Mercurial > repos > guerler > springsuite

comparison test-data/minz/6W9C_A.hhr @ 27:e34da554d415 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit f12d400ea7827bb7d6b2ef31eb7f38e555bd053f-dirty"
author guerler
date Sat, 31 Oct 2020 22:46:10 +0000
parents
children
comparison
equal deleted inserted replaced
26:124f82fbd986 27:e34da554d415
1 Query 6W9C_A
2 Match_columns 313
3 No_of_seqs 1 out of 1
4 Neff 1
5 Searched_HMMs 641
6 Date Sat Aug 1 03:09:06 2020
7 Command hhsearch -e 0.001 -i /Users/guerler/galaxy/database/files/000/dataset_686.dat -d hhdb -o /Users/guerler/galaxy/database/files/000/dataset_831.dat
8
9 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
10 1 ACY47587.1|GH78|346-867|5.6e-2 14.0 1.3 0.002 29.4 0.0 93 67-162 209-319 (496)
11 2 AAO76127.1|GH143 5.8 4.2 0.0066 28.3 0.0 34 63-96 261-299 (574)
12 3 AUO30192.1|GH149|2.4.1.-|0|1-1 5.1 5 0.0077 29.9 0.0 53 96-162 947-1007(1153)
13 4 AHA42547.2|GH5_2 4.1 6.5 0.01 21.7 0.0 27 5-31 66-96 (97)
14 5 AAW84061.1|PL10.hmm|1e-110|56- 3.6 7.5 0.012 24.2 0.0 86 57-144 37-135 (288)
15 6 ADJ39760.1|GT63|1-340|1.6e-218 3.6 7.6 0.012 24.8 0.0 29 44-72 289-329 (340)
16 7 ANS64378.1|GH43_22.hmm|8.3e-76 3.0 9.5 0.015 22.6 0.0 16 47-62 17-32 (244)
17 8 ACY49347.1|GH105|46-385|1.1e-1 2.1 14 0.022 21.8 0.0 28 90-119 169-196 (329)
18 9 ABG84856.1|PL8|420-695|7e-98 1.8 17 0.027 20.6 0.0 14 4-17 152-165 (263)
19 10 AHG92795.1|GH43_29.hmm|2.4e-57 1.5 22 0.034 21.2 0.0 24 89-112 52-76 (279)
20
21 No 1
22 >ACY47587.1|GH78|346-867|5.6e-200
23 Probab=14.01 E-value=1.3 Score=29.37 Aligned_cols=93 Identities=17% Similarity=0.196 Sum_probs=55.5 Template_Neff=7.200
24
25 Q 6W9C_A 67 FEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG--LT------SIKWAD-----N-----NCYLATALLTLQQIELKFNPP 128 (313)
26 Q Consensus 67 feyyhttdpsflgrymsalnhtkkwkypqvng--lt------sikwad-----n-----ncylatalltlqqielkfnpp 128 (313)
27 --|.++-|.++|.++..++..--.|-..+++. -. -..|.+ + |++++-+|..+.+|.-....+
28 T Consensus 209 ~~Y~~~GD~~~l~~~y~~~~~~l~~~~~~~~~~g~~~l~~~~~gDW~~~~~~~~~~~~~~a~~~~~l~~~a~lA~~LG~~ 288 (496)
29 T ACY47587.1|GH7 209 DYYRYYGDKEFLEEQYPSMKRWLDYLESRADDDGNWGLWDTGFGDWLDDPPAGGTDLVATAYYYYSLRLMAELAEALGKT 288 (496)
30 Confidence 34567889999988877776555555555533 11 255555 2 778888888888887777766
31
32
33 Q 6W9C_A 129 ALQDAYYRARAGEAANFCALILAYCNKTVGELGD 162 (313)
34 Q Consensus 129 alqdayyrarageaanfcalilaycnktvgelgd 162 (313)
35 +.. +.|+.+|.+... |+.-.+-|..-|...|
36 T Consensus 289 ~~a-~~y~~~a~~lk~--a~~~~~~~~~~G~y~~ 319 (496)
37 T ACY47587.1|GH7 289 EDA-ARYRALAERLKA--AFNKEFWDPDTGRYAD 319 (496)
38 Confidence 553 345666555432 2222333444454544
39
40
41 No 2
42 >AAO76127.1|GH143
43 Probab=5.76 E-value=4.2 Score=28.33 Aligned_cols=34 Identities=35% Similarity=0.699 Sum_probs=26.2 Template_Neff=2.500
44
45 Q 6W9C_A 63 RVEAFEYYHTTDPSFLGRYMSALN-----HTKKWKYPQV 96 (313)
46 Q Consensus 63 rveafeyyhttdpsflgrymsaln-----htkkwkypqv 96 (313)
