Mercurial > repos > guerler > springsuite

comparison test-data1/minz/NP_000290.2.hhr @ 27:e34da554d415 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit f12d400ea7827bb7d6b2ef31eb7f38e555bd053f-dirty"
author guerler
date Sat, 31 Oct 2020 22:46:10 +0000
parents
children
comparison
equal deleted inserted replaced
26:124f82fbd986 27:e34da554d415
1 Query NP_000290.2
2 Match_columns 747
3 No_of_seqs 3849 out of 40250
4 Neff 6.23432
5 Searched_HMMs 998
6 Date Fri Jul 24 20:45:58 2020
7 Command /home/guerler/hh-suite/build/bin/hhblits -i /home/guerler/human/fasta/NP_00/NP_000290.2.fasta -d /home/guerler/pdb70/pdb70 -o /home/guerler/human/hhr/NP_00/NP_000290.2.hhr
8
9 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
10 1 1XM9_A plakophilin 1 Plakophi 99.7 6.3E-22 7.3E-26 206.9 0.0 453 246-719 3-455 (457)
11 2 3L6X_A Catenin delta-1, E-cadh 99.4 1.1E-17 1.2E-21 185.5 0.0 438 245-729 48-492 (584)
12 3 5D5K_C Importin subunit alpha- 98.6 1.1E-11 1.4E-15 126.2 0.0 369 243-713 11-386 (466)
13 4 3NMZ_A APC variant protein, Rh 98.6 1.3E-11 1.4E-15 129.0 0.0 381 238-715 25-452 (458)
14 5 4UAF_B Importin alpha 1 import 98.5 1.3E-11 1.6E-15 125.7 0.0 369 243-713 11-386 (466)
15 6 4U5L_A deltaIBB-importin-alpha 98.5 1.7E-11 2E-15 123.0 0.0 360 246-712 49-425 (426)
16 7 6SA7_B DARPin-Armadillo fusion 98.5 2.5E-11 2.9E-15 127.0 0.0 136 244-380 172-309 (510)
17 8 4RV1_D Engineered Protein OR49 98.5 2.7E-11 3.2E-15 120.8 0.0 362 247-715 4-369 (420)
18 9 6S9O_F designed Armadillo repe 98.5 2.8E-11 3.3E-15 117.9 0.0 167 545-724 170-338 (344)
19 10 5MFD_C YIIIM''6AII, Capsid dec 98.5 3E-11 3.5E-15 116.2 0.0 318 246-712 5-326 (328)
20 11 4MZ6_E Deoxyuridine 5'-triphos 98.5 3.5E-11 4E-15 125.0 0.0 368 244-713 56-430 (509)
21 12 5UMZ_B Importin subunit alpha- 98.5 3.5E-11 4E-15 125.0 0.0 368 244-713 56-430 (509)
22 13 2JDQ_A IMPORTIN ALPHA-1 SUBUNI 98.4 3.6E-11 4.2E-15 122.1 0.0 367 244-716 19-393 (450)
23 14 4E4V_A Importin subunit alpha- 98.4 3.6E-11 4.2E-15 124.3 0.0 364 246-716 76-456 (485)
24 15 4B18_A IMPORTIN SUBUNIT ALPHA- 98.4 4E-11 4.7E-15 121.6 0.0 368 244-717 16-391 (447)
25 16 4XZR_B Heh1-NLS, Kap60; karyop 98.4 4.3E-11 5E-15 119.8 0.0 363 248-717 4-375 (423)
26 17 5XZX_A Importin subunit alpha- 98.4 4.3E-11 5.1E-15 119.5 0.0 133 247-380 4-140 (416)
27 18 1JDH_A BETA-CATENIN, hTcf-4; B 98.4 4.4E-11 5.2E-15 123.9 0.0 378 245-726 101-502 (529)
28 19 3IFQ_A plakoglobin, E-cadherin 98.4 4.5E-11 5.3E-15 124.5 0.0 381 246-726 104-503 (553)
29 20 4UAD_A Importin alpha import a 98.4 6E-11 7E-15 121.8 0.0 372 246-723 68-456 (479)
