view macros.xml @ 23:b34843f09f9f draft

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<?xml version='1.0' encoding='UTF-8'?>
<macros>
    <token name="@WRAPPER_VERSION@">1.0</token>
    <token name="@PROFILE@">20.09</token>
    <xml name="biopython_requirement">
        <requirement type="package" version="1.79">biopython</requirement>
    </xml>
    <xml name="numpy_requirement">
        <requirement type="package" version="1.21.1">numpy</requirement>
    </xml>
    <xml name="openpyxl_requirement">
        <requirement type="package" version="3.0.7">openpyxl</requirement>
    </xml>
    <xml name="pandas_requirement">
        <requirement type="package" version="1.3.0">pandas</requirement>
    </xml>
    <xml name="pysam_requirement">
        <requirement type="package" version="0.15.4">pysam</requirement>
    </xml>
    <xml name="pyvcf_requirement">
        <requirement type="package" version="0.6.8">pyvcf</requirement>
    </xml>
    <xml name="pyyaml_requirement">
        <requirement type="package" version="5.4.1">pyyaml</requirement>
    </xml>
    <xml name="xlrd_requirement">
        <requirement type="package" version="2.0.1">xlrd</requirement>
    </xml>
    <xml name="xlsxwriter_requirement">
        <requirement type="package" version="1.4.4">xlsxwriter</requirement>
    </xml>
    <xml name="param_reference_source">
        <param name="reference_source" type="select" label="Choose the source for the reference genome">
            <option value="cached" selected="true">locally cached</option>
            <option value="history">from history</option>
        </param>
    </xml>
    <xml name="citations">
        <citations>
            <citation type="bibtex">
                @misc{None,
                journal = {None},
                author = {1. Stuber T},
                title = {Manuscript in preparation},
                year = {None},
                url = {https://github.com/USDA-VS/vSNP},}
            </citation>
        </citations>
    </xml>
</macros>