.4 927818 . N . . . . GT ./.
|
|
|
1968 NC_002945.4 927819 . N . . . . GT ./.
|
|
|
1969 NC_002945.4 927820 . N . . . . GT ./.
|
|
|
1970 NC_002945.4 927821 . N . . . . GT ./.
|
|
|
1971 NC_002945.4 927822 . N . . . . GT ./.
|
|
|
1972 NC_002945.4 927823 . N . . . . GT ./.
|
|
|
1973 NC_002945.4 927824 . N . . . . GT ./.
|
|
|
1974 NC_002945.4 927825 . N . . . . GT ./.
|
|
|
1975 NC_002945.4 927826 . N . . . . GT ./.
|
|
|
1976 NC_002945.4 927827 . N . . . . GT ./.
|
|
|
1977 NC_002945.4 927828 . N . . . . GT ./.
|
|
|
1978 NC_002945.4 927829 . N . . . . GT ./.
|
|
|
1979 NC_002945.4 927830 . N . . . . GT ./.
|
|
|
1980 NC_002945.4 927831 . N . . . . GT ./.
|
|
|
1981 NC_002945.4 927832 . N . . . . GT ./.
|
|
|
1982 NC_002945.4 927833 . N . . . . GT ./.
|
|
|
1983 NC_002945.4 927834 . N . . . . GT ./.
|
|
|
1984 NC_002945.4 927835 . N . . . . GT ./.
|
|
|
1985 NC_002945.4 927836 . N . . . . GT ./.
|
|
|
1986 NC_002945.4 927837 . N . . . . GT ./.
|
|
|
1987 NC_002945.4 927838 . N . . . . GT ./.
|
|
|
1988 NC_002945.4 927839 . N . . . . GT ./.
|
|
|
1989 NC_002945.4 927840 . N . . . . GT ./.
|
|
|
1990 NC_002945.4 927841 . N . . . . GT ./.
|
|
|
1991 NC_002945.4 927842 . N . . . . GT ./.
|
|
|
1992 NC_002945.4 927843 . N . . . . GT ./.
|
|
|
1993 NC_002945.4 927844 . N . . . . GT ./.
|
|
|
1994 NC_002945.4 927845 . N . . . . GT ./.
|
|
|
1995 NC_002945.4 927846 . N . . . . GT ./.
|
|
|
1996 NC_002945.4 927847 . N . . . . GT ./.
|
|
|
1997 NC_002945.4 927848 . N . . . . GT ./.
|
|
|
1998 NC_002945.4 927849 . N . . . . GT ./.
|
|
|
1999 NC_002945.4 927850 . N . . . . GT ./.
|
|
|
2000 NC_002945.4 927851 . N . . . . GT ./.
|
|
|
2001 NC_002945.4 927852 . N . . . . GT ./.
|
|
|
2002 NC_002945.4 927853 . N . . . . GT ./.
|
|
|
2003 NC_002945.4 927854 . N . . . . GT ./.
|
|
|
2004 NC_002945.4 927855 . N . . . . GT ./.
|
|
|
2005 NC_002945.4 927856 . N . . . . GT ./.
|
|
|
2006 NC_002945.4 927857 . N . . . . GT ./.
|
|
|
2007 NC_002945.4 927858 . N . . . . GT ./.
|
|
|
2008 NC_002945.4 927859 . N . . . . GT ./.
|
|
|
2009 NC_002945.4 927860 . N . . . . GT ./.
|
|
|
2010 NC_002945.4 927861 . N . . . . GT ./.
|
|
|
2011 NC_002945.4 927862 . N . . . . GT ./.
|
|
|
2012 NC_002945.4 927863 . N . . . . GT ./.
|
|
|
2013 NC_002945.4 927864 . N . . . . GT ./.
|
|
|
2014 NC_002945.4 927865 . N . . . . GT ./.
|
|
|
2015 NC_002945.4 927866 . N . . . . GT ./.
|
|
|
2016 NC_002945.4 927867 . N . . . . GT ./.
|
|
|
2017 NC_002945.4 927868 . N . . . . GT ./.
|
|
|
2018 NC_002945.4 927869 . N . . . . GT ./.
|
|
|
2019 NC_002945.4 927870 . N . . . . GT ./.
|
|
|
2020 NC_002945.4 927871 . N . . . . GT ./.
|
|
|
2021 NC_002945.4 927872 . N . . . . GT ./.
|
|
|
2022 NC_002945.4 927873 . N . . . . GT ./.
|
|
|
2023 NC_002945.4 927874 . N . . . . GT ./.
|
|
|
2024 NC_002945.4 927875 . N . . . . GT ./.
|
|
|
2025 NC_002945.4 927876 . N . . . . GT ./.
|
|
|
2026 NC_002945.4 927877 . N . . . . GT ./.
|
|
|
2027 NC_002945.4 927878 . N . . . . GT ./.
|
|
|
2028 NC_002945.4 927879 . N . . . . GT ./.
|
|
|
2029 NC_002945.4 927880 . N . . . . GT ./.
|
|
|
2030 NC_002945.4 927881 . N . . . . GT ./.
|
|
|
2031 NC_002945.4 927882 . N . . . . GT ./.
|
|
|
2032 NC_002945.4 927883 . N . . . . GT ./.
|
|
|
2033 NC_002945.4 927884 . N . . . . GT ./.
|
|
|
2034 NC_002945.4 927885 . N . . . . GT ./.
|
|
|
2035 NC_002945.4 927886 . N . . . . GT ./.
|
|
|
2036 NC_002945.4 927887 . N . . . . GT ./.
|
|
|
2037 NC_002945.4 927888 . N . . . . GT ./.
|
|
|
2038 NC_002945.4 927889 . N . . . . GT ./.
|
|
|
2039 NC_002945.4 927890 . N . . . . GT ./.
|
|
|
2040 NC_002945.4 927891 . N . . . . GT ./.
|
|
|
2041 NC_002945.4 927892 . N . . . . GT ./.
|
|
|
2042 NC_002945.4 927893 . N . . . . GT ./.
|
|
|
2043 NC_002945.4 927894 . N . . . . GT ./.
|
|
|
2044 NC_002945.4 927895 . N . . . . GT ./.
|
|
|
2045 NC_002945.4 927896 . N . . . . GT ./.
|
|
|
2046 NC_002945.4 927897 . N . . . . GT ./.
|
|
|
2047 NC_002945.4 927898 . N . . . . GT ./.
|
|
|
2048 NC_002945.4 927899 . N . . . . GT ./.
|
|
|
2049 NC_002945.4 927900 . N . . . . GT ./.
|
|
|
2050 NC_002945.4 927901 . N . . . . GT ./.
|
|
|
2051 NC_002945.4 927902 . N . . . . GT ./.
|
|
|
2052 NC_002945.4 927903 . N . . . . GT ./.
|
|
|
2053 NC_002945.4 927904 . N . . . . GT ./.
|
|
|
2054 NC_002945.4 927905 . N . . . . GT ./.
|
|
|
2055 NC_002945.4 927906 . N . . . . GT ./.
|
|
|
2056 NC_002945.4 927907 . N . . . . GT ./.
|
|
|
2057 NC_002945.4 927908 . N . . . . GT ./.
|
|
|
2058 NC_002945.4 927909 . N . . . . GT ./.
|
|
|
2059 NC_002945.4 927910 . N . . . . GT ./.
|
|
|
2060 NC_002945.4 927911 . N . . . . GT ./.
|
|
|
2061 NC_002945.4 927912 . N . . . . GT ./.
|
|
|
2062 NC_002945.4 927913 . N . . . . GT ./.
|
|
|
2063 NC_002945.4 927914 . N . . . . GT ./.
|
|
|
2064 NC_002945.4 927915 . N . . . . GT ./.
|
|
|
2065 NC_002945.4 927916 . N . . . . GT ./.
|
|
|
2066 NC_002945.4 927917 . N . . . . GT ./.
|
|
|
2067 NC_002945.4 927918 . N . . . . GT ./.
|
|
|
2068 NC_002945.4 927919 . N . . . . GT ./.
|
|
|
2069 NC_002945.4 927920 . N . . . . GT ./.
|
|
|
2070 NC_002945.4 927921 . N . . . . GT ./.
|
|
|
2071 NC_002945.4 927922 . N . . . . GT ./.
|
|
|
2072 NC_002945.4 927923 . N . . . . GT ./.
|
|
|
2073 NC_002945.4 927924 . N . . . . GT ./.
|
|
|
2074 NC_002945.4 927925 . N . . . . GT ./.
|
|
|
2075 NC_002945.4 927926 . N . . . . GT ./.
|
|
|
2076 NC_002945.4 927927 . N . . . . GT ./.
|
|
|
2077 NC_002945.4 927928 . N . . . . GT ./.
|
|
|
2078 NC_002945.4 927929 . N . . . . GT ./.
|
|
|
2079 NC_002945.4 927930 . N . . . . GT ./.
|
|
|
2080 NC_002945.4 927931 . N . . . . GT ./.
|
|
|
2081 NC_002945.4 927932 . N . . . . GT ./.
|
|
|
2082 NC_002945.4 927933 . N . . . . GT ./.
|
|
|
2083 NC_002945.4 927934 . N . . . . GT ./.
|
|
|
2084 NC_002945.4 927935 . N . . . . GT ./.
|
|
|
2085 NC_002945.4 927936 . N . . . . GT ./.
|
|
|
2086 NC_002945.4 927937 . N . . . . GT ./.
|
|
|
2087 NC_002945.4 927938 . N . . . . GT ./.
|
|
|
2088 NC_002945.4 927939 . N . . . . GT ./.
|
|
|
2089 NC_002945.4 927940 . N . . . . GT ./.
|
|
|
2090 NC_002945.4 927941 . N . . . . GT ./.
|
|
|
2091 NC_002945.4 927942 . N . . . . GT ./.
|
|
|
2092 NC_002945.4 927943 . N . . . . GT ./.
|
|
|
2093 NC_002945.4 927944 . N . . . . GT ./.
|
|
|
2094 NC_002945.4 927945 . N . . . . GT ./.
|
|
|
2095 NC_002945.4 927946 . N . . . . GT ./.
|
|
|
2096 NC_002945.4 927947 . N . . . . GT ./.
|
|
|
2097 NC_002945.4 928976 . G A 1267.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.591;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=27.616;MLEAC=1;MLEAF=0.500;MQ=59.95;MQRankSum=-1.167;QD=7.37;ReadPosRankSum=-9.673;SOR=1.977 GT:AD:DP:GQ:PL 0/1:100,72:172:99:1296,0,2240
|
|
|
2098 NC_002945.4 930632 . N . . . . GT ./.
|
|
|
2099 NC_002945.4 930633 . N . . . . GT ./.
|
|
|
2100 NC_002945.4 930634 . N . . . . GT ./.
|
|
|
2101 NC_002945.4 930635 . N . . . . GT ./.
|
|
|
2102 NC_002945.4 930636 . N . . . . GT ./.
|
|
|
2103 NC_002945.4 930637 . N . . . . GT ./.
|
|
|
2104 NC_002945.4 930638 . N . . . . GT ./.
|
|
|
2105 NC_002945.4 930639 . N . . . . GT ./.
|
|
|
2106 NC_002945.4 941068 . A C 7221.77 . AC=2;AF=1.00;AN=2;DP=231;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.40;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,230:230:99:7250,684,0
|
|
|
2107 NC_002945.4 943719 . G A 7925.77 . AC=2;AF=1.00;AN=2;DP=273;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.03;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,273:273:99:7954,816,0
|
|
|
2108 NC_002945.4 946102 . G T 8348.77 . AC=2;AF=1.00;AN=2;DP=292;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.79;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,290:290:99:8377,862,0
|
|
|
2109 NC_002945.4 967989 . T C 8360.77 . AC=2;AF=1.00;AN=2;DP=265;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.55;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,265:265:99:8389,794,0
|
|
|
2110 NC_002945.4 970109 . N . . . . GT ./.
|
|
|
2111 NC_002945.4 970110 . N . . . . GT ./.
|
|
|
2112 NC_002945.4 970111 . N . . . . GT ./.
|
|
|
2113 NC_002945.4 970112 . N . . . . GT ./.
|
|
|
2114 NC_002945.4 970113 . N . . . . GT ./.
|
|
|
2115 NC_002945.4 970114 . N . . . . GT ./.
|
|
|
2116 NC_002945.4 970115 . N . . . . GT ./.
|
|
|
2117 NC_002945.4 970116 . N . . . . GT ./.
|
|
|
2118 NC_002945.4 970117 . N . . . . GT ./.
|
|
|
2119 NC_002945.4 970118 . N . . . . GT ./.
|
|
|
2120 NC_002945.4 970119 . N . . . . GT ./.
|
|
|
2121 NC_002945.4 970120 . N . . . . GT ./.
|
|
|
2122 NC_002945.4 970121 . N . . . . GT ./.
|
|
|
2123 NC_002945.4 970122 . N . . . . GT ./.
|
|
|
2124 NC_002945.4 970123 . N . . . . GT ./.
|
|
|
2125 NC_002945.4 970124 . N . . . . GT ./.
|
|
|
2126 NC_002945.4 970125 . N . . . . GT ./.
|
|
|
2127 NC_002945.4 970126 . N . . . . GT ./.
|
|
|
2128 NC_002945.4 970127 . N . . . . GT ./.
|
|
|
2129 NC_002945.4 970128 . N . . . . GT ./.
|
|
|
2130 NC_002945.4 970129 . N . . . . GT ./.
|
|
|
2131 NC_002945.4 970130 . N . . . . GT ./.
|
|
|
2132 NC_002945.4 970131 . N . . . . GT ./.
|
|
|
2133 NC_002945.4 970132 . N . . . . GT ./.
|
|
|
2134 NC_002945.4 970133 . N . . . . GT ./.
|
|
|
2135 NC_002945.4 970154 . N . . . . GT ./.
|
|
|
2136 NC_002945.4 970155 . N . . . . GT ./.
|
|
|
2137 NC_002945.4 970156 . N . . . . GT ./.
|
|
|
2138 NC_002945.4 970157 . N . . . . GT ./.
|
|
|
2139 NC_002945.4 970158 . N . . . . GT ./.
|
|
|
2140 NC_002945.4 970159 . N . . . . GT ./.
|
|
|
2141 NC_002945.4 970160 . N . . . . GT ./.
|
|
|
2142 NC_002945.4 970161 . N . . . . GT ./.
|
|
|
2143 NC_002945.4 970162 . N . . . . GT ./.
|
|
|
2144 NC_002945.4 970163 . N . . . . GT ./.
|
|
|
2145 NC_002945.4 970164 . N . . . . GT ./.
|
|
|
2146 NC_002945.4 970165 . N . . . . GT ./.
|
|
|
2147 NC_002945.4 970166 . N . . . . GT ./.
|
|
|
2148 NC_002945.4 970167 . N . . . . GT ./.
|
|
|
2149 NC_002945.4 976327 . C T 5094.77 . AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.33;SOR=1.770 GT:AD:DP:GQ:PL 1/1:0,168:168:99:5123,495,0
|
|
|
2150 NC_002945.4 982007 . G C 5740.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.690;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.14;ReadPosRankSum=-0.449;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,196:197:99:5769,550,0
|
|
|
2151 NC_002945.4 998183 . C G 9423.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.858;ClippingRankSum=0.000;DP=301;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.31;ReadPosRankSum=-0.474;SOR=0.276 GT:AD:DP:GQ:PL 1/1:1,300:301:99:9452,886,0
|
|
|
2152 NC_002945.4 1022365 . T C 8450.77 . AC=2;AF=1.00;AN=2;DP=285;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.65;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,285:285:99:8479,849,0
|
|
|
2153 NC_002945.4 1053067 . T G 9727.77 . AC=2;AF=1.00;AN=2;DP=319;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.49;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,319:319:99:9756,947,0
|
|
|
2154 NC_002945.4 1096802 . T G 4506.77 . AC=2;AF=1.00;AN=2;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.48;QD=30.45;SOR=1.470 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4535,441,0
|
|
|
2155 NC_002945.4 1104019 . T C 10285.77 . AC=2;AF=1.00;AN=2;DP=338;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.43;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,338:338:99:10314,1006,0
|
|
|
2156 NC_002945.4 1124266 . G A 8464.77 . AC=2;AF=1.00;AN=2;DP=273;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.01;SOR=0.745 GT:AD:DP:GQ:PL 1/1:0,273:273:99:8493,815,0
|
|
|
2157 NC_002945.4 1137800 . G C 6583.77 . AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,196:196:99:6612,587,0
|
|
|
2158 NC_002945.4 1139489 . T C 7148.77 . AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.41;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,214:214:99:7177,641,0
|
|
|
2159 NC_002945.4 1139963 . G A 6477.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.006;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.05;ReadPosRankSum=-0.831;SOR=0.720 GT:AD:DP:GQ:PL 1/1:2,221:223:99:6506,612,0
|
|
|
2160 NC_002945.4 1141124 . C T 4355.77 . AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.25;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4384,430,0
|
|
|
2161 NC_002945.4 1144616 . G A 6051.77 . AC=2;AF=1.00;AN=2;DP=193;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.36;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,193:193:99:6080,578,0
|
|
|
2162 NC_002945.4 1168458 . G T 5965.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.837;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=3.076;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.68;ReadPosRankSum=-0.549;SOR=0.287 GT:AD:DP:GQ:PL 1/1:1,200:201:99:5994,586,0
|
|
|
2163 NC_002945.4 1182886 . T C 5607.77 . AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,174:174:99:5636,518,0
|
|
|
2164 NC_002945.4 1184193 . G A 4110.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.490;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=3.508;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=26.18;ReadPosRankSum=2.523;SOR=0.605 GT:AD:DP:GQ:PL 1/1:1,156:157:99:4139,426,0
|
|
|
2165 NC_002945.4 1190101 . G A 351.77 . AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.06;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,13:13:38:380,38,0
|
|
|
2166 NC_002945.4 1190261 . T A 466.77 . AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.57;QD=33.34;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:495,42,0
|
|
|
2167 NC_002945.4 1191323 . C T 3455.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.752;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=34.56;ReadPosRankSum=-0.532;SOR=1.532 GT:AD:DP:GQ:PL 1/1:1,99:100:99:3484,288,0
|
|
|
2168 NC_002945.4 1206896 . A G 7237.77 . AC=2;AF=1.00;AN=2;DP=231;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.33;SOR=0.911 GT:AD:DP:GQ:PL 1/1:0,231:231:99:7266,689,0
|
|
|
2169 NC_002945.4 1214031 . G A 16.86 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.451;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=1.20;ReadPosRankSum=-0.654;SOR=0.148 GT:AD:DP:GQ:PL 0/1:12,2:14:45:45,0,875
|
|
|
2170 NC_002945.4 1214540 . T C 815.77 . AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.13;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,29:29:85:844,85,0
|
|
|
2171 NC_002945.4 1214767 . C T 89.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.858;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=16.442;MLEAC=1;MLEAF=0.500;MQ=59.71;MQRankSum=0.754;QD=1.60;ReadPosRankSum=-6.933;SOR=1.893 GT:AD:DP:GQ:PL 0/1:37,19:56:99:118,0,630
|
|
|
2172 NC_002945.4 1216269 . T C 6862.77 . AC=2;AF=1.00;AN=2;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.81;SOR=0.993 GT:AD:DP:GQ:PL 1/1:0,203:203:99:6891,607,0
|
|
|
2173 NC_002945.4 1218405 . N . . . . GT ./.
|
|
|
2174 NC_002945.4 1218406 . N . . . . GT ./.
|
|
|
2175 NC_002945.4 1218407 . N . . . . GT ./.
|
|
|
2176 NC_002945.4 1218408 . N . . . . GT ./.
|
|
|
2177 NC_002945.4 1218409 . N . . . . GT ./.
|
|
|
2178 NC_002945.4 1218410 . N . . . . GT ./.
|
|
|
2179 NC_002945.4 1218411 . N . . . . GT ./.
|
|
|
2180 NC_002945.4 1218412 . N . . . . GT ./.
|
|
|
2181 NC_002945.4 1218413 . N . . . . GT ./.
|
|
|
2182 NC_002945.4 1218414 . N . . . . GT ./.
|
|
|
2183 NC_002945.4 1218415 . N . . . . GT ./.
|
|
|
2184 NC_002945.4 1218416 . N . . . . GT ./.
|
|
|
2185 NC_002945.4 1219085 . G C 62.74 . AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0
|
|
|
2186 NC_002945.4 1224489 . T C 7178.77 . AC=2;AF=1.00;AN=2;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.94;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,232:232:99:7207,694,0
|
|
|
2187 NC_002945.4 1230875 . G T 6465.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.923;ClippingRankSum=0.000;DP=219;ExcessHet=3.0103;FS=5.159;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.52;ReadPosRankSum=4.830;SOR=0.944 GT:AD:DP:GQ:PL 1/1:4,215:219:99:6494,514,0
|
|
|
2188 NC_002945.4 1272542 . A G 6712.77 . AC=2;AF=1.00;AN=2;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,206:206:99:6741,615,0
|
|
|
2189 NC_002945.4 1278083 . T G 7183.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.148;ClippingRankSum=0.000;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.74;MQRankSum=-0.117;QD=32.80;ReadPosRankSum=-0.542;SOR=1.091 GT:AD:DP:GQ:PL 1/1:2,217:219:99:7212,604,0
|
|
|
2190 NC_002945.4 1278084 . G C 9920.77 . AC=2;AF=1.00;AN=2;DP=218;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.90;QD=28.18;SOR=1.053 GT:AD:DP:GQ:PL 1/1:0,218:218:99:9949,671,0
|
|
|
2191 NC_002945.4 1278089 . G T 10014.77 . AC=2;AF=1.00;AN=2;DP=223;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.25;QD=28.32;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,223:223:99:10043,680,0
|
|
|
2192 NC_002945.4 1285158 . C T 4889.77 . AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.38;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,151:151:99:4918,451,0
|
|
|
2193 NC_002945.4 1295549 . C T 9783.77 . AC=2;AF=1.00;AN=2;DP=331;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.56;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,331:331:99:9812,987,0
|
|
|
2194 NC_002945.4 1301768 . G A 6578.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.880;ClippingRankSum=0.000;DP=218;ExcessHet=3.0103;FS=3.517;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.18;ReadPosRankSum=1.865;SOR=0.605 GT:AD:DP:GQ:PL 1/1:1,217:218:99:6607,640,0
|
|
|
2195 NC_002945.4 1326143 . G A 6866.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.432;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=3.299;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.47;ReadPosRankSum=2.289;SOR=0.448 GT:AD:DP:GQ:PL 1/1:1,232:233:99:6895,661,0
|
|
|
2196 NC_002945.4 1341413 . A C 5904.77 . AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.88;QD=35.03;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,134:134:99:5933,403,0
|
|
|
2197 NC_002945.4 1341414 . G A 5904.77 . AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.84;QD=25.82;SOR=1.016 GT:AD:DP:GQ:PL 1/1:0,133:133:99:5933,403,0
|
|
|
2198 NC_002945.4 1341506 . T C 5731.77 . AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.39;QD=32.17;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,132:132:99:5760,397,0
|
|
|
2199 NC_002945.4 1341507 . C A 5731.77 . AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.39;QD=32.77;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,132:132:99:5760,397,0
|
|
|
2200 NC_002945.4 1343752 . A G 2248.77 . AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=39.94;QD=30.77;SOR=8.189 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2277,176,0
|
|
|
2201 NC_002945.4 1367962 . C G 6384.77 . AC=2;AF=1.00;AN=2;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.33;SOR=1.796 GT:AD:DP:GQ:PL 1/1:0,186:186:99:6413,554,0
|
|
|
2202 NC_002945.4 1404807 . T A 7468.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-1.392;ClippingRankSum=0.000;DP=264;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.29;ReadPosRankSum=-0.331;SOR=0.319 GT:AD:DP:GQ:PL 1/1:1,263:264:99:7497,745,0
|
|
|
2203 NC_002945.4 1417803 . N . . . . GT ./.
|
|
|
2204 NC_002945.4 1417804 . N . . . . GT ./.
|
|
|
2205 NC_002945.4 1417805 . N . . . . GT ./.
|
|
|
2206 NC_002945.4 1417806 . N . . . . GT ./.
|
|
|
2207 NC_002945.4 1417807 . N . . . . GT ./.
|
|
|
2208 NC_002945.4 1417808 . N . . . . GT ./.
|
|
|
2209 NC_002945.4 1417809 . N . . . . GT ./.
|
|
|
2210 NC_002945.4 1417810 . N . . . . GT ./.
|
|
|
2211 NC_002945.4 1417811 . N . . . . GT ./.
|
|
|
2212 NC_002945.4 1421904 . T C 7669.77 . AC=2;AF=1.00;AN=2;DP=233;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.92;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,233:233:99:7698,696,0
|
|
|
2213 NC_002945.4 1442194 . T G 7522.77 . AC=2;AF=1.00;AN=2;DP=225;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=0.875 GT:AD:DP:GQ:PL 1/1:0,225:225:99:7551,673,0
|
|
|
2214 NC_002945.4 1446436 . G A 6946.77 . AC=2;AF=1.00;AN=2;DP=226;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.87;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,225:225:99:6975,672,0
|
|
|
2215 NC_002945.4 1470606 . C T 5956.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.115;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.49;MQRankSum=-0.375;QD=27.71;ReadPosRankSum=-0.174;SOR=0.780 GT:AD:DP:GQ:PL 1/1:2,213:215:99:5985,573,0
|
|
|
2216 NC_002945.4 1477794 . T C 10519.77 . AC=2;AF=1.00;AN=2;DP=338;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.22;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,337:337:99:10548,1006,0
|
|
|
2217 NC_002945.4 1491887 . N . . . . GT ./.
|
|
|
2218 NC_002945.4 1491888 . N . . . . GT ./.
|
|
|
2219 NC_002945.4 1491889 . N . . . . GT ./.
|
|
|
2220 NC_002945.4 1491890 . N . . . . GT ./.
|
|
|
2221 NC_002945.4 1491891 . N . . . . GT ./.
|
|
|
2222 NC_002945.4 1491892 . N . . . . GT ./.
|
|
|
2223 NC_002945.4 1491893 . N . . . . GT ./.
|
|
|
2224 NC_002945.4 1491894 . N . . . . GT ./.
|
|
|
2225 NC_002945.4 1491895 . N . . . . GT ./.
|
|
|
2226 NC_002945.4 1491896 . N . . . . GT ./.
|
|
|
2227 NC_002945.4 1491897 . N . . . . GT ./.
|
|
|
2228 NC_002945.4 1491898 . N . . . . GT ./.
|
|
|
2229 NC_002945.4 1491899 . N . . . . GT ./.
|
|
|
2230 NC_002945.4 1491900 . N . . . . GT ./.
|
|
|
2231 NC_002945.4 1498117 . G A 7891.77 . AC=2;AF=1.00;AN=2;DP=260;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.35;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,260:260:99:7920,775,0
|
|
|
2232 NC_002945.4 1509487 . A G 7399.77 . AC=2;AF=1.00;AN=2;DP=222;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,222:222:99:7428,664,0
|
|
|
2233 NC_002945.4 1529147 . T G 7666.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.706;ClippingRankSum=0.000;DP=252;ExcessHet=3.0103;FS=3.080;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.42;ReadPosRankSum=-0.669;SOR=0.287 GT:AD:DP:GQ:PL 1/1:1,251:252:99:7695,740,0
|
|
|
2234 NC_002945.4 1533175 . A G 9163.77 . AC=2;AF=1.00;AN=2;DP=292;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.38;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,292:292:99:9192,873,0
|
|
|
2235 NC_002945.4 1535271 . A T 5450.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.168;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=2.864;MLEAC=2;MLEAF=1.00;MQ=59.77;MQRankSum=7.783;QD=26.98;ReadPosRankSum=-0.742;SOR=1.258 GT:AD:DP:GQ:PL 1/1:10,192:202:99:5479,356,0