30 21 5ZHX_D Rap1 GTPase-GDP dissoci 98.4 6.3E-11 7.5E-15 120.9 0.0 407 246-727 19-458 (487)
31 22 1EE4_A KARYOPHERIN ALPHA; ARM 98.4 8.2E-11 9.6E-15 117.7 0.0 364 247-717 3-375 (423)
32 23 1EE4_B KARYOPHERIN ALPHA; ARM 98.4 8.2E-11 9.6E-15 117.7 0.0 364 247-717 3-375 (423)
33 24 4EV8_A Catenin beta-1; mouse c 98.3 9.8E-11 1.2E-14 121.5 0.0 382 246-727 103-504 (538)
34 25 4RXH_B Importin subunit alpha, 98.3 1.1E-10 1.2E-14 121.7 0.0 365 246-716 72-457 (495)
35 26 4BQK_A IMPORTIN SUBUNIT ALPHA- 98.3 1.2E-10 1.3E-14 118.5 0.0 366 246-716 46-427 (456)
36 27 6BW9_A Importin subunit alpha- 98.3 1.3E-10 1.5E-14 118.5 0.0 366 246-717 53-428 (459)
37 28 1WA5_B GTP-BINDING NUCLEAR PRO 98.3 1.9E-10 2.2E-14 121.4 0.0 134 245-379 173-308 (530)
38 29 5XGC_A Rap1 GTPase-GDP dissoci 98.3 2E-10 2.3E-14 117.7 0.0 409 246-729 35-476 (503)
39 30 4BPL_A IMPORTIN SUBUNIT ALPHA- 98.2 2.4E-10 2.9E-14 115.9 0.0 367 246-717 44-426 (454)
40 31 4B8J_A IMPORTIN SUBUNIT ALPHA- 98.2 2.6E-10 2.9E-14 120.0 0.0 367 246-717 118-500 (528)
41 32 5T94_B Guanine nucleotide exch 98.2 2.9E-10 3.3E-14 120.5 0.0 364 246-716 131-513 (542)
42 33 4TNM_A Importin-alpha3 / MOS6; 98.2 3.2E-10 3.7E-14 119.6 0.0 369 246-719 119-504 (531)
43 34 5TBK_C Importin subunit alpha- 98.2 3.4E-10 3.8E-14 119.3 0.0 366 245-716 71-443 (521)
44 35 5TBK_D Importin subunit alpha- 98.2 3.4E-10 3.8E-14 119.3 0.0 366 245-716 71-443 (521)
45 36 2Z6G_A B-catenin; Full-Length, 98.1 6.4E-10 6.8E-14 126.7 0.0 381 245-725 234-634 (780)
46 37 1JDH_A BETA-CATENIN, hTcf-4; B 98.1 6.1E-10 7.2E-14 115.0 0.0 326 286-717 16-343 (529)
47 38 2Z6H_A Catenin beta-1; Beta-Ca 98.1 7.3E-10 8.1E-14 121.3 0.0 378 246-673 99-530 (644)
48 39 6SA8_A ring-like DARPin-Armadi 98.1 7.7E-10 8.7E-14 121.2 0.0 342 244-691 177-522 (671)
49 40 4RXH_B Importin subunit alpha, 98.1 1.2E-09 1.4E-13 113.4 0.0 157 545-714 196-354 (495)
50 41 5XJG_A Vacuolar protein 8, Nuc 98.0 1.3E-09 1.5E-13 111.8 0.0 133 246-380 159-293 (506)
51 42 6KBM_A Vacuolar protein 8, Aut 98.0 1.3E-09 1.5E-13 111.8 0.0 133 246-380 159-293 (506)
52 43 4TNM_A Importin-alpha3 / MOS6; 98.0 2E-09 2.3E-13 113.3 0.0 158 545-714 243-402 (531)
53 44 6KBN_A Vacuolar protein 8, Aut 98.0 2.1E-09 2.5E-13 112.9 0.0 133 246-380 153-287 (563)
54 45 6KBN_C Vacuolar protein 8, Aut 98.0 2.1E-09 2.5E-13 112.9 0.0 133 246-380 153-287 (563)
55 46 4EV8_A Catenin beta-1; mouse c 98.0 2.1E-09 2.5E-13 111.1 0.0 323 286-716 17-343 (538)
56 47 4BPL_A IMPORTIN SUBUNIT ALPHA- 98.0 2.2E-09 2.5E-13 108.6 0.0 158 545-714 168-327 (454)
57 48 4PLS_B Arm00010; PEPTIDE BINDI 98.0 2.5E-09 2.9E-13 100.1 0.0 112 247-359 3-114 (281)
