diff run_tests.sh @ 0:1d62de03829d draft

"planemo upload commit c6cd06d44dce1eef9136017289d362f144687dc1"

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/run_tests.sh	Mon Nov 23 13:31:47 2020 +0000
@@ -0,0 +1,15 @@
+#!/usr/bin/env bash
+
+# example command, minimal options: no detrending,
+# no rescaling, no masking, no amplitude norm., no blurring
+
+INPUT_PATH='./test-data/test-movie.tif'
+# INPUT_PATH='./test-data/SCN_L20_Evans2013-half.tif'
+SCRIPT_PATH='.'
+
+python3 $SCRIPT_PATH/cl_wrapper.py --input_path $INPUT_PATH --phase_out phase_twosines_out.tif --period_out period_twosines_out.tif --power_out power_twosines_out.tif  --amplitude_out amplitude_twosines_out.tif --dt .5 --Tmin 20 --Tmax 30 --nT 200 --ncpu 6 --masking dynamic --preprocessed_out preproc_two_sines.tif --gauss_sigma 3 --rescale 50 --Tcutoff 40 --masking fixed --mask_frame 10 --mask_thresh 8
+
+printf "\n"
+# printf "\nError examples:\n"
+
+# python3 $SCRIPT_PATH/cl_wrapper.py --input_path $INPUT_PATH --phase_out phase_twosines_out.tif --period_out period_twosines_out.tif --power_out power_twosines_out.tif  --amplitude_out amplitude_twosines_out.tif --dt 2. --Tmin 20 --Tmax 30 --nT 200 --ncpu 6 --save_input True --masking fixed