|
|
|
2236 NC_002945.4 1573872 . N . . . . GT ./.
|
|
|
2237 NC_002945.4 1573873 . N . . . . GT ./.
|
|
|
2238 NC_002945.4 1573874 . N . . . . GT ./.
|
|
|
2239 NC_002945.4 1573875 . N . . . . GT ./.
|
|
|
2240 NC_002945.4 1573876 . N . . . . GT ./.
|
|
|
2241 NC_002945.4 1573877 . N . . . . GT ./.
|
|
|
2242 NC_002945.4 1573878 . N . . . . GT ./.
|
|
|
2243 NC_002945.4 1573879 . N . . . . GT ./.
|
|
|
2244 NC_002945.4 1573967 . N . . . . GT ./.
|
|
|
2245 NC_002945.4 1573968 . N . . . . GT ./.
|
|
|
2246 NC_002945.4 1573969 . N . . . . GT ./.
|
|
|
2247 NC_002945.4 1573970 . N . . . . GT ./.
|
|
|
2248 NC_002945.4 1573971 . N . . . . GT ./.
|
|
|
2249 NC_002945.4 1573972 . N . . . . GT ./.
|
|
|
2250 NC_002945.4 1573973 . N . . . . GT ./.
|
|
|
2251 NC_002945.4 1573974 . N . . . . GT ./.
|
|
|
2252 NC_002945.4 1573975 . N . . . . GT ./.
|
|
|
2253 NC_002945.4 1573976 . N . . . . GT ./.
|
|
|
2254 NC_002945.4 1573977 . N . . . . GT ./.
|
|
|
2255 NC_002945.4 1573978 . N . . . . GT ./.
|
|
|
2256 NC_002945.4 1573979 . N . . . . GT ./.
|
|
|
2257 NC_002945.4 1573980 . N . . . . GT ./.
|
|
|
2258 NC_002945.4 1573981 . N . . . . GT ./.
|
|
|
2259 NC_002945.4 1573982 . N . . . . GT ./.
|
|
|
2260 NC_002945.4 1573983 . N . . . . GT ./.
|
|
|
2261 NC_002945.4 1573984 . N . . . . GT ./.
|
|
|
2262 NC_002945.4 1573985 . N . . . . GT ./.
|
|
|
2263 NC_002945.4 1573986 . N . . . . GT ./.
|
|
|
2264 NC_002945.4 1573987 . N . . . . GT ./.
|
|
|
2265 NC_002945.4 1573988 . N . . . . GT ./.
|
|
|
2266 NC_002945.4 1573989 . N . . . . GT ./.
|
|
|
2267 NC_002945.4 1573990 . N . . . . GT ./.
|
|
|
2268 NC_002945.4 1573991 . N . . . . GT ./.
|
|
|
2269 NC_002945.4 1573992 . N . . . . GT ./.
|
|
|
2270 NC_002945.4 1573993 . N . . . . GT ./.
|
|
|
2271 NC_002945.4 1573994 . N . . . . GT ./.
|
|
|
2272 NC_002945.4 1573995 . N . . . . GT ./.
|
|
|
2273 NC_002945.4 1573996 . N . . . . GT ./.
|
|
|
2274 NC_002945.4 1573997 . N . . . . GT ./.
|
|
|
2275 NC_002945.4 1573998 . N . . . . GT ./.
|
|
|
2276 NC_002945.4 1573999 . N . . . . GT ./.
|
|
|
2277 NC_002945.4 1574000 . N . . . . GT ./.
|
|
|
2278 NC_002945.4 1574001 . N . . . . GT ./.
|
|
|
2279 NC_002945.4 1574002 . N . . . . GT ./.
|
|
|
2280 NC_002945.4 1574003 . N . . . . GT ./.
|
|
|
2281 NC_002945.4 1574004 . N . . . . GT ./.
|
|
|
2282 NC_002945.4 1574005 . N . . . . GT ./.
|
|
|
2283 NC_002945.4 1574006 . N . . . . GT ./.
|
|
|
2284 NC_002945.4 1574007 . N . . . . GT ./.
|
|
|
2285 NC_002945.4 1574008 . N . . . . GT ./.
|
|
|
2286 NC_002945.4 1574009 . N . . . . GT ./.
|
|
|
2287 NC_002945.4 1574010 . N . . . . GT ./.
|
|
|
2288 NC_002945.4 1574011 . N . . . . GT ./.
|
|
|
2289 NC_002945.4 1574012 . N . . . . GT ./.
|
|
|
2290 NC_002945.4 1574013 . N . . . . GT ./.
|
|
|
2291 NC_002945.4 1582413 . G C 6133.77 . AC=2;AF=1.00;AN=2;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,189:189:99:6162,564,0
|
|
|
2292 NC_002945.4 1601835 . G A 7578.77 . AC=2;AF=1.00;AN=2;DP=256;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=0.879 GT:AD:DP:GQ:PL 1/1:0,256:256:99:7607,762,0
|
|
|
2293 NC_002945.4 1610248 . C G 6653.77 . AC=2;AF=1.00;AN=2;DP=209;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.84;SOR=0.868 GT:AD:DP:GQ:PL 1/1:0,209:209:99:6682,625,0
|
|
|
2294 NC_002945.4 1619153 . A G 1950.77 . AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.93;SOR=1.262 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1979,164,0
|
|
|
2295 NC_002945.4 1632869 . G T 1991.77 . AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.95;QD=27.66;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2020,212,0
|
|
|
2296 NC_002945.4 1633335 . N . . . . GT ./.
|
|
|
2297 NC_002945.4 1633336 . N . . . . GT ./.
|
|
|
2298 NC_002945.4 1633337 . N . . . . GT ./.
|
|
|
2299 NC_002945.4 1633338 . N . . . . GT ./.
|
|
|
2300 NC_002945.4 1633339 . N . . . . GT ./.
|
|
|
2301 NC_002945.4 1633340 . N . . . . GT ./.
|
|
|
2302 NC_002945.4 1633341 . N . . . . GT ./.
|
|
|
2303 NC_002945.4 1633342 . N . . . . GT ./.
|
|
|
2304 NC_002945.4 1633343 . N . . . . GT ./.
|
|
|
2305 NC_002945.4 1633344 . N . . . . GT ./.
|
|
|
2306 NC_002945.4 1633345 . N . . . . GT ./.
|
|
|
2307 NC_002945.4 1633346 . N . . . . GT ./.
|
|
|
2308 NC_002945.4 1633347 . N . . . . GT ./.
|
|
|
2309 NC_002945.4 1634908 . N . . . . GT ./.
|
|
|
2310 NC_002945.4 1634909 . N . . . . GT ./.
|
|
|
2311 NC_002945.4 1634910 . N . . . . GT ./.
|
|
|
2312 NC_002945.4 1634911 . N . . . . GT ./.
|
|
|
2313 NC_002945.4 1634912 . N . . . . GT ./.
|
|
|
2314 NC_002945.4 1634913 . N . . . . GT ./.
|
|
|
2315 NC_002945.4 1634914 . N . . . . GT ./.
|
|
|
2316 NC_002945.4 1634915 . N . . . . GT ./.
|
|
|
2317 NC_002945.4 1634916 . N . . . . GT ./.
|
|
|
2318 NC_002945.4 1634917 . N . . . . GT ./.
|
|
|
2319 NC_002945.4 1634918 . N . . . . GT ./.
|
|
|
2320 NC_002945.4 1634919 . N . . . . GT ./.
|
|
|
2321 NC_002945.4 1634920 . N . . . . GT ./.
|
|
|
2322 NC_002945.4 1634921 . N . . . . GT ./.
|
|
|
2323 NC_002945.4 1634922 . N . . . . GT ./.
|
|
|
2324 NC_002945.4 1634923 . N . . . . GT ./.
|
|
|
2325 NC_002945.4 1634924 . N . . . . GT ./.
|
|
|
2326 NC_002945.4 1634925 . N . . . . GT ./.
|
|
|
2327 NC_002945.4 1634926 . N . . . . GT ./.
|
|
|
2328 NC_002945.4 1634927 . N . . . . GT ./.
|
|
|
2329 NC_002945.4 1634928 . N . . . . GT ./.
|
|
|
2330 NC_002945.4 1634929 . N . . . . GT ./.
|
|
|
2331 NC_002945.4 1634930 . N . . . . GT ./.
|
|
|
2332 NC_002945.4 1634931 . N . . . . GT ./.
|
|
|
2333 NC_002945.4 1634932 . N . . . . GT ./.
|
|
|
2334 NC_002945.4 1634933 . N . . . . GT ./.
|
|
|
2335 NC_002945.4 1634934 . N . . . . GT ./.
|
|
|
2336 NC_002945.4 1634935 . N . . . . GT ./.
|
|
|
2337 NC_002945.4 1634936 . N . . . . GT ./.
|
|
|
2338 NC_002945.4 1634937 . N . . . . GT ./.
|
|
|
2339 NC_002945.4 1634938 . N . . . . GT ./.
|
|
|
2340 NC_002945.4 1634939 . N . . . . GT ./.
|
|
|
2341 NC_002945.4 1634965 . N . . . . GT ./.
|
|
|
2342 NC_002945.4 1634966 . N . . . . GT ./.
|
|
|
2343 NC_002945.4 1634967 . N . . . . GT ./.
|
|
|
2344 NC_002945.4 1634968 . N . . . . GT ./.
|
|
|
2345 NC_002945.4 1634969 . N . . . . GT ./.
|
|
|
2346 NC_002945.4 1634970 . N . . . . GT ./.
|
|
|
2347 NC_002945.4 1634971 . N . . . . GT ./.
|
|
|
2348 NC_002945.4 1634972 . N . . . . GT ./.
|
|
|
2349 NC_002945.4 1634973 . N . . . . GT ./.
|
|
|
2350 NC_002945.4 1634974 . N . . . . GT ./.
|
|
|
2351 NC_002945.4 1634975 . N . . . . GT ./.
|
|
|
2352 NC_002945.4 1634976 . N . . . . GT ./.
|
|
|
2353 NC_002945.4 1634977 . N . . . . GT ./.
|
|
|
2354 NC_002945.4 1634978 . N . . . . GT ./.
|
|
|
2355 NC_002945.4 1634979 . N . . . . GT ./.
|
|
|
2356 NC_002945.4 1634980 . N . . . . GT ./.
|
|
|
2357 NC_002945.4 1634981 . N . . . . GT ./.
|
|
|
2358 NC_002945.4 1634982 . N . . . . GT ./.
|
|
|
2359 NC_002945.4 1634983 . N . . . . GT ./.
|
|
|
2360 NC_002945.4 1635084 . N . . . . GT ./.
|
|
|
2361 NC_002945.4 1635085 . N . . . . GT ./.
|
|
|
2362 NC_002945.4 1635086 . N . . . . GT ./.
|
|
|
2363 NC_002945.4 1635087 . N . . . . GT ./.
|
|
|
2364 NC_002945.4 1635088 . N . . . . GT ./.
|
|
|
2365 NC_002945.4 1635089 . N . . . . GT ./.
|
|
|
2366 NC_002945.4 1635090 . N . . . . GT ./.
|
|
|
2367 NC_002945.4 1635091 . N . . . . GT ./.
|
|
|
2368 NC_002945.4 1635092 . N . . . . GT ./.
|
|
|
2369 NC_002945.4 1635093 . N . . . . GT ./.
|
|
|
2370 NC_002945.4 1635094 . N . . . . GT ./.
|
|
|
2371 NC_002945.4 1635095 . N . . . . GT ./.
|
|
|
2372 NC_002945.4 1635096 . N . . . . GT ./.
|
|
|
2373 NC_002945.4 1635097 . N . . . . GT ./.
|
|
|
2374 NC_002945.4 1635098 . N . . . . GT ./.
|
|
|
2375 NC_002945.4 1635099 . N . . . . GT ./.
|
|
|
2376 NC_002945.4 1635100 . N . . . . GT ./.
|
|
|
2377 NC_002945.4 1635101 . N . . . . GT ./.
|
|
|
2378 NC_002945.4 1635102 . N . . . . GT ./.
|
|
|
2379 NC_002945.4 1635103 . N . . . . GT ./.
|
|
|
2380 NC_002945.4 1635104 . N . . . . GT ./.
|
|
|
2381 NC_002945.4 1635105 . N . . . . GT ./.
|
|
|
2382 NC_002945.4 1635106 . N . . . . GT ./.
|
|
|
2383 NC_002945.4 1635107 . N . . . . GT ./.
|
|
|
2384 NC_002945.4 1635108 . N . . . . GT ./.
|
|
|
2385 NC_002945.4 1635109 . N . . . . GT ./.
|
|
|
2386 NC_002945.4 1635110 . N . . . . GT ./.
|
|
|
2387 NC_002945.4 1635111 . N . . . . GT ./.
|
|
|
2388 NC_002945.4 1635112 . N . . . . GT ./.
|
|
|
2389 NC_002945.4 1635113 . N . . . . GT ./.
|
|
|
2390 NC_002945.4 1635114 . N . . . . GT ./.
|
|
|
2391 NC_002945.4 1635115 . N . . . . GT ./.
|
|
|
2392 NC_002945.4 1635116 . N . . . . GT ./.
|
|
|
2393 NC_002945.4 1635117 . N . . . . GT ./.
|
|
|
2394 NC_002945.4 1635118 . N . . . . GT ./.
|
|
|
2395 NC_002945.4 1635119 . N . . . . GT ./.
|
|
|
2396 NC_002945.4 1635120 . N . . . . GT ./.
|
|
|
2397 NC_002945.4 1635121 . N . . . . GT ./.
|
|
|
2398 NC_002945.4 1635122 . N . . . . GT ./.
|
|
|
2399 NC_002945.4 1635123 . N . . . . GT ./.
|
|
|
2400 NC_002945.4 1635124 . N . . . . GT ./.
|
|
|
2401 NC_002945.4 1635125 . N . . . . GT ./.
|
|
|
2402 NC_002945.4 1635126 . N . . . . GT ./.
|
|
|
2403 NC_002945.4 1635127 . N . . . . GT ./.
|
|
|
2404 NC_002945.4 1635128 . N . . . . GT ./.
|
|
|
2405 NC_002945.4 1635129 . N . . . . GT ./.
|
|
|
2406 NC_002945.4 1635130 . N . . . . GT ./.
|
|
|
2407 NC_002945.4 1635131 . N . . . . GT ./.
|
|
|
2408 NC_002945.4 1635132 . N . . . . GT ./.
|
|
|
2409 NC_002945.4 1635133 . N . . . . GT ./.
|
|
|
2410 NC_002945.4 1635134 . N . . . . GT ./.
|
|
|
2411 NC_002945.4 1635135 . N . . . . GT ./.
|
|
|
2412 NC_002945.4 1635136 . N . . . . GT ./.
|
|
|
2413 NC_002945.4 1635137 . N . . . . GT ./.
|
|
|
2414 NC_002945.4 1635138 . N . . . . GT ./.
|
|
|
2415 NC_002945.4 1635139 . N . . . . GT ./.
|
|
|
2416 NC_002945.4 1635140 . N . . . . GT ./.
|
|
|
2417 NC_002945.4 1635141 . N . . . . GT ./.
|
|
|
2418 NC_002945.4 1635142 . N . . . . GT ./.
|
|
|
2419 NC_002945.4 1638838 . N . . . . GT ./.
|
|
|
2420 NC_002945.4 1638839 . N . . . . GT ./.
|
|
|
2421 NC_002945.4 1638840 . N . . . . GT ./.
|
|
|
2422 NC_002945.4 1638841 . N . . . . GT ./.
|
|
|
2423 NC_002945.4 1638842 . N . . . . GT ./.
|
|
|
2424 NC_002945.4 1638843 . N . . . . GT ./.
|
|
|
2425 NC_002945.4 1638844 . N . . . . GT ./.
|
|
|
2426 NC_002945.4 1638845 . N . . . . GT ./.
|
|
|
2427 NC_002945.4 1638846 . N . . . . GT ./.
|
|
|
2428 NC_002945.4 1638847 . N . . . . GT ./.
|
|
|
2429 NC_002945.4 1638848 . N . . . . GT ./.
|
|
|
2430 NC_002945.4 1638849 . N . . . . GT ./.
|
|
|
2431 NC_002945.4 1638850 . N . . . . GT ./.
|
|
|
2432 NC_002945.4 1638851 . N . . . . GT ./.
|
|
|
2433 NC_002945.4 1638852 . N . . . . GT ./.
|
|
|
2434 NC_002945.4 1638853 . N . . . . GT ./.
|
|
|
2435 NC_002945.4 1638854 . N . . . . GT ./.
|
|
|
2436 NC_002945.4 1638855 . N . . . . GT ./.
|
|
|
2437 NC_002945.4 1638856 . N . . . . GT ./.
|
|
|
2438 NC_002945.4 1638857 . N . . . . GT ./.
|
|
|
2439 NC_002945.4 1638858 . N . . . . GT ./.
|
|
|
2440 NC_002945.4 1638859 . N . . . . GT ./.
|
|
|
2441 NC_002945.4 1638860 . N . . . . GT ./.
|
|
|
2442 NC_002945.4 1638861 . N . . . . GT ./.
|
|
|
2443 NC_002945.4 1638862 . N . . . . GT ./.
|
|
|
2444 NC_002945.4 1638863 . N . . . . GT ./.
|
|
|
2445 NC_002945.4 1638864 . N . . . . GT ./.
|
|
|
2446 NC_002945.4 1638865 . N . . . . GT ./.
|
|
|
2447 NC_002945.4 1638866 . N . . . . GT ./.
|
|
|
2448 NC_002945.4 1638867 . N . . . . GT ./.
|
|
|
2449 NC_002945.4 1638868 . N . . . . GT ./.
|
|
|
2450 NC_002945.4 1638869 . N . . . . GT ./.
|
|
|
2451 NC_002945.4 1638870 . N . . . . GT ./.
|
|
|
2452 NC_002945.4 1638871 . N . . . . GT ./.
|
|
|
2453 NC_002945.4 1638872 . N . . . . GT ./.
|
|
|
2454 NC_002945.4 1638873 . N . . . . GT ./.
|
|
|
2455 NC_002945.4 1638874 . N . . . . GT ./.
|
|
|
2456 NC_002945.4 1638875 . N . . . . GT ./.
|
|
|
2457 NC_002945.4 1638876 . N . . . . GT ./.
|
|
|
2458 NC_002945.4 1638877 . N . . . . GT ./.
|
|
|
2459 NC_002945.4 1638878 . N . . . . GT ./.
|
|
|
2460 NC_002945.4 1638879 . N . . . . GT ./.
|
|
|
2461 NC_002945.4 1638880 . N . . . . GT ./.
|
|
|
2462 NC_002945.4 1638881 . N . . . . GT ./.
|
|
|
2463 NC_002945.4 1638882 . N . . . . GT ./.
|
|
|
2464 NC_002945.4 1638883 . N . . . . GT ./.
|
|
|
2465 NC_002945.4 1638884 . N . . . . GT ./.
|
|
|
2466 NC_002945.4 1638885 . N . . . . GT ./.
|
|
|
2467 NC_002945.4 1638886 . N . . . . GT ./.
|
|
|
2468 NC_002945.4 1638887 . N . . . . GT ./.
|
|
|
2469 NC_002945.4 1638888 . N . . . . GT ./.
|
|
|
2470 NC_002945.4 1638889 . N . . . . GT ./.
|
|
|
2471 NC_002945.4 1638890 . N . . . . GT ./.
|
|
|
2472 NC_002945.4 1638891 . N . . . . GT ./.
|
|
|
2473 NC_002945.4 1638892 . N . . . . GT ./.
|
|
|
2474 NC_002945.4 1638893 . N . . . . GT ./.
|
|
|
2475 NC_002945.4 1638894 . N . . . . GT ./.
|
|
|
2476 NC_002945.4 1638895 . N . . . . GT ./.
|
|
|
2477 NC_002945.4 1638896 . N . . . . GT ./.
|
|
|
2478 NC_002945.4 1638897 . N . . . . GT ./.
|
|
|
2479 NC_002945.4 1638898 . N . . . . GT ./.
|
|
|
2480 NC_002945.4 1638899 . N . . . . GT ./.
|
|
|
2481 NC_002945.4 1653866 . C A 7017.77 . AC=2;AF=1.00;AN=2;DP=236;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.86;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,235:235:99:7046,697,0
|
|
|
2482 NC_002945.4 1656339 . G A 6701.77 . AC=2;AF=1.00;AN=2;DP=238;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.40;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,236:236:99:6730,697,0
|
|
|
2483 NC_002945.4 1677471 . C G 8913.77 . AC=2;AF=1.00;AN=2;DP=281;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.72;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,281:281:99:8942,840,0
|
|
|
2484 NC_002945.4 1690441 . G A 5534.77 . AC=2;AF=1.00;AN=2;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,179:179:99:5563,533,0
|
|
|
2485 NC_002945.4 1710892 . G T 6488.77 . AC=2;AF=1.00;AN=2;DP=222;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.23;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,222:222:99:6517,662,0
|
|
|
2486 NC_002945.4 1717086 . T C 5856.77 . AC=2;AF=1.00;AN=2;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.36;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,181:181:99:5885,540,0
|
|
|
2487 NC_002945.4 1721256 . C T 7001.77 . AC=2;AF=1.00;AN=2;DP=226;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,225:225:99:7030,671,0
|
|
|
2488 NC_002945.4 1722022 . C A 7001.77 . AC=2;AF=1.00;AN=2;DP=226;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=1.288 GT:AD:DP:GQ:PL 1/1:0,226:226:99:7030,674,0
|
|
|
2489 NC_002945.4 1753812 . C T 8264.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.873;ClippingRankSum=0.000;DP=273;ExcessHet=3.0103;FS=3.755;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.27;ReadPosRankSum=-0.565;SOR=0.771 GT:AD:DP:GQ:PL 1/1:1,272:273:99:8293,805,0
|
|
|
2490 NC_002945.4 1803035 . C T 4713.77 . AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4742,460,0
|
|
|
2491 NC_002945.4 1833330 . A G 6721.77 . AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,218:218:99:6750,651,0
|
|
|
2492 NC_002945.4 1865339 . T G 74.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-1.236;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=105.009;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=1.36;ReadPosRankSum=-3.849;SOR=5.992 GT:AD:DP:GQ:PL 0/1:36,19:55:99:103,0,706
|
|
|
2493 NC_002945.4 1869352 . N . . . . GT ./.
|
|
|
2494 NC_002945.4 1869353 . N . . . . GT ./.
|
|
|
2495 NC_002945.4 1869354 . N . . . . GT ./.
|
|
|
2496 NC_002945.4 1869355 . N . . . . GT ./.
|
|
|
2497 NC_002945.4 1869356 . N . . . . GT ./.
|
|
|
2498 NC_002945.4 1869357 . N . . . . GT ./.
|
|
|
2499 NC_002945.4 1869358 . N . . . . GT ./.
|
|
|
2500 NC_002945.4 1869359 . N . . . . GT ./.
|
|
|
2501 NC_002945.4 1869360 . N . . . . GT ./.
|
|
|
2502 NC_002945.4 1869361 . N . . . . GT ./.
|
|
|
2503 NC_002945.4 1869362 . N . . . . GT ./.
|
|
|
2504 NC_002945.4 1869363 . N . . . . GT ./.
|
|
|
2505 NC_002945.4 1869364 . N . . . . GT ./.
|
|
|
2506 NC_002945.4 1869365 . N . . . . GT ./.
|
|
|
2507 NC_002945.4 1869366 . N . . . . GT ./.
|
|
|
2508 NC_002945.4 1878223 . G A 6601.77 . AC=2;AF=1.00;AN=2;DP=225;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,224:224:99:6630,669,0
|
|
|
2509 NC_002945.4 1880869 . C T 6327.77 . AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.89;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,219:219:99:6356,655,0
|
|
|
2510 NC_002945.4 1915122 . C T 3182.77 . AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=1.072 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3211,307,0
|
|
|
2511 NC_002945.4 1915461 . G C 4512.77 . AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.34;SOR=1.593 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4541,427,0
|
|
|
2512 NC_002945.4 1915936 . A G 7481.77 . AC=2;AF=1.00;AN=2;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.25;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,232:232:99:7510,694,0
|
|
|
2513 NC_002945.4 1920100 . T C 6520.77 . AC=2;AF=1.00;AN=2;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.96;SOR=1.081 GT:AD:DP:GQ:PL 1/1:0,204:204:99:6549,608,0
|
|
|
2514 NC_002945.4 1932972 . A G 4472.77 . AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,150:150:99:4501,446,0
|
|
|
2515 NC_002945.4 1957978 . T G 6175.77 . AC=2;AF=1.00;AN=2;DP=198;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.19;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,198:198:99:6204,592,0
|
|
|
2516 NC_002945.4 1958977 . A T 6046.77 . AC=2;AF=1.00;AN=2;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,185:185:99:6075,548,0
|
|
|
2517 NC_002945.4 1961656 . G A 6173.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.823;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=3.031;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.26;ReadPosRankSum=-0.581;SOR=0.253 GT:AD:DP:GQ:PL 1/1:1,210:211:99:6202,619,0