58 49 5Z8H_A Adenomatous polyposis c 98.0 2.6E-09 3E-13 104.9 0.0 123 258-380 92-219 (339)
59 50 2Z6H_A Catenin beta-1; Beta-Ca 98.0 2.8E-09 3.1E-13 116.5 0.0 415 246-726 57-499 (644)
60 51 5AEI_B DESIGNED ARMADILLO REPE 97.9 2.9E-09 3.4E-13 99.9 0.0 114 246-360 5-118 (286)
61 52 4B8J_A IMPORTIN SUBUNIT ALPHA- 97.9 3.2E-09 3.7E-13 111.3 0.0 160 544-715 199-360 (528)
62 53 4R10_A Protein humpback-2, Cad 97.9 4.1E-09 4.8E-13 110.8 0.0 417 245-725 73-531 (572)
63 54 5XJG_A Vacuolar protein 8, Nuc 97.9 4.2E-09 5E-13 107.7 0.0 359 246-716 39-399 (506)
64 55 6KBM_A Vacuolar protein 8, Aut 97.9 4.2E-09 5E-13 107.7 0.0 359 246-716 39-399 (506)
65 56 5IZA_A Adenomatous polyposis c 97.9 4.5E-09 5E-13 105.1 0.0 297 236-625 23-335 (354)
66 57 4R0Z_A Protein humpback-2; arm 97.9 5.4E-09 6.2E-13 112.3 0.0 401 246-718 115-565 (629)
67 58 4R0Z_A Protein humpback-2; arm 97.9 5.5E-09 6.3E-13 112.2 0.0 418 245-726 73-532 (629)
68 59 1XM9_A plakophilin 1 Plakophi 97.8 6.1E-09 7E-13 106.4 0.0 350 245-671 44-450 (457)
69 60 4I2Z_A Protein UNC-45, Heat sh 97.8 7.3E-09 7.1E-13 122.5 0.0 69 247-316 648-716 (961)
70 61 6SWY_5 Vacuolar import and deg 97.8 7.4E-09 7.2E-13 121.9 0.0 402 240-720 281-784 (921)
71 62 5IZ8_A Adenomatous polyposis c 97.8 6.6E-09 7.4E-13 103.8 0.0 297 236-625 23-335 (354)
72 63 3IFQ_A plakoglobin, E-cadherin 97.8 6.4E-09 7.5E-13 107.7 0.0 374 244-725 18-399 (553)
73 64 4I2W_A Protein UNC-45, Heat sh 97.8 7.9E-09 7.7E-13 122.2 0.0 70 246-316 647-716 (961)
74 65 4R10_A Protein humpback-2, Cad 97.8 8.7E-09 1E-12 108.2 0.0 398 246-715 115-562 (572)
75 66 5T94_B Guanine nucleotide exch 97.8 9.3E-09 1.1E-12 108.5 0.0 159 544-715 254-414 (542)
76 67 6KBN_A Vacuolar protein 8, Aut 97.8 9.2E-09 1.1E-12 107.8 0.0 358 245-714 32-391 (563)
77 68 6KBN_C Vacuolar protein 8, Aut 97.8 9.2E-09 1.1E-12 107.8 0.0 358 245-714 32-391 (563)
78 69 2Z6G_A B-catenin; Full-Length, 97.8 1.2E-08 1.3E-12 115.8 0.0 373 244-724 149-529 (780)
79 70 5EWP_B Uncharacterized protein 97.7 1.3E-08 1.5E-12 96.8 0.0 118 263-381 60-181 (252)
80 71 5XGC_A Rap1 GTPase-GDP dissoci 97.7 1.3E-08 1.6E-12 103.5 0.0 358 257-715 5-373 (503)
81 72 6BW9_A Importin subunit alpha- 97.7 1.6E-08 1.9E-12 102.4 0.0 367 244-716 8-381 (459)
82 73 5D5K_C Importin subunit alpha- 97.7 2E-08 2.4E-12 101.3 0.0 364 246-716 57-437 (466)
83 74 4UAF_B Importin alpha 1 import 97.6 2.4E-08 2.9E-12 100.7 0.0 364 246-716 57-437 (466)
84 75 3L6X_A Catenin delta-1, E-cadh 97.6 2.7E-08 2.9E-12 108.4 0.0 364 263-713 26-432 (584)
85 76 4U5L_A deltaIBB-importin-alpha 97.6 2.9E-08 3.5E-12 98.5 0.0 367 245-713 5-378 (426)
