comparison chartskit.xml @ 32:e915224afc1d draft

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author guerler
date Mon, 07 Apr 2014 19:24:08 -0400
parents 726effc0bcbd
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31:7774e0097ff4 32:e915224afc1d
3 <description>wrapper for R</description> 3 <description>wrapper for R</description>
4 <requirements> 4 <requirements>
5 <requirement type="set_environment">SCRIPT_PATH</requirement> 5 <requirement type="set_environment">SCRIPT_PATH</requirement>
6 <requirement type="package" version="2.15.0">R</requirement> 6 <requirement type="package" version="2.15.0">R</requirement>
7 </requirements> 7 </requirements>
8 <command>Rscript \$SCRIPT_PATH/chartskit.r -m \$SCRIPT_PATH/${module}.r -i ${input} -c '${columns}' -s '${settings}' -o ${output} 8 <command>Rscript \$SCRIPT_PATH/chartskit.r -w \$SCRIPT_PATH/ -m ${module} -i ${input} -c '${columns}' -s '${settings}' -o ${output}
9 </command> 9 </command>
10 <inputs> 10 <inputs>
11 <param name="input" type="data" label="Input dataset" format="tabular" /> 11 <param name="input" type="data" label="Input dataset" format="tabular" />
12 <param name="module" type="select" label="R-script"> 12 <param name="module" type="select" label="R-script">
13 <option value="histogram">Histogram</option> 13 <option value="histogram">Histogram</option>
14 <option value="boxplot">Box plot</option>
14 </param> 15 </param>
15 <param name="columns" type="text" label="Columns string (i.e key1: column, key2: column)" value="column: 2"/> 16 <param name="columns" type="text" label="Columns string (i.e key1: column, key2: column)" value="column: 2"/>
16 <param name="settings" type="text" label="Options string (i.e data_limit: 1000)" value=""/> 17 <param name="settings" type="text" label="Options string (i.e data_limit: 1000)" value=""/>
17 </inputs> 18 </inputs>
18 <outputs> 19 <outputs>