|
|
|
2518 NC_002945.4 1985737 . N . . . . GT ./.
|
|
|
2519 NC_002945.4 1985738 . N . . . . GT ./.
|
|
|
2520 NC_002945.4 1985739 . N . . . . GT ./.
|
|
|
2521 NC_002945.4 1985740 . N . . . . GT ./.
|
|
|
2522 NC_002945.4 1985741 . N . . . . GT ./.
|
|
|
2523 NC_002945.4 1985742 . N . . . . GT ./.
|
|
|
2524 NC_002945.4 1985743 . N . . . . GT ./.
|
|
|
2525 NC_002945.4 1985744 . N . . . . GT ./.
|
|
|
2526 NC_002945.4 1985745 . N . . . . GT ./.
|
|
|
2527 NC_002945.4 1985746 . N . . . . GT ./.
|
|
|
2528 NC_002945.4 1985747 . N . . . . GT ./.
|
|
|
2529 NC_002945.4 1985748 . N . . . . GT ./.
|
|
|
2530 NC_002945.4 1985749 . N . . . . GT ./.
|
|
|
2531 NC_002945.4 1985750 . N . . . . GT ./.
|
|
|
2532 NC_002945.4 1985751 . N . . . . GT ./.
|
|
|
2533 NC_002945.4 1985752 . N . . . . GT ./.
|
|
|
2534 NC_002945.4 1985753 . N . . . . GT ./.
|
|
|
2535 NC_002945.4 1985754 . N . . . . GT ./.
|
|
|
2536 NC_002945.4 1985755 . N . . . . GT ./.
|
|
|
2537 NC_002945.4 1985756 . N . . . . GT ./.
|
|
|
2538 NC_002945.4 1985757 . N . . . . GT ./.
|
|
|
2539 NC_002945.4 1985758 . N . . . . GT ./.
|
|
|
2540 NC_002945.4 1985759 . N . . . . GT ./.
|
|
|
2541 NC_002945.4 1985760 . N . . . . GT ./.
|
|
|
2542 NC_002945.4 1985761 . N . . . . GT ./.
|
|
|
2543 NC_002945.4 1985762 . N . . . . GT ./.
|
|
|
2544 NC_002945.4 1985763 . N . . . . GT ./.
|
|
|
2545 NC_002945.4 1985764 . N . . . . GT ./.
|
|
|
2546 NC_002945.4 1985765 . N . . . . GT ./.
|
|
|
2547 NC_002945.4 1985766 . N . . . . GT ./.
|
|
|
2548 NC_002945.4 1986716 . N . . . . GT ./.
|
|
|
2549 NC_002945.4 1986717 . N . . . . GT ./.
|
|
|
2550 NC_002945.4 1986718 . N . . . . GT ./.
|
|
|
2551 NC_002945.4 1986719 . N . . . . GT ./.
|
|
|
2552 NC_002945.4 1986720 . N . . . . GT ./.
|
|
|
2553 NC_002945.4 1986721 . N . . . . GT ./.
|
|
|
2554 NC_002945.4 1986722 . N . . . . GT ./.
|
|
|
2555 NC_002945.4 1986723 . N . . . . GT ./.
|
|
|
2556 NC_002945.4 1986724 . N . . . . GT ./.
|
|
|
2557 NC_002945.4 1986894 . N . . . . GT ./.
|
|
|
2558 NC_002945.4 1986895 . N . . . . GT ./.
|
|
|
2559 NC_002945.4 1986896 . N . . . . GT ./.
|
|
|
2560 NC_002945.4 1986897 . N . . . . GT ./.
|
|
|
2561 NC_002945.4 1986898 . N . . . . GT ./.
|
|
|
2562 NC_002945.4 1986899 . N . . . . GT ./.
|
|
|
2563 NC_002945.4 1986900 . N . . . . GT ./.
|
|
|
2564 NC_002945.4 1986901 . N . . . . GT ./.
|
|
|
2565 NC_002945.4 1986902 . N . . . . GT ./.
|
|
|
2566 NC_002945.4 1986903 . N . . . . GT ./.
|
|
|
2567 NC_002945.4 1986904 . N . . . . GT ./.
|
|
|
2568 NC_002945.4 1986905 . N . . . . GT ./.
|
|
|
2569 NC_002945.4 1986906 . N . . . . GT ./.
|
|
|
2570 NC_002945.4 1986907 . N . . . . GT ./.
|
|
|
2571 NC_002945.4 1986908 . N . . . . GT ./.
|
|
|
2572 NC_002945.4 1986909 . N . . . . GT ./.
|
|
|
2573 NC_002945.4 1986910 . N . . . . GT ./.
|
|
|
2574 NC_002945.4 1986911 . N . . . . GT ./.
|
|
|
2575 NC_002945.4 1986912 . N . . . . GT ./.
|
|
|
2576 NC_002945.4 1986913 . N . . . . GT ./.
|
|
|
2577 NC_002945.4 1986914 . N . . . . GT ./.
|
|
|
2578 NC_002945.4 1986915 . N . . . . GT ./.
|
|
|
2579 NC_002945.4 1986916 . N . . . . GT ./.
|
|
|
2580 NC_002945.4 1986917 . N . . . . GT ./.
|
|
|
2581 NC_002945.4 1986918 . N . . . . GT ./.
|
|
|
2582 NC_002945.4 1986919 . N . . . . GT ./.
|
|
|
2583 NC_002945.4 1986920 . N . . . . GT ./.
|
|
|
2584 NC_002945.4 1986921 . N . . . . GT ./.
|
|
|
2585 NC_002945.4 1986922 . N . . . . GT ./.
|
|
|
2586 NC_002945.4 1986923 . N . . . . GT ./.
|
|
|
2587 NC_002945.4 1986924 . N . . . . GT ./.
|
|
|
2588 NC_002945.4 1986925 . N . . . . GT ./.
|
|
|
2589 NC_002945.4 1986926 . N . . . . GT ./.
|
|
|
2590 NC_002945.4 1986927 . N . . . . GT ./.
|
|
|
2591 NC_002945.4 1986928 . N . . . . GT ./.
|
|
|
2592 NC_002945.4 1986929 . N . . . . GT ./.
|
|
|
2593 NC_002945.4 1986930 . N . . . . GT ./.
|
|
|
2594 NC_002945.4 1986931 . N . . . . GT ./.
|
|
|
2595 NC_002945.4 1986932 . N . . . . GT ./.
|
|
|
2596 NC_002945.4 1986933 . N . . . . GT ./.
|
|
|
2597 NC_002945.4 1986934 . N . . . . GT ./.
|
|
|
2598 NC_002945.4 1986935 . N . . . . GT ./.
|
|
|
2599 NC_002945.4 1986936 . N . . . . GT ./.
|
|
|
2600 NC_002945.4 1986937 . N . . . . GT ./.
|
|
|
2601 NC_002945.4 1986938 . N . . . . GT ./.
|
|
|
2602 NC_002945.4 1986939 . N . . . . GT ./.
|
|
|
2603 NC_002945.4 1986940 . N . . . . GT ./.
|
|
|
2604 NC_002945.4 1986941 . N . . . . GT ./.
|
|
|
2605 NC_002945.4 1986942 . N . . . . GT ./.
|
|
|
2606 NC_002945.4 1986943 . N . . . . GT ./.
|
|
|
2607 NC_002945.4 1986944 . N . . . . GT ./.
|
|
|
2608 NC_002945.4 1986945 . N . . . . GT ./.
|
|
|
2609 NC_002945.4 1986946 . N . . . . GT ./.
|
|
|
2610 NC_002945.4 1986947 . N . . . . GT ./.
|
|
|
2611 NC_002945.4 1986948 . N . . . . GT ./.
|
|
|
2612 NC_002945.4 1986949 . N . . . . GT ./.
|
|
|
2613 NC_002945.4 1986950 . N . . . . GT ./.
|
|
|
2614 NC_002945.4 1986951 . N . . . . GT ./.
|
|
|
2615 NC_002945.4 1986952 . N . . . . GT ./.
|
|
|
2616 NC_002945.4 1986953 . N . . . . GT ./.
|
|
|
2617 NC_002945.4 1986954 . N . . . . GT ./.
|
|
|
2618 NC_002945.4 1986955 . N . . . . GT ./.
|
|
|
2619 NC_002945.4 1986956 . N . . . . GT ./.
|
|
|
2620 NC_002945.4 1986957 . N . . . . GT ./.
|
|
|
2621 NC_002945.4 1986958 . N . . . . GT ./.
|
|
|
2622 NC_002945.4 1986959 . N . . . . GT ./.
|
|
|
2623 NC_002945.4 1986960 . N . . . . GT ./.
|
|
|
2624 NC_002945.4 1986961 . N . . . . GT ./.
|
|
|
2625 NC_002945.4 1986962 . N . . . . GT ./.
|
|
|
2626 NC_002945.4 1986963 . N . . . . GT ./.
|
|
|
2627 NC_002945.4 1986964 . N . . . . GT ./.
|
|
|
2628 NC_002945.4 1986965 . N . . . . GT ./.
|
|
|
2629 NC_002945.4 1986966 . N . . . . GT ./.
|
|
|
2630 NC_002945.4 1986967 . N . . . . GT ./.
|
|
|
2631 NC_002945.4 1986968 . N . . . . GT ./.
|
|
|
2632 NC_002945.4 1986969 . N . . . . GT ./.
|
|
|
2633 NC_002945.4 1986970 . N . . . . GT ./.
|
|
|
2634 NC_002945.4 1986971 . N . . . . GT ./.
|
|
|
2635 NC_002945.4 1986972 . N . . . . GT ./.
|
|
|
2636 NC_002945.4 1986973 . N . . . . GT ./.
|
|
|
2637 NC_002945.4 1986974 . N . . . . GT ./.
|
|
|
2638 NC_002945.4 1986975 . N . . . . GT ./.
|
|
|
2639 NC_002945.4 1986976 . N . . . . GT ./.
|
|
|
2640 NC_002945.4 1986977 . N . . . . GT ./.
|
|
|
2641 NC_002945.4 1986978 . N . . . . GT ./.
|
|
|
2642 NC_002945.4 1986979 . N . . . . GT ./.
|
|
|
2643 NC_002945.4 1986980 . N . . . . GT ./.
|
|
|
2644 NC_002945.4 1986981 . N . . . . GT ./.
|
|
|
2645 NC_002945.4 1986982 . N . . . . GT ./.
|
|
|
2646 NC_002945.4 1986983 . N . . . . GT ./.
|
|
|
2647 NC_002945.4 1986984 . N . . . . GT ./.
|
|
|
2648 NC_002945.4 1986985 . N . . . . GT ./.
|
|
|
2649 NC_002945.4 1986986 . N . . . . GT ./.
|
|
|
2650 NC_002945.4 1986987 . N . . . . GT ./.
|
|
|
2651 NC_002945.4 1986988 . N . . . . GT ./.
|
|
|
2652 NC_002945.4 1986989 . N . . . . GT ./.
|
|
|
2653 NC_002945.4 1986990 . N . . . . GT ./.
|
|
|
2654 NC_002945.4 1986991 . N . . . . GT ./.
|
|
|
2655 NC_002945.4 1986992 . N . . . . GT ./.
|
|
|
2656 NC_002945.4 1986993 . N . . . . GT ./.
|
|
|
2657 NC_002945.4 1986994 . N . . . . GT ./.
|
|
|
2658 NC_002945.4 1986995 . N . . . . GT ./.
|
|
|
2659 NC_002945.4 1986996 . N . . . . GT ./.
|
|
|
2660 NC_002945.4 1986997 . N . . . . GT ./.
|
|
|
2661 NC_002945.4 1986998 . N . . . . GT ./.
|
|
|
2662 NC_002945.4 1986999 . N . . . . GT ./.
|
|
|
2663 NC_002945.4 1987000 . N . . . . GT ./.
|
|
|
2664 NC_002945.4 1987001 . N . . . . GT ./.
|
|
|
2665 NC_002945.4 1987002 . N . . . . GT ./.
|
|
|
2666 NC_002945.4 1987003 . N . . . . GT ./.
|
|
|
2667 NC_002945.4 1993034 . N . . . . GT ./.
|
|
|
2668 NC_002945.4 1996036 . G A 326.78 . AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.83;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:355,27,0
|
|
|
2669 NC_002945.4 2002061 . A G 4635.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.163;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.11;ReadPosRankSum=0.701;SOR=0.382 GT:AD:DP:GQ:PL 1/1:3,168:171:99:4664,433,0
|
|
|
2670 NC_002945.4 2007303 . C G 7899.77 . AC=2;AF=1.00;AN=2;DP=246;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=1.049 GT:AD:DP:GQ:PL 1/1:0,246:246:99:7928,734,0
|
|
|
2671 NC_002945.4 2008404 . C T 4159.77 . AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.28;SOR=1.934 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4188,372,0
|
|
|
2672 NC_002945.4 2024890 . T C 7496.73 . AC=2;AF=1.00;AN=2;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.50;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,238:238:99:7534,709,0
|
|
|
2673 NC_002945.4 2027869 . G A 5097.77 . AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.86;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5126,478,0
|
|
|
2674 NC_002945.4 2034234 . T C 4902.77 . AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.36;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4931,500,0
|
|
|
2675 NC_002945.4 2039619 . A G 6316.77 . AC=2;AF=1.00;AN=2;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=1.029 GT:AD:DP:GQ:PL 1/1:0,204:204:99:6345,609,0
|
|
|
2676 NC_002945.4 2046882 . C T 6264.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.667;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=3.573;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.27;ReadPosRankSum=1.646;SOR=0.646 GT:AD:DP:GQ:PL 1/1:1,213:214:99:6293,613,0
|
|
|
2677 NC_002945.4 2049171 . A G 6167.77 . AC=2;AF=1.00;AN=2;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,163:163:99:6196,489,0
|
|
|
2678 NC_002945.4 2050664 . C T 8179.77 . AC=2;AF=1.00;AN=2;DP=256;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.08;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,255:255:99:8208,764,0
|
|
|
2679 NC_002945.4 2056922 . N . . . . GT ./.
|
|
|
2680 NC_002945.4 2057553 . G A 3620.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.716;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.85;ReadPosRankSum=-0.546;SOR=0.300 GT:AD:DP:GQ:PL 1/1:1,129:130:99:3649,372,0
|
|
|
2681 NC_002945.4 2059249 . G A 8270.77 . AC=2;AF=1.00;AN=2;DP=274;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.19;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,274:274:99:8299,819,0
|
|
|
2682 NC_002945.4 2059920 . A G 6969.77 . AC=2;AF=1.00;AN=2;DP=231;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.30;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,230:230:99:6998,688,0
|
|
|
2683 NC_002945.4 2075405 . C T 5955.77 . AC=2;AF=1.00;AN=2;DP=192;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.18;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,191:191:99:5984,571,0
|
|
|
2684 NC_002945.4 2087039 . A C 7578.77 . AC=2;AF=1.00;AN=2;DP=229;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,228:228:99:7607,684,0
|
|
|
2685 NC_002945.4 2089475 . C T 7024.77 . AC=2;AF=1.00;AN=2;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.36;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,224:224:99:7053,666,0
|
|
|
2686 NC_002945.4 2099043 . T C 5887.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.359;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.26;ReadPosRankSum=-0.407;SOR=0.386 GT:AD:DP:GQ:PL 1/1:1,176:177:99:5916,488,0
|
|
|
2687 NC_002945.4 2108042 . G A 5460.77 . AC=2;AF=1.00;AN=2;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.36;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,186:186:99:5489,551,0
|
|
|
2688 NC_002945.4 2108312 . C T 7807.77 . AC=2;AF=1.00;AN=2;DP=262;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.91;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,261:261:99:7836,779,0
|
|
|
2689 NC_002945.4 2116802 . C T 6517.77 . AC=2;AF=1.00;AN=2;DP=221;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.49;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,221:221:99:6546,659,0
|
|
|
2690 NC_002945.4 2120728 . C T 5851.77 . AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.98;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,183:183:99:5880,546,0
|
|
|
2691 NC_002945.4 2145868 . T C 7883.77 . AC=2;AF=1.00;AN=2;DP=256;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=0.861 GT:AD:DP:GQ:PL 1/1:0,256:256:99:7912,766,0
|
|
|
2692 NC_002945.4 2161367 . C T 2086.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.011;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=11.585;MLEAC=1;MLEAF=0.500;MQ=59.18;MQRankSum=1.624;QD=19.50;ReadPosRankSum=5.757;SOR=1.811 GT:AD:DP:GQ:PL 0/1:31,76:107:99:2115,0,214
|
|
|
2693 NC_002945.4 2177828 . C G 7112.77 . AC=2;AF=1.00;AN=2;DP=216;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,215:215:99:7141,642,0
|
|
|
2694 NC_002945.4 2193109 . C G 281.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-3.680;ClippingRankSum=0.000;DP=313;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.21;MQRankSum=-10.050;QD=0.90;ReadPosRankSum=1.812;SOR=0.696 GT:AD:DP:GQ:PL 0/1:265,48:313:99:310,0,7482
|
|
|
2695 NC_002945.4 2215255 . G A 3632.77 . AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.94;SOR=2.780 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3661,374,0
|
|
|
2696 NC_002945.4 2219072 . G A 4901.77 . AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.97;QD=32.04;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,153:153:99:4930,457,0
|
|
|
2697 NC_002945.4 2222708 . C G 5927.77 . AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,176:176:99:5956,526,0
|
|
|
2698 NC_002945.4 2244454 . C G 4260.77 . AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.98;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4289,438,0
|
|
|
2699 NC_002945.4 2246992 . C G 6960.77 . AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=0.986 GT:AD:DP:GQ:PL 1/1:0,207:207:99:6989,619,0
|
|
|
2700 NC_002945.4 2249617 . A G 7626.77 . AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,250:250:99:7655,748,0
|
|
|
2701 NC_002945.4 2256653 . C A 4626.77 . AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4655,491,0
|
|
|
2702 NC_002945.4 2257546 . C A 5685.77 . AC=2;AF=1.00;AN=2;DP=190;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.93;SOR=1.464 GT:AD:DP:GQ:PL 1/1:0,190:190:99:5714,561,0
|
|
|
2703 NC_002945.4 2283200 . A G 6928.77 . AC=2;AF=1.00;AN=2;DP=215;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.89;QD=32.23;SOR=0.951 GT:AD:DP:GQ:PL 1/1:0,215:215:99:6957,643,0
|
|
|
2704 NC_002945.4 2283218 . C G 9639.77 . AC=2;AF=1.00;AN=2;DP=215;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.89;QD=28.36;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,215:215:99:9668,647,0
|
|
|
2705 NC_002945.4 2283220 . A G 9729.77 . AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.89;QD=33.10;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,214:214:99:9758,653,0
|
|
|
2706 NC_002945.4 2283227 . A G 9871.77 . AC=2;AF=1.00;AN=2;DP=216;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.89;QD=30.82;SOR=0.916 GT:AD:DP:GQ:PL 1/1:0,216:216:99:9900,662,0
|
|
|
2707 NC_002945.4 2283235 . G A 10164.77 . AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.89;QD=30.58;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,214:214:99:10193,689,0
|
|
|
2708 NC_002945.4 2283236 . G C 10164.77 . AC=2;AF=1.00;AN=2;DP=222;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.90;QD=28.92;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,222:222:99:10193,689,0
|
|
|
2709 NC_002945.4 2283350 . C T 6648.77 . AC=2;AF=1.00;AN=2;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.62;SOR=1.233 GT:AD:DP:GQ:PL 1/1:0,149:149:99:6677,449,0
|
|
|
2710 NC_002945.4 2283353 . G T 6648.77 . AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=1.202 GT:AD:DP:GQ:PL 1/1:0,147:147:99:6677,449,0
|
|
|
2711 NC_002945.4 2283355 . G C 6586.77 . AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.88;SOR=1.202 GT:AD:DP:GQ:PL 1/1:0,147:147:99:6615,442,0
|
|
|
2712 NC_002945.4 2283362 . A T 6576.77 . AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.64;SOR=1.237 GT:AD:DP:GQ:PL 1/1:0,140:140:99:6605,442,0
|
|
|
2713 NC_002945.4 2283371 . C A 6251.77 . AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.91;SOR=1.253 GT:AD:DP:GQ:PL 1/1:0,140:140:99:6280,421,0
|
|
|
2714 NC_002945.4 2284754 . G C 4336.77 . AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.94;QD=31.37;SOR=1.921 GT:AD:DP:GQ:PL 1/1:0,97:97:99:4365,292,0
|
|
|
2715 NC_002945.4 2302484 . N . . . . GT ./.
|
|
|
2716 NC_002945.4 2324495 . N . . . . GT ./.
|
|
|
2717 NC_002945.4 2324496 . N . . . . GT ./.
|
|
|
2718 NC_002945.4 2324497 . N . . . . GT ./.
|
|
|
2719 NC_002945.4 2324498 . N . . . . GT ./.
|
|
|
2720 NC_002945.4 2324499 . N . . . . GT ./.
|
|
|
2721 NC_002945.4 2324500 . N . . . . GT ./.
|
|
|
2722 NC_002945.4 2324501 . N . . . . GT ./.
|
|
|
2723 NC_002945.4 2324502 . N . . . . GT ./.
|
|
|
2724 NC_002945.4 2326263 . N . . . . GT ./.
|
|
|
2725 NC_002945.4 2326264 . N . . . . GT ./.
|
|
|
2726 NC_002945.4 2326265 . N . . . . GT ./.
|
|
|
2727 NC_002945.4 2326266 . N . . . . GT ./.
|
|
|
2728 NC_002945.4 2326267 . N . . . . GT ./.
|
|
|
2729 NC_002945.4 2326268 . N . . . . GT ./.
|
|
|
2730 NC_002945.4 2326269 . N . . . . GT ./.
|
|
|
2731 NC_002945.4 2326270 . N . . . . GT ./.
|
|
|
2732 NC_002945.4 2326271 . N . . . . GT ./.
|
|
|
2733 NC_002945.4 2326272 . N . . . . GT ./.
|
|
|
2734 NC_002945.4 2326273 . N . . . . GT ./.
|
|
|
2735 NC_002945.4 2333994 . T C 7720.77 . AC=2;AF=1.00;AN=2;DP=245;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,243:243:99:7749,725,0
|
|
|
2736 NC_002945.4 2338765 . G A 5989.77 . AC=2;AF=1.00;AN=2;DP=199;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.10;SOR=1.279 GT:AD:DP:GQ:PL 1/1:0,199:199:99:6018,594,0
|
|
|
2737 NC_002945.4 2339770 . A G 5565.77 . AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.55;SOR=1.120 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5594,510,0
|
|
|
2738 NC_002945.4 2352707 . C T 7210.77 . AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.55;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,236:236:99:7239,705,0
|
|
|
2739 NC_002945.4 2358298 . T C 5920.77 . AC=2;AF=1.00;AN=2;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.88;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,169:169:99:5949,505,0
|
|
|
2740 NC_002945.4 2361398 . T C 6770.77 . AC=2;AF=1.00;AN=2;DP=208;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.55;SOR=1.047 GT:AD:DP:GQ:PL 1/1:0,208:208:99:6799,624,0
|
|
|
2741 NC_002945.4 2372351 . N . . . . GT ./.
|
|
|
2742 NC_002945.4 2372352 . N . . . . GT ./.
|
|
|
2743 NC_002945.4 2372353 . N . . . . GT ./.
|
|
|
2744 NC_002945.4 2375846 . G A 4938.77 . AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.75;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,166:166:99:4967,491,0
|
|
|
2745 NC_002945.4 2378324 . C T 5735.77 . AC=2;AF=1.00;AN=2;DP=190;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.19;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,190:190:99:5764,567,0
|
|
|
2746 NC_002945.4 2381437 . C A 6839.77 . AC=2;AF=1.00;AN=2;DP=208;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,208:208:99:6868,623,0
|
|
|
2747 NC_002945.4 2397934 . C T 3937.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.420;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.95;ReadPosRankSum=0.395;SOR=1.329 GT:AD:DP:GQ:PL 1/1:2,134:136:99:3966,380,0
|
|
|
2748 NC_002945.4 2408940 . N . . . . GT ./.
|
|
|
2749 NC_002945.4 2408941 . N . . . . GT ./.
|
|
|
2750 NC_002945.4 2408942 . N . . . . GT ./.
|
|
|
2751 NC_002945.4 2408943 . N . . . . GT ./.
|
|
|
2752 NC_002945.4 2408944 . N . . . . GT ./.
|
|
|
2753 NC_002945.4 2408945 . N . . . . GT ./.
|
|
|
2754 NC_002945.4 2408946 . N . . . . GT ./.
|
|
|
2755 NC_002945.4 2408947 . N . . . . GT ./.
|
|
|
2756 NC_002945.4 2408948 . N . . . . GT ./.
|
|
|
2757 NC_002945.4 2408949 . N . . . . GT ./.
|
|
|
2758 NC_002945.4 2408950 . N . . . . GT ./.
|
|
|
2759 NC_002945.4 2408951 . N . . . . GT ./.
|
|
|
2760 NC_002945.4 2408952 . N . . . . GT ./.
|
|
|
2761 NC_002945.4 2408953 . N . . . . GT ./.
|
|
|
2762 NC_002945.4 2408954 . N . . . . GT ./.
|
|
|
2763 NC_002945.4 2408955 . N . . . . GT ./.
|
|
|
2764 NC_002945.4 2408956 . N . . . . GT ./.
|
|
|
2765 NC_002945.4 2408957 . N . . . . GT ./.
|
|
|
2766 NC_002945.4 2408958 . N . . . . GT ./.
|
|
|
2767 NC_002945.4 2408959 . N . . . . GT ./.
|
|
|
2768 NC_002945.4 2408960 . N . . . . GT ./.
|
|
|
2769 NC_002945.4 2408961 . N . . . . GT ./.
|
|
|
2770 NC_002945.4 2408962 . N . . . . GT ./.
|
|
|
2771 NC_002945.4 2408963 . N . . . . GT ./.
|
|
|
2772 NC_002945.4 2408964 . N . . . . GT ./.
|
|
|
2773 NC_002945.4 2408965 . N . . . . GT ./.
|
|
|
2774 NC_002945.4 2408966 . N . . . . GT ./.
|
|
|
2775 NC_002945.4 2409027 . N . . . . GT ./.
|
|
|
2776 NC_002945.4 2409028 . N . . . . GT ./.
|
|
|
2777 NC_002945.4 2409029 . N . . . . GT ./.
|
|
|
2778 NC_002945.4 2409030 . N . . . . GT ./.
|
|
|
2779 NC_002945.4 2409031 . N . . . . GT ./.
|
|
|
2780 NC_002945.4 2409032 . N . . . . GT ./.
|
|
|
2781 NC_002945.4 2412437 . G A 4272.77 . AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.88;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4301,426,0
|
|
|
2782 NC_002945.4 2418267 . G A 4675.77 . AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4704,430,0
|
|
|
2783 NC_002945.4 2422964 . G A 1263.77 . AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=35.93;QD=30.99;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1292,102,0
|
|
|
2784 NC_002945.4 2423049 . T G 1170.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.785;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=3.724;MLEAC=2;MLEAF=1.00;MQ=35.67;MQRankSum=-1.695;QD=28.90;ReadPosRankSum=2.025;SOR=0.829 GT:AD:DP:GQ:PL 1/1:1,32:33:89:1199,89,0
|
|
|
2785 NC_002945.4 2423995 . C T 7468.77 . AC=2;AF=1.00;AN=2;DP=229;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,229:229:99:7497,687,0
|
|
|
2786 NC_002945.4 2426072 . G A 5302.77 . AC=2;AF=1.00;AN=2;DP=181;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.62;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,179:179:99:5331,531,0
|
|
|
2787 NC_002945.4 2437018 . G T 7445.77 . AC=2;AF=1.00;AN=2;DP=238;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.28;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,238:238:99:7474,711,0
|
|
|
2788 NC_002945.4 2458252 . C T 7591.77 . AC=2;AF=1.00;AN=2;DP=253;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=1.069 GT:AD:DP:GQ:PL 1/1:0,253:253:99:7620,753,0
|
|
|
2789 NC_002945.4 2479007 . C T 6662.77 . AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.70;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,217:217:99:6691,646,0
|
|
|
2790 NC_002945.4 2497022 . C G 6939.77 . AC=2;AF=1.00;AN=2;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,213:213:99:6968,636,0
|
|
|
2791 NC_002945.4 2506199 . A C 6552.77 . AC=2;AF=1.00;AN=2;DP=210;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,209:209:99:6581,627,0
|
|
|
2792 NC_002945.4 2508626 . G T 7427.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=3.285;ClippingRankSum=0.000;DP=270;ExcessHet=3.0103;FS=9.527;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.61;ReadPosRankSum=0.611;SOR=0.230 GT:AD:DP:GQ:PL 1/1:3,266:269:99:7456,766,0
|
|
|
2793 NC_002945.4 2513801 . C A 5206.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.505;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=7.529;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.10;ReadPosRankSum=-0.609;SOR=0.732 GT:AD:DP:GQ:PL 1/1:2,171:173:99:5235,494,0
|
|
|
2794 NC_002945.4 2524942 . G A 4395.77 . AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4424,430,0
|
|
|
2795 NC_002945.4 2528517 . T C 7829.77 . AC=2;AF=1.00;AN=2;DP=246;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,246:246:99:7858,736,0
|
|
|
2796 NC_002945.4 2529413 . G C 5576.77 . AC=2;AF=1.00;AN=2;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.00;SOR=1.159 GT:AD:DP:GQ:PL 1/1:0,169:169:99:5605,505,0
|
|
|
2797 NC_002945.4 2532958 . G A 5383.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.822;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=3.468;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.91;ReadPosRankSum=2.080;SOR=0.573 GT:AD:DP:GQ:PL 1/1:1,179:180:99:5412,527,0
|
|
|
2798 NC_002945.4 2580771 . G C 4685.77 . AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=0.982 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4714,439,0
|
|
|
2799 NC_002945.4 2597320 . T C 6883.77 . AC=2;AF=1.00;AN=2;DP=216;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.02;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,215:215:99:6912,643,0
|
|
|
2800 NC_002945.4 2598183 . A G 7746.77 . AC=2;AF=1.00;AN=2;DP=242;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,242:242:99:7775,722,0
|
|
|
2801 NC_002945.4 2620373 . G A 3481.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.013;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=3.081;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.08;ReadPosRankSum=-2.496;SOR=0.301 GT:AD:DP:GQ:PL 1/1:1,123:124:99:3510,359,0
|
|
|
2802 NC_002945.4 2667489 . T C 7244.77 . AC=2;AF=1.00;AN=2;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.78;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,228:228:99:7273,680,0
|
|
|
2803 NC_002945.4 2676561 . G C 8587.77 . AC=2;AF=1.00;AN=2;DP=277;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.00;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,277:277:99:8616,829,0