86 77 4MZ6_E Deoxyuridine 5'-triphos 97.6 3.4E-08 4E-12 101.6 0.0 364 246-716 101-481 (509)
87 78 5UMZ_B Importin subunit alpha- 97.6 3.4E-08 4E-12 101.6 0.0 364 246-716 101-481 (509)
88 79 5ZHX_D Rap1 GTPase-GDP dissoci 97.6 3.6E-08 4.2E-12 99.7 0.0 332 282-715 13-357 (487)
89 80 3NOW_A SD10334p; Armadillo Rep 97.6 3.6E-08 4.2E-12 107.8 0.0 135 244-380 289-431 (810)
90 81 4EV8_A Catenin beta-1; mouse c 97.5 4.1E-08 4.9E-12 100.9 0.0 137 245-381 267-409 (538)
91 82 5Z8H_A Adenomatous polyposis c 97.5 4.4E-08 5E-12 95.7 0.0 161 544-716 162-332 (339)
92 83 3SL9_B Catenin beta-1, B-cell 97.5 4.8E-08 5.5E-12 84.8 0.0 134 245-381 13-150 (167)
93 84 4E4V_A Importin subunit alpha- 97.5 5E-08 5.7E-12 99.9 0.0 156 546-714 206-363 (485)
94 85 1WA5_B GTP-BINDING NUCLEAR PRO 97.5 5.1E-08 5.8E-12 102.1 0.0 368 242-716 84-460 (530)
95 86 1EE4_A KARYOPHERIN ALPHA; ARM 97.5 5.1E-08 6E-12 96.6 0.0 115 245-360 87-201 (423)
96 87 1EE4_B KARYOPHERIN ALPHA; ARM 97.5 5.1E-08 6E-12 96.6 0.0 115 245-360 87-201 (423)
97 88 4I2Z_A Protein UNC-45, Heat sh 97.5 6.2E-08 6E-12 114.3 0.0 431 248-725 443-904 (961)
98 89 5XZX_A Importin subunit alpha- 97.5 6.3E-08 7.4E-12 95.7 0.0 360 246-711 46-415 (416)
99 90 5MFO_F YIIIM3AIII; Designed ar 97.5 6.9E-08 8.1E-12 85.3 0.0 134 246-380 5-140 (202)
100 91 3SL9_E Catenin beta-1, B-cell 97.5 7.2E-08 8.3E-12 83.6 0.0 134 245-381 13-150 (167)
101 92 3NOW_A SD10334p; Armadillo Rep 97.5 7.3E-08 8.5E-12 105.4 0.0 110 247-358 8-120 (810)
102 93 5MFO_E YIIIM3AIII; Designed ar 97.4 7.9E-08 9.3E-12 84.9 0.0 134 246-380 5-140 (202)
103 94 4XZR_B Heh1-NLS, Kap60; karyop 97.4 8.1E-08 9.6E-12 95.0 0.0 115 245-360 87-201 (423)
104 95 3OPB_A SWI5-dependent HO expre 97.4 9.1E-08 9.6E-12 108.6 0.0 168 546-719 544-734 (778)
105 96 4I2W_A Protein UNC-45, Heat sh 97.4 1E-07 9.8E-12 112.5 0.0 433 247-726 442-905 (961)
106 97 3TT9_A Plakophilin-2; CELL ADH 97.4 9.1E-08 1E-11 88.5 0.0 221 245-487 8-232 (233)
107 98 2Z6H_A Catenin beta-1; Beta-Ca 97.4 9.4E-08 1E-11 103.9 0.0 378 241-726 10-395 (644)
108 99 4U2X_E eVP24, KPNA5C; eVP24, i 97.4 9.4E-08 1.1E-11 83.8 0.0 116 246-362 9-125 (175)
109 100 4RV1_D Engineered Protein OR49 97.4 9.1E-08 1.1E-11 94.3 0.0 363 246-715 45-411 (420)
110 101 4BQK_A IMPORTIN SUBUNIT ALPHA- 97.4 9.4E-08 1.1E-11 96.1 0.0 158 545-714 170-329 (456)
111 102 5TBK_C Importin subunit alpha- 97.4 1E-07 1.2E-11 99.7 0.0 160 544-715 196-357 (521)
112 103 5TBK_D Importin subunit alpha- 97.4 1E-07 1.2E-11 99.7 0.0 160 544-715 196-357 (521)
113 104 4U2X_F eVP24, KPNA5C; eVP24, i 97.4 1.2E-07 1.4E-11 83.0 0.0 116 246-362 9-125 (175)
114 105 4V3Q_A YIII_M4_AII; DE NOVO PR 97.4 1.2E-07 1.4E-11 87.0 0.0 113 247-360 10-122 (247)
