Mercurial > repos > guerler > springsuite
comparison spring_minz.xml @ 26:124f82fbd986 draft
"planemo upload commit 7fe105e5874a3979f2c5ba7570f4f1ad0ec2559b-dirty"
| author | guerler |
|---|---|
| date | Sat, 31 Oct 2020 22:21:11 +0000 |
| parents | 5d1ae615e4ec |
| children | e34da554d415 |
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| 25:5d1ae615e4ec | 26:124f82fbd986 |
|---|---|
| 35 </outputs> | 35 </outputs> |
| 36 <tests> | 36 <tests> |
| 37 <test> | 37 <test> |
| 38 <param name="targets"> | 38 <param name="targets"> |
| 39 <collection type="list"> | 39 <collection type="list"> |
| 40 <element name="NP_000836.2.hhr" value="minz/NP_000836.2.hhr" /> | |
| 41 <element name="NP_000548.2.hhr" value="minz/NP_000548.2.hhr" /> | |
| 42 <element name="NP_000282.1.hhr" value="minz/NP_000282.1.hhr" /> | |
| 43 <element name="NP_000290.2.hhr" value="minz/NP_000290.2.hhr" /> | |
| 44 </collection> | |
| 45 </param> | |
| 46 <conditional name="input_type"> | |
| 47 <param name="input_type_selector" type="boolean" checked="false"/> | |
| 48 </conditional> | |
| 49 <param name="crossreference" value="minz/pdb70_random.txt"/> | |
| 50 <output name="output" file="minz/pdb70_result_0.txt"/> | |
| 51 <output name="log" file="minz/pdb70_log_0.txt"/> | |
| 52 </test> | |
| 53 <test> | |
| 54 <param name="targets"> | |
| 55 <collection type="list"> | |
| 40 <element name="NP_000282.1.hhr" value="minz/NP_000282.1.hhr" /> | 56 <element name="NP_000282.1.hhr" value="minz/NP_000282.1.hhr" /> |
| 41 </collection> | 57 </collection> |
| 42 </param> | 58 </param> |
| 43 <conditional name="input_type"> | 59 <conditional name="input_type"> |
| 44 <param name="input_type_selector" type="boolean" checked="true"/> | 60 <param name="input_type_selector" type="boolean" checked="true"/> |
| 50 <element name="NP_000836.2.hhr" value="minz/NP_000836.2.hhr" /> | 66 <element name="NP_000836.2.hhr" value="minz/NP_000836.2.hhr" /> |
| 51 </collection> | 67 </collection> |
| 52 </param> | 68 </param> |
| 53 </conditional> | 69 </conditional> |
| 54 <param name="crossreference" value="minz/pdb70_random.txt"/> | 70 <param name="crossreference" value="minz/pdb70_random.txt"/> |
| 55 <output name="output" file="minz/pdb70_result.txt"/> | 71 <output name="output" file="minz/pdb70_result_1.txt"/> |
| 56 <output name="log" file="minz/pdb70_log.txt"/> | 72 <output name="log" file="minz/pdb70_log_1.txt"/> |
| 57 </test> | 73 </test> |
| 58 </tests> | 74 </tests> |
| 59 <help><![CDATA[ | 75 <help><![CDATA[ |
| 60 This tool filters HH-search/HH-blits homology results through the protein interaction cross reference generated by SPRING. | 76 This tool filters HH-search/HH-blits homology results through the protein interaction cross reference generated by SPRING. |
| 61 Putative interactions are identified by evaluating the min-Z score. | 77 Putative interactions are identified by evaluating the min-Z score. |