|
|
|
2804 NC_002945.4 2684022 . N . . . . GT ./.
|
|
|
2805 NC_002945.4 2768189 . N . . . . GT ./.
|
|
|
2806 NC_002945.4 2773444 . G A 55.74 . AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0
|
|
|
2807 NC_002945.4 2774141 . N . . . . GT ./.
|
|
|
2808 NC_002945.4 2774142 . N . . . . GT ./.
|
|
|
2809 NC_002945.4 2775791 . N . . . . GT ./.
|
|
|
2810 NC_002945.4 2775792 . N . . . . GT ./.
|
|
|
2811 NC_002945.4 2775793 . N . . . . GT ./.
|
|
|
2812 NC_002945.4 2775794 . N . . . . GT ./.
|
|
|
2813 NC_002945.4 2775795 . N . . . . GT ./.
|
|
|
2814 NC_002945.4 2775796 . N . . . . GT ./.
|
|
|
2815 NC_002945.4 2775797 . N . . . . GT ./.
|
|
|
2816 NC_002945.4 2775798 . N . . . . GT ./.
|
|
|
2817 NC_002945.4 2775799 . N . . . . GT ./.
|
|
|
2818 NC_002945.4 2775800 . N . . . . GT ./.
|
|
|
2819 NC_002945.4 2775801 . N . . . . GT ./.
|
|
|
2820 NC_002945.4 2775802 . N . . . . GT ./.
|
|
|
2821 NC_002945.4 2775803 . N . . . . GT ./.
|
|
|
2822 NC_002945.4 2775804 . N . . . . GT ./.
|
|
|
2823 NC_002945.4 2775805 . N . . . . GT ./.
|
|
|
2824 NC_002945.4 2775806 . N . . . . GT ./.
|
|
|
2825 NC_002945.4 2775807 . N . . . . GT ./.
|
|
|
2826 NC_002945.4 2775808 . N . . . . GT ./.
|
|
|
2827 NC_002945.4 2775809 . N . . . . GT ./.
|
|
|
2828 NC_002945.4 2775810 . N . . . . GT ./.
|
|
|
2829 NC_002945.4 2775811 . N . . . . GT ./.
|
|
|
2830 NC_002945.4 2775812 . N . . . . GT ./.
|
|
|
2831 NC_002945.4 2775813 . N . . . . GT ./.
|
|
|
2832 NC_002945.4 2775814 . N . . . . GT ./.
|
|
|
2833 NC_002945.4 2775815 . N . . . . GT ./.
|
|
|
2834 NC_002945.4 2775816 . N . . . . GT ./.
|
|
|
2835 NC_002945.4 2775817 . N . . . . GT ./.
|
|
|
2836 NC_002945.4 2775818 . N . . . . GT ./.
|
|
|
2837 NC_002945.4 2775819 . N . . . . GT ./.
|
|
|
2838 NC_002945.4 2775820 . N . . . . GT ./.
|
|
|
2839 NC_002945.4 2775821 . N . . . . GT ./.
|
|
|
2840 NC_002945.4 2775822 . N . . . . GT ./.
|
|
|
2841 NC_002945.4 2775823 . N . . . . GT ./.
|
|
|
2842 NC_002945.4 2775824 . N . . . . GT ./.
|
|
|
2843 NC_002945.4 2775825 . N . . . . GT ./.
|
|
|
2844 NC_002945.4 2775826 . N . . . . GT ./.
|
|
|
2845 NC_002945.4 2775827 . N . . . . GT ./.
|
|
|
2846 NC_002945.4 2775828 . N . . . . GT ./.
|
|
|
2847 NC_002945.4 2775829 . N . . . . GT ./.
|
|
|
2848 NC_002945.4 2775830 . N . . . . GT ./.
|
|
|
2849 NC_002945.4 2775831 . N . . . . GT ./.
|
|
|
2850 NC_002945.4 2775832 . N . . . . GT ./.
|
|
|
2851 NC_002945.4 2775833 . N . . . . GT ./.
|
|
|
2852 NC_002945.4 2776161 . N . . . . GT ./.
|
|
|
2853 NC_002945.4 2776162 . N . . . . GT ./.
|
|
|
2854 NC_002945.4 2776163 . N . . . . GT ./.
|
|
|
2855 NC_002945.4 2776164 . N . . . . GT ./.
|
|
|
2856 NC_002945.4 2776165 . N . . . . GT ./.
|
|
|
2857 NC_002945.4 2776166 . N . . . . GT ./.
|
|
|
2858 NC_002945.4 2776167 . N . . . . GT ./.
|
|
|
2859 NC_002945.4 2776168 . N . . . . GT ./.
|
|
|
2860 NC_002945.4 2776169 . N . . . . GT ./.
|
|
|
2861 NC_002945.4 2776170 . N . . . . GT ./.
|
|
|
2862 NC_002945.4 2776171 . N . . . . GT ./.
|
|
|
2863 NC_002945.4 2776172 . N . . . . GT ./.
|
|
|
2864 NC_002945.4 2776173 . N . . . . GT ./.
|
|
|
2865 NC_002945.4 2776174 . N . . . . GT ./.
|
|
|
2866 NC_002945.4 2776175 . N . . . . GT ./.
|
|
|
2867 NC_002945.4 2776176 . N . . . . GT ./.
|
|
|
2868 NC_002945.4 2776177 . N . . . . GT ./.
|
|
|
2869 NC_002945.4 2776178 . N . . . . GT ./.
|
|
|
2870 NC_002945.4 2776179 . N . . . . GT ./.
|
|
|
2871 NC_002945.4 2776180 . N . . . . GT ./.
|
|
|
2872 NC_002945.4 2776181 . N . . . . GT ./.
|
|
|
2873 NC_002945.4 2776182 . N . . . . GT ./.
|
|
|
2874 NC_002945.4 2776183 . N . . . . GT ./.
|
|
|
2875 NC_002945.4 2776184 . N . . . . GT ./.
|
|
|
2876 NC_002945.4 2776185 . N . . . . GT ./.
|
|
|
2877 NC_002945.4 2776186 . N . . . . GT ./.
|
|
|
2878 NC_002945.4 2776187 . N . . . . GT ./.
|
|
|
2879 NC_002945.4 2776188 . N . . . . GT ./.
|
|
|
2880 NC_002945.4 2776189 . N . . . . GT ./.
|
|
|
2881 NC_002945.4 2776190 . N . . . . GT ./.
|
|
|
2882 NC_002945.4 2776191 . N . . . . GT ./.
|
|
|
2883 NC_002945.4 2776192 . N . . . . GT ./.
|
|
|
2884 NC_002945.4 2776193 . N . . . . GT ./.
|
|
|
2885 NC_002945.4 2776194 . N . . . . GT ./.
|
|
|
2886 NC_002945.4 2776195 . N . . . . GT ./.
|
|
|
2887 NC_002945.4 2776196 . N . . . . GT ./.
|
|
|
2888 NC_002945.4 2776197 . N . . . . GT ./.
|
|
|
2889 NC_002945.4 2776198 . N . . . . GT ./.
|
|
|
2890 NC_002945.4 2776199 . N . . . . GT ./.
|
|
|
2891 NC_002945.4 2776200 . N . . . . GT ./.
|
|
|
2892 NC_002945.4 2776201 . N . . . . GT ./.
|
|
|
2893 NC_002945.4 2776202 . N . . . . GT ./.
|
|
|
2894 NC_002945.4 2776203 . N . . . . GT ./.
|
|
|
2895 NC_002945.4 2776204 . N . . . . GT ./.
|
|
|
2896 NC_002945.4 2776205 . N . . . . GT ./.
|
|
|
2897 NC_002945.4 2776206 . N . . . . GT ./.
|
|
|
2898 NC_002945.4 2776207 . N . . . . GT ./.
|
|
|
2899 NC_002945.4 2776208 . N . . . . GT ./.
|
|
|
2900 NC_002945.4 2776209 . N . . . . GT ./.
|
|
|
2901 NC_002945.4 2776210 . N . . . . GT ./.
|
|
|
2902 NC_002945.4 2776211 . N . . . . GT ./.
|
|
|
2903 NC_002945.4 2776212 . N . . . . GT ./.
|
|
|
2904 NC_002945.4 2776213 . N . . . . GT ./.
|
|
|
2905 NC_002945.4 2776214 . N . . . . GT ./.
|
|
|
2906 NC_002945.4 2776215 . N . . . . GT ./.
|
|
|
2907 NC_002945.4 2776216 . N . . . . GT ./.
|
|
|
2908 NC_002945.4 2776217 . N . . . . GT ./.
|
|
|
2909 NC_002945.4 2776218 . N . . . . GT ./.
|
|
|
2910 NC_002945.4 2776219 . N . . . . GT ./.
|
|
|
2911 NC_002945.4 2776220 . N . . . . GT ./.
|
|
|
2912 NC_002945.4 2776221 . N . . . . GT ./.
|
|
|
2913 NC_002945.4 2776222 . N . . . . GT ./.
|
|
|
2914 NC_002945.4 2776223 . N . . . . GT ./.
|
|
|
2915 NC_002945.4 2776224 . N . . . . GT ./.
|
|
|
2916 NC_002945.4 2776225 . N . . . . GT ./.
|
|
|
2917 NC_002945.4 2776226 . N . . . . GT ./.
|
|
|
2918 NC_002945.4 2776227 . N . . . . GT ./.
|
|
|
2919 NC_002945.4 2776228 . N . . . . GT ./.
|
|
|
2920 NC_002945.4 2776229 . N . . . . GT ./.
|
|
|
2921 NC_002945.4 2776230 . N . . . . GT ./.
|
|
|
2922 NC_002945.4 2776231 . N . . . . GT ./.
|
|
|
2923 NC_002945.4 2776232 . N . . . . GT ./.
|
|
|
2924 NC_002945.4 2776233 . N . . . . GT ./.
|
|
|
2925 NC_002945.4 2776234 . N . . . . GT ./.
|
|
|
2926 NC_002945.4 2776235 . N . . . . GT ./.
|
|
|
2927 NC_002945.4 2776236 . N . . . . GT ./.
|
|
|
2928 NC_002945.4 2776237 . N . . . . GT ./.
|
|
|
2929 NC_002945.4 2776238 . N . . . . GT ./.
|
|
|
2930 NC_002945.4 2776239 . N . . . . GT ./.
|
|
|
2931 NC_002945.4 2776240 . N . . . . GT ./.
|
|
|
2932 NC_002945.4 2776241 . N . . . . GT ./.
|
|
|
2933 NC_002945.4 2776242 . N . . . . GT ./.
|
|
|
2934 NC_002945.4 2776243 . N . . . . GT ./.
|
|
|
2935 NC_002945.4 2776244 . N . . . . GT ./.
|
|
|
2936 NC_002945.4 2776245 . N . . . . GT ./.
|
|
|
2937 NC_002945.4 2776246 . N . . . . GT ./.
|
|
|
2938 NC_002945.4 2776247 . N . . . . GT ./.
|
|
|
2939 NC_002945.4 2776248 . N . . . . GT ./.
|
|
|
2940 NC_002945.4 2776249 . N . . . . GT ./.
|
|
|
2941 NC_002945.4 2776250 . N . . . . GT ./.
|
|
|
2942 NC_002945.4 2776251 . N . . . . GT ./.
|
|
|
2943 NC_002945.4 2776252 . N . . . . GT ./.
|
|
|
2944 NC_002945.4 2776253 . N . . . . GT ./.
|
|
|
2945 NC_002945.4 2776254 . N . . . . GT ./.
|
|
|
2946 NC_002945.4 2776255 . N . . . . GT ./.
|
|
|
2947 NC_002945.4 2776256 . N . . . . GT ./.
|
|
|
2948 NC_002945.4 2776257 . N . . . . GT ./.
|
|
|
2949 NC_002945.4 2776258 . N . . . . GT ./.
|
|
|
2950 NC_002945.4 2776259 . N . . . . GT ./.
|
|
|
2951 NC_002945.4 2776260 . N . . . . GT ./.
|
|
|
2952 NC_002945.4 2776261 . N . . . . GT ./.
|
|
|
2953 NC_002945.4 2776262 . N . . . . GT ./.
|
|
|
2954 NC_002945.4 2776263 . N . . . . GT ./.
|
|
|
2955 NC_002945.4 2776264 . N . . . . GT ./.
|
|
|
2956 NC_002945.4 2776265 . N . . . . GT ./.
|
|
|
2957 NC_002945.4 2776266 . N . . . . GT ./.
|
|
|
2958 NC_002945.4 2776267 . N . . . . GT ./.
|
|
|
2959 NC_002945.4 2776268 . N . . . . GT ./.
|
|
|
2960 NC_002945.4 2776269 . N . . . . GT ./.
|
|
|
2961 NC_002945.4 2776270 . N . . . . GT ./.
|
|
|
2962 NC_002945.4 2776271 . N . . . . GT ./.
|
|
|
2963 NC_002945.4 2776272 . N . . . . GT ./.
|
|
|
2964 NC_002945.4 2776273 . N . . . . GT ./.
|
|
|
2965 NC_002945.4 2776274 . N . . . . GT ./.
|
|
|
2966 NC_002945.4 2776275 . N . . . . GT ./.
|
|
|
2967 NC_002945.4 2776276 . N . . . . GT ./.
|
|
|
2968 NC_002945.4 2776277 . N . . . . GT ./.
|
|
|
2969 NC_002945.4 2776278 . N . . . . GT ./.
|
|
|
2970 NC_002945.4 2776279 . N . . . . GT ./.
|
|
|
2971 NC_002945.4 2776280 . N . . . . GT ./.
|
|
|
2972 NC_002945.4 2776281 . N . . . . GT ./.
|
|
|
2973 NC_002945.4 2776282 . N . . . . GT ./.
|
|
|
2974 NC_002945.4 2776283 . N . . . . GT ./.
|
|
|
2975 NC_002945.4 2776284 . N . . . . GT ./.
|
|
|
2976 NC_002945.4 2776285 . N . . . . GT ./.
|
|
|
2977 NC_002945.4 2776286 . N . . . . GT ./.
|
|
|
2978 NC_002945.4 2776287 . N . . . . GT ./.
|
|
|
2979 NC_002945.4 2776288 . N . . . . GT ./.
|
|
|
2980 NC_002945.4 2776289 . N . . . . GT ./.
|
|
|
2981 NC_002945.4 2776290 . N . . . . GT ./.
|
|
|
2982 NC_002945.4 2776291 . N . . . . GT ./.
|
|
|
2983 NC_002945.4 2776292 . N . . . . GT ./.
|
|
|
2984 NC_002945.4 2776293 . N . . . . GT ./.
|
|
|
2985 NC_002945.4 2776294 . N . . . . GT ./.
|
|
|
2986 NC_002945.4 2776295 . N . . . . GT ./.
|
|
|
2987 NC_002945.4 2776296 . N . . . . GT ./.
|
|
|
2988 NC_002945.4 2776297 . N . . . . GT ./.
|
|
|
2989 NC_002945.4 2776298 . N . . . . GT ./.
|
|
|
2990 NC_002945.4 2776299 . N . . . . GT ./.
|
|
|
2991 NC_002945.4 2776300 . N . . . . GT ./.
|
|
|
2992 NC_002945.4 2776301 . N . . . . GT ./.
|
|
|
2993 NC_002945.4 2776302 . N . . . . GT ./.
|
|
|
2994 NC_002945.4 2776303 . N . . . . GT ./.
|
|
|
2995 NC_002945.4 2776304 . N . . . . GT ./.
|
|
|
2996 NC_002945.4 2776305 . N . . . . GT ./.
|
|
|
2997 NC_002945.4 2776306 . N . . . . GT ./.
|
|
|
2998 NC_002945.4 2776307 . N . . . . GT ./.
|
|
|
2999 NC_002945.4 2776308 . N . . . . GT ./.
|
|
|
3000 NC_002945.4 2776309 . N . . . . GT ./.
|
|
|
3001 NC_002945.4 2776310 . N . . . . GT ./.
|
|
|
3002 NC_002945.4 2776311 . N . . . . GT ./.
|
|
|
3003 NC_002945.4 2776312 . N . . . . GT ./.
|
|
|
3004 NC_002945.4 2776313 . N . . . . GT ./.
|
|
|
3005 NC_002945.4 2776314 . N . . . . GT ./.
|
|
|
3006 NC_002945.4 2776315 . N . . . . GT ./.
|
|
|
3007 NC_002945.4 2776316 . N . . . . GT ./.
|
|
|
3008 NC_002945.4 2776317 . N . . . . GT ./.
|
|
|
3009 NC_002945.4 2776318 . N . . . . GT ./.
|
|
|
3010 NC_002945.4 2776319 . N . . . . GT ./.
|
|
|
3011 NC_002945.4 2776320 . N . . . . GT ./.
|
|
|
3012 NC_002945.4 2776565 . N . . . . GT ./.
|
|
|
3013 NC_002945.4 2776566 . N . . . . GT ./.
|
|
|
3014 NC_002945.4 2776567 . N . . . . GT ./.
|
|
|
3015 NC_002945.4 2776568 . N . . . . GT ./.
|
|
|
3016 NC_002945.4 2776569 . N . . . . GT ./.
|
|
|
3017 NC_002945.4 2776570 . N . . . . GT ./.
|
|
|
3018 NC_002945.4 2776571 . N . . . . GT ./.
|
|
|
3019 NC_002945.4 2776572 . N . . . . GT ./.
|
|
|
3020 NC_002945.4 2776573 . N . . . . GT ./.
|
|
|
3021 NC_002945.4 2776874 . N . . . . GT ./.
|
|
|
3022 NC_002945.4 2776875 . N . . . . GT ./.
|
|
|
3023 NC_002945.4 2776876 . N . . . . GT ./.
|
|
|
3024 NC_002945.4 2776877 . N . . . . GT ./.
|
|
|
3025 NC_002945.4 2776878 . N . . . . GT ./.
|
|
|
3026 NC_002945.4 2776879 . N . . . . GT ./.
|
|
|
3027 NC_002945.4 2776880 . N . . . . GT ./.
|
|
|
3028 NC_002945.4 2776881 . N . . . . GT ./.
|
|
|
3029 NC_002945.4 2776882 . N . . . . GT ./.
|
|
|
3030 NC_002945.4 2776883 . N . . . . GT ./.
|
|
|
3031 NC_002945.4 2776884 . N . . . . GT ./.
|
|
|
3032 NC_002945.4 2776885 . N . . . . GT ./.
|
|
|
3033 NC_002945.4 2776886 . N . . . . GT ./.
|
|
|
3034 NC_002945.4 2776887 . N . . . . GT ./.
|
|
|
3035 NC_002945.4 2776888 . N . . . . GT ./.
|
|
|
3036 NC_002945.4 2776889 . N . . . . GT ./.
|
|
|
3037 NC_002945.4 2776890 . N . . . . GT ./.
|
|
|
3038 NC_002945.4 2776891 . N . . . . GT ./.
|
|
|
3039 NC_002945.4 2776892 . N . . . . GT ./.
|
|
|
3040 NC_002945.4 2776893 . N . . . . GT ./.
|
|
|
3041 NC_002945.4 2776894 . N . . . . GT ./.
|
|
|
3042 NC_002945.4 2776895 . N . . . . GT ./.
|
|
|
3043 NC_002945.4 2776896 . N . . . . GT ./.
|
|
|
3044 NC_002945.4 2776897 . N . . . . GT ./.
|
|
|
3045 NC_002945.4 2776898 . N . . . . GT ./.
|
|
|
3046 NC_002945.4 2776899 . N . . . . GT ./.
|
|
|
3047 NC_002945.4 2776900 . N . . . . GT ./.
|
|
|
3048 NC_002945.4 2776901 . N . . . . GT ./.
|
|
|
3049 NC_002945.4 2776902 . N . . . . GT ./.
|
|
|
3050 NC_002945.4 2776903 . N . . . . GT ./.
|
|
|
3051 NC_002945.4 2776904 . N . . . . GT ./.
|
|
|
3052 NC_002945.4 2776905 . N . . . . GT ./.
|
|
|
3053 NC_002945.4 2776906 . N . . . . GT ./.
|
|
|
3054 NC_002945.4 2776907 . N . . . . GT ./.
|
|
|
3055 NC_002945.4 2776908 . N . . . . GT ./.
|
|
|
3056 NC_002945.4 2806603 . T C 6066.77 . AC=2;AF=1.00;AN=2;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,197:197:99:6095,589,0
|
|
|
3057 NC_002945.4 2823105 . G C 7946.77 . AC=2;AF=1.00;AN=2;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.55;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,230:230:99:7975,690,0
|
|
|
3058 NC_002945.4 2824095 . C G 5152.77 . AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.81;SOR=0.879 GT:AD:DP:GQ:PL 1/1:0,162:162:99:5181,482,0
|
|
|
3059 NC_002945.4 2838052 . T C 7623.77 . AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.98;QD=32.17;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,237:237:99:7652,711,0
|
|
|
3060 NC_002945.4 2852079 . N . . . . GT ./.
|
|
|
3061 NC_002945.4 2852080 . N . . . . GT ./.
|
|
|
3062 NC_002945.4 2852081 . N . . . . GT ./.
|
|
|
3063 NC_002945.4 2852082 . N . . . . GT ./.
|
|
|
3064 NC_002945.4 2852083 . N . . . . GT ./.
|
|
|
3065 NC_002945.4 2852084 . N . . . . GT ./.
|
|
|
3066 NC_002945.4 2852085 . N . . . . GT ./.
|
|
|
3067 NC_002945.4 2852086 . N . . . . GT ./.
|
|
|
3068 NC_002945.4 2852087 . N . . . . GT ./.
|
|
|
3069 NC_002945.4 2852088 . N . . . . GT ./.
|
|
|
3070 NC_002945.4 2852089 . N . . . . GT ./.
|
|
|
3071 NC_002945.4 2852090 . N . . . . GT ./.
|
|
|
3072 NC_002945.4 2852091 . N . . . . GT ./.
|
|
|
3073 NC_002945.4 2852092 . N . . . . GT ./.
|
|
|
3074 NC_002945.4 2852093 . N . . . . GT ./.
|
|
|
3075 NC_002945.4 2852094 . N . . . . GT ./.
|
|
|
3076 NC_002945.4 2852095 . N . . . . GT ./.
|
|
|
3077 NC_002945.4 2852096 . N . . . . GT ./.
|
|
|
3078 NC_002945.4 2852097 . N . . . . GT ./.
|
|
|
3079 NC_002945.4 2852098 . N . . . . GT ./.
|
|
|
3080 NC_002945.4 2852099 . N . . . . GT ./.
|
|
|
3081 NC_002945.4 2852100 . N . . . . GT ./.
|
|
|
3082 NC_002945.4 2852101 . N . . . . GT ./.
|
|
|
3083 NC_002945.4 2852102 . N . . . . GT ./.
|
|
|
3084 NC_002945.4 2852103 . N . . . . GT ./.
|
|
|
3085 NC_002945.4 2852104 . N . . . . GT ./.
|
|
|
3086 NC_002945.4 2852105 . N . . . . GT ./.
|
|
|
3087 NC_002945.4 2870624 . T C 6602.77 . AC=2;AF=1.00;AN=2;DP=198;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,198:198:99:6631,592,0
|
|
|
3088 NC_002945.4 2886118 . C T 5199.77 . AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.41;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,183:183:99:5228,545,0
|
|
|
3089 NC_002945.4 2886902 . T C 6525.77 . AC=2;AF=1.00;AN=2;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,213:213:99:6554,634,0
|
|
|
3090 NC_002945.4 2894601 . G A 1356.77 . AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.67;SOR=1.262 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1385,157,0
|
|
|
3091 NC_002945.4 2924775 . A G 6927.77 . AC=2;AF=1.00;AN=2;DP=217;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,217:217:99:6956,651,0
|
|
|
3092 NC_002945.4 2933602 . N . . . . GT ./.
|
|
|
3093 NC_002945.4 2933603 . N . . . . GT ./.
|
|
|
3094 NC_002945.4 2933604 . N . . . . GT ./.
|
|
|
3095 NC_002945.4 2933605 . N . . . . GT ./.
|
|
|
3096 NC_002945.4 2933606 . N . . . . GT ./.
|
|
|
3097 NC_002945.4 2933607 . N . . . . GT ./.
|
|
|
3098 NC_002945.4 2933608 . N . . . . GT ./.
|
|
|
3099 NC_002945.4 2933609 . N . . . . GT ./.
|
|
|
3100 NC_002945.4 2933610 . N . . . . GT ./.
|
|
|
3101 NC_002945.4 2933611 . N . . . . GT ./.
|
|
|
3102 NC_002945.4 2933612 . N . . . . GT ./.
|
|
|
3103 NC_002945.4 2933613 . N . . . . GT ./.
|
|
|
3104 NC_002945.4 2933614 . N . . . . GT ./.
|
|
|
3105 NC_002945.4 2933615 . N . . . . GT ./.
|
|
|
3106 NC_002945.4 2933616 . N . . . . GT ./.
|
|
|
3107 NC_002945.4 2933617 . N . . . . GT ./.
|
|
|
3108 NC_002945.4 2933618 . N . . . . GT ./.
|
|
|
3109 NC_002945.4 2933619 . N . . . . GT ./.
|
|
|
3110 NC_002945.4 2933620 . N . . . . GT ./.
|
|
|
3111 NC_002945.4 2933621 . N . . . . GT ./.
|
|
|
3112 NC_002945.4 2933622 . N . . . . GT ./.
|
|
|
3113 NC_002945.4 2933623 . N . . . . GT ./.
|
|
|
3114 NC_002945.4 2933624 . N . . . . GT ./.
|
|
|
3115 NC_002945.4 2933625 . N . . . . GT ./.
|
|
|
3116 NC_002945.4 2933626 . N . . . . GT ./.
|
|
|
3117 NC_002945.4 2933627 . N . . . . GT ./.
|
|
|
3118 NC_002945.4 2933628 . N . . . . GT ./.
|
|
|
3119 NC_002945.4 2933629 . N . . . . GT ./.
|
|
|
3120 NC_002945.4 2933630 . N . . . . GT ./.
|
|
|
3121 NC_002945.4 2933631 . N . . . . GT ./.
|
|
|
3122 NC_002945.4 2933632 . N . . . . GT ./.
|
|
|
3123 NC_002945.4 2933633 . N . . . . GT ./.
|
|
|
3124 NC_002945.4 2933634 . N . . . . GT ./.
|
|
|
3125 NC_002945.4 2933635 . N . . . . GT ./.
|
|
|
3126 NC_002945.4 2933636 . N . . . . GT ./.
|
|
|
3127 NC_002945.4 2933637 . N . . . . GT ./.
|
|
|
3128 NC_002945.4 2933638 . N . . . . GT ./.
|
|
|
3129 NC_002945.4 2933639 . N . . . . GT ./.
|
|
|
3130 NC_002945.4 2933640 . N . . . . GT ./.
|
|
|
3131 NC_002945.4 2933641 . N . . . . GT ./.
|
|
|
3132 NC_002945.4 2933642 . N . . . . GT ./.
|
|
|
3133 NC_002945.4 2933643 . N . . . . GT ./.
|
|
|
3134 NC_002945.4 2933644 . N . . . . GT ./.
|
|
|
3135 NC_002945.4 2933645 . N . . . . GT ./.
|
|
|
3136 NC_002945.4 2933646 . N . . . . GT ./.
|
|
|
3137 NC_002945.4 2933647 . N . . . . GT ./.
|
|
|
3138 NC_002945.4 2933648 . N . . . . GT ./.
|
|
|
3139 NC_002945.4 2933649 . N . . . . GT ./.
|
|
|
3140 NC_002945.4 2933650 . N . . . . GT ./.
|
|
|
3141 NC_002945.4 2933651 . N . . . . GT ./.
|
|
|
3142 NC_002945.4 2933652 . N . . . . GT ./.
|
|
|
3143 NC_002945.4 2933653 . N . . . . GT ./.
|
|
|
3144 NC_002945.4 2933654 . N . . . . GT ./.
|
|
|
3145 NC_002945.4 2933655 . N . . . . GT ./.
|
|
|
3146 NC_002945.4 2933656 . N . . . . GT ./.
|
|
|
3147 NC_002945.4 2933657 . N . . . . GT ./.
|
|
|
3148 NC_002945.4 2933658 . N . . . . GT ./.
|
|
|
3149 NC_002945.4 2933659 . N . . . . GT ./.
|
|
|
3150 NC_002945.4 2933660 . N . . . . GT ./.
|
|
|
3151 NC_002945.4 2933661 . N . . . . GT ./.
|
|
|
3152 NC_002945.4 2933662 . N . . . . GT ./.
|
|
|
3153 NC_002945.4 2933663 . N . . . . GT ./.
|
|
|
3154 NC_002945.4 2933664 . N . . . . GT ./.
|
|
|
3155 NC_002945.4 2933665 . N . . . . GT ./.
|
|
|
3156 NC_002945.4 2933666 . N . . . . GT ./.
|
|
|
3157 NC_002945.4 2933667 . N . . . . GT ./.
|
|
|
3158 NC_002945.4 2933668 . N . . . . GT ./.
|
|
|
3159 NC_002945.4 2933669 . N . . . . GT ./.
|
|
|
3160 NC_002945.4 2933670 . N . . . . GT ./.
|
|
|
3161 NC_002945.4 2933671 . N . . . . GT ./.
|
|
|
3162 NC_002945.4 2933672 . N . . . . GT ./.
|
|
|
3163 NC_002945.4 2933673 . N . . . . GT ./.
|
|
|
3164 NC_002945.4 2933674 . N . . . . GT ./.
|
|
|
3165 NC_002945.4 2933675 . N . . . . GT ./.
|
|
|
3166 NC_002945.4 2933676 . N . . . . GT ./.
|
|
|
3167 NC_002945.4 2933677 . N . . . . GT ./.
|
|
|
3168 NC_002945.4 2933678 . N . . . . GT ./.
|
|
|
3169 NC_002945.4 2933679 . N . . . . GT ./.
|
|
|
3170 NC_002945.4 2933680 . N . . . . GT ./.
|
|
|
3171 NC_002945.4 2933681 . N . . . . GT ./.
|
|
|
3172 NC_002945.4 2933682 . N . . . . GT ./.
|
|
|
3173 NC_002945.4 2933683 . N . . . . GT ./.
|
|
|
3174 NC_002945.4 2933684 . N . . . . GT ./.
|
|
|
3175 NC_002945.4 2933685 . N . . . . GT ./.
|
|
|
3176 NC_002945.4 2933686 . N . . . . GT ./.
|
|
|
3177 NC_002945.4 2933687 . N . . . . GT ./.
|
|
|
3178 NC_002945.4 2933688 . N . . . . GT ./.
|
|
|
3179 NC_002945.4 2933689 . N . . . . GT ./.
|
|
|
3180 NC_002945.4 2933690 . N . . . . GT ./.
|
|
|
3181 NC_002945.4 2933691 . N . . . . GT ./.
|
|
|
3182 NC_002945.4 2933692 . N . . . . GT ./.
|
|
|
3183 NC_002945.4 2933693 . N . . . . GT ./.
|
|
|
3184 NC_002945.4 2933694 . N . . . . GT ./.
|
|
|
3185 NC_002945.4 2933695 . N . . . . GT ./.
|
|
|
3186 NC_002945.4 2933696 . N . . . . GT ./.
|
|
|
3187 NC_002945.4 2933697 . N . . . . GT ./.
|
|
|
3188 NC_002945.4 2933698 . N . . . . GT ./.
|
|
|
3189 NC_002945.4 2933699 . N . . . . GT ./.
|
|
|
3190 NC_002945.4 2933700 . N . . . . GT ./.
|
|
|
3191 NC_002945.4 2933701 . N . . . . GT ./.
|
|
|
3192 NC_002945.4 2933702 . N . . . . GT ./.
|
|
|
3193 NC_002945.4 2933703 . N . . . . GT ./.
|
|
|
3194 NC_002945.4 2933704 . N . . . . GT ./.
|
|
|
3195 NC_002945.4 2933705 . N . . . . GT ./.
|
|
|
3196 NC_002945.4 2933706 . N . . . . GT ./.
|
|
|
3197 NC_002945.4 2933707 . N . . . . GT ./.
|
|
|
3198 NC_002945.4 2933708 . N . . . . GT ./.
|
|
|
3199 NC_002945.4 2933709 . N . . . . GT ./.
|
|
|
3200 NC_002945.4 2933710 . N . . . . GT ./.
|
|
|
3201 NC_002945.4 2933711 . N . . . . GT ./.
|
|
|
3202 NC_002945.4 2933712 . N . . . . GT ./.
|
|
|
3203 NC_002945.4 2933713 . N . . . . GT ./.
|
|
|
3204 NC_002945.4 2933714 . N . . . . GT ./.
|
|
|
3205 NC_002945.4 2933715 . N . . . . GT ./.
|
|
|
3206 NC_002945.4 2933716 . N . . . . GT ./.
|
|
|
3207 NC_002945.4 2933717 . N . . . . GT ./.
|
|
|
3208 NC_002945.4 2933718 . N . . . . GT ./.
|
|
|
3209 NC_002945.4 2933719 . N . . . . GT ./.
|
|
|
3210 NC_002945.4 2933720 . N . . . . GT ./.
|
|
|
3211 NC_002945.4 2933721 . N . . . . GT ./.
|
|
|
3212 NC_002945.4 2933722 . N . . . . GT ./.
|
|
|
3213 NC_002945.4 2933723 . N . . . . GT ./.
|
|
|
3214 NC_002945.4 2933724 . N . . . . GT ./.
|
|
|
3215 NC_002945.4 2933725 . N . . . . GT ./.
|
|
|
3216 NC_002945.4 2933726 . N . . . . GT ./.
|
|
|
3217 NC_002945.4 2933727 . N . . . . GT ./.
|
|
|
3218 NC_002945.4 2933728 . N . . . . GT ./.
|
|
|
3219 NC_002945.4 2933729 . N . . . . GT ./.
|
|
|
3220 NC_002945.4 2933730 . N . . . . GT ./.
|
|
|
3221 NC_002945.4 2933731 . N . . . . GT ./.
|
|
|
3222 NC_002945.4 2933732 . N . . . . GT ./.
|
|
|
3223 NC_002945.4 2933733 . N . . . . GT ./.
|
|
|
3224 NC_002945.4 2933734 . N . . . . GT ./.
|
|
|
3225 NC_002945.4 2933735 . N . . . . GT ./.
|
|
|
3226 NC_002945.4 2933736 . N . . . . GT ./.
|
|
|
3227 NC_002945.4 2933737 . N . . . . GT ./.
|
|
|
3228 NC_002945.4 2933738 . N . . . . GT ./.
|
|
|
3229 NC_002945.4 2933739 . N . . . . GT ./.
|
|
|
3230 NC_002945.4 2933740 . N . . . . GT ./.
|
|
|
3231 NC_002945.4 2933741 . N . . . . GT ./.
|
|
|
3232 NC_002945.4 2933742 . N . . . . GT ./.
|
|
|
3233 NC_002945.4 2933743 . N . . . . GT ./.
|
|
|
3234 NC_002945.4 2933744 . N . . . . GT ./.
|
|
|
3235 NC_002945.4 2933745 . N . . . . GT ./.
|
|
|
3236 NC_002945.4 2933746 . N . . . . GT ./.
|
|
|
3237 NC_002945.4 2933747 . N . . . . GT ./.
|
|
|
3238 NC_002945.4 2933748 . N . . . . GT ./.
|
|
|
3239 NC_002945.4 2933749 . N . . . . GT ./.
|
|
|
3240 NC_002945.4 2933750 . N . . . . GT ./.
|
|
|
3241 NC_002945.4 2933751 . N . . . . GT ./.
|
|
|
3242 NC_002945.4 2933752 . N . . . . GT ./.
|
|
|
3243 NC_002945.4 2933753 . N . . . . GT ./.
|
|
|
3244 NC_002945.4 2933754 . N . . . . GT ./.
|
|
|
3245 NC_002945.4 2933755 . N . . . . GT ./.
|
|
|
3246 NC_002945.4 2933756 . N . . . . GT ./.
|
|
|
3247 NC_002945.4 2933757 . N . . . . GT ./.
|
|
|
3248 NC_002945.4 2933758 . N . . . . GT ./.
|
|
|
3249 NC_002945.4 2933759 . N . . . . GT ./.
|
|
|
3250 NC_002945.4 2933760 . N . . . . GT ./.
|
|
|
3251 NC_002945.4 2933761 . N . . . . GT ./.
|
|
|
3252 NC_002945.4 2933762 . N . . . . GT ./.
|
|
|
3253 NC_002945.4 2933763 . N . . . . GT ./.
|
|
|
3254 NC_002945.4 2933764 . N . . . . GT ./.
|
|
|
3255 NC_002945.4 2933765 . N . . . . GT ./.
|
|
|
3256 NC_002945.4 2933766 . N . . . . GT ./.
|
|
|
3257 NC_002945.4 2933767 . N . . . . GT ./.
|
|
|
3258 NC_002945.4 2942926 . A G 8305.77 . AC=2;AF=1.00;AN=2;DP=264;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.46;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,264:264:99:8334,787,0
|
|
|
3259 NC_002945.4 2947196 . G A 8251.77 . AC=2;AF=1.00;AN=2;DP=273;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.23;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,273:273:99:8280,816,0
|
|
|
3260 NC_002945.4 2964207 . T G 7031.77 . AC=2;AF=1.00;AN=2;DP=216;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.55;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,216:216:99:7060,645,0
|
|
|
3261 NC_002945.4 2979719 . C A 7366.77 . AC=2;AF=1.00;AN=2;DP=247;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,247:247:99:7395,738,0
|
|
|
3262 NC_002945.4 2984156 . T G 9334.77 . AC=2;AF=1.00;AN=2;DP=292;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.97;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,292:292:99:9363,873,0
|
|
|
3263 NC_002945.4 2997998 . C T 7073.77 . AC=2;AF=1.00;AN=2;DP=227;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.16;SOR=1.002 GT:AD:DP:GQ:PL 1/1:0,227:227:99:7102,677,0
|
|
|
3264 NC_002945.4 3018593 . G T 6636.77 . AC=2;AF=1.00;AN=2;DP=210;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=1.146 GT:AD:DP:GQ:PL 1/1:0,210:210:99:6665,629,0
|
|
|
3265 NC_002945.4 3036490 . C G 5538.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.053;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.29;ReadPosRankSum=2.739;SOR=0.877 GT:AD:DP:GQ:PL 1/1:2,175:177:99:5567,436,0
|
|
|
3266 NC_002945.4 3037620 . C G 7253.77 . AC=2;AF=1.00;AN=2;DP=222;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,222:222:99:7282,663,0
|
|
|
3267 NC_002945.4 3040820 . A G 5882.77 . AC=2;AF=1.00;AN=2;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.32;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,182:182:99:5911,545,0
|
|
|
3268 NC_002945.4 3042914 . T A 9212.77 . AC=2;AF=1.00;AN=2;DP=301;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.61;SOR=0.700 GT:AD:DP:GQ:PL 1/1:0,301:301:99:9241,898,0
|
|
|
3269 NC_002945.4 3053649 . G A 7921.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.835;ClippingRankSum=0.000;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.07;ReadPosRankSum=-0.474;SOR=0.264 GT:AD:DP:GQ:PL 1/1:1,254:255:99:7950,752,0
|
|
|
3270 NC_002945.4 3063074 . A G 7073.77 . AC=2;AF=1.00;AN=2;DP=222;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.86;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,222:222:99:7102,665,0
|
|
|
3271 NC_002945.4 3065929 . A C 4582.77 . AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4611,410,0
|
|
|
3272 NC_002945.4 3068041 . A G 5494.77 . AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.86;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,184:184:99:5523,546,0
|
|
|
3273 NC_002945.4 3070642 . C T 3258.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.445;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=17.614;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.64;ReadPosRankSum=2.691;SOR=3.872 GT:AD:DP:GQ:PL 1/1:2,101:103:99:3287,285,0
|
|
|
3274 NC_002945.4 3078744 . G A 2791.77 . AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.02;SOR=0.953 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2820,277,0
|
|
|
3275 NC_002945.4 3080843 . T C 3707.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.719;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=7.002;MLEAC=2;MLEAF=1.00;MQ=59.51;MQRankSum=2.888;QD=26.11;ReadPosRankSum=0.376;SOR=0.325 GT:AD:DP:GQ:PL 1/1:5,137:142:99:3736,334,0
|
|
|
3276 NC_002945.4 3083596 . N . . . . GT ./.
|
|
|
3277 NC_002945.4 3083597 . N . . . . GT ./.
|
|
|
3278 NC_002945.4 3083598 . N . . . . GT ./.
|
|
|
3279 NC_002945.4 3083599 . N . . . . GT ./.
|
|
|
3280 NC_002945.4 3083600 . N . . . . GT ./.
|
|
|
3281 NC_002945.4 3083601 . N . . . . GT ./.
|
|
|
3282 NC_002945.4 3083602 . N . . . . GT ./.
|
|
|
3283 NC_002945.4 3083603 . N . . . . GT ./.
|
|
|
3284 NC_002945.4 3083604 . N . . . . GT ./.
|
|
|
3285 NC_002945.4 3083605 . N . . . . GT ./.
|
|
|
3286 NC_002945.4 3083606 . N . . . . GT ./.
|
|
|
3287 NC_002945.4 3083607 . N . . . . GT ./.
|
|
|
3288 NC_002945.4 3083608 . N . . . . GT ./.
|
|
|
3289 NC_002945.4 3083609 . N . . . . GT ./.
|
|
|
3290 NC_002945.4 3083610 . N . . . . GT ./.
|
|
|
3291 NC_002945.4 3083611 . N . . . . GT ./.
|
|
|
3292 NC_002945.4 3083612 . N . . . . GT ./.
|
|
|
3293 NC_002945.4 3083613 . N . . . . GT ./.
|
|
|
3294 NC_002945.4 3083614 . N . . . . GT ./.
|
|
|
3295 NC_002945.4 3083615 . N . . . . GT ./.
|
|
|
3296 NC_002945.4 3083616 . N . . . . GT ./.
|
|
|
3297 NC_002945.4 3083617 . N . . . . GT ./.
|
|
|
3298 NC_002945.4 3083618 . N . . . . GT ./.
|
|
|
3299 NC_002945.4 3083619 . N . . . . GT ./.
|
|
|
3300 NC_002945.4 3083620 . N . . . . GT ./.
|
|
|
3301 NC_002945.4 3083621 . N . . . . GT ./.
|
|
|
3302 NC_002945.4 3083622 . N . . . . GT ./.
|
|
|
3303 NC_002945.4 3083623 . N . . . . GT ./.
|
|
|
3304 NC_002945.4 3083624 . N . . . . GT ./.
|
|
|
3305 NC_002945.4 3083625 . N . . . . GT ./.
|
|
|
3306 NC_002945.4 3083626 . N . . . . GT ./.
|
|
|
3307 NC_002945.4 3083627 . N . . . . GT ./.
|
|
|
3308 NC_002945.4 3083628 . N . . . . GT ./.
|
|
|
3309 NC_002945.4 3083629 . N . . . . GT ./.
|
|
|
3310 NC_002945.4 3083630 . N . . . . GT ./.
|
|
|
3311 NC_002945.4 3083631 . N . . . . GT ./.
|
|
|
3312 NC_002945.4 3083632 . N . . . . GT ./.
|
|
|
3313 NC_002945.4 3098932 . T C 4845.77 . AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.65;SOR=1.079 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4874,430,0
|
|
|
3314 NC_002945.4 3100639 . G C 4164.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.775;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=4.106;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.96;ReadPosRankSum=3.022;SOR=1.025 GT:AD:DP:GQ:PL 1/1:1,138:139:99:4193,400,0
|
|
|
3315 NC_002945.4 3103354 . T C 4829.77 . AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.19;SOR=1.068 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4858,477,0