47 ..+||.|||-.|-...|-+-.||- .-|.|.|+.+
48 T Consensus 261 ~ykAFsyYhlpDGrvVgLWK~altsiS~D~GktW~y~p~ 299 (574)
49 T AAO76127.1|GH1 261 GYKAFSYYHLPDGRVVGLWKHALTSISEDGGKTWSYNPL 299 (574)
50 Confidence 358999999999988887776664 3467887654
51
52
53 No 3
54 >AUO30192.1|GH149|2.4.1.-|0|1-1154
55 Probab=5.08 E-value=5 Score=29.90 Aligned_cols=53 Identities=36% Similarity=0.506 Sum_probs=33.5 Template_Neff=3.200
56
57 Q 6W9C_A 96 VNGLTSIKWADNNCYLATALLTLQQIELKF-----NP---PALQDAYYRARAGEAANFCALILAYCNKTVGELGD 162 (313)
58 Q Consensus 96 vngltsikwadnncylatalltlqqielkf-----np---palqdayyrarageaanfcalilaycnktvgelgd 162 (313)
59 -.||-||-|-- .+-.||..|..-++. ++ .+|.+.||+.|+|-. .||+-.+-|-
60 T Consensus 947 YEGLGsIYWHM----VSKLLLAvqE~~~~Ai~~~~~~~~~~~L~~~YyeIr~GIG----------~~KsPe~YGA 1007 (1153)
61 T AUO30192.1|GH1 947 YEGLGSIYWHM----VSKLLLAVQENCLDAIEQGADSEVIGKLADHYYEIRAGIG----------FNKSPELYGA 1007 (1153)
62 Confidence 46999999952 333444444433322 32 468999999999954 3566665554
63
64
65 No 4
66 >AHA42547.2|GH5_2
67 Probab=4.12 E-value=6.5 Score=21.71 Aligned_cols=27 Identities=33% Similarity=0.395 Sum_probs=19.9 Template_Neff=1.800
68
69 Q 6W9C_A 5 VFTTVDN----INLHTQVVDMSMTYGQQFGP 31 (313)
70 Q Consensus 5 vfttvdn----inlhtqvvdmsmtygqqfgp 31 (313)
71 =||||++ -+|...|+..+-.|.-|||.
72 T Consensus 66 gfttVatat~nc~lYiyvkqAp~Sf~lqFgs 96 (97)
73 T AHA42547.2|GH5 66 GFTTVATATMNCALYIYVKQAPSSFTLQFGS 96 (97)
74 Confidence 3777775 45667788888888888873
75
76
77 No 5
78 >AAW84061.1|PL10.hmm|1e-110|56-346
79 Probab=3.63 E-value=7.5 Score=24.18 Aligned_cols=86 Identities=29% Similarity=0.338 Sum_probs=59.3 Template_Neff=4.300
80
81 Q 6W9C_A 57 PNDDT---LRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYP-----QVNGL-----TSIKWADNNCYLATALLTLQQIEL 123 (313)
82 Q Consensus 57 pnddt---lrveafeyyhttdpsflgrymsalnhtkkwkyp-----qvngl-----tsikwadnncylatalltlqqiel 123 (313)
83 .|+-| ||.-|--|-.|.|+.+..-....|+..-+-.|| |+--+ ..|...||- +.-.|..|+.|.-
84 T Consensus 37 DN~AT~tei~~LA~~y~~t~~~~Yr~A~~kGl~yLL~aQY~nGGWPQ~yP~~~~Y~~~ITfNDdA--M~~vl~lL~di~~ 114 (288)
85 T AAW84061.1|PL1 37 DNGATTTEIRFLARAYKATGDERYRDAALKGLDYLLAAQYPNGGWPQFYPLRGGYHDHITFNDDA--MVNVLELLRDIAE 114 (288)
86 Confidence 45544 566677788888888887777777766555543 33322 246666664 4556777788887
87
88
89 Q 6W9C_A 124 KFNPPALQDAYYRARAGEAAN 144 (313)
90 Q Consensus 124 kfnppalqdayyrarageaan 144 (313)
91 +-+|-++-|+-+|+||.+|.+
92 T Consensus 115 ~~~~f~fvd~~~r~ra~~A~~ 135 (288)
93 T AAW84061.1|PL1 115 GKPPFDFVDAARRARARQAVD 135 (288)
94 Confidence 777778888889999988765
95
96
97 No 6
98 >ADJ39760.1|GT63|1-340|1.6e-218
99 Probab=3.62 E-value=7.6 Score=24.76 Aligned_cols=29 Identities=34% Similarity=0.527 Sum_probs=23.1 Template_Neff=1.400
100
101 Q 6W9C_A 44 PHNSHEGKTFYV------------LPNDDTLRVEAFEYYHT 72 (313)
102 Q Consensus 44 phnshegktfyv------------lpnddtlrveafeyyht 72 (313)
103 .||--+...||| +.|||.||.|..+|-|.