115 106 3NMZ_A APC variant protein, Rh 97.3 1.5E-07 1.7E-11 97.0 0.0 136 245-380 243-389 (458)
116 107 3L6X_A Catenin delta-1, E-cadh 97.3 1.6E-07 1.7E-11 102.1 0.0 377 246-672 91-522 (584)
117 108 5MFI_B YIII(Dq.V2)4CqI, (KR)4; 97.3 1.5E-07 1.8E-11 85.8 0.0 113 246-359 5-117 (243)
118 109 5MFJ_B YIII(Dq.V2)4CqI, (KR)5; 97.3 1.5E-07 1.8E-11 85.8 0.0 113 246-359 5-117 (243)
119 110 5VOZ_P V-type proton ATPase ca 97.3 2.1E-07 2.1E-11 101.0 0.0 134 246-382 124-281 (478)
120 111 5D80_H V-type proton ATPase ca 97.3 2.1E-07 2.1E-11 101.0 0.0 134 246-382 124-281 (478)
121 112 1JDH_A BETA-CATENIN, hTcf-4; B 97.3 1.9E-07 2.2E-11 95.6 0.0 138 245-382 266-409 (529)
122 113 2Z6G_A B-catenin; Full-Length, 97.3 2.2E-07 2.3E-11 105.1 0.0 353 245-671 276-664 (780)
123 114 1HO8_A VACUOLAR ATP SYNTHASE S 97.3 2.5E-07 2.5E-11 100.5 0.0 135 245-382 125-283 (480)
124 115 6S9O_F designed Armadillo repe 97.2 2.9E-07 3.4E-11 88.3 0.0 135 246-381 173-309 (344)
125 116 1XM9_A plakophilin 1 Plakophi 97.2 3.2E-07 3.6E-11 93.1 0.0 114 246-361 332-451 (457)
126 117 1XQS_B HSPBP1 protein, Heat sh 97.2 3.3E-07 3.7E-11 87.9 0.0 134 246-380 66-203 (280)
127 118 5MFI_B YIII(Dq.V2)4CqI, (KR)4; 97.2 3.4E-07 4E-11 83.4 0.0 134 246-380 47-182 (243)
128 119 5MFJ_B YIII(Dq.V2)4CqI, (KR)5; 97.2 3.4E-07 4E-11 83.4 0.0 134 246-380 47-182 (243)
129 120 6SA6_A DARPin-Armadillo fusion 97.2 3.9E-07 4.4E-11 91.0 0.0 134 246-380 200-335 (397)
130 121 6SA8_A ring-like DARPin-Armadi 97.2 4E-07 4.5E-11 98.8 0.0 135 245-380 220-356 (671)
131 122 1XQR_A HspBP1 protein; armadil 97.1 4.4E-07 4.9E-11 88.9 0.0 134 246-380 82-219 (296)
132 123 4UAD_A Importin alpha import a 97.1 4.5E-07 5.3E-11 91.8 0.0 368 245-718 23-398 (479)
133 124 5MFD_C YIIIM''6AII, Capsid dec 97.1 6.1E-07 7.2E-11 84.8 0.0 114 246-360 89-202 (328)
134 125 6HB3_B Protein HGH1; solenoid 97.1 7E-07 7.2E-11 92.3 0.0 121 246-369 52-208 (369)
135 126 3OPB_A SWI5-dependent HO expre 97.1 7.2E-07 7.6E-11 100.9 0.0 156 546-711 605-776 (778)
136 127 4HXT_A De Novo Protein OR329; 97.0 7.7E-07 9.1E-11 80.9 0.0 113 247-360 4-116 (252)
137 128 3GQ2_A General vesicular trans 97.0 9.1E-07 9.4E-11 98.4 0.0 136 245-381 60-219 (651)
138 129 3GRL_A General vesicular trans 97.0 9.1E-07 9.4E-11 98.4 0.0 136 245-381 60-219 (651)
139 130 4HXT_A De Novo Protein OR329; 97.0 8.1E-07 9.6E-11 80.7 0.0 114 246-360 45-158 (252)
140 131 4PLS_B Arm00010; PEPTIDE BINDI 97.0 8.3E-07 9.9E-11 82.1 0.0 114 246-360 44-157 (281)
141 132 5IZA_A Adenomatous polyposis c 97.0 9.5E-07 1.1E-10 87.4 0.0 114 245-358 127-246 (354)