|
|
|
3316 NC_002945.4 3116911 . N . . . . GT ./.
|
|
|
3317 NC_002945.4 3116912 . N . . . . GT ./.
|
|
|
3318 NC_002945.4 3116913 . N . . . . GT ./.
|
|
|
3319 NC_002945.4 3116914 . N . . . . GT ./.
|
|
|
3320 NC_002945.4 3116915 . N . . . . GT ./.
|
|
|
3321 NC_002945.4 3116916 . N . . . . GT ./.
|
|
|
3322 NC_002945.4 3116917 . N . . . . GT ./.
|
|
|
3323 NC_002945.4 3116918 . N . . . . GT ./.
|
|
|
3324 NC_002945.4 3116919 . N . . . . GT ./.
|
|
|
3325 NC_002945.4 3116920 . N . . . . GT ./.
|
|
|
3326 NC_002945.4 3116921 . N . . . . GT ./.
|
|
|
3327 NC_002945.4 3116922 . N . . . . GT ./.
|
|
|
3328 NC_002945.4 3116923 . N . . . . GT ./.
|
|
|
3329 NC_002945.4 3116924 . N . . . . GT ./.
|
|
|
3330 NC_002945.4 3116925 . N . . . . GT ./.
|
|
|
3331 NC_002945.4 3116926 . N . . . . GT ./.
|
|
|
3332 NC_002945.4 3116927 . N . . . . GT ./.
|
|
|
3333 NC_002945.4 3116928 . N . . . . GT ./.
|
|
|
3334 NC_002945.4 3116929 . N . . . . GT ./.
|
|
|
3335 NC_002945.4 3116930 . N . . . . GT ./.
|
|
|
3336 NC_002945.4 3116931 . N . . . . GT ./.
|
|
|
3337 NC_002945.4 3116932 . N . . . . GT ./.
|
|
|
3338 NC_002945.4 3116933 . N . . . . GT ./.
|
|
|
3339 NC_002945.4 3116934 . N . . . . GT ./.
|
|
|
3340 NC_002945.4 3116935 . N . . . . GT ./.
|
|
|
3341 NC_002945.4 3116936 . N . . . . GT ./.
|
|
|
3342 NC_002945.4 3116937 . N . . . . GT ./.
|
|
|
3343 NC_002945.4 3116938 . N . . . . GT ./.
|
|
|
3344 NC_002945.4 3116939 . N . . . . GT ./.
|
|
|
3345 NC_002945.4 3116940 . N . . . . GT ./.
|
|
|
3346 NC_002945.4 3116941 . N . . . . GT ./.
|
|
|
3347 NC_002945.4 3116942 . N . . . . GT ./.
|
|
|
3348 NC_002945.4 3116943 . N . . . . GT ./.
|
|
|
3349 NC_002945.4 3116944 . N . . . . GT ./.
|
|
|
3350 NC_002945.4 3116945 . N . . . . GT ./.
|
|
|
3351 NC_002945.4 3116946 . N . . . . GT ./.
|
|
|
3352 NC_002945.4 3116947 . N . . . . GT ./.
|
|
|
3353 NC_002945.4 3116948 . N . . . . GT ./.
|
|
|
3354 NC_002945.4 3116949 . N . . . . GT ./.
|
|
|
3355 NC_002945.4 3116950 . N . . . . GT ./.
|
|
|
3356 NC_002945.4 3116951 . N . . . . GT ./.
|
|
|
3357 NC_002945.4 3116952 . N . . . . GT ./.
|
|
|
3358 NC_002945.4 3116953 . N . . . . GT ./.
|
|
|
3359 NC_002945.4 3116954 . N . . . . GT ./.
|
|
|
3360 NC_002945.4 3116955 . N . . . . GT ./.
|
|
|
3361 NC_002945.4 3116956 . N . . . . GT ./.
|
|
|
3362 NC_002945.4 3116957 . N . . . . GT ./.
|
|
|
3363 NC_002945.4 3116958 . N . . . . GT ./.
|
|
|
3364 NC_002945.4 3116959 . N . . . . GT ./.
|
|
|
3365 NC_002945.4 3116960 . N . . . . GT ./.
|
|
|
3366 NC_002945.4 3116961 . N . . . . GT ./.
|
|
|
3367 NC_002945.4 3116962 . N . . . . GT ./.
|
|
|
3368 NC_002945.4 3116963 . N . . . . GT ./.
|
|
|
3369 NC_002945.4 3116964 . N . . . . GT ./.
|
|
|
3370 NC_002945.4 3116965 . N . . . . GT ./.
|
|
|
3371 NC_002945.4 3116966 . N . . . . GT ./.
|
|
|
3372 NC_002945.4 3116967 . N . . . . GT ./.
|
|
|
3373 NC_002945.4 3116968 . N . . . . GT ./.
|
|
|
3374 NC_002945.4 3116969 . N . . . . GT ./.
|
|
|
3375 NC_002945.4 3137471 . A G 5710.77 . AC=2;AF=1.00;AN=2;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.70;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,186:186:99:5739,556,0
|
|
|
3376 NC_002945.4 3140342 . G T 8637.77 . AC=2;AF=1.00;AN=2;DP=286;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.20;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,286:286:99:8666,856,0
|
|
|
3377 NC_002945.4 3154140 . T C 8524.77 . AC=2;AF=1.00;AN=2;DP=257;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,257:257:99:8553,768,0
|
|
|
3378 NC_002945.4 3159182 . G A 5990.77 . AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.72;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6019,583,0
|
|
|
3379 NC_002945.4 3173568 . T C 7217.77 . AC=2;AF=1.00;AN=2;DP=216;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,216:216:99:7246,645,0
|
|
|
3380 NC_002945.4 3193460 . G T 10996.77 . AC=2;AF=1.00;AN=2;DP=248;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.71;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:248:99:11025,746,0
|
|
|
3381 NC_002945.4 3193461 . G T 10996.77 . AC=2;AF=1.00;AN=2;DP=248;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,248:248:99:11025,746,0
|
|
|
3382 NC_002945.4 3193631 . A G 4188.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.933;ClippingRankSum=0.000;DP=227;ExcessHet=3.0103;FS=14.667;MLEAC=1;MLEAF=0.500;MQ=55.39;MQRankSum=11.414;QD=18.45;ReadPosRankSum=9.382;SOR=0.234 GT:AD:DP:GQ:PL 0/1:63,164:227:99:4217,0,1142
|
|
|
3383 NC_002945.4 3203316 . T C 8060.77 . AC=2;AF=1.00;AN=2;DP=262;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.88;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,261:261:99:8089,781,0
|
|
|
3384 NC_002945.4 3211854 . T C 6396.77 . AC=2;AF=1.00;AN=2;DP=199;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,199:199:99:6425,595,0
|
|
|
3385 NC_002945.4 3219348 . N . . . . GT ./.
|
|
|
3386 NC_002945.4 3219349 . N . . . . GT ./.
|
|
|
3387 NC_002945.4 3219350 . N . . . . GT ./.
|
|
|
3388 NC_002945.4 3219351 . N . . . . GT ./.
|
|
|
3389 NC_002945.4 3219352 . N . . . . GT ./.
|
|
|
3390 NC_002945.4 3219353 . N . . . . GT ./.
|
|
|
3391 NC_002945.4 3219354 . N . . . . GT ./.
|
|
|
3392 NC_002945.4 3219355 . N . . . . GT ./.
|
|
|
3393 NC_002945.4 3219356 . N . . . . GT ./.
|
|
|
3394 NC_002945.4 3219357 . N . . . . GT ./.
|
|
|
3395 NC_002945.4 3230333 . G A 3911.77 . AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3940,360,0
|
|
|
3396 NC_002945.4 3247623 . C T 6555.77 . AC=2;AF=1.00;AN=2;DP=224;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.27;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,224:224:99:6584,668,0
|
|
|
3397 NC_002945.4 3267690 . A G 7031.77 . AC=2;AF=1.00;AN=2;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.47;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,204:204:99:7060,611,0
|
|
|
3398 NC_002945.4 3270181 . A G 6549.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.027;ClippingRankSum=0.000;DP=226;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.98;ReadPosRankSum=1.081;SOR=0.227 GT:AD:DP:GQ:PL 1/1:1,225:226:99:6578,664,0
|
|
|
3399 NC_002945.4 3282696 . G A 7559.77 . AC=2;AF=1.00;AN=2;DP=245;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.86;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,245:245:99:7588,731,0
|
|
|
3400 NC_002945.4 3288444 . G A 10110.77 . AC=2;AF=1.00;AN=2;DP=330;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=0.891 GT:AD:DP:GQ:PL 1/1:0,330:330:99:10139,988,0
|
|
|
3401 NC_002945.4 3297745 . A T 760.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=4.133;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=9.242;MLEAC=1;MLEAF=0.500;MQ=57.06;MQRankSum=-1.634;QD=5.76;ReadPosRankSum=-5.771;SOR=0.134 GT:AD:DP:GQ:PL 0/1:96,36:132:99:789,0,2820
|
|
|
3402 NC_002945.4 3329772 . C G 6812.77 . AC=2;AF=1.00;AN=2;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.89;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,201:201:99:6841,603,0
|
|
|
3403 NC_002945.4 3338298 . C G 2647.77 . AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.04;QD=27.02;SOR=1.298 GT:AD:DP:GQ:PL 1/1:0,98:98:99:2676,292,0
|
|
|
3404 NC_002945.4 3371156 . A G 8443.77 . AC=2;AF=1.00;AN=2;DP=273;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,272:272:99:8472,814,0
|
|
|
3405 NC_002945.4 3394764 . A G 8067.77 . AC=2;AF=1.00;AN=2;DP=259;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,259:259:99:8096,775,0
|
|
|
3406 NC_002945.4 3396621 . G C 6856.77 . AC=2;AF=1.00;AN=2;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,230:230:99:6885,686,0
|
|
|
3407 NC_002945.4 3399301 . G T 1913.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-2.515;ClippingRankSum=0.000;DP=251;ExcessHet=3.0103;FS=7.254;MLEAC=1;MLEAF=0.500;MQ=60.04;MQRankSum=-0.726;QD=7.62;ReadPosRankSum=-0.847;SOR=1.030 GT:AD:DP:GQ:PL 0/1:163,88:251:99:1942,0,4580
|
|
|
3408 NC_002945.4 3421983 . C T 4201.77 . AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.07;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,131:131:99:4230,391,0
|
|
|
3409 NC_002945.4 3439578 . G A 9231.77 . AC=2;AF=1.00;AN=2;DP=319;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.94;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,319:319:99:9260,950,0
|
|
|
3410 NC_002945.4 3451869 . C A 7294.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.908;ClippingRankSum=0.000;DP=243;ExcessHet=3.0103;FS=3.364;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.02;ReadPosRankSum=0.672;SOR=0.494 GT:AD:DP:GQ:PL 1/1:1,242:243:99:7323,714,0
|
|
|
3411 NC_002945.4 3464524 . T C 3131.77 . AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=1.925 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3160,307,0
|
|
|
3412 NC_002945.4 3471404 . A G 7884.77 . AC=2;AF=1.00;AN=2;DP=249;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,247:247:99:7913,736,0
|
|
|
3413 NC_002945.4 3482644 . A T 6037.77 . AC=2;AF=1.00;AN=2;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.74;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,203:203:99:6066,604,0
|
|
|
3414 NC_002945.4 3484836 . A G 7431.77 . AC=2;AF=1.00;AN=2;DP=243;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.04;QD=30.84;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,241:241:99:7460,718,0
|
|
|
3415 NC_002945.4 3493491 . G A 6916.77 . AC=2;AF=1.00;AN=2;DP=223;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.02;SOR=1.257 GT:AD:DP:GQ:PL 1/1:0,223:223:99:6945,665,0
|
|
|
3416 NC_002945.4 3495510 . C T 6536.77 . AC=2;AF=1.00;AN=2;DP=215;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.40;SOR=0.820 GT:AD:DP:GQ:PL 1/1:0,215:215:99:6565,644,0
|
|
|
3417 NC_002945.4 3574014 . T C 9655.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.904;ClippingRankSum=0.000;DP=325;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.71;ReadPosRankSum=-0.446;SOR=0.249 GT:AD:DP:GQ:PL 1/1:1,324:325:99:9684,960,0
|
|
|
3418 NC_002945.4 3577163 . G T 7821.77 . AC=2;AF=1.00;AN=2;DP=236;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.28;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,235:235:99:7850,701,0
|
|
|
3419 NC_002945.4 3626128 . T C 6306.77 . AC=2;AF=1.00;AN=2;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.38;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,201:201:99:6335,601,0
|
|
|
3420 NC_002945.4 3667823 . A G 8951.77 . AC=2;AF=1.00;AN=2;DP=283;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=0.700 GT:AD:DP:GQ:PL 1/1:0,283:283:99:8980,847,0
