annotate run_tests.sh @ 4:a4c6fcf2c456 draft

"planemo upload commit 0584e8878deaf91614c6bb3c0122975300132c25"
author gregor.m
date Thu, 26 Nov 2020 16:40:47 +0000
parents 4d7f30a7e2f6
children d5a4180410c4
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
1d62de03829d "planemo upload commit c6cd06d44dce1eef9136017289d362f144687dc1"
gregor.m
parents:
diff changeset
1 #!/usr/bin/env bash
1d62de03829d "planemo upload commit c6cd06d44dce1eef9136017289d362f144687dc1"
gregor.m
parents:
diff changeset
2
1d62de03829d "planemo upload commit c6cd06d44dce1eef9136017289d362f144687dc1"
gregor.m
parents:
diff changeset
3
1d62de03829d "planemo upload commit c6cd06d44dce1eef9136017289d362f144687dc1"
gregor.m
parents:
diff changeset
4 INPUT_PATH='./test-data/test-movie.tif'
1d62de03829d "planemo upload commit c6cd06d44dce1eef9136017289d362f144687dc1"
gregor.m
parents:
diff changeset
5 SCRIPT_PATH='.'
1d62de03829d "planemo upload commit c6cd06d44dce1eef9136017289d362f144687dc1"
gregor.m
parents:
diff changeset
6
4
a4c6fcf2c456 "planemo upload commit 0584e8878deaf91614c6bb3c0122975300132c25"
gregor.m
parents: 3
diff changeset
7 python3 $SCRIPT_PATH/spyboat_cli.py --input_path $INPUT_PATH --phase_out phase_test-movie.tif --period_out period_test-movie.tif --power_out power_test-movie.tif --amplitude_out amplitude_test-movie.tif --dt 1 --Tmin 20 --Tmax 30 --nT 200 --ncpu 6 --masking dynamic --preprocessed_out preproc_two_sines.tif --gauss_sigma 2 --rescale 80 --Tcutoff 40 --masking static --mask_frame 10 --mask_thresh 300
0
1d62de03829d "planemo upload commit c6cd06d44dce1eef9136017289d362f144687dc1"
gregor.m
parents:
diff changeset
8
1d62de03829d "planemo upload commit c6cd06d44dce1eef9136017289d362f144687dc1"
gregor.m
parents:
diff changeset
9 printf "\n"
1d62de03829d "planemo upload commit c6cd06d44dce1eef9136017289d362f144687dc1"
gregor.m
parents:
diff changeset
10 # printf "\nError examples:\n"
1d62de03829d "planemo upload commit c6cd06d44dce1eef9136017289d362f144687dc1"
gregor.m
parents:
diff changeset
11