142 133 5IZ8_A Adenomatous polyposis c 97.0 1E-06 1.1E-10 87.2 0.0 113 246-358 128-246 (354)
143 134 6SA7_B DARPin-Armadillo fusion 97.0 1.1E-06 1.2E-10 90.6 0.0 135 246-381 342-478 (510)
144 135 4V3Q_A YIII_M4_AII; DE NOVO PR 97.0 1.1E-06 1.3E-10 80.3 0.0 135 245-380 92-228 (247)
145 136 5Z8H_A Adenomatous polyposis c 96.9 1.2E-06 1.4E-10 85.0 0.0 134 245-379 122-267 (339)
146 137 5AEI_B DESIGNED ARMADILLO REPE 96.9 1.4E-06 1.7E-10 80.6 0.0 112 246-358 173-284 (286)
147 138 5IZA_A Adenomatous polyposis c 96.9 1.5E-06 1.7E-10 85.8 0.0 124 258-381 97-225 (354)
148 139 5IZ8_A Adenomatous polyposis c 96.9 1.6E-06 1.8E-10 85.8 0.0 124 258-381 97-225 (354)
149 140 3NMZ_A APC variant protein, Rh 96.9 1.6E-06 1.8E-10 88.9 0.0 135 246-381 287-432 (458)
150 141 6SA7_B DARPin-Armadillo fusion 96.9 1.6E-06 1.9E-10 89.2 0.0 134 246-380 300-435 (510)
151 142 5TBK_C Importin subunit alpha- 96.9 1.7E-06 1.9E-10 90.0 0.0 367 246-718 115-491 (521)
152 143 5TBK_D Importin subunit alpha- 96.9 1.7E-06 1.9E-10 90.0 0.0 367 246-718 115-491 (521)
153 144 6HB1_A Protein HGH1; solenoid 96.9 1.8E-06 1.9E-10 89.0 0.0 169 547-723 51-256 (369)
154 145 6HB2_D Protein HGH1; solenoid 96.9 1.8E-06 1.9E-10 89.0 0.0 169 547-723 51-256 (369)
155 146 5MFD_C YIIIM''6AII, Capsid dec 96.8 1.8E-06 2.1E-10 81.5 0.0 114 246-360 47-160 (328)
156 147 6SA7_B DARPin-Armadillo fusion 96.8 1.8E-06 2.1E-10 88.8 0.0 115 246-361 384-498 (510)
157 148 6S9O_F designed Armadillo repe 96.8 2.5E-06 2.9E-10 81.5 0.0 115 245-360 46-160 (344)
158 149 1XM9_A plakophilin 1 Plakophi 96.8 2.5E-06 2.9E-10 86.1 0.0 167 543-716 82-316 (457)
159 150 4HXT_A De Novo Protein OR329; 96.8 2.5E-06 2.9E-10 77.3 0.0 114 246-360 129-242 (252)
160 151 6SA6_A DARPin-Armadillo fusion 96.7 3E-06 3.4E-10 84.2 0.0 132 248-380 160-293 (397)
161 152 3NMZ_A APC variant protein, Rh 96.7 3.3E-06 3.7E-10 86.5 0.0 135 246-380 190-340 (458)
162 153 6HB1_A Protein HGH1; solenoid 96.6 5.3E-06 5.5E-10 85.4 0.0 93 287-381 9-108 (369)
163 154 6HB2_D Protein HGH1; solenoid 96.6 5.3E-06 5.5E-10 85.4 0.0 93 287-381 9-108 (369)
164 155 2W3C_A GENERAL VESICULAR TRANS 96.6 5.7E-06 5.9E-10 90.0 0.0 135 246-381 71-213 (577)
165 156 4XZR_B Heh1-NLS, Kap60; karyop 96.6 5.2E-06 6.2E-10 81.4 0.0 114 246-360 172-285 (423)
166 157 3TT9_A Plakophilin-2; CELL ADH 96.6 6E-06 6.8E-10 75.6 0.0 136 246-382 53-206 (233)
167 158 6HB3_B Protein HGH1; solenoid 96.6 6.6E-06 6.8E-10 84.6 0.0 93 287-381 9-108 (369)
168 159 6SA8_A ring-like DARPin-Armadi 96.5 6.4E-06 7.1E-10 88.9 0.0 322 286-714 177-502 (671)
169 160 1EE4_A KARYOPHERIN ALPHA; ARM 96.5 6.8E-06 8.1E-10 80.5 0.0 114 246-360 214-327 (423)