|
|
|
3421 NC_002945.4 3695728 . N . . . . GT ./.
|
|
|
3422 NC_002945.4 3695729 . N . . . . GT ./.
|
|
|
3423 NC_002945.4 3695730 . N . . . . GT ./.
|
|
|
3424 NC_002945.4 3695731 . N . . . . GT ./.
|
|
|
3425 NC_002945.4 3695732 . N . . . . GT ./.
|
|
|
3426 NC_002945.4 3695733 . N . . . . GT ./.
|
|
|
3427 NC_002945.4 3695734 . N . . . . GT ./.
|
|
|
3428 NC_002945.4 3695735 . N . . . . GT ./.
|
|
|
3429 NC_002945.4 3695736 . N . . . . GT ./.
|
|
|
3430 NC_002945.4 3695737 . N . . . . GT ./.
|
|
|
3431 NC_002945.4 3695738 . N . . . . GT ./.
|
|
|
3432 NC_002945.4 3695739 . N . . . . GT ./.
|
|
|
3433 NC_002945.4 3695740 . N . . . . GT ./.
|
|
|
3434 NC_002945.4 3695741 . N . . . . GT ./.
|
|
|
3435 NC_002945.4 3695742 . N . . . . GT ./.
|
|
|
3436 NC_002945.4 3695743 . N . . . . GT ./.
|
|
|
3437 NC_002945.4 3695744 . N . . . . GT ./.
|
|
|
3438 NC_002945.4 3695745 . N . . . . GT ./.
|
|
|
3439 NC_002945.4 3695746 . N . . . . GT ./.
|
|
|
3440 NC_002945.4 3695747 . N . . . . GT ./.
|
|
|
3441 NC_002945.4 3695748 . N . . . . GT ./.
|
|
|
3442 NC_002945.4 3695749 . N . . . . GT ./.
|
|
|
3443 NC_002945.4 3695750 . N . . . . GT ./.
|
|
|
3444 NC_002945.4 3695751 . N . . . . GT ./.
|
|
|
3445 NC_002945.4 3695752 . N . . . . GT ./.
|
|
|
3446 NC_002945.4 3695753 . N . . . . GT ./.
|
|
|
3447 NC_002945.4 3695754 . N . . . . GT ./.
|
|
|
3448 NC_002945.4 3695755 . N . . . . GT ./.
|
|
|
3449 NC_002945.4 3695756 . N . . . . GT ./.
|
|
|
3450 NC_002945.4 3695757 . N . . . . GT ./.
|
|
|
3451 NC_002945.4 3695758 . N . . . . GT ./.
|
|
|
3452 NC_002945.4 3695759 . N . . . . GT ./.
|
|
|
3453 NC_002945.4 3695760 . N . . . . GT ./.
|
|
|
3454 NC_002945.4 3695761 . N . . . . GT ./.
|
|
|
3455 NC_002945.4 3695762 . N . . . . GT ./.
|
|
|
3456 NC_002945.4 3695763 . N . . . . GT ./.
|
|
|
3457 NC_002945.4 3695764 . N . . . . GT ./.
|
|
|
3458 NC_002945.4 3695765 . N . . . . GT ./.
|
|
|
3459 NC_002945.4 3695766 . N . . . . GT ./.
|
|
|
3460 NC_002945.4 3695767 . N . . . . GT ./.
|
|
|
3461 NC_002945.4 3695768 . N . . . . GT ./.
|
|
|
3462 NC_002945.4 3695769 . N . . . . GT ./.
|
|
|
3463 NC_002945.4 3695770 . N . . . . GT ./.
|
|
|
3464 NC_002945.4 3695771 . N . . . . GT ./.
|
|
|
3465 NC_002945.4 3695772 . N . . . . GT ./.
|
|
|
3466 NC_002945.4 3695773 . N . . . . GT ./.
|
|
|
3467 NC_002945.4 3695774 . N . . . . GT ./.
|
|
|
3468 NC_002945.4 3695775 . N . . . . GT ./.
|
|
|
3469 NC_002945.4 3695776 . N . . . . GT ./.
|
|
|
3470 NC_002945.4 3695777 . N . . . . GT ./.
|
|
|
3471 NC_002945.4 3695778 . N . . . . GT ./.
|
|
|
3472 NC_002945.4 3695779 . N . . . . GT ./.
|
|
|
3473 NC_002945.4 3695780 . N . . . . GT ./.
|
|
|
3474 NC_002945.4 3695781 . N . . . . GT ./.
|
|
|
3475 NC_002945.4 3695782 . N . . . . GT ./.
|
|
|
3476 NC_002945.4 3695783 . N . . . . GT ./.
|
|
|
3477 NC_002945.4 3695784 . N . . . . GT ./.
|
|
|
3478 NC_002945.4 3695785 . N . . . . GT ./.
|
|
|
3479 NC_002945.4 3695786 . N . . . . GT ./.
|
|
|
3480 NC_002945.4 3695787 . N . . . . GT ./.
|
|
|
3481 NC_002945.4 3695788 . N . . . . GT ./.
|
|
|
3482 NC_002945.4 3695789 . N . . . . GT ./.
|
|
|
3483 NC_002945.4 3695790 . N . . . . GT ./.
|
|
|
3484 NC_002945.4 3695791 . N . . . . GT ./.
|
|
|
3485 NC_002945.4 3695792 . N . . . . GT ./.
|
|
|
3486 NC_002945.4 3695793 . N . . . . GT ./.
|
|
|
3487 NC_002945.4 3695794 . N . . . . GT ./.
|
|
|
3488 NC_002945.4 3695795 . N . . . . GT ./.
|
|
|
3489 NC_002945.4 3695796 . N . . . . GT ./.
|
|
|
3490 NC_002945.4 3695797 . N . . . . GT ./.
|
|
|
3491 NC_002945.4 3695798 . N . . . . GT ./.
|
|
|
3492 NC_002945.4 3695799 . N . . . . GT ./.
|
|
|
3493 NC_002945.4 3695800 . N . . . . GT ./.
|
|
|
3494 NC_002945.4 3695801 . N . . . . GT ./.
|
|
|
3495 NC_002945.4 3695802 . N . . . . GT ./.
|
|
|
3496 NC_002945.4 3695803 . N . . . . GT ./.
|
|
|
3497 NC_002945.4 3695804 . N . . . . GT ./.
|
|
|
3498 NC_002945.4 3695805 . N . . . . GT ./.
|
|
|
3499 NC_002945.4 3695806 . N . . . . GT ./.
|
|
|
3500 NC_002945.4 3695807 . N . . . . GT ./.
|
|
|
3501 NC_002945.4 3695808 . N . . . . GT ./.
|
|
|
3502 NC_002945.4 3695809 . N . . . . GT ./.
|
|
|
3503 NC_002945.4 3695810 . N . . . . GT ./.
|
|
|
3504 NC_002945.4 3695811 . N . . . . GT ./.
|
|
|
3505 NC_002945.4 3695812 . N . . . . GT ./.
|
|
|
3506 NC_002945.4 3695813 . N . . . . GT ./.
|
|
|
3507 NC_002945.4 3695814 . N . . . . GT ./.
|
|
|
3508 NC_002945.4 3695815 . N . . . . GT ./.
|
|
|
3509 NC_002945.4 3695816 . N . . . . GT ./.
|
|
|
3510 NC_002945.4 3695817 . N . . . . GT ./.
|
|
|
3511 NC_002945.4 3695818 . N . . . . GT ./.
|
|
|
3512 NC_002945.4 3695819 . N . . . . GT ./.
|
|
|
3513 NC_002945.4 3695820 . N . . . . GT ./.
|
|
|
3514 NC_002945.4 3695821 . N . . . . GT ./.
|
|
|
3515 NC_002945.4 3695822 . N . . . . GT ./.
|
|
|
3516 NC_002945.4 3695823 . N . . . . GT ./.
|
|
|
3517 NC_002945.4 3695824 . N . . . . GT ./.
|
|
|
3518 NC_002945.4 3695825 . N . . . . GT ./.
|
|
|
3519 NC_002945.4 3695826 . N . . . . GT ./.
|
|
|
3520 NC_002945.4 3695827 . N . . . . GT ./.
|
|
|
3521 NC_002945.4 3695828 . N . . . . GT ./.
|
|
|
3522 NC_002945.4 3695829 . N . . . . GT ./.
|
|
|
3523 NC_002945.4 3695830 . N . . . . GT ./.
|
|
|
3524 NC_002945.4 3695831 . N . . . . GT ./.
|
|
|
3525 NC_002945.4 3695832 . N . . . . GT ./.
|
|
|
3526 NC_002945.4 3695833 . N . . . . GT ./.
|
|
|
3527 NC_002945.4 3695834 . N . . . . GT ./.
|
|
|
3528 NC_002945.4 3695835 . N . . . . GT ./.
|
|
|
3529 NC_002945.4 3695836 . N . . . . GT ./.
|
|
|
3530 NC_002945.4 3695837 . N . . . . GT ./.
|
|
|
3531 NC_002945.4 3695838 . N . . . . GT ./.
|
|
|
3532 NC_002945.4 3695839 . N . . . . GT ./.
|
|
|
3533 NC_002945.4 3695840 . N . . . . GT ./.
|
|
|
3534 NC_002945.4 3695841 . N . . . . GT ./.
|
|
|
3535 NC_002945.4 3695842 . N . . . . GT ./.
|
|
|
3536 NC_002945.4 3695843 . N . . . . GT ./.
|
|
|
3537 NC_002945.4 3695844 . N . . . . GT ./.
|
|
|
3538 NC_002945.4 3695845 . N . . . . GT ./.
|
|
|
3539 NC_002945.4 3695846 . N . . . . GT ./.
|
|
|
3540 NC_002945.4 3695847 . N . . . . GT ./.
|
|
|
3541 NC_002945.4 3695848 . N . . . . GT ./.
|
|
|
3542 NC_002945.4 3695849 . N . . . . GT ./.
|
|
|
3543 NC_002945.4 3695850 . N . . . . GT ./.
|
|
|
3544 NC_002945.4 3695851 . N . . . . GT ./.
|
|
|
3545 NC_002945.4 3695852 . N . . . . GT ./.
|
|
|
3546 NC_002945.4 3695853 . N . . . . GT ./.
|
|
|
3547 NC_002945.4 3695854 . N . . . . GT ./.
|
|
|
3548 NC_002945.4 3695855 . N . . . . GT ./.
|
|
|
3549 NC_002945.4 3695856 . N . . . . GT ./.
|
|
|
3550 NC_002945.4 3695857 . N . . . . GT ./.
|
|
|
3551 NC_002945.4 3695858 . N . . . . GT ./.
|
|
|
3552 NC_002945.4 3695859 . N . . . . GT ./.
|
|
|
3553 NC_002945.4 3695860 . N . . . . GT ./.
|
|
|
3554 NC_002945.4 3695861 . N . . . . GT ./.
|
|
|
3555 NC_002945.4 3695862 . N . . . . GT ./.
|
|
|
3556 NC_002945.4 3695863 . N . . . . GT ./.
|
|
|
3557 NC_002945.4 3695864 . N . . . . GT ./.
|
|
|
3558 NC_002945.4 3695865 . N . . . . GT ./.
|
|
|
3559 NC_002945.4 3695866 . N . . . . GT ./.
|
|
|
3560 NC_002945.4 3695867 . N . . . . GT ./.
|
|
|
3561 NC_002945.4 3695868 . N . . . . GT ./.
|
|
|
3562 NC_002945.4 3695869 . N . . . . GT ./.
|
|
|
3563 NC_002945.4 3695870 . N . . . . GT ./.
|
|
|
3564 NC_002945.4 3695871 . N . . . . GT ./.
|
|
|
3565 NC_002945.4 3695872 . N . . . . GT ./.
|
|
|
3566 NC_002945.4 3695873 . N . . . . GT ./.
|
|
|
3567 NC_002945.4 3695874 . N . . . . GT ./.
|
|
|
3568 NC_002945.4 3695875 . N . . . . GT ./.
|
|
|
3569 NC_002945.4 3695876 . N . . . . GT ./.
|
|
|
3570 NC_002945.4 3695877 . N . . . . GT ./.
|
|
|
3571 NC_002945.4 3695878 . N . . . . GT ./.
|
|
|
3572 NC_002945.4 3695879 . N . . . . GT ./.
|
|
|
3573 NC_002945.4 3695880 . N . . . . GT ./.
|
|
|
3574 NC_002945.4 3695881 . N . . . . GT ./.
|
|
|
3575 NC_002945.4 3695882 . N . . . . GT ./.
|
|
|
3576 NC_002945.4 3695883 . N . . . . GT ./.
|
|
|
3577 NC_002945.4 3695884 . N . . . . GT ./.
|
|
|
3578 NC_002945.4 3695885 . N . . . . GT ./.
|
|
|
3579 NC_002945.4 3695886 . N . . . . GT ./.
|
|
|
3580 NC_002945.4 3695887 . N . . . . GT ./.
|
|
|
3581 NC_002945.4 3695888 . N . . . . GT ./.
|
|
|
3582 NC_002945.4 3695889 . N . . . . GT ./.
|
|
|
3583 NC_002945.4 3695890 . N . . . . GT ./.
|
|
|
3584 NC_002945.4 3695891 . N . . . . GT ./.
|
|
|
3585 NC_002945.4 3695892 . N . . . . GT ./.
|
|
|
3586 NC_002945.4 3695893 . N . . . . GT ./.
|
|
|
3587 NC_002945.4 3695894 . N . . . . GT ./.
|
|
|
3588 NC_002945.4 3695895 . N . . . . GT ./.
|
|
|
3589 NC_002945.4 3695896 . N . . . . GT ./.
|
|
|
3590 NC_002945.4 3695897 . N . . . . GT ./.
|
|
|
3591 NC_002945.4 3695898 . N . . . . GT ./.
|
|
|
3592 NC_002945.4 3695899 . N . . . . GT ./.
|
|
|
3593 NC_002945.4 3695900 . N . . . . GT ./.
|
|
|
3594 NC_002945.4 3695901 . N . . . . GT ./.
|
|
|
3595 NC_002945.4 3695902 . N . . . . GT ./.
|
|
|
3596 NC_002945.4 3695903 . N . . . . GT ./.
|
|
|
3597 NC_002945.4 3695904 . N . . . . GT ./.
|
|
|
3598 NC_002945.4 3695905 . N . . . . GT ./.
|
|
|
3599 NC_002945.4 3695906 . N . . . . GT ./.
|
|
|
3600 NC_002945.4 3695907 . N . . . . GT ./.
|
|
|
3601 NC_002945.4 3695908 . N . . . . GT ./.
|
|
|
3602 NC_002945.4 3695909 . N . . . . GT ./.
|
|
|
3603 NC_002945.4 3695910 . N . . . . GT ./.
|
|
|
3604 NC_002945.4 3695911 . N . . . . GT ./.
|
|
|
3605 NC_002945.4 3695912 . N . . . . GT ./.
|
|
|
3606 NC_002945.4 3695913 . N . . . . GT ./.
|
|
|
3607 NC_002945.4 3695914 . N . . . . GT ./.
|
|
|
3608 NC_002945.4 3695915 . N . . . . GT ./.
|
|
|
3609 NC_002945.4 3695916 . N . . . . GT ./.
|
|
|
3610 NC_002945.4 3695917 . N . . . . GT ./.
|
|
|
3611 NC_002945.4 3695918 . N . . . . GT ./.
|
|
|
3612 NC_002945.4 3695919 . N . . . . GT ./.
|
|
|
3613 NC_002945.4 3695920 . N . . . . GT ./.
|
|
|
3614 NC_002945.4 3695921 . N . . . . GT ./.
|
|
|
3615 NC_002945.4 3695922 . N . . . . GT ./.
|
|
|
3616 NC_002945.4 3695923 . N . . . . GT ./.
|
|
|
3617 NC_002945.4 3695924 . N . . . . GT ./.
|
|
|
3618 NC_002945.4 3695925 . N . . . . GT ./.
|
|
|
3619 NC_002945.4 3695926 . N . . . . GT ./.
|
|
|
3620 NC_002945.4 3695927 . N . . . . GT ./.
|
|
|
3621 NC_002945.4 3695928 . N . . . . GT ./.
|
|
|
3622 NC_002945.4 3695929 . N . . . . GT ./.
|
|
|
3623 NC_002945.4 3695930 . N . . . . GT ./.
|
|
|
3624 NC_002945.4 3695931 . N . . . . GT ./.
|
|
|
3625 NC_002945.4 3695932 . N . . . . GT ./.
|
|
|
3626 NC_002945.4 3695933 . N . . . . GT ./.
|
|
|
3627 NC_002945.4 3695934 . N . . . . GT ./.
|
|
|
3628 NC_002945.4 3695935 . N . . . . GT ./.
|
|
|
3629 NC_002945.4 3695936 . N . . . . GT ./.
|
|
|
3630 NC_002945.4 3695937 . N . . . . GT ./.
|
|
|
3631 NC_002945.4 3695938 . N . . . . GT ./.
|
|
|
3632 NC_002945.4 3695939 . N . . . . GT ./.
|
|
|
3633 NC_002945.4 3695940 . N . . . . GT ./.
|
|
|
3634 NC_002945.4 3695941 . N . . . . GT ./.
|
|
|
3635 NC_002945.4 3695942 . N . . . . GT ./.
|
|
|
3636 NC_002945.4 3695943 . N . . . . GT ./.
|
|
|
3637 NC_002945.4 3695944 . N . . . . GT ./.
|
|
|
3638 NC_002945.4 3695945 . N . . . . GT ./.
|
|
|
3639 NC_002945.4 3695946 . N . . . . GT ./.
|
|
|
3640 NC_002945.4 3695947 . N . . . . GT ./.
|
|
|
3641 NC_002945.4 3695948 . N . . . . GT ./.
|
|
|
3642 NC_002945.4 3695949 . N . . . . GT ./.
|
|
|
3643 NC_002945.4 3695950 . N . . . . GT ./.
|
|
|
3644 NC_002945.4 3695951 . N . . . . GT ./.
|
|
|
3645 NC_002945.4 3695952 . N . . . . GT ./.
|
|
|
3646 NC_002945.4 3695953 . N . . . . GT ./.
|
|
|
3647 NC_002945.4 3695954 . N . . . . GT ./.
|
|
|
3648 NC_002945.4 3695955 . N . . . . GT ./.
|
|
|
3649 NC_002945.4 3695956 . N . . . . GT ./.
|
|
|
3650 NC_002945.4 3695957 . N . . . . GT ./.
|
|
|
3651 NC_002945.4 3695958 . N . . . . GT ./.
|
|
|
3652 NC_002945.4 3695959 . N . . . . GT ./.
|
|
|
3653 NC_002945.4 3695960 . N . . . . GT ./.
|
|
|
3654 NC_002945.4 3695961 . N . . . . GT ./.
|
|
|
3655 NC_002945.4 3695962 . N . . . . GT ./.
|
|
|
3656 NC_002945.4 3695963 . N . . . . GT ./.
|
|
|
3657 NC_002945.4 3695964 . N . . . . GT ./.
|
|
|
3658 NC_002945.4 3695965 . N . . . . GT ./.
|
|
|
3659 NC_002945.4 3695966 . N . . . . GT ./.
|
|
|
3660 NC_002945.4 3695967 . N . . . . GT ./.
|
|
|
3661 NC_002945.4 3695968 . N . . . . GT ./.
|
|
|
3662 NC_002945.4 3695969 . N . . . . GT ./.
|
|
|
3663 NC_002945.4 3695970 . N . . . . GT ./.
|
|
|
3664 NC_002945.4 3695971 . N . . . . GT ./.
|
|
|
3665 NC_002945.4 3695972 . N . . . . GT ./.
|
|
|
3666 NC_002945.4 3695973 . N . . . . GT ./.
|
|
|
3667 NC_002945.4 3695974 . N . . . . GT ./.
|
|
|
3668 NC_002945.4 3695975 . N . . . . GT ./.
|
|
|
3669 NC_002945.4 3695976 . N . . . . GT ./.
|
|
|
3670 NC_002945.4 3695977 . N . . . . GT ./.
|
|
|
3671 NC_002945.4 3695978 . N . . . . GT ./.
|
|
|
3672 NC_002945.4 3695979 . N . . . . GT ./.
|
|
|
3673 NC_002945.4 3695980 . N . . . . GT ./.
|
|
|
3674 NC_002945.4 3695981 . N . . . . GT ./.
|
|
|
3675 NC_002945.4 3695982 . N . . . . GT ./.
|
|
|
3676 NC_002945.4 3695983 . N . . . . GT ./.
|
|
|
3677 NC_002945.4 3695984 . N . . . . GT ./.
|
|
|
3678 NC_002945.4 3695985 . N . . . . GT ./.
|
|
|
3679 NC_002945.4 3695986 . N . . . . GT ./.
|
|
|
3680 NC_002945.4 3695987 . N . . . . GT ./.
|
|
|
3681 NC_002945.4 3695988 . N . . . . GT ./.
|
|
|
3682 NC_002945.4 3695989 . N . . . . GT ./.
|
|
|
3683 NC_002945.4 3695990 . N . . . . GT ./.
|
|
|
3684 NC_002945.4 3695991 . N . . . . GT ./.
|
|
|
3685 NC_002945.4 3695992 . N . . . . GT ./.
|
|
|
3686 NC_002945.4 3695993 . N . . . . GT ./.
|
|
|
3687 NC_002945.4 3695994 . N . . . . GT ./.
|
|
|
3688 NC_002945.4 3695995 . N . . . . GT ./.
|
|
|
3689 NC_002945.4 3695996 . N . . . . GT ./.
|
|
|
3690 NC_002945.4 3695997 . N . . . . GT ./.
|
|
|
3691 NC_002945.4 3695998 . N . . . . GT ./.
|
|
|
3692 NC_002945.4 3695999 . N . . . . GT ./.
|
|
|
3693 NC_002945.4 3696000 . N . . . . GT ./.
|
|
|
3694 NC_002945.4 3696001 . N . . . . GT ./.
|
|
|
3695 NC_002945.4 3696002 . N . . . . GT ./.
|
|
|
3696 NC_002945.4 3696003 . N . . . . GT ./.
|
|
|
3697 NC_002945.4 3696004 . N . . . . GT ./.
|
|
|
3698 NC_002945.4 3696005 . N . . . . GT ./.
|
|
|
3699 NC_002945.4 3696006 . N . . . . GT ./.
|
|
|
3700 NC_002945.4 3696007 . N . . . . GT ./.
|
|
|
3701 NC_002945.4 3696008 . N . . . . GT ./.
|
|
|
3702 NC_002945.4 3696009 . N . . . . GT ./.
|
|
|
3703 NC_002945.4 3696010 . N . . . . GT ./.
|
|
|
3704 NC_002945.4 3696011 . N . . . . GT ./.
|
|
|
3705 NC_002945.4 3696012 . N . . . . GT ./.
|
|
|
3706 NC_002945.4 3696013 . N . . . . GT ./.
|
|
|
3707 NC_002945.4 3696014 . N . . . . GT ./.
|
|
|
3708 NC_002945.4 3696015 . N . . . . GT ./.
|
|
|
3709 NC_002945.4 3696016 . N . . . . GT ./.
|
|
|
3710 NC_002945.4 3696017 . N . . . . GT ./.
|
|
|
3711 NC_002945.4 3696018 . N . . . . GT ./.
|
|
|
3712 NC_002945.4 3696019 . N . . . . GT ./.
|
|
|
3713 NC_002945.4 3696020 . N . . . . GT ./.
|
|
|
3714 NC_002945.4 3696021 . N . . . . GT ./.
|
|
|
3715 NC_002945.4 3696022 . N . . . . GT ./.
|
|
|
3716 NC_002945.4 3696023 . N . . . . GT ./.
|
|
|
3717 NC_002945.4 3696024 . N . . . . GT ./.
|
|
|
3718 NC_002945.4 3696025 . N . . . . GT ./.
|
|
|
3719 NC_002945.4 3696026 . N . . . . GT ./.
|
|
|
3720 NC_002945.4 3696027 . N . . . . GT ./.
|
|
|
3721 NC_002945.4 3696028 . N . . . . GT ./.
|
|
|
3722 NC_002945.4 3696029 . N . . . . GT ./.
|
|
|
3723 NC_002945.4 3696030 . N . . . . GT ./.
|
|
|
3724 NC_002945.4 3696031 . N . . . . GT ./.
|
|
|
3725 NC_002945.4 3696032 . N . . . . GT ./.
|
|
|
3726 NC_002945.4 3696033 . N . . . . GT ./.
|
|
|
3727 NC_002945.4 3696034 . N . . . . GT ./.
|
|
|
3728 NC_002945.4 3696035 . N . . . . GT ./.
|
|
|
3729 NC_002945.4 3696036 . N . . . . GT ./.
|
|
|
3730 NC_002945.4 3696037 . N . . . . GT ./.
|
|
|
3731 NC_002945.4 3696038 . N . . . . GT ./.
|
|
|
3732 NC_002945.4 3696039 . N . . . . GT ./.
|
|
|
3733 NC_002945.4 3696040 . N . . . . GT ./.
|
|
|
3734 NC_002945.4 3696041 . N . . . . GT ./.
|
|
|
3735 NC_002945.4 3696042 . N . . . . GT ./.
|
|
|
3736 NC_002945.4 3696043 . N . . . . GT ./.
|
|
|
3737 NC_002945.4 3696044 . N . . . . GT ./.
|
|
|
3738 NC_002945.4 3696045 . N . . . . GT ./.
|
|
|
3739 NC_002945.4 3696046 . N . . . . GT ./.
|
|
|
3740 NC_002945.4 3696047 . N . . . . GT ./.
|
|
|
3741 NC_002945.4 3696048 . N . . . . GT ./.
|
|
|
3742 NC_002945.4 3696049 . N . . . . GT ./.
|
|
|
3743 NC_002945.4 3696050 . N . . . . GT ./.
|
|
|
3744 NC_002945.4 3696051 . N . . . . GT ./.
|
|
|
3745 NC_002945.4 3696052 . N . . . . GT ./.
|
|
|
3746 NC_002945.4 3696053 . N . . . . GT ./.
|
|
|
3747 NC_002945.4 3696054 . N . . . . GT ./.
|
|
|
3748 NC_002945.4 3696055 . N . . . . GT ./.
|
|
|
3749 NC_002945.4 3696056 . N . . . . GT ./.
|
|
|
3750 NC_002945.4 3696057 . N . . . . GT ./.
|
|
|
3751 NC_002945.4 3696058 . N . . . . GT ./.
|
|
|
3752 NC_002945.4 3696059 . N . . . . GT ./.
|
|
|
3753 NC_002945.4 3696060 . N . . . . GT ./.
|
|
|
3754 NC_002945.4 3696061 . N . . . . GT ./.
|
|
|
3755 NC_002945.4 3696062 . N . . . . GT ./.
|
|
|
3756 NC_002945.4 3696063 . N . . . . GT ./.
|
|
|
3757 NC_002945.4 3696064 . N . . . . GT ./.
|
|
|
3758 NC_002945.4 3696065 . N . . . . GT ./.
|
|
|
3759 NC_002945.4 3696066 . N . . . . GT ./.
|
|
|
3760 NC_002945.4 3696067 . N . . . . GT ./.
|
|
|
3761 NC_002945.4 3696068 . N . . . . GT ./.
|
|
|
3762 NC_002945.4 3696069 . N . . . . GT ./.
|
|
|
3763 NC_002945.4 3696070 . N . . . . GT ./.
|
|
|
3764 NC_002945.4 3696071 . N . . . . GT ./.
|
|
|
3765 NC_002945.4 3696072 . N . . . . GT ./.
|
|
|
3766 NC_002945.4 3696073 . N . . . . GT ./.
|
|
|
3767 NC_002945.4 3696074 . N . . . . GT ./.
|
|
|
3768 NC_002945.4 3696075 . N . . . . GT ./.
|
|
|
3769 NC_002945.4 3696076 . N . . . . GT ./.
|
|
|
3770 NC_002945.4 3696077 . N . . . . GT ./.
|
|
|
3771 NC_002945.4 3696078 . N . . . . GT ./.
|
|
|
3772 NC_002945.4 3696079 . N . . . . GT ./.
|
|
|
3773 NC_002945.4 3696080 . N . . . . GT ./.
|
|
|
3774 NC_002945.4 3696081 . N . . . . GT ./.
|
|
|
3775 NC_002945.4 3696082 . N . . . . GT ./.
|
|
|
3776 NC_002945.4 3696083 . N . . . . GT ./.
|
|
|
3777 NC_002945.4 3696084 . N . . . . GT ./.
|
|
|
3778 NC_002945.4 3696085 . N . . . . GT ./.
|
|
|
3779 NC_002945.4 3696086 . N . . . . GT ./.
|
|
|
3780 NC_002945.4 3696087 . N . . . . GT ./.
|
|
|
3781 NC_002945.4 3696088 . N . . . . GT ./.
|
|
|
3782 NC_002945.4 3696089 . N . . . . GT ./.
|
|
|
3783 NC_002945.4 3696090 . N . . . . GT ./.
|
|
|
3784 NC_002945.4 3696091 . N . . . . GT ./.
|
|
|
3785 NC_002945.4 3696092 . N . . . . GT ./.
|
|
|
3786 NC_002945.4 3696093 . N . . . . GT ./.
|
|
|
3787 NC_002945.4 3696094 . N . . . . GT ./.
|
|
|
3788 NC_002945.4 3696095 . N . . . . GT ./.
|
|
|
3789 NC_002945.4 3696096 . N . . . . GT ./.
|
|
|
3790 NC_002945.4 3696097 . N . . . . GT ./.
|
|
|
3791 NC_002945.4 3696098 . N . . . . GT ./.
|
|
|
3792 NC_002945.4 3696099 . N . . . . GT ./.
|
|
|
3793 NC_002945.4 3696100 . N . . . . GT ./.
|
|
|
3794 NC_002945.4 3696101 . N . . . . GT ./.
|
|
|
3795 NC_002945.4 3696102 . N . . . . GT ./.
|
|
|
3796 NC_002945.4 3696103 . N . . . . GT ./.
|
|
|
3797 NC_002945.4 3696104 . N . . . . GT ./.
|
|
|
3798 NC_002945.4 3696105 . N . . . . GT ./.
|
|
|
3799 NC_002945.4 3696106 . N . . . . GT ./.
|
|
|
3800 NC_002945.4 3696107 . N . . . . GT ./.
|
|
|
3801 NC_002945.4 3696108 . N . . . . GT ./.
|
|
|
3802 NC_002945.4 3696109 . N . . . . GT ./.
|
|
|
3803 NC_002945.4 3696110 . N . . . . GT ./.
|
|
|
3804 NC_002945.4 3696111 . N . . . . GT ./.
|
|
|
3805 NC_002945.4 3696112 . N . . . . GT ./.
|
|
|
3806 NC_002945.4 3696113 . N . . . . GT ./.
|
|
|
3807 NC_002945.4 3696114 . N . . . . GT ./.
|
|
|
3808 NC_002945.4 3696115 . N . . . . GT ./.
|
|
|
3809 NC_002945.4 3696116 . N . . . . GT ./.
|
|
|
3810 NC_002945.4 3696117 . N . . . . GT ./.
|
|
|
3811 NC_002945.4 3696118 . N . . . . GT ./.
|
|
|
3812 NC_002945.4 3696119 . N . . . . GT ./.
|
|
|
3813 NC_002945.4 3696120 . N . . . . GT ./.
|
|
|
3814 NC_002945.4 3696121 . N . . . . GT ./.
|
|
|
3815 NC_002945.4 3696122 . N . . . . GT ./.
|
|
|
3816 NC_002945.4 3696123 . N . . . . GT ./.
|
|
|
3817 NC_002945.4 3696124 . N . . . . GT ./.
|
|
|
3818 NC_002945.4 3696125 . N . . . . GT ./.
|
|
|
3819 NC_002945.4 3696126 . N . . . . GT ./.
|
|
|
3820 NC_002945.4 3696127 . N . . . . GT ./.
|
|
|
3821 NC_002945.4 3696128 . N . . . . GT ./.
|
|
|
3822 NC_002945.4 3696129 . N . . . . GT ./.
|
|
|
3823 NC_002945.4 3696130 . N . . . . GT ./.
|
|
|
3824 NC_002945.4 3696131 . N . . . . GT ./.
|
|
|
3825 NC_002945.4 3696132 . N . . . . GT ./.
|
|
|
3826 NC_002945.4 3696133 . N . . . . GT ./.
|
|
|
3827 NC_002945.4 3696134 . N . . . . GT ./.
|
|
|
3828 NC_002945.4 3696135 . N . . . . GT ./.
|
|
|
3829 NC_002945.4 3696136 . N . . . . GT ./.
|
|
|
3830 NC_002945.4 3696137 . N . . . . GT ./.
|
|
|
3831 NC_002945.4 3696138 . N . . . . GT ./.
|
|
|
3832 NC_002945.4 3696145 . G T 478.77 . AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.20;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:507,42,0
|
|
|
3833 NC_002945.4 3696647 . N . . . . GT ./.
|
|
|
3834 NC_002945.4 3696648 . N . . . . GT ./.
|
|
|
3835 NC_002945.4 3696649 . N . . . . GT ./.
|
|
|
3836 NC_002945.4 3696650 . N . . . . GT ./.
|
|
|
3837 NC_002945.4 3696651 . N . . . . GT ./.
|
|
|
3838 NC_002945.4 3696652 . N . . . . GT ./.
|
|
|
3839 NC_002945.4 3696653 . N . . . . GT ./.
|
|
|
3840 NC_002945.4 3696654 . N . . . . GT ./.
|
|
|
3841 NC_002945.4 3696655 . N . . . . GT ./.
|
|
|
3842 NC_002945.4 3696656 . N . . . . GT ./.
|
|
|
3843 NC_002945.4 3696657 . N . . . . GT ./.
|
|
|
3844 NC_002945.4 3696658 . N . . . . GT ./.
|
|
|
3845 NC_002945.4 3696659 . N . . . . GT ./.
|
|
|
3846 NC_002945.4 3696660 . N . . . . GT ./.
|
|
|
3847 NC_002945.4 3696661 . N . . . . GT ./.
|
|
|
3848 NC_002945.4 3696662 . N . . . . GT ./.
|
|
|
3849 NC_002945.4 3696663 . N . . . . GT ./.
|
|
|
3850 NC_002945.4 3696664 . N . . . . GT ./.
|
|
|
3851 NC_002945.4 3696665 . N . . . . GT ./.
|
|
|
3852 NC_002945.4 3696666 . N . . . . GT ./.
|
|
|
3853 NC_002945.4 3696667 . N . . . . GT ./.
|
|
|
3854 NC_002945.4 3696668 . N . . . . GT ./.
|
|
|
3855 NC_002945.4 3696669 . N . . . . GT ./.
|
|
|
3856 NC_002945.4 3696670 . N . . . . GT ./.
|
|
|
3857 NC_002945.4 3696671 . N . . . . GT ./.
|
|
|
3858 NC_002945.4 3696672 . N . . . . GT ./.
|
|
|
3859 NC_002945.4 3696673 . N . . . . GT ./.
|
|
|
3860 NC_002945.4 3696674 . N . . . . GT ./.
|
|
|
3861 NC_002945.4 3696675 . N . . . . GT ./.
|
|
|
3862 NC_002945.4 3696676 . N . . . . GT ./.
|
|
|
3863 NC_002945.4 3696677 . N . . . . GT ./.
|
|
|
3864 NC_002945.4 3696678 . N . . . . GT ./.
|
|
|
3865 NC_002945.4 3696679 . N . . . . GT ./.
|
|
|
3866 NC_002945.4 3696680 . N . . . . GT ./.
|
|
|
3867 NC_002945.4 3696681 . N . . . . GT ./.
|
|
|
3868 NC_002945.4 3696682 . N . . . . GT ./.
|
|
|
3869 NC_002945.4 3696683 . N . . . . GT ./.
|
|
|
3870 NC_002945.4 3696684 . N . . . . GT ./.
|
|
|
3871 NC_002945.4 3696685 . N . . . . GT ./.
|
|
|
3872 NC_002945.4 3696686 . N . . . . GT ./.
|
|
|
3873 NC_002945.4 3696687 . N . . . . GT ./.
|
|
|
3874 NC_002945.4 3696688 . N . . . . GT ./.
|
|
|
3875 NC_002945.4 3696689 . N . . . . GT ./.
|
|
|
3876 NC_002945.4 3696690 . N . . . . GT ./.
|
|
|
3877 NC_002945.4 3696691 . N . . . . GT ./.
|
|
|
3878 NC_002945.4 3696692 . N . . . . GT ./.
|
|
|
3879 NC_002945.4 3696693 . N . . . . GT ./.
|
|
|
3880 NC_002945.4 3696694 . N . . . . GT ./.
|
|
|
3881 NC_002945.4 3696695 . N . . . . GT ./.
|
|
|
3882 NC_002945.4 3696696 . N . . . . GT ./.
|
|
|
3883 NC_002945.4 3696697 . N . . . . GT ./.
|
|
|
3884 NC_002945.4 3696698 . N . . . . GT ./.
|
|
|
3885 NC_002945.4 3696699 . N . . . . GT ./.
|
|
|
3886 NC_002945.4 3696700 . N . . . . GT ./.
|
|
|
3887 NC_002945.4 3696701 . N . . . . GT ./.
|
|
|
3888 NC_002945.4 3696702 . N . . . . GT ./.
|
|
|
3889 NC_002945.4 3696703 . N . . . . GT ./.
|
|
|
3890 NC_002945.4 3696704 . N . . . . GT ./.
|
|
|
3891 NC_002945.4 3696705 . N . . . . GT ./.
|
|
|
3892 NC_002945.4 3696706 . N . . . . GT ./.
|
|
|
3893 NC_002945.4 3696707 . N . . . . GT ./.
|
|
|
3894 NC_002945.4 3696708 . N . . . . GT ./.
|
|
|
3895 NC_002945.4 3696709 . N . . . . GT ./.
|
|
|
3896 NC_002945.4 3696710 . N . . . . GT ./.
|
|
|
3897 NC_002945.4 3696711 . N . . . . GT ./.
|
|
|
3898 NC_002945.4 3696712 . N . . . . GT ./.
|
|
|
3899 NC_002945.4 3696713 . N . . . . GT ./.
|
|
|
3900 NC_002945.4 3696714 . N . . . . GT ./.
|
|
|
3901 NC_002945.4 3696715 . N . . . . GT ./.
|
|
|
3902 NC_002945.4 3696716 . N . . . . GT ./.
|
|
|
3903 NC_002945.4 3696717 . N . . . . GT ./.
|
|
|
3904 NC_002945.4 3696718 . N . . . . GT ./.
|
|
|
3905 NC_002945.4 3696719 . N . . . . GT ./.
|
|
|
3906 NC_002945.4 3696720 . N . . . . GT ./.
|
|
|
3907 NC_002945.4 3696721 . N . . . . GT ./.
|
|
|
3908 NC_002945.4 3696722 . N . . . . GT ./.
|
|
|
3909 NC_002945.4 3696723 . N . . . . GT ./.
|
|
|
3910 NC_002945.4 3696724 . N . . . . GT ./.
|
|
|
3911 NC_002945.4 3696725 . N . . . . GT ./.
|
|
|
3912 NC_002945.4 3696726 . N . . . . GT ./.
|
|
|
3913 NC_002945.4 3696727 . N . . . . GT ./.
|
|
|
3914 NC_002945.4 3696728 . N . . . . GT ./.
|
|
|
3915 NC_002945.4 3696729 . N . . . . GT ./.
|
|
|
3916 NC_002945.4 3696730 . N . . . . GT ./.
|
|
|
3917 NC_002945.4 3696731 . N . . . . GT ./.
|
|
|
3918 NC_002945.4 3696732 . N . . . . GT ./.
|
|
|
3919 NC_002945.4 3696733 . N . . . . GT ./.
|
|
|
3920 NC_002945.4 3696734 . N . . . . GT ./.
|
|
|
3921 NC_002945.4 3696735 . N . . . . GT ./.
|
|
|
3922 NC_002945.4 3696736 . N . . . . GT ./.
|
|
|
3923 NC_002945.4 3696737 . N . . . . GT ./.
|
|
|
3924 NC_002945.4 3696738 . N . . . . GT ./.
|
|
|
3925 NC_002945.4 3700297 . N . . . . GT ./.
|
|
|
3926 NC_002945.4 3700298 . N . . . . GT ./.
|
|
|
3927 NC_002945.4 3700299 . N . . . . GT ./.
|
|
|
3928 NC_002945.4 3700300 . N . . . . GT ./.
|
|
|
3929 NC_002945.4 3705707 . A G 4637.77 . AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.81;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,161:161:99:4666,481,0
|
|
|
3930 NC_002945.4 3719802 . A G 7098.77 . AC=2;AF=1.00;AN=2;DP=223;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,223:223:99:7127,666,0
|
|
|
3931 NC_002945.4 3723554 . C G 6531.77 . AC=2;AF=1.00;AN=2;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,201:201:99:6560,602,0
|
|
|
3932 NC_002945.4 3725203 . G A 4822.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.581;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.09;ReadPosRankSum=-1.168;SOR=1.185 GT:AD:DP:GQ:PL 1/1:2,176:178:99:4851,479,0
|
|
|
3933 NC_002945.4 3729351 . G T 6886.77 . AC=2;AF=1.00;AN=2;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.69;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,240:240:99:6915,716,0
