view run_tests.sh @ 3:4d7f30a7e2f6 draft

"planemo upload commit d070f1ba04a5141a65487f45b29c22767639e44b"

#!/usr/bin/env bash


INPUT_PATH='./test-data/test-movie.tif'
SCRIPT_PATH='.'

python3 $SCRIPT_PATH/spyboat_cli.py --input_path $INPUT_PATH --phase_out phase_twosines_out.tif --period_out period_twosines_out.tif --power_out power_twosines_out.tif  --amplitude_out amplitude_twosines_out.tif --dt 1 --Tmin 2 --Tmax 30 --nT 200 --ncpu 6 --masking dynamic --preprocessed_out preproc_two_sines.tif --gauss_sigma 3 --rescale 80 --Tcutoff 40 --masking static --mask_frame 10 --mask_thresh 8

printf "\n"
# printf "\nError examples:\n"

# python3 $SCRIPT_PATH/cl_wrapper.py --input_path $INPUT_PATH --phase_out phase_twosines_out.tif --period_out period_twosines_out.tif --power_out power_twosines_out.tif  --amplitude_out amplitude_twosines_out.tif --dt 2. --Tmin 20 --Tmax 30 --nT 200 --ncpu 6 --save_input True --masking fixed