170 161 1EE4_B KARYOPHERIN ALPHA; ARM 96.5 6.8E-06 8.1E-10 80.5 0.0 114 246-360 214-327 (423)
171 162 5KC2_B Phosphatidylinositol 3- 96.5 9.9E-06 1E-09 98.5 0.0 150 546-715 618-768 (1454)
172 163 4B18_A IMPORTIN SUBUNIT ALPHA- 96.4 8.9E-06 1E-09 80.7 0.0 366 245-716 61-443 (447)
173 164 1JDH_A BETA-CATENIN, hTcf-4; B 96.4 9E-06 1.1E-09 82.5 0.0 363 245-712 143-529 (529)
174 165 5MFI_B YIII(Dq.V2)4CqI, (KR)4; 96.4 9.2E-06 1.1E-09 73.3 0.0 135 245-380 88-224 (243)
175 166 5MFJ_B YIII(Dq.V2)4CqI, (KR)5; 96.4 9.2E-06 1.1E-09 73.3 0.0 135 245-380 88-224 (243)
176 167 4MFU_A Beta-catenin-like prote 96.4 1.1E-05 1.1E-09 87.3 0.0 182 539-725 60-261 (490)
177 168 5AEI_B DESIGNED ARMADILLO REPE 96.4 1E-05 1.2E-09 74.6 0.0 134 246-380 89-224 (286)
178 169 4PLS_B Arm00010; PEPTIDE BINDI 96.4 1.1E-05 1.3E-09 74.1 0.0 111 246-357 170-280 (281)
179 170 4HM9_A Beta-catenin-like prote 96.4 1.4E-05 1.3E-09 88.6 0.0 181 539-725 138-339 (568)
180 171 3L6X_A Catenin delta-1, E-cadh 96.4 1.3E-05 1.4E-09 86.3 0.0 135 246-381 236-406 (584)
181 172 4U5L_A deltaIBB-importin-alpha 96.4 1.2E-05 1.4E-09 78.7 0.0 134 246-380 223-359 (426)
182 173 2JDQ_A IMPORTIN ALPHA-1 SUBUNI 96.3 1.3E-05 1.5E-09 79.6 0.0 366 245-716 64-446 (450)
183 174 3GQ2_A General vesicular trans 96.3 1.5E-05 1.5E-09 88.2 0.0 169 543-721 204-403 (651)
184 175 3GRL_A General vesicular trans 96.3 1.5E-05 1.5E-09 88.2 0.0 169 543-721 204-403 (651)
185 176 3TT9_A Plakophilin-2; CELL ADH 96.3 1.5E-05 1.7E-09 72.9 0.0 113 246-360 95-230 (233)
186 177 5D5K_C Importin subunit alpha- 96.3 1.5E-05 1.8E-09 79.2 0.0 113 246-359 273-386 (466)
187 178 4UAF_B Importin alpha 1 import 96.3 1.6E-05 1.8E-09 79.1 0.0 113 246-359 273-386 (466)
188 179 2JDQ_A IMPORTIN ALPHA-1 SUBUNI 96.2 1.8E-05 2.2E-09 78.4 0.0 134 246-380 235-371 (450)
189 180 3IFQ_A plakoglobin, E-cadherin 96.2 1.8E-05 2.2E-09 80.6 0.0 367 245-716 145-534 (553)
190 181 4BQK_A IMPORTIN SUBUNIT ALPHA- 96.2 1.9E-05 2.2E-09 78.5 0.0 116 245-360 172-287 (456)
191 182 4U5L_A deltaIBB-importin-alpha 96.2 2.2E-05 2.6E-09 76.7 0.0 115 245-360 180-294 (426)
192 183 4BPL_A IMPORTIN SUBUNIT ALPHA- 96.2 2.3E-05 2.7E-09 77.8 0.0 135 245-379 170-306 (454)
193 184 4MZ6_E Deoxyuridine 5'-triphos 96.1 2.6E-05 3.1E-09 79.0 0.0 113 246-359 317-430 (509)
194 185 5UMZ_B Importin subunit alpha- 96.1 2.6E-05 3.1E-09 79.0 0.0 113 246-359 317-430 (509)
195 186 4E4V_A Importin subunit alpha- 96.1 2.7E-05 3.1E-09 78.7 0.0 113 246-359 292-405 (485)
196 187 3GQ2_A General vesicular trans 96.1 3.4E-05 3.5E-09 85.2 0.0 176 543-726 56-255 (651)