|
|
|
3934 NC_002945.4 3737478 . N . . . . GT ./.
|
|
|
3935 NC_002945.4 3737479 . N . . . . GT ./.
|
|
|
3936 NC_002945.4 3737480 . N . . . . GT ./.
|
|
|
3937 NC_002945.4 3737481 . N . . . . GT ./.
|
|
|
3938 NC_002945.4 3737482 . N . . . . GT ./.
|
|
|
3939 NC_002945.4 3737483 . N . . . . GT ./.
|
|
|
3940 NC_002945.4 3737484 . N . . . . GT ./.
|
|
|
3941 NC_002945.4 3737485 . N . . . . GT ./.
|
|
|
3942 NC_002945.4 3737486 . N . . . . GT ./.
|
|
|
3943 NC_002945.4 3737487 . N . . . . GT ./.
|
|
|
3944 NC_002945.4 3737488 . N . . . . GT ./.
|
|
|
3945 NC_002945.4 3737489 . N . . . . GT ./.
|
|
|
3946 NC_002945.4 3737490 . N . . . . GT ./.
|
|
|
3947 NC_002945.4 3737491 . N . . . . GT ./.
|
|
|
3948 NC_002945.4 3737492 . N . . . . GT ./.
|
|
|
3949 NC_002945.4 3737493 . N . . . . GT ./.
|
|
|
3950 NC_002945.4 3737494 . N . . . . GT ./.
|
|
|
3951 NC_002945.4 3737495 . N . . . . GT ./.
|
|
|
3952 NC_002945.4 3737496 . N . . . . GT ./.
|
|
|
3953 NC_002945.4 3737497 . N . . . . GT ./.
|
|
|
3954 NC_002945.4 3737498 . N . . . . GT ./.
|
|
|
3955 NC_002945.4 3737499 . N . . . . GT ./.
|
|
|
3956 NC_002945.4 3737500 . N . . . . GT ./.
|
|
|
3957 NC_002945.4 3737501 . N . . . . GT ./.
|
|
|
3958 NC_002945.4 3737502 . N . . . . GT ./.
|
|
|
3959 NC_002945.4 3737503 . N . . . . GT ./.
|
|
|
3960 NC_002945.4 3737504 . N . . . . GT ./.
|
|
|
3961 NC_002945.4 3737505 . N . . . . GT ./.
|
|
|
3962 NC_002945.4 3737506 . N . . . . GT ./.
|
|
|
3963 NC_002945.4 3737507 . N . . . . GT ./.
|
|
|
3964 NC_002945.4 3737508 . N . . . . GT ./.
|
|
|
3965 NC_002945.4 3737509 . N . . . . GT ./.
|
|
|
3966 NC_002945.4 3737510 . N . . . . GT ./.
|
|
|
3967 NC_002945.4 3737511 . N . . . . GT ./.
|
|
|
3968 NC_002945.4 3737512 . N . . . . GT ./.
|
|
|
3969 NC_002945.4 3737513 . N . . . . GT ./.
|
|
|
3970 NC_002945.4 3737514 . N . . . . GT ./.
|
|
|
3971 NC_002945.4 3737515 . N . . . . GT ./.
|
|
|
3972 NC_002945.4 3737516 . N . . . . GT ./.
|
|
|
3973 NC_002945.4 3737517 . N . . . . GT ./.
|
|
|
3974 NC_002945.4 3737518 . N . . . . GT ./.
|
|
|
3975 NC_002945.4 3737519 . N . . . . GT ./.
|
|
|
3976 NC_002945.4 3737520 . N . . . . GT ./.
|
|
|
3977 NC_002945.4 3737521 . N . . . . GT ./.
|
|
|
3978 NC_002945.4 3737522 . N . . . . GT ./.
|
|
|
3979 NC_002945.4 3737523 . N . . . . GT ./.
|
|
|
3980 NC_002945.4 3737524 . N . . . . GT ./.
|
|
|
3981 NC_002945.4 3737525 . N . . . . GT ./.
|
|
|
3982 NC_002945.4 3737526 . N . . . . GT ./.
|
|
|
3983 NC_002945.4 3737527 . N . . . . GT ./.
|
|
|
3984 NC_002945.4 3737528 . N . . . . GT ./.
|
|
|
3985 NC_002945.4 3737529 . N . . . . GT ./.
|
|
|
3986 NC_002945.4 3737530 . N . . . . GT ./.
|
|
|
3987 NC_002945.4 3737531 . N . . . . GT ./.
|
|
|
3988 NC_002945.4 3737532 . N . . . . GT ./.
|
|
|
3989 NC_002945.4 3737533 . N . . . . GT ./.
|
|
|
3990 NC_002945.4 3737534 . N . . . . GT ./.
|
|
|
3991 NC_002945.4 3737535 . N . . . . GT ./.
|
|
|
3992 NC_002945.4 3737536 . N . . . . GT ./.
|
|
|
3993 NC_002945.4 3737537 . N . . . . GT ./.
|
|
|
3994 NC_002945.4 3737538 . N . . . . GT ./.
|
|
|
3995 NC_002945.4 3737539 . N . . . . GT ./.
|
|
|
3996 NC_002945.4 3737540 . N . . . . GT ./.
|
|
|
3997 NC_002945.4 3737541 . N . . . . GT ./.
|
|
|
3998 NC_002945.4 3737542 . N . . . . GT ./.
|
|
|
3999 NC_002945.4 3737543 . N . . . . GT ./.
|
|
|
4000 NC_002945.4 3737544 . N . . . . GT ./.
|
|
|
4001 NC_002945.4 3737545 . N . . . . GT ./.
|
|
|
4002 NC_002945.4 3737546 . N . . . . GT ./.
|
|
|
4003 NC_002945.4 3737547 . N . . . . GT ./.
|
|
|
4004 NC_002945.4 3737548 . N . . . . GT ./.
|
|
|
4005 NC_002945.4 3737549 . N . . . . GT ./.
|
|
|
4006 NC_002945.4 3737550 . N . . . . GT ./.
|
|
|
4007 NC_002945.4 3737551 . N . . . . GT ./.
|
|
|
4008 NC_002945.4 3737552 . N . . . . GT ./.
|
|
|
4009 NC_002945.4 3737553 . N . . . . GT ./.
|
|
|
4010 NC_002945.4 3737554 . N . . . . GT ./.
|
|
|
4011 NC_002945.4 3737555 . N . . . . GT ./.
|
|
|
4012 NC_002945.4 3737556 . N . . . . GT ./.
|
|
|
4013 NC_002945.4 3737557 . N . . . . GT ./.
|
|
|
4014 NC_002945.4 3737558 . N . . . . GT ./.
|
|
|
4015 NC_002945.4 3737559 . N . . . . GT ./.
|
|
|
4016 NC_002945.4 3737560 . N . . . . GT ./.
|
|
|
4017 NC_002945.4 3737561 . N . . . . GT ./.
|
|
|
4018 NC_002945.4 3737562 . N . . . . GT ./.
|
|
|
4019 NC_002945.4 3737563 . N . . . . GT ./.
|
|
|
4020 NC_002945.4 3737564 . N . . . . GT ./.
|
|
|
4021 NC_002945.4 3737565 . N . . . . GT ./.
|
|
|
4022 NC_002945.4 3737566 . N . . . . GT ./.
|
|
|
4023 NC_002945.4 3737567 . N . . . . GT ./.
|
|
|
4024 NC_002945.4 3737568 . N . . . . GT ./.
|
|
|
4025 NC_002945.4 3737569 . N . . . . GT ./.
|
|
|
4026 NC_002945.4 3737570 . N . . . . GT ./.
|
|
|
4027 NC_002945.4 3737571 . N . . . . GT ./.
|
|
|
4028 NC_002945.4 3737572 . N . . . . GT ./.
|
|
|
4029 NC_002945.4 3737573 . N . . . . GT ./.
|
|
|
4030 NC_002945.4 3737574 . N . . . . GT ./.
|
|
|
4031 NC_002945.4 3737575 . N . . . . GT ./.
|
|
|
4032 NC_002945.4 3737576 . N . . . . GT ./.
|
|
|
4033 NC_002945.4 3737577 . N . . . . GT ./.
|
|
|
4034 NC_002945.4 3737578 . N . . . . GT ./.
|
|
|
4035 NC_002945.4 3737579 . N . . . . GT ./.
|
|
|
4036 NC_002945.4 3737580 . N . . . . GT ./.
|
|
|
4037 NC_002945.4 3737581 . N . . . . GT ./.
|
|
|
4038 NC_002945.4 3737582 . N . . . . GT ./.
|
|
|
4039 NC_002945.4 3737583 . N . . . . GT ./.
|
|
|
4040 NC_002945.4 3737584 . N . . . . GT ./.
|
|
|
4041 NC_002945.4 3737585 . N . . . . GT ./.
|
|
|
4042 NC_002945.4 3737586 . N . . . . GT ./.
|
|
|
4043 NC_002945.4 3737587 . N . . . . GT ./.
|
|
|
4044 NC_002945.4 3737588 . N . . . . GT ./.
|
|
|
4045 NC_002945.4 3737589 . N . . . . GT ./.
|
|
|
4046 NC_002945.4 3737590 . N . . . . GT ./.
|
|
|
4047 NC_002945.4 3737591 . N . . . . GT ./.
|
|
|
4048 NC_002945.4 3737592 . N . . . . GT ./.
|
|
|
4049 NC_002945.4 3737593 . N . . . . GT ./.
|
|
|
4050 NC_002945.4 3737594 . N . . . . GT ./.
|
|
|
4051 NC_002945.4 3737595 . N . . . . GT ./.
|
|
|
4052 NC_002945.4 3737596 . N . . . . GT ./.
|
|
|
4053 NC_002945.4 3737597 . N . . . . GT ./.
|
|
|
4054 NC_002945.4 3737598 . N . . . . GT ./.
|
|
|
4055 NC_002945.4 3737599 . N . . . . GT ./.
|
|
|
4056 NC_002945.4 3737600 . N . . . . GT ./.
|
|
|
4057 NC_002945.4 3737601 . N . . . . GT ./.
|
|
|
4058 NC_002945.4 3737602 . N . . . . GT ./.
|
|
|
4059 NC_002945.4 3737603 . N . . . . GT ./.
|
|
|
4060 NC_002945.4 3737604 . N . . . . GT ./.
|
|
|
4061 NC_002945.4 3737605 . N . . . . GT ./.
|
|
|
4062 NC_002945.4 3737606 . N . . . . GT ./.
|
|
|
4063 NC_002945.4 3737607 . N . . . . GT ./.
|
|
|
4064 NC_002945.4 3737608 . N . . . . GT ./.
|
|
|
4065 NC_002945.4 3737609 . N . . . . GT ./.
|
|
|
4066 NC_002945.4 3737610 . N . . . . GT ./.
|
|
|
4067 NC_002945.4 3737611 . N . . . . GT ./.
|
|
|
4068 NC_002945.4 3737612 . N . . . . GT ./.
|
|
|
4069 NC_002945.4 3737613 . N . . . . GT ./.
|
|
|
4070 NC_002945.4 3737614 . N . . . . GT ./.
|
|
|
4071 NC_002945.4 3737615 . N . . . . GT ./.
|
|
|
4072 NC_002945.4 3737616 . N . . . . GT ./.
|
|
|
4073 NC_002945.4 3737617 . N . . . . GT ./.
|
|
|
4074 NC_002945.4 3737618 . N . . . . GT ./.
|
|
|
4075 NC_002945.4 3737619 . N . . . . GT ./.
|
|
|
4076 NC_002945.4 3737620 . N . . . . GT ./.
|
|
|
4077 NC_002945.4 3737621 . N . . . . GT ./.
|
|
|
4078 NC_002945.4 3737622 . N . . . . GT ./.
|
|
|
4079 NC_002945.4 3737623 . N . . . . GT ./.
|
|
|
4080 NC_002945.4 3737624 . N . . . . GT ./.
|
|
|
4081 NC_002945.4 3737625 . N . . . . GT ./.
|
|
|
4082 NC_002945.4 3737626 . N . . . . GT ./.
|
|
|
4083 NC_002945.4 3737627 . N . . . . GT ./.
|
|
|
4084 NC_002945.4 3737628 . N . . . . GT ./.
|
|
|
4085 NC_002945.4 3737629 . N . . . . GT ./.
|
|
|
4086 NC_002945.4 3737630 . N . . . . GT ./.
|
|
|
4087 NC_002945.4 3737631 . N . . . . GT ./.
|
|
|
4088 NC_002945.4 3737632 . N . . . . GT ./.
|
|
|
4089 NC_002945.4 3737633 . N . . . . GT ./.
|
|
|
4090 NC_002945.4 3737634 . N . . . . GT ./.
|
|
|
4091 NC_002945.4 3737635 . N . . . . GT ./.
|
|
|
4092 NC_002945.4 3737636 . N . . . . GT ./.
|
|
|
4093 NC_002945.4 3737637 . N . . . . GT ./.
|
|
|
4094 NC_002945.4 3737638 . N . . . . GT ./.
|
|
|
4095 NC_002945.4 3737639 . N . . . . GT ./.
|
|
|
4096 NC_002945.4 3737640 . N . . . . GT ./.
|
|
|
4097 NC_002945.4 3737641 . N . . . . GT ./.
|
|
|
4098 NC_002945.4 3737642 . N . . . . GT ./.
|
|
|
4099 NC_002945.4 3737643 . N . . . . GT ./.
|
|
|
4100 NC_002945.4 3737644 . N . . . . GT ./.
|
|
|
4101 NC_002945.4 3737645 . N . . . . GT ./.
|
|
|
4102 NC_002945.4 3737646 . N . . . . GT ./.
|
|
|
4103 NC_002945.4 3737647 . N . . . . GT ./.
|
|
|
4104 NC_002945.4 3737648 . N . . . . GT ./.
|
|
|
4105 NC_002945.4 3737649 . N . . . . GT ./.
|
|
|
4106 NC_002945.4 3737650 . N . . . . GT ./.
|
|
|
4107 NC_002945.4 3737651 . N . . . . GT ./.
|
|
|
4108 NC_002945.4 3737652 . N . . . . GT ./.
|
|
|
4109 NC_002945.4 3737653 . N . . . . GT ./.
|
|
|
4110 NC_002945.4 3737654 . N . . . . GT ./.
|
|
|
4111 NC_002945.4 3737655 . N . . . . GT ./.
|
|
|
4112 NC_002945.4 3737656 . N . . . . GT ./.
|
|
|
4113 NC_002945.4 3737657 . N . . . . GT ./.
|
|
|
4114 NC_002945.4 3737658 . N . . . . GT ./.
|
|
|
4115 NC_002945.4 3737659 . N . . . . GT ./.
|
|
|
4116 NC_002945.4 3737660 . N . . . . GT ./.
|
|
|
4117 NC_002945.4 3737661 . N . . . . GT ./.
|
|
|
4118 NC_002945.4 3737662 . N . . . . GT ./.
|
|
|
4119 NC_002945.4 3737663 . N . . . . GT ./.
|
|
|
4120 NC_002945.4 3737664 . N . . . . GT ./.
|
|
|
4121 NC_002945.4 3759787 . N . . . . GT ./.
|
|
|
4122 NC_002945.4 3759788 . N . . . . GT ./.
|
|
|
4123 NC_002945.4 3759789 . N . . . . GT ./.
|
|
|
4124 NC_002945.4 3759790 . N . . . . GT ./.
|
|
|
4125 NC_002945.4 3759791 . N . . . . GT ./.
|
|
|
4126 NC_002945.4 3759792 . N . . . . GT ./.
|
|
|
4127 NC_002945.4 3759793 . N . . . . GT ./.
|
|
|
4128 NC_002945.4 3759794 . N . . . . GT ./.
|
|
|
4129 NC_002945.4 3776764 . A G 7399.77 . AC=2;AF=1.00;AN=2;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,230:230:99:7428,684,0
|
|
|
4130 NC_002945.4 3777253 . G C 3000.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.203;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.72;MQRankSum=-1.904;QD=31.08;ReadPosRankSum=3.802;SOR=1.179 GT:AD:DP:GQ:PL 1/1:5,67:72:99:3029,153,0
|
|
|
4131 NC_002945.4 3777256 . T G 2904.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.652;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=1.661;MLEAC=2;MLEAF=1.00;MQ=55.84;MQRankSum=-1.973;QD=27.57;ReadPosRankSum=4.394;SOR=1.270 GT:AD:DP:GQ:PL 1/1:7,67:74:99:2933,138,0
|
|
|
4132 NC_002945.4 3778473 . A G 7576.77 . AC=2;AF=1.00;AN=2;DP=233;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,233:233:99:7605,699,0
|
|
|
4133 NC_002945.4 3778719 . G A 6799.77 . AC=2;AF=1.00;AN=2;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.69;SOR=1.488 GT:AD:DP:GQ:PL 1/1:0,229:229:99:6828,684,0
|
|
|
4134 NC_002945.4 3780305 . A T 6278.77 . AC=2;AF=1.00;AN=2;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.48;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,206:206:99:6307,613,0
|
|
|
4135 NC_002945.4 3791670 . A C 7394.77 . AC=2;AF=1.00;AN=2;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,228:228:99:7423,681,0
|
|
|
4136 NC_002945.4 3805467 . T C 9411.77 . AC=2;AF=1.00;AN=2;DP=321;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.41;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,320:320:99:9440,954,0
|
|
|
4137 NC_002945.4 3807018 . C T 8530.77 . AC=2;AF=1.00;AN=2;DP=281;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.36;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,281:281:99:8559,838,0
|
|
|
4138 NC_002945.4 3816878 . T C 7880.77 . AC=2;AF=1.00;AN=2;DP=257;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,256:256:99:7909,767,0
|
|
|
4139 NC_002945.4 3830695 . N . . . . GT ./.
|
|
|
4140 NC_002945.4 3830696 . N . . . . GT ./.
|
|
|
4141 NC_002945.4 3830697 . N . . . . GT ./.
|
|
|
4142 NC_002945.4 3830698 . N . . . . GT ./.
|
|
|
4143 NC_002945.4 3830699 . N . . . . GT ./.
|
|
|
4144 NC_002945.4 3830700 . N . . . . GT ./.
|
|
|
4145 NC_002945.4 3830701 . N . . . . GT ./.
|
|
|
4146 NC_002945.4 3830702 . N . . . . GT ./.
|
|
|
4147 NC_002945.4 3830703 . N . . . . GT ./.
|
|
|
4148 NC_002945.4 3830704 . N . . . . GT ./.
|
|
|
4149 NC_002945.4 3830705 . N . . . . GT ./.
|
|
|
4150 NC_002945.4 3830706 . N . . . . GT ./.
|
|
|
4151 NC_002945.4 3830707 . N . . . . GT ./.
|
|
|
4152 NC_002945.4 3830708 . N . . . . GT ./.
|
|
|
4153 NC_002945.4 3836507 . T C 814.77 . AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=28.45;QD=30.18;SOR=6.666 GT:AD:DP:GQ:PL 1/1:0,27:27:81:843,81,0
|
|
|
4154 NC_002945.4 3837015 . G A 3725.77 . AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=2.113 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3754,358,0
|
|
|
4155 NC_002945.4 3839650 . T C 6990.77 . AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,217:217:99:7019,649,0
|
|
|
4156 NC_002945.4 3846020 . G C 5581.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.702;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=3.156;MLEAC=2;MLEAF=1.00;MQ=53.55;MQRankSum=-0.833;QD=30.67;ReadPosRankSum=-0.453;SOR=0.347 GT:AD:DP:GQ:PL 1/1:1,181:182:99:5610,531,0
|
|
|
4157 NC_002945.4 3846082 . G A 5033.77 . AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.04;QD=32.27;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,156:156:99:5062,468,0
|
|
|
4158 NC_002945.4 3849304 . G A 7761.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=-0.713;ClippingRankSum=0.000;DP=245;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.94;ReadPosRankSum=-0.639;SOR=0.406 GT:AD:DP:GQ:PL 1/1:1,242:243:99:7790,686,0
|
|
|
4159 NC_002945.4 3878172 . N . . . . GT ./.
|
|
|
4160 NC_002945.4 3878173 . N . . . . GT ./.
|
|
|
4161 NC_002945.4 3878174 . N . . . . GT ./.
|
|
|
4162 NC_002945.4 3878175 . N . . . . GT ./.
|
|
|
4163 NC_002945.4 3878176 . N . . . . GT ./.
|
|
|
4164 NC_002945.4 3878177 . N . . . . GT ./.
|
|
|
4165 NC_002945.4 3878178 . N . . . . GT ./.
|
|
|
4166 NC_002945.4 3878179 . N . . . . GT ./.
|
|
|
4167 NC_002945.4 3878180 . N . . . . GT ./.
|
|
|
4168 NC_002945.4 3878181 . N . . . . GT ./.
|
|
|
4169 NC_002945.4 3878182 . N . . . . GT ./.
|
|
|
4170 NC_002945.4 3878183 . N . . . . GT ./.
|
|
|
4171 NC_002945.4 3878184 . N . . . . GT ./.
|
|
|
4172 NC_002945.4 3878185 . N . . . . GT ./.
|
|
|
4173 NC_002945.4 3878186 . N . . . . GT ./.
|
|
|
4174 NC_002945.4 3878187 . N . . . . GT ./.
|
|
|
4175 NC_002945.4 3878188 . N . . . . GT ./.
|
|
|
4176 NC_002945.4 3881590 . N . . . . GT ./.
|
|
|
4177 NC_002945.4 3881591 . N . . . . GT ./.
|
|
|
4178 NC_002945.4 3881592 . N . . . . GT ./.
|
|
|
4179 NC_002945.4 3881593 . N . . . . GT ./.
|
|
|
4180 NC_002945.4 3881594 . N . . . . GT ./.
|
|
|
4181 NC_002945.4 3881595 . N . . . . GT ./.
|
|
|
4182 NC_002945.4 3881596 . N . . . . GT ./.
|
|
|
4183 NC_002945.4 3881597 . N . . . . GT ./.
|
|
|
4184 NC_002945.4 3881598 . N . . . . GT ./.
|
|
|
4185 NC_002945.4 3881599 . N . . . . GT ./.
|
|
|
4186 NC_002945.4 3881600 . N . . . . GT ./.
|
|
|
4187 NC_002945.4 3881601 . N . . . . GT ./.
|
|
|
4188 NC_002945.4 3881602 . N . . . . GT ./.
|
|
|
4189 NC_002945.4 3881603 . N . . . . GT ./.
|
|
|
4190 NC_002945.4 3881604 . N . . . . GT ./.
|
|
|
4191 NC_002945.4 3881605 . N . . . . GT ./.
|
|
|
4192 NC_002945.4 3881606 . N . . . . GT ./.
|
|
|
4193 NC_002945.4 3881607 . N . . . . GT ./.
|
|
|
4194 NC_002945.4 3881608 . N . . . . GT ./.
|
|
|
4195 NC_002945.4 3881609 . N . . . . GT ./.
|
|
|
4196 NC_002945.4 3881610 . N . . . . GT ./.
|
|
|
4197 NC_002945.4 3881611 . N . . . . GT ./.
|
|
|
4198 NC_002945.4 3881612 . N . . . . GT ./.
|
|
|
4199 NC_002945.4 3881613 . N . . . . GT ./.
|
|
|
4200 NC_002945.4 3881614 . N . . . . GT ./.
|
|
|
4201 NC_002945.4 3881615 . N . . . . GT ./.
|
|
|
4202 NC_002945.4 3881616 . N . . . . GT ./.
|
|
|
4203 NC_002945.4 3881617 . N . . . . GT ./.
|
|
|
4204 NC_002945.4 3881618 . N . . . . GT ./.
|
|
|
4205 NC_002945.4 3881619 . N . . . . GT ./.
|
|
|
4206 NC_002945.4 3881620 . N . . . . GT ./.
|
|
|
4207 NC_002945.4 3881621 . N . . . . GT ./.
|
|
|
4208 NC_002945.4 3881622 . N . . . . GT ./.
|
|
|
4209 NC_002945.4 3881623 . N . . . . GT ./.
|
|
|
4210 NC_002945.4 3881624 . N . . . . GT ./.
|
|
|
4211 NC_002945.4 3881625 . N . . . . GT ./.
|
|
|
4212 NC_002945.4 3881626 . N . . . . GT ./.
|
|
|
4213 NC_002945.4 3881627 . N . . . . GT ./.
|
|
|
4214 NC_002945.4 3881628 . N . . . . GT ./.
|
|
|
4215 NC_002945.4 3881629 . N . . . . GT ./.
|
|
|
4216 NC_002945.4 3881630 . N . . . . GT ./.
|
|
|
4217 NC_002945.4 3881631 . N . . . . GT ./.
|
|
|
4218 NC_002945.4 3881632 . N . . . . GT ./.
|
|
|
4219 NC_002945.4 3881633 . N . . . . GT ./.
|
|
|
4220 NC_002945.4 3881634 . N . . . . GT ./.
|
|
|
4221 NC_002945.4 3881635 . N . . . . GT ./.
|
|
|
4222 NC_002945.4 3881636 . N . . . . GT ./.
|
|
|
4223 NC_002945.4 3881637 . N . . . . GT ./.
|
|
|
4224 NC_002945.4 3881638 . N . . . . GT ./.
|
|
|
4225 NC_002945.4 3881639 . N . . . . GT ./.
|
|
|
4226 NC_002945.4 3881640 . N . . . . GT ./.
|
|
|
4227 NC_002945.4 3881641 . N . . . . GT ./.
|
|
|
4228 NC_002945.4 3881642 . N . . . . GT ./.
|
|
|
4229 NC_002945.4 3881643 . N . . . . GT ./.
|
|
|
4230 NC_002945.4 3881644 . N . . . . GT ./.
|
|
|
4231 NC_002945.4 3881645 . N . . . . GT ./.
|
|
|
4232 NC_002945.4 3881646 . N . . . . GT ./.
|
|
|
4233 NC_002945.4 3881647 . N . . . . GT ./.
|
|
|
4234 NC_002945.4 3881648 . N . . . . GT ./.
|
|
|
4235 NC_002945.4 3881649 . N . . . . GT ./.
|
|
|
4236 NC_002945.4 3881650 . N . . . . GT ./.
|
|
|
4237 NC_002945.4 3881651 . N . . . . GT ./.
|
|
|
4238 NC_002945.4 3881652 . N . . . . GT ./.
|
|
|
4239 NC_002945.4 3881653 . N . . . . GT ./.
|
|
|
4240 NC_002945.4 3881654 . N . . . . GT ./.
|
|
|
4241 NC_002945.4 3881655 . N . . . . GT ./.
|
|
|
4242 NC_002945.4 3881656 . N . . . . GT ./.
|
|
|
4243 NC_002945.4 3881657 . N . . . . GT ./.
|
|
|
4244 NC_002945.4 3881658 . N . . . . GT ./.
|
|
|
4245 NC_002945.4 3881659 . N . . . . GT ./.
|
|
|
4246 NC_002945.4 3881660 . N . . . . GT ./.
|
|
|
4247 NC_002945.4 3881661 . N . . . . GT ./.
|
|
|
4248 NC_002945.4 3881662 . N . . . . GT ./.
|
|
|
4249 NC_002945.4 3881663 . N . . . . GT ./.
|
|
|
4250 NC_002945.4 3881664 . N . . . . GT ./.
|
|
|
4251 NC_002945.4 3881665 . N . . . . GT ./.
|
|
|
4252 NC_002945.4 3881666 . N . . . . GT ./.
|
|
|
4253 NC_002945.4 3881667 . N . . . . GT ./.
|
|
|
4254 NC_002945.4 3881668 . N . . . . GT ./.
|
|
|
4255 NC_002945.4 3881669 . N . . . . GT ./.
|
|
|
4256 NC_002945.4 3881670 . N . . . . GT ./.
|
|
|
4257 NC_002945.4 3881671 . N . . . . GT ./.
|
|
|
4258 NC_002945.4 3881672 . N . . . . GT ./.
|
|
|
4259 NC_002945.4 3881673 . N . . . . GT ./.
|
|
|
4260 NC_002945.4 3881674 . N . . . . GT ./.
|
|
|
4261 NC_002945.4 3881675 . N . . . . GT ./.
|
|
|
4262 NC_002945.4 3881676 . N . . . . GT ./.
|
|
|
4263 NC_002945.4 3881677 . N . . . . GT ./.
|
|
|
4264 NC_002945.4 3881678 . N . . . . GT ./.
|
|
|
4265 NC_002945.4 3881679 . N . . . . GT ./.
|
|
|
4266 NC_002945.4 3881680 . N . . . . GT ./.
|
|
|
4267 NC_002945.4 3881681 . N . . . . GT ./.
|
|
|
4268 NC_002945.4 3881682 . N . . . . GT ./.
|
|
|
4269 NC_002945.4 3881683 . N . . . . GT ./.
|
|
|
4270 NC_002945.4 3881684 . N . . . . GT ./.
|
|
|
4271 NC_002945.4 3881685 . N . . . . GT ./.
|
|
|
4272 NC_002945.4 3881686 . N . . . . GT ./.
|
|
|
4273 NC_002945.4 3881687 . N . . . . GT ./.
|
|
|
4274 NC_002945.4 3881688 . N . . . . GT ./.
|
|
|
4275 NC_002945.4 3881689 . N . . . . GT ./.
|
|
|
4276 NC_002945.4 3881690 . N . . . . GT ./.
|
|
|
4277 NC_002945.4 3881691 . N . . . . GT ./.
|
|
|
4278 NC_002945.4 3881692 . N . . . . GT ./.
|
|
|
4279 NC_002945.4 3881693 . N . . . . GT ./.
|
|
|
4280 NC_002945.4 3881694 . N . . . . GT ./.
|
|
|
4281 NC_002945.4 3881695 . N . . . . GT ./.
|
|
|
4282 NC_002945.4 3881696 . N . . . . GT ./.
|
|
|
4283 NC_002945.4 3881697 . N . . . . GT ./.
|
|
|
4284 NC_002945.4 3881698 . N . . . . GT ./.
|
|
|
4285 NC_002945.4 3881699 . N . . . . GT ./.
|
|
|
4286 NC_002945.4 3881700 . N . . . . GT ./.
|
|
|
4287 NC_002945.4 3881701 . N . . . . GT ./.
|
|
|
4288 NC_002945.4 3881702 . N . . . . GT ./.
|
|
|
4289 NC_002945.4 3881703 . N . . . . GT ./.
|
|
|
4290 NC_002945.4 3881704 . N . . . . GT ./.
|
|
|
4291 NC_002945.4 3881705 . N . . . . GT ./.
|
|
|
4292 NC_002945.4 3881706 . N . . . . GT ./.
|
|
|
4293 NC_002945.4 3881707 . N . . . . GT ./.
|
|
|
4294 NC_002945.4 3881708 . N . . . . GT ./.
|
|
|
4295 NC_002945.4 3881709 . N . . . . GT ./.
|
|
|
4296 NC_002945.4 3881710 . N . . . . GT ./.
|
|
|
4297 NC_002945.4 3881711 . N . . . . GT ./.
|
|
|
4298 NC_002945.4 3881712 . N . . . . GT ./.
|
|
|
4299 NC_002945.4 3881713 . N . . . . GT ./.
|
|
|
4300 NC_002945.4 3881714 . N . . . . GT ./.
|
|
|
4301 NC_002945.4 3881715 . N . . . . GT ./.
|
|
|
4302 NC_002945.4 3881716 . N . . . . GT ./.
|
|
|
4303 NC_002945.4 3881717 . N . . . . GT ./.
|
|
|
4304 NC_002945.4 3881718 . N . . . . GT ./.
|
|
|
4305 NC_002945.4 3881719 . N . . . . GT ./.
|
|
|
4306 NC_002945.4 3881720 . N . . . . GT ./.
|
|
|
4307 NC_002945.4 3881721 . N . . . . GT ./.
|
|
|
4308 NC_002945.4 3881722 . N . . . . GT ./.
|
|
|
4309 NC_002945.4 3881723 . N . . . . GT ./.
|
|
|
4310 NC_002945.4 3881724 . N . . . . GT ./.
|
|
|
4311 NC_002945.4 3881725 . N . . . . GT ./.
|
|
|
4312 NC_002945.4 3881726 . N . . . . GT ./.
|
|
|
4313 NC_002945.4 3881727 . N . . . . GT ./.
|
|
|
4314 NC_002945.4 3881728 . N . . . . GT ./.
|
|
|
4315 NC_002945.4 3881729 . N . . . . GT ./.
|
|
|
4316 NC_002945.4 3881730 . N . . . . GT ./.
|
|
|
4317 NC_002945.4 3881731 . N . . . . GT ./.
|
|
|
4318 NC_002945.4 3881732 . N . . . . GT ./.
|
|
|
4319 NC_002945.4 3881733 . N . . . . GT ./.
|
|
|
4320 NC_002945.4 3881734 . N . . . . GT ./.
|
|
|
4321 NC_002945.4 3881735 . N . . . . GT ./.
|
|
|
4322 NC_002945.4 3881736 . N . . . . GT ./.
|
|
|
4323 NC_002945.4 3881737 . N . . . . GT ./.
|
|
|
4324 NC_002945.4 3881738 . N . . . . GT ./.
|
|
|
4325 NC_002945.4 3881739 . N . . . . GT ./.
|
|
|
4326 NC_002945.4 3881740 . N . . . . GT ./.
|
|
|
4327 NC_002945.4 3881741 . N . . . . GT ./.
|
|
|
4328 NC_002945.4 3881742 . N . . . . GT ./.
|
|
|
4329 NC_002945.4 3881743 . N . . . . GT ./.
|
|
|
4330 NC_002945.4 3881744 . N . . . . GT ./.
|
|
|
4331 NC_002945.4 3881745 . N . . . . GT ./.
|
|
|
4332 NC_002945.4 3881746 . N . . . . GT ./.
|
|
|
4333 NC_002945.4 3881747 . N . . . . GT ./.
|
|
|
4334 NC_002945.4 3881748 . N . . . . GT ./.
|
|
|
4335 NC_002945.4 3881749 . N . . . . GT ./.
|
|
|
4336 NC_002945.4 3881750 . N . . . . GT ./.
|
|
|
4337 NC_002945.4 3881751 . N . . . . GT ./.
|
|
|
4338 NC_002945.4 3881752 . N . . . . GT ./.
|
|
|
4339 NC_002945.4 3881753 . N . . . . GT ./.
|
|
|
4340 NC_002945.4 3881754 . N . . . . GT ./.
|
|
|
4341 NC_002945.4 3881755 . N . . . . GT ./.
|
|
|
4342 NC_002945.4 3881756 . N . . . . GT ./.
|
|
|
4343 NC_002945.4 3881757 . N . . . . GT ./.
|
|
|
4344 NC_002945.4 3881758 . N . . . . GT ./.
|
|
|
4345 NC_002945.4 3881759 . N . . . . GT ./.
|
|
|
4346 NC_002945.4 3881760 . N . . . . GT ./.
|
|
|
4347 NC_002945.4 3881761 . N . . . . GT ./.
|
|
|
4348 NC_002945.4 3881762 . N . . . . GT ./.
|
|
|
4349 NC_002945.4 3881763 . N . . . . GT ./.
|
|
|
4350 NC_002945.4 3881764 . N . . . . GT ./.
|
|
|
4351 NC_002945.4 3881765 . N . . . . GT ./.
|
|
|
4352 NC_002945.4 3881766 . N . . . . GT ./.
|
|
|
4353 NC_002945.4 3881767 . N . . . . GT ./.
|
|
|
4354 NC_002945.4 3881768 . N . . . . GT ./.
|
|
|
4355 NC_002945.4 3881769 . N . . . . GT ./.
|
|
|
4356 NC_002945.4 3881770 . N . . . . GT ./.
|
|
|
4357 NC_002945.4 3881771 . N . . . . GT ./.
|
|
|
4358 NC_002945.4 3881772 . N . . . . GT ./.
|
|
|
4359 NC_002945.4 3881773 . N . . . . GT ./.
|
|
|
4360 NC_002945.4 3881774 . N . . . . GT ./.
|
|
|
4361 NC_002945.4 3881775 . N . . . . GT ./.
|
|
|
4362 NC_002945.4 3881776 . N . . . . GT ./.
|
|
|
4363 NC_002945.4 3881777 . N . . . . GT ./.
|
|
|
4364 NC_002945.4 3881778 . N . . . . GT ./.
|
|
|
4365 NC_002945.4 3881779 . N . . . . GT ./.
|
|
|
4366 NC_002945.4 3881780 . N . . . . GT ./.
|
|
|
4367 NC_002945.4 3881781 . N . . . . GT ./.
|
|
|
4368 NC_002945.4 3881782 . N . . . . GT ./.
|
|
|
4369 NC_002945.4 3881783 . N . . . . GT ./.
|
|
|
4370 NC_002945.4 3881784 . N . . . . GT ./.
|
|
|
4371 NC_002945.4 3881785 . N . . . . GT ./.
|
|
|
4372 NC_002945.4 3881786 . N . . . . GT ./.
|
|
|
4373 NC_002945.4 3881787 . N . . . . GT ./.
|
|
|
4374 NC_002945.4 3881788 . N . . . . GT ./.
|
|
|
4375 NC_002945.4 3881789 . N . . . . GT ./.
|
|
|
4376 NC_002945.4 3881790 . N . . . . GT ./.
|
|
|
4377 NC_002945.4 3881791 . N . . . . GT ./.
|
|
|
4378 NC_002945.4 3881792 . N . . . . GT ./.
|
|
|
4379 NC_002945.4 3881793 . N . . . . GT ./.
|
|
|
4380 NC_002945.4 3881794 . N . . . . GT ./.
|
|
|
4381 NC_002945.4 3881795 . N . . . . GT ./.
|
|
|
4382 NC_002945.4 3883512 . C T 91.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-0.664;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.87;ReadPosRankSum=-3.338;SOR=0.315 GT:AD:DP:GQ:PL 0/1:25,7:32:99:120,0,727
|
|
|
4383 NC_002945.4 3884519 . C T 716.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=0.404;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.74;MQRankSum=0.959;QD=16.29;ReadPosRankSum=-2.069;SOR=0.914 GT:AD:DP:GQ:PL 0/1:20,24:44:99:745,0,520
|
|
|
4384 NC_002945.4 3890837 . G C 561.77 . AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.38;QD=31.42;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:590,42,0
|
|
|
4385 NC_002945.4 3890839 . C A 561.77 . AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.38;QD=27.26;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:590,42,0