104 T Consensus 289 ~~~i~~~~~fyv~nr~elid~in~~k~~~~~r~e~l~~qh~ 329 (340)
105 T ADJ39760.1|GT6 289 KHRIINDARFYVNNRAELIDRVNELKHSDVLRKEMLSIQHD 329 (340)
106 Confidence 366667778887 56889999999999885
107
108
109 No 7
110 >ANS64378.1|GH43_22.hmm|8.3e-76|54-270
111 Probab=3.00 E-value=9.5 Score=22.64 Aligned_cols=16 Identities=31% Similarity=0.746 Sum_probs=13.6 Template_Neff=5.100
112
113 Q 6W9C_A 47 SHEGKTFYVLPNDDTL 62 (313)
114 Q Consensus 47 shegktfyvlpnddtl 62 (313)
115 |++|.+||+++-|+.+
116 T Consensus 17 s~dgdkfyiiATDL~i 32 (244)
117 T ANS64378.1|GH4 17 SPDGDKFYIIATDLRI 32 (244)
118 Confidence 7899999999988654
119
120
121 No 8
122 >ACY49347.1|GH105|46-385|1.1e-131
123 Probab=2.15 E-value=14 Score=21.82 Aligned_cols=28 Identities=29% Similarity=0.627 Sum_probs=22.0 Template_Neff=6.200
124
125 Q 6W9C_A 90 KWKYPQVNGLTSIKWADNNCYLATALLTLQ 119 (313)
126 Q Consensus 90 kwkypqvngltsikwadnncylatalltlq 119 (313)
127 .|--| .|...+-|+-.|...+.||..+-
128 T Consensus 169 ~wa~~--t~~s~~fW~RgnGW~~~aL~~~L 196 (329)
129 T ACY49347.1|GH1 169 NWADP--TGGSPAFWGRGNGWVAMALVDVL 196 (329)
130 Confidence 34444 78899999999999999887653
131
132
133 No 9
134 >ABG84856.1|PL8|420-695|7e-98
135 Probab=1.83 E-value=17 Score=20.63 Aligned_cols=14 Identities=29% Similarity=0.344 Sum_probs=10.3 Template_Neff=6.200
136
137 Q 6W9C_A 4 KVFTTVDNINLHTQ 17 (313)
138 Q Consensus 4 kvfttvdninlhtq 17 (313)
139 .|.|||||-.+...
140 T Consensus 152 ~v~TTi~qr~~~~~ 165 (263)
141 T ABG84856.1|PL8 152 PVETTIEQRKLNGK 165 (263)
142 Confidence 46788888877665
143
144
145 No 10
146 >AHG92795.1|GH43_29.hmm|2.4e-57|84-380
147 Probab=1.51 E-value=22 Score=21.20 Aligned_cols=24 Identities=17% Similarity=0.476 Sum_probs=16.6 Template_Neff=4.100
148
149 Q 6W9C_A 89 KKWK-YPQVNGLTSIKWADNNCYLA 112 (313)
150 Q Consensus 89 kkwk-ypqvngltsikwadnncyla 112 (313)
151 +.|+ ++.+-.++.++||+++.+-+
152 T Consensus 52 ~nWtdhg~~l~~~~F~WA~~~AwA~ 76 (279)
153 T AHG92795.1|GH4 52 VNWTDHGSVLSPKDFSWAKGDAWAS 76 (279)
154 Confidence 4554 45677788999998665543
155
156