Mercurial > repos > guerler > hhsuite
comparison hhblits.xml @ 2:c3bf37da2daa draft
"planemo upload commit 7d8de143106a5b1e6f1ea7150141567508573f8a-dirty"
| author | guerler |
|---|---|
| date | Mon, 27 Jul 2020 13:29:28 -0400 |
| parents | a6b54ca2bded |
| children | 35dbd62871b0 |
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| 1:a6b54ca2bded | 2:c3bf37da2daa |
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| 38 both query and database sequences by HMMs. You can search HHblits databases starting | 38 both query and database sequences by HMMs. You can search HHblits databases starting |
| 39 with a single query sequence, a multiple sequence alignment (MSA), or an HMM. HHblits | 39 with a single query sequence, a multiple sequence alignment (MSA), or an HMM. HHblits |
| 40 prints out a ranked list of database HMMs/MSAs and can also generate an MSA by merging | 40 prints out a ranked list of database HMMs/MSAs and can also generate an MSA by merging |
| 41 the significant database HMMs/MSAs onto the query MSA. | 41 the significant database HMMs/MSAs onto the query MSA. |
| 42 | 42 |
| 43 Steinegger M, Meier M, Mirdita M, Vöhringer H, Haunsberger S J, and Söding J (2019) | 43 Download databases from: http://wwwuser.gwdg.de/~compbiol/data/hhsuite/databases/hhsuite_dbs/ |
| 44 HH-suite3 for fast remote homology detection and deep protein annotation. | |
| 45 bioRxiv, 560029. doi:10.1101/560029 | |
| 46 (c) The HH-suite development team | |
| 47 | |
| 48 Download databases from <http://wwwuser.gwdg.de/~compbiol/data/hhsuite/databases/hhsuite_dbs/>. | |
| 49 ]]></help> | 44 ]]></help> |
| 50 <citations> | 45 <citations> |
| 51 <citation type="bibtex"> | 46 <citation type="bibtex"> |
| 52 @misc{githubhh-suite, | 47 @misc{githubhh-suite, |
| 53 author = {Soeding, Johannes}, | 48 author = {Soeding, Johannes}, |