|
|
|
4386 NC_002945.4 3895444 . N . . . . GT ./.
|
|
|
4387 NC_002945.4 3895445 . N . . . . GT ./.
|
|
|
4388 NC_002945.4 3895446 . N . . . . GT ./.
|
|
|
4389 NC_002945.4 3895447 . N . . . . GT ./.
|
|
|
4390 NC_002945.4 3895448 . N . . . . GT ./.
|
|
|
4391 NC_002945.4 3895449 . N . . . . GT ./.
|
|
|
4392 NC_002945.4 3895450 . N . . . . GT ./.
|
|
|
4393 NC_002945.4 3895451 . N . . . . GT ./.
|
|
|
4394 NC_002945.4 3895452 . N . . . . GT ./.
|
|
|
4395 NC_002945.4 3895453 . N . . . . GT ./.
|
|
|
4396 NC_002945.4 3895454 . N . . . . GT ./.
|
|
|
4397 NC_002945.4 3895455 . N . . . . GT ./.
|
|
|
4398 NC_002945.4 3895456 . N . . . . GT ./.
|
|
|
4399 NC_002945.4 3895457 . N . . . . GT ./.
|
|
|
4400 NC_002945.4 3895458 . N . . . . GT ./.
|
|
|
4401 NC_002945.4 3895459 . N . . . . GT ./.
|
|
|
4402 NC_002945.4 3895460 . N . . . . GT ./.
|
|
|
4403 NC_002945.4 3895461 . N . . . . GT ./.
|
|
|
4404 NC_002945.4 3895462 . N . . . . GT ./.
|
|
|
4405 NC_002945.4 3895463 . N . . . . GT ./.
|
|
|
4406 NC_002945.4 3895464 . N . . . . GT ./.
|
|
|
4407 NC_002945.4 3895465 . N . . . . GT ./.
|
|
|
4408 NC_002945.4 3895466 . N . . . . GT ./.
|
|
|
4409 NC_002945.4 3895467 . N . . . . GT ./.
|
|
|
4410 NC_002945.4 3895468 . N . . . . GT ./.
|
|
|
4411 NC_002945.4 3895469 . N . . . . GT ./.
|
|
|
4412 NC_002945.4 3895470 . N . . . . GT ./.
|
|
|
4413 NC_002945.4 3895471 . N . . . . GT ./.
|
|
|
4414 NC_002945.4 3895472 . N . . . . GT ./.
|
|
|
4415 NC_002945.4 3895473 . N . . . . GT ./.
|
|
|
4416 NC_002945.4 3895474 . N . . . . GT ./.
|
|
|
4417 NC_002945.4 3895475 . N . . . . GT ./.
|
|
|
4418 NC_002945.4 3895476 . N . . . . GT ./.
|
|
|
4419 NC_002945.4 3895477 . N . . . . GT ./.
|
|
|
4420 NC_002945.4 3895478 . N . . . . GT ./.
|
|
|
4421 NC_002945.4 3895479 . N . . . . GT ./.
|
|
|
4422 NC_002945.4 3895480 . N . . . . GT ./.
|
|
|
4423 NC_002945.4 3895481 . N . . . . GT ./.
|
|
|
4424 NC_002945.4 3895482 . N . . . . GT ./.
|
|
|
4425 NC_002945.4 3895483 . N . . . . GT ./.
|
|
|
4426 NC_002945.4 3895484 . N . . . . GT ./.
|
|
|
4427 NC_002945.4 3895485 . N . . . . GT ./.
|
|
|
4428 NC_002945.4 3895486 . N . . . . GT ./.
|
|
|
4429 NC_002945.4 3895487 . N . . . . GT ./.
|
|
|
4430 NC_002945.4 3895488 . N . . . . GT ./.
|
|
|
4431 NC_002945.4 3895489 . N . . . . GT ./.
|
|
|
4432 NC_002945.4 3895490 . N . . . . GT ./.
|
|
|
4433 NC_002945.4 3895491 . N . . . . GT ./.
|
|
|
4434 NC_002945.4 3895492 . N . . . . GT ./.
|
|
|
4435 NC_002945.4 3895493 . N . . . . GT ./.
|
|
|
4436 NC_002945.4 3895494 . N . . . . GT ./.
|
|
|
4437 NC_002945.4 3895495 . N . . . . GT ./.
|
|
|
4438 NC_002945.4 3895496 . N . . . . GT ./.
|
|
|
4439 NC_002945.4 3895497 . N . . . . GT ./.
|
|
|
4440 NC_002945.4 3895498 . N . . . . GT ./.
|
|
|
4441 NC_002945.4 3895499 . N . . . . GT ./.
|
|
|
4442 NC_002945.4 3895500 . N . . . . GT ./.
|
|
|
4443 NC_002945.4 3895501 . N . . . . GT ./.
|
|
|
4444 NC_002945.4 3895502 . N . . . . GT ./.
|
|
|
4445 NC_002945.4 3895503 . N . . . . GT ./.
|
|
|
4446 NC_002945.4 3895504 . N . . . . GT ./.
|
|
|
4447 NC_002945.4 3895505 . N . . . . GT ./.
|
|
|
4448 NC_002945.4 3895506 . N . . . . GT ./.
|
|
|
4449 NC_002945.4 3895507 . N . . . . GT ./.
|
|
|
4450 NC_002945.4 3895508 . N . . . . GT ./.
|
|
|
4451 NC_002945.4 3895509 . N . . . . GT ./.
|
|
|
4452 NC_002945.4 3895510 . N . . . . GT ./.
|
|
|
4453 NC_002945.4 3895511 . N . . . . GT ./.
|
|
|
4454 NC_002945.4 3895512 . N . . . . GT ./.
|
|
|
4455 NC_002945.4 3895513 . N . . . . GT ./.
|
|
|
4456 NC_002945.4 3895514 . N . . . . GT ./.
|
|
|
4457 NC_002945.4 3895515 . N . . . . GT ./.
|
|
|
4458 NC_002945.4 3895516 . N . . . . GT ./.
|
|
|
4459 NC_002945.4 3895517 . N . . . . GT ./.
|
|
|
4460 NC_002945.4 3895518 . N . . . . GT ./.
|
|
|
4461 NC_002945.4 3895519 . N . . . . GT ./.
|
|
|
4462 NC_002945.4 3895520 . N . . . . GT ./.
|
|
|
4463 NC_002945.4 3895521 . N . . . . GT ./.
|
|
|
4464 NC_002945.4 3895522 . N . . . . GT ./.
|
|
|
4465 NC_002945.4 3895523 . N . . . . GT ./.
|
|
|
4466 NC_002945.4 3895524 . N . . . . GT ./.
|
|
|
4467 NC_002945.4 3895525 . N . . . . GT ./.
|
|
|
4468 NC_002945.4 3895526 . N . . . . GT ./.
|
|
|
4469 NC_002945.4 3895527 . N . . . . GT ./.
|
|
|
4470 NC_002945.4 3895528 . N . . . . GT ./.
|
|
|
4471 NC_002945.4 3895529 . N . . . . GT ./.
|
|
|
4472 NC_002945.4 3895565 . N . . . . GT ./.
|
|
|
4473 NC_002945.4 3895566 . N . . . . GT ./.
|
|
|
4474 NC_002945.4 3895567 . N . . . . GT ./.
|
|
|
4475 NC_002945.4 3895568 . N . . . . GT ./.
|
|
|
4476 NC_002945.4 3895569 . N . . . . GT ./.
|
|
|
4477 NC_002945.4 3895570 . N . . . . GT ./.
|
|
|
4478 NC_002945.4 3895571 . N . . . . GT ./.
|
|
|
4479 NC_002945.4 3895572 . N . . . . GT ./.
|
|
|
4480 NC_002945.4 3895573 . N . . . . GT ./.
|
|
|
4481 NC_002945.4 3895574 . N . . . . GT ./.
|
|
|
4482 NC_002945.4 3895575 . N . . . . GT ./.
|
|
|
4483 NC_002945.4 3895576 . N . . . . GT ./.
|
|
|
4484 NC_002945.4 3895577 . N . . . . GT ./.
|
|
|
4485 NC_002945.4 3895578 . N . . . . GT ./.
|
|
|
4486 NC_002945.4 3895579 . N . . . . GT ./.
|
|
|
4487 NC_002945.4 3895580 . N . . . . GT ./.
|
|
|
4488 NC_002945.4 3895581 . N . . . . GT ./.
|
|
|
4489 NC_002945.4 3895582 . N . . . . GT ./.
|
|
|
4490 NC_002945.4 3895583 . N . . . . GT ./.
|
|
|
4491 NC_002945.4 3895584 . N . . . . GT ./.
|
|
|
4492 NC_002945.4 3895585 . N . . . . GT ./.
|
|
|
4493 NC_002945.4 3895586 . N . . . . GT ./.
|
|
|
4494 NC_002945.4 3895587 . N . . . . GT ./.
|
|
|
4495 NC_002945.4 3895588 . N . . . . GT ./.
|
|
|
4496 NC_002945.4 3895589 . N . . . . GT ./.
|
|
|
4497 NC_002945.4 3895590 . N . . . . GT ./.
|
|
|
4498 NC_002945.4 3895591 . N . . . . GT ./.
|
|
|
4499 NC_002945.4 3895592 . N . . . . GT ./.
|
|
|
4500 NC_002945.4 3895593 . N . . . . GT ./.
|
|
|
4501 NC_002945.4 3895594 . N . . . . GT ./.
|
|
|
4502 NC_002945.4 3895595 . N . . . . GT ./.
|
|
|
4503 NC_002945.4 3895596 . N . . . . GT ./.
|
|
|
4504 NC_002945.4 3895597 . N . . . . GT ./.
|
|
|
4505 NC_002945.4 3895598 . N . . . . GT ./.
|
|
|
4506 NC_002945.4 3895599 . N . . . . GT ./.
|
|
|
4507 NC_002945.4 3895600 . N . . . . GT ./.
|
|
|
4508 NC_002945.4 3895601 . N . . . . GT ./.
|
|
|
4509 NC_002945.4 3895602 . N . . . . GT ./.
|
|
|
4510 NC_002945.4 3895603 . N . . . . GT ./.
|
|
|
4511 NC_002945.4 3895604 . N . . . . GT ./.
|
|
|
4512 NC_002945.4 3895605 . N . . . . GT ./.
|
|
|
4513 NC_002945.4 3895606 . N . . . . GT ./.
|
|
|
4514 NC_002945.4 3895607 . N . . . . GT ./.
|
|
|
4515 NC_002945.4 3895608 . N . . . . GT ./.
|
|
|
4516 NC_002945.4 3895609 . N . . . . GT ./.
|
|
|
4517 NC_002945.4 3895610 . N . . . . GT ./.
|
|
|
4518 NC_002945.4 3895611 . N . . . . GT ./.
|
|
|
4519 NC_002945.4 3895612 . N . . . . GT ./.
|
|
|
4520 NC_002945.4 3895613 . N . . . . GT ./.
|
|
|
4521 NC_002945.4 3895614 . N . . . . GT ./.
|
|
|
4522 NC_002945.4 3895615 . N . . . . GT ./.
|
|
|
4523 NC_002945.4 3895616 . N . . . . GT ./.
|
|
|
4524 NC_002945.4 3895617 . N . . . . GT ./.
|
|
|
4525 NC_002945.4 3895618 . N . . . . GT ./.
|
|
|
4526 NC_002945.4 3895619 . N . . . . GT ./.
|
|
|
4527 NC_002945.4 3895620 . N . . . . GT ./.
|
|
|
4528 NC_002945.4 3895621 . N . . . . GT ./.
|
|
|
4529 NC_002945.4 3895622 . N . . . . GT ./.
|
|
|
4530 NC_002945.4 3895623 . N . . . . GT ./.
|
|
|
4531 NC_002945.4 3895624 . N . . . . GT ./.
|
|
|
4532 NC_002945.4 3895625 . N . . . . GT ./.
|
|
|
4533 NC_002945.4 3895626 . N . . . . GT ./.
|
|
|
4534 NC_002945.4 3895627 . N . . . . GT ./.
|
|
|
4535 NC_002945.4 3895628 . N . . . . GT ./.
|
|
|
4536 NC_002945.4 3895629 . N . . . . GT ./.
|
|
|
4537 NC_002945.4 3895630 . N . . . . GT ./.
|
|
|
4538 NC_002945.4 3895631 . N . . . . GT ./.
|
|
|
4539 NC_002945.4 3895632 . N . . . . GT ./.
|
|
|
4540 NC_002945.4 3895633 . N . . . . GT ./.
|
|
|
4541 NC_002945.4 3895634 . N . . . . GT ./.
|
|
|
4542 NC_002945.4 3895635 . N . . . . GT ./.
|
|
|
4543 NC_002945.4 3895636 . N . . . . GT ./.
|
|
|
4544 NC_002945.4 3895637 . N . . . . GT ./.
|
|
|
4545 NC_002945.4 3895638 . N . . . . GT ./.
|
|
|
4546 NC_002945.4 3895639 . N . . . . GT ./.
|
|
|
4547 NC_002945.4 3895640 . N . . . . GT ./.
|
|
|
4548 NC_002945.4 3895641 . N . . . . GT ./.
|
|
|
4549 NC_002945.4 3895642 . N . . . . GT ./.
|
|
|
4550 NC_002945.4 3895643 . N . . . . GT ./.
|
|
|
4551 NC_002945.4 3895644 . N . . . . GT ./.
|
|
|
4552 NC_002945.4 3895645 . N . . . . GT ./.
|
|
|
4553 NC_002945.4 3895646 . N . . . . GT ./.
|
|
|
4554 NC_002945.4 3895647 . N . . . . GT ./.
|
|
|
4555 NC_002945.4 3895648 . N . . . . GT ./.
|
|
|
4556 NC_002945.4 3895649 . N . . . . GT ./.
|
|
|
4557 NC_002945.4 3895650 . N . . . . GT ./.
|
|
|
4558 NC_002945.4 3895651 . N . . . . GT ./.
|
|
|
4559 NC_002945.4 3895652 . N . . . . GT ./.
|
|
|
4560 NC_002945.4 3895653 . N . . . . GT ./.
|
|
|
4561 NC_002945.4 3895654 . N . . . . GT ./.
|
|
|
4562 NC_002945.4 3895655 . N . . . . GT ./.
|
|
|
4563 NC_002945.4 3895656 . N . . . . GT ./.
|
|
|
4564 NC_002945.4 3895657 . N . . . . GT ./.
|
|
|
4565 NC_002945.4 3895658 . N . . . . GT ./.
|
|
|
4566 NC_002945.4 3895659 . N . . . . GT ./.
|
|
|
4567 NC_002945.4 3895660 . N . . . . GT ./.
|
|
|
4568 NC_002945.4 3895714 . N . . . . GT ./.
|
|
|
4569 NC_002945.4 3895715 . N . . . . GT ./.
|
|
|
4570 NC_002945.4 3895716 . N . . . . GT ./.
|
|
|
4571 NC_002945.4 3895717 . N . . . . GT ./.
|
|
|
4572 NC_002945.4 3895718 . N . . . . GT ./.
|
|
|
4573 NC_002945.4 3895719 . N . . . . GT ./.
|
|
|
4574 NC_002945.4 3895720 . N . . . . GT ./.
|
|
|
4575 NC_002945.4 3895721 . N . . . . GT ./.
|
|
|
4576 NC_002945.4 3895722 . N . . . . GT ./.
|
|
|
4577 NC_002945.4 3895723 . N . . . . GT ./.
|
|
|
4578 NC_002945.4 3895724 . N . . . . GT ./.
|
|
|
4579 NC_002945.4 3895725 . N . . . . GT ./.
|
|
|
4580 NC_002945.4 3895726 . N . . . . GT ./.
|
|
|
4581 NC_002945.4 3895727 . N . . . . GT ./.
|
|
|
4582 NC_002945.4 3895728 . N . . . . GT ./.
|
|
|
4583 NC_002945.4 3895729 . N . . . . GT ./.
|
|
|
4584 NC_002945.4 3895730 . N . . . . GT ./.
|
|
|
4585 NC_002945.4 3895731 . N . . . . GT ./.
|
|
|
4586 NC_002945.4 3895732 . N . . . . GT ./.
|
|
|
4587 NC_002945.4 3895733 . N . . . . GT ./.
|
|
|
4588 NC_002945.4 3895734 . N . . . . GT ./.
|
|
|
4589 NC_002945.4 3895735 . N . . . . GT ./.
|
|
|
4590 NC_002945.4 3895736 . N . . . . GT ./.
|
|
|
4591 NC_002945.4 3895737 . N . . . . GT ./.
|
|
|
4592 NC_002945.4 3895738 . N . . . . GT ./.
|
|
|
4593 NC_002945.4 3895739 . N . . . . GT ./.
|
|
|
4594 NC_002945.4 3895740 . N . . . . GT ./.
|
|
|
4595 NC_002945.4 3895741 . N . . . . GT ./.
|
|
|
4596 NC_002945.4 3895742 . N . . . . GT ./.
|
|
|
4597 NC_002945.4 3895743 . N . . . . GT ./.
|
|
|
4598 NC_002945.4 3895744 . N . . . . GT ./.
|
|
|
4599 NC_002945.4 3895745 . N . . . . GT ./.
|
|
|
4600 NC_002945.4 3895746 . N . . . . GT ./.
|
|
|
4601 NC_002945.4 3895747 . N . . . . GT ./.
|
|
|
4602 NC_002945.4 3895748 . N . . . . GT ./.
|
|
|
4603 NC_002945.4 3895749 . N . . . . GT ./.
|
|
|
4604 NC_002945.4 3895750 . N . . . . GT ./.
|
|
|
4605 NC_002945.4 3895751 . N . . . . GT ./.
|
|
|
4606 NC_002945.4 3895752 . N . . . . GT ./.
|
|
|
4607 NC_002945.4 3895753 . N . . . . GT ./.
|
|
|
4608 NC_002945.4 3895754 . N . . . . GT ./.
|
|
|
4609 NC_002945.4 3895755 . N . . . . GT ./.
|
|
|
4610 NC_002945.4 3895756 . N . . . . GT ./.
|
|
|
4611 NC_002945.4 3895757 . N . . . . GT ./.
|
|
|
4612 NC_002945.4 3895758 . N . . . . GT ./.
|
|
|
4613 NC_002945.4 3895759 . N . . . . GT ./.
|
|
|
4614 NC_002945.4 3895760 . N . . . . GT ./.
|
|
|
4615 NC_002945.4 3895761 . N . . . . GT ./.
|
|
|
4616 NC_002945.4 3895762 . N . . . . GT ./.
|
|
|
4617 NC_002945.4 3895763 . N . . . . GT ./.
|
|
|
4618 NC_002945.4 3895764 . N . . . . GT ./.
|
|
|
4619 NC_002945.4 3895765 . N . . . . GT ./.
|
|
|
4620 NC_002945.4 3895766 . N . . . . GT ./.
|
|
|
4621 NC_002945.4 3895767 . N . . . . GT ./.
|
|
|
4622 NC_002945.4 3895768 . N . . . . GT ./.
|
|
|
4623 NC_002945.4 3895769 . N . . . . GT ./.
|
|
|
4624 NC_002945.4 3895770 . N . . . . GT ./.
|
|
|
4625 NC_002945.4 3895771 . N . . . . GT ./.
|
|
|
4626 NC_002945.4 3895772 . N . . . . GT ./.
|
|
|
4627 NC_002945.4 3895773 . N . . . . GT ./.
|
|
|
4628 NC_002945.4 3895774 . N . . . . GT ./.
|
|
|
4629 NC_002945.4 3895775 . N . . . . GT ./.
|
|
|
4630 NC_002945.4 3895776 . N . . . . GT ./.
|
|
|
4631 NC_002945.4 3895777 . N . . . . GT ./.
|
|
|
4632 NC_002945.4 3895778 . N . . . . GT ./.
|
|
|
4633 NC_002945.4 3895779 . N . . . . GT ./.
|
|
|
4634 NC_002945.4 3895780 . N . . . . GT ./.
|
|
|
4635 NC_002945.4 3895781 . N . . . . GT ./.
|
|
|
4636 NC_002945.4 3895782 . N . . . . GT ./.
|
|
|
4637 NC_002945.4 3895783 . N . . . . GT ./.
|
|
|
4638 NC_002945.4 3895784 . N . . . . GT ./.
|
|
|
4639 NC_002945.4 3895785 . N . . . . GT ./.
|
|
|
4640 NC_002945.4 3895786 . N . . . . GT ./.
|
|
|
4641 NC_002945.4 3895787 . N . . . . GT ./.
|
|
|
4642 NC_002945.4 3895788 . N . . . . GT ./.
|
|
|
4643 NC_002945.4 3895789 . N . . . . GT ./.
|
|
|
4644 NC_002945.4 3895790 . N . . . . GT ./.
|
|
|
4645 NC_002945.4 3895791 . N . . . . GT ./.
|
|
|
4646 NC_002945.4 3895792 . N . . . . GT ./.
|
|
|
4647 NC_002945.4 3895793 . N . . . . GT ./.
|
|
|
4648 NC_002945.4 3895794 . N . . . . GT ./.
|
|
|
4649 NC_002945.4 3895795 . N . . . . GT ./.
|
|
|
4650 NC_002945.4 3895796 . N . . . . GT ./.
|
|
|
4651 NC_002945.4 3895797 . N . . . . GT ./.
|
|
|
4652 NC_002945.4 3895798 . N . . . . GT ./.
|
|
|
4653 NC_002945.4 3895799 . N . . . . GT ./.
|
|
|
4654 NC_002945.4 3895800 . N . . . . GT ./.
|
|
|
4655 NC_002945.4 3895801 . N . . . . GT ./.
|
|
|
4656 NC_002945.4 3896539 . A G 164.90 . AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=34.25;QD=32.98;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:193,15,0
|
|
|
4657 NC_002945.4 3906770 . C T 5466.77 . AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.16;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,170:170:99:5495,509,0
|
|
|
4658 NC_002945.4 3940591 . G A 7541.77 . AC=2;AF=1.00;AN=2;DP=258;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.46;SOR=1.054 GT:AD:DP:GQ:PL 1/1:0,256:256:99:7570,756,0
|
|
|
4659 NC_002945.4 3957298 . C T 9044.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=2.521;ClippingRankSum=0.000;DP=322;ExcessHet=3.0103;FS=15.769;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.26;ReadPosRankSum=3.171;SOR=0.834 GT:AD:DP:GQ:PL 1/1:4,316:320:99:9073,882,0
|
|
|
4660 NC_002945.4 3969490 . T C 6753.77 . AC=2;AF=1.00;AN=2;DP=210;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.16;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,210:210:99:6782,626,0
|
|
|
4661 NC_002945.4 3993821 . T C 8334.77 . AC=2;AF=1.00;AN=2;DP=271;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,271:271:99:8363,809,0
|
|
|
4662 NC_002945.4 4008056 . G A 5994.77 . AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6023,579,0
|
|
|
4663 NC_002945.4 4010760 . T C 5156.77 . AC=2;AF=1.00;AN=2;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.15;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,151:151:99:5185,453,0
|
|
|
4664 NC_002945.4 4024996 . A C 63.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-4.933;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=19.996;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=1.08;ReadPosRankSum=2.151;SOR=3.662 GT:AD:DP:GQ:PL 0/1:37,22:59:92:92,0,585
|
|
|
4665 NC_002945.4 4046956 . G A 6476.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.970;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.91;ReadPosRankSum=1.773;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,202:203:99:6505,584,0
|
|
|
4666 NC_002945.4 4068671 . G A 6919.77 . AC=2;AF=1.00;AN=2;DP=231;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.96;SOR=1.041 GT:AD:DP:GQ:PL 1/1:0,231:231:99:6948,689,0
|
|
|
4667 NC_002945.4 4074794 . A C 6244.77 . AC=2;AF=1.00;AN=2;DP=202;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.22;SOR=1.847 GT:AD:DP:GQ:PL 1/1:0,200:200:99:6273,594,0
|
|
|
4668 NC_002945.4 4085392 . A G 4516.77 . AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,149:149:99:4545,441,0
|
|
|
4669 NC_002945.4 4096612 . T G 11191.77 . AC=2;AF=1.00;AN=2;DP=341;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,341:341:99:11220,1023,0
|
|
|
4670 NC_002945.4 4103835 . G A 6646.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=0.946;ClippingRankSum=0.000;DP=237;ExcessHet=3.0103;FS=3.029;MLEAC=2;MLEAF=1.00;MQ=59.94;MQRankSum=0.000;QD=28.16;ReadPosRankSum=-0.509;SOR=0.136 GT:AD:DP:GQ:PL 1/1:2,234:236:99:6675,660,0
|
|
|
4671 NC_002945.4 4107438 . G A 4613.77 . AC=2;AF=1.00;AN=2;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,171:171:99:4642,497,0
|
|
|
4672 NC_002945.4 4130927 . A C 5188.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.757;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.29;ReadPosRankSum=-0.468;SOR=0.328 GT:AD:DP:GQ:PL 1/1:1,144:145:99:5217,425,0
|
|
|
4673 NC_002945.4 4134821 . A G 6290.77 . AC=2;AF=1.00;AN=2;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,197:197:99:6319,587,0
|
|
|
4674 NC_002945.4 4141435 . G A 5600.77 . AC=2;AF=1.00;AN=2;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,175:175:99:5629,522,0
|
|
|
4675 NC_002945.4 4149101 . C A 9229.77 . AC=2;AF=1.00;AN=2;DP=312;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.58;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,312:312:99:9258,930,0
|
|
|
4676 NC_002945.4 4160782 . A G 9075.77 . AC=2;AF=1.00;AN=2;DP=291;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.30;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,290:290:99:9104,865,0
|
|
|
4677 NC_002945.4 4162554 . T C 4465.77 . AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=1.290 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4494,410,0
|
|
|
4678 NC_002945.4 4164400 . G A 4598.77 . AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.86;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4627,459,0
|
|
|
4679 NC_002945.4 4180986 . A G 8726.77 . AC=2;AF=1.00;AN=2;DP=275;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.73;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,275:275:99:8755,823,0
|
|
|
4680 NC_002945.4 4191866 . G A 7953.77 . AC=2;AF=1.00;AN=2;DP=264;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.24;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,263:263:99:7982,787,0
|
|
|
4681 NC_002945.4 4216874 . T C 9061.77 . AC=2;AF=1.00;AN=2;DP=291;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=0.847 GT:AD:DP:GQ:PL 1/1:0,291:291:99:9090,867,0
|
|
|
4682 NC_002945.4 4227712 . A C 458.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-6.260;ClippingRankSum=0.000;DP=204;ExcessHet=3.0103;FS=261.811;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.29;ReadPosRankSum=1.652;SOR=7.475 GT:AD:DP:GQ:PL 0/1:159,41:200:99:487,0,8014
|
|
|
4683 NC_002945.4 4227718 . A C 485.77 . AC=1;AF=0.500;AN=2;BaseQRankSum=-6.380;ClippingRankSum=0.000;DP=208;ExcessHet=3.0103;FS=342.008;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.38;ReadPosRankSum=-1.065;SOR=7.902 GT:AD:DP:GQ:PL 0/1:153,51:204:99:514,0,7786
|
|
|
4684 NC_002945.4 4259281 . T C 2555.77 . AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=39.46;QD=32.52;SOR=8.318 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2584,188,0
|
|
|
4685 NC_002945.4 4290384 . G A 8603.77 . AC=2;AF=1.00;AN=2;DP=269;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.98;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,269:269:99:8632,803,0
|
|
|
4686 NC_002945.4 4293956 . N . . . . GT ./.
|
|
|
4687 NC_002945.4 4293957 . N . . . . GT ./.
|
|
|
4688 NC_002945.4 4293958 . N . . . . GT ./.
|
|
|
4689 NC_002945.4 4293959 . N . . . . GT ./.
|
|
|
4690 NC_002945.4 4293960 . N . . . . GT ./.
|
|
|
4691 NC_002945.4 4293961 . N . . . . GT ./.
|
|
|
4692 NC_002945.4 4293962 . N . . . . GT ./.
|
|
|
4693 NC_002945.4 4293963 . N . . . . GT ./.
|
|
|
4694 NC_002945.4 4293964 . N . . . . GT ./.
|
|
|
4695 NC_002945.4 4293965 . N . . . . GT ./.
|
|
|
4696 NC_002945.4 4293966 . N . . . . GT ./.
|
|
|
4697 NC_002945.4 4293967 . N . . . . GT ./.
|
|
|
4698 NC_002945.4 4293968 . N . . . . GT ./.
|
|
|
4699 NC_002945.4 4293969 . N . . . . GT ./.
|
|
|
4700 NC_002945.4 4293970 . N . . . . GT ./.
|
|
|
4701 NC_002945.4 4293971 . N . . . . GT ./.
|
|
|
4702 NC_002945.4 4293972 . N . . . . GT ./.
|
|
|
4703 NC_002945.4 4293973 . N . . . . GT ./.
|
|
|
4704 NC_002945.4 4294036 . N . . . . GT ./.
|
|
|
4705 NC_002945.4 4294037 . N . . . . GT ./.
|
|
|
4706 NC_002945.4 4294038 . N . . . . GT ./.
|
|
|
4707 NC_002945.4 4294039 . N . . . . GT ./.
|
|
|
4708 NC_002945.4 4294040 . N . . . . GT ./.
|
|
|
4709 NC_002945.4 4294041 . N . . . . GT ./.
|
|
|
4710 NC_002945.4 4294042 . N . . . . GT ./.
|
|
|
4711 NC_002945.4 4294043 . N . . . . GT ./.
|
|
|
4712 NC_002945.4 4294044 . N . . . . GT ./.
|
|
|
4713 NC_002945.4 4294045 . N . . . . GT ./.
|
|
|
4714 NC_002945.4 4294046 . N . . . . GT ./.
|
|
|
4715 NC_002945.4 4294047 . N . . . . GT ./.
|
|
|
4716 NC_002945.4 4294048 . N . . . . GT ./.
|
|
|
4717 NC_002945.4 4294049 . N . . . . GT ./.
|
|
|
4718 NC_002945.4 4294050 . N . . . . GT ./.
|
|
|
4719 NC_002945.4 4294051 . N . . . . GT ./.
|
|
|
4720 NC_002945.4 4294052 . N . . . . GT ./.
|
|
|
4721 NC_002945.4 4294053 . N . . . . GT ./.
|
|
|
4722 NC_002945.4 4294054 . N . . . . GT ./.
|
|
|
4723 NC_002945.4 4294055 . N . . . . GT ./.
|
|
|
4724 NC_002945.4 4294056 . N . . . . GT ./.
|
|
|
4725 NC_002945.4 4294057 . N . . . . GT ./.
|
|
|
4726 NC_002945.4 4294058 . N . . . . GT ./.
|
|
|
4727 NC_002945.4 4294059 . N . . . . GT ./.
|
|
|
4728 NC_002945.4 4294060 . N . . . . GT ./.
|
|
|
4729 NC_002945.4 4294061 . N . . . . GT ./.
|
|
|
4730 NC_002945.4 4294062 . N . . . . GT ./.
|
|
|
4731 NC_002945.4 4294063 . N . . . . GT ./.
|
|
|
4732 NC_002945.4 4294064 . N . . . . GT ./.
|
|
|
4733 NC_002945.4 4294065 . N . . . . GT ./.
|
|
|
4734 NC_002945.4 4294066 . N . . . . GT ./.
|
|
|
4735 NC_002945.4 4294067 . N . . . . GT ./.
|
|
|
4736 NC_002945.4 4294068 . N . . . . GT ./.
|
|
|
4737 NC_002945.4 4294069 . N . . . . GT ./.
|
|
|
4738 NC_002945.4 4294070 . N . . . . GT ./.
|
|
|
4739 NC_002945.4 4294071 . N . . . . GT ./.
|
|
|
4740 NC_002945.4 4294072 . N . . . . GT ./.
|
|
|
4741 NC_002945.4 4294073 . N . . . . GT ./.
|
|
|
4742 NC_002945.4 4294074 . N . . . . GT ./.
|
|
|
4743 NC_002945.4 4294075 . N . . . . GT ./.
|
|
|
4744 NC_002945.4 4294076 . N . . . . GT ./.
|
|
|
4745 NC_002945.4 4294077 . N . . . . GT ./.
|
|
|
4746 NC_002945.4 4294078 . N . . . . GT ./.
|
|
|
4747 NC_002945.4 4294079 . N . . . . GT ./.
|
|
|
4748 NC_002945.4 4294080 . N . . . . GT ./.
|
|
|
4749 NC_002945.4 4294081 . N . . . . GT ./.
|
|
|
4750 NC_002945.4 4294082 . N . . . . GT ./.
|
|
|
4751 NC_002945.4 4294083 . N . . . . GT ./.
|
|
|
4752 NC_002945.4 4294084 . N . . . . GT ./.
|
|
|
4753 NC_002945.4 4294085 . N . . . . GT ./.
|
|
|
4754 NC_002945.4 4294086 . N . . . . GT ./.
|
|
|
4755 NC_002945.4 4294087 . N . . . . GT ./.
|
|
|
4756 NC_002945.4 4294088 . N . . . . GT ./.
|
|
|
4757 NC_002945.4 4294089 . N . . . . GT ./.
|
|
|
4758 NC_002945.4 4294090 . N . . . . GT ./.
|
|
|
4759 NC_002945.4 4294091 . N . . . . GT ./.
|
|
|
4760 NC_002945.4 4294092 . N . . . . GT ./.
|
|
|
4761 NC_002945.4 4294093 . N . . . . GT ./.
|
|
|
4762 NC_002945.4 4294094 . N . . . . GT ./.
|
|
|
4763 NC_002945.4 4294095 . N . . . . GT ./.
|
|
|
4764 NC_002945.4 4294096 . N . . . . GT ./.
|
|
|
4765 NC_002945.4 4294097 . N . . . . GT ./.
|
|
|
4766 NC_002945.4 4294098 . N . . . . GT ./.
|
|
|
4767 NC_002945.4 4295589 . T C 8009.77 . AC=2;AF=1.00;AN=2;DP=275;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.13;SOR=0.700 GT:AD:DP:GQ:PL 1/1:0,275:275:99:8038,817,0
|
|
|
4768 NC_002945.4 4298265 . T C 7653.77 . AC=2;AF=1.00;AN=2;DP=231;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.184 GT:AD:DP:GQ:PL 1/1:0,231:231:99:7682,691,0
|
|
|
4769 NC_002945.4 4305930 . G A 11064.77 . AC=2;AF=1.00;AN=2;BaseQRankSum=1.945;ClippingRankSum=0.000;DP=375;ExcessHet=3.0103;FS=3.742;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.58;ReadPosRankSum=2.757;SOR=0.759 GT:AD:DP:GQ:PL 1/1:1,373:374:99:11093,1107,0
|
|
|
4770 NC_002945.4 4310050 . T C 4680.77 . AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.03;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,167:167:99:4709,495,0
|
|
|
4771 NC_002945.4 4311425 . C T 8707.77 . AC=2;AF=1.00;AN=2;DP=283;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.77;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,283:283:99:8736,845,0
|
|
|
4772 NC_002945.4 4319929 . C T 4627.77 . AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.05;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4656,456,0
|
|
|
4773 NC_002945.4 4321337 . T C 7652.77 . AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,237:237:99:7681,710,0
|
|
|
4774 NC_002945.4 4323997 . C A 4754.77 . AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4783,441,0
|
|
|
4775 NC_002945.4 4327440 . G C 5191.77 . AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,167:167:99:5220,496,0
|
|
|
4776 NC_002945.4 4339036 . T G 7016.77 . AC=2;AF=1.00;AN=2;DP=225;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.19;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,225:225:99:7045,672,0
|