197 188 3GRL_A General vesicular trans 96.1 3.4E-05 3.5E-09 85.2 0.0 176 543-726 56-255 (651)
198 189 4V3Q_A YIII_M4_AII; DE NOVO PR 96.0 3.4E-05 4E-09 69.7 0.0 112 246-358 135-246 (247)
199 190 4TNM_A Importin-alpha3 / MOS6; 96.0 3.5E-05 4E-09 79.5 0.0 136 245-380 245-382 (531)
200 191 4GMO_A Putative uncharacterize 95.9 5.4E-05 5.2E-09 85.2 0.0 94 245-339 34-129 (684)
201 192 4PLS_B Arm00010; PEPTIDE BINDI 95.9 4.9E-05 5.8E-09 69.4 0.0 134 246-380 86-221 (281)
202 193 5MFO_F YIIIM3AIII; Designed ar 95.9 5E-05 5.9E-09 65.8 0.0 112 246-358 89-200 (202)
203 194 2RU4_A Armadillo Repeat Protei 95.9 5.2E-05 6E-09 59.8 0.0 110 248-358 4-113 (115)
204 195 5AEI_B DESIGNED ARMADILLO REPE 95.9 5.1E-05 6.1E-09 69.5 0.0 114 246-360 47-160 (286)
205 196 5MFD_C YIIIM''6AII, Capsid dec 95.9 5.1E-05 6.1E-09 70.8 0.0 157 545-714 128-286 (328)
206 197 5MFO_E YIIIM3AIII; Designed ar 95.9 5.2E-05 6.2E-09 65.7 0.0 112 246-358 89-200 (202)
207 198 5D5K_C Importin subunit alpha- 95.8 5.5E-05 6.5E-09 74.9 0.0 158 544-714 138-302 (466)
208 199 1XQS_B HSPBP1 protein, Heat sh 95.8 5.9E-05 6.6E-09 71.4 0.0 116 246-362 109-225 (280)
209 200 4UAF_B Importin alpha 1 import 95.8 5.9E-05 7E-09 74.7 0.0 158 544-714 138-302 (466)
210 201 1XQR_A HspBP1 protein; armadil 95.8 6.4E-05 7E-09 72.7 0.0 116 246-362 125-241 (296)
211 202 6CRI_R Bone marrow stromal ant 95.8 6.2E-05 7.1E-09 78.2 0.0 151 547-721 414-577 (585)
212 203 6SA8_A ring-like DARPin-Armadi 95.8 6.8E-05 7.7E-09 80.4 0.0 136 245-381 262-399 (671)
213 204 5WBJ_A Regulatory-associated p 95.8 8.1E-05 7.9E-09 89.5 0.0 168 541-715 500-672 (1287)
214 205 5Z8H_A Adenomatous polyposis c 95.7 7.4E-05 8.5E-09 71.6 0.0 115 246-361 210-331 (339)
215 206 5WBK_A Regulatory-associated p 95.7 9.2E-05 9E-09 89.0 0.0 168 541-715 500-672 (1287)
216 207 6SA6_A DARPin-Armadillo fusion 95.7 8.4E-05 9.6E-09 73.2 0.0 135 245-380 241-377 (397)
217 208 2W3C_A GENERAL VESICULAR TRANS 95.6 0.00012 1.2E-08 79.1 0.0 136 246-382 9-168 (577)
218 209 6CRI_I Bone marrow stromal ant 95.6 0.0001 1.2E-08 74.8 0.0 106 244-360 72-177 (570)
219 210 1QBK_B STRUCTURE OF THE KARYOP 95.6 0.00011 1.3E-08 79.3 0.0 157 547-715 667-824 (890)
220 211 4P6Z_G BST2/tetherin, HIV-1 Vp 95.6 0.00012 1.3E-08 77.7 0.0 151 547-721 431-594 (627)
221 212 5MFI_B YIII(Dq.V2)4CqI, (KR)4; 95.5 0.00014 1.6E-08 65.0 0.0 112 246-358 131-242 (243)
222 213 5MFJ_B YIII(Dq.V2)4CqI, (KR)5; 95.5 0.00014 1.6E-08 65.0 0.0 112 246-358 131-242 (243)
223 214 5EWP_B Uncharacterized protein 95.4 0.00015 1.7E-08 67.3 0.0 134 246-380 87-233 (252)
224 215 4V3Q_A YIII_M4_AII; DE NOVO PR 95.4 0.00017 2E-08 64.8 0.0 134 246-380 51-186 (247)
225 216 3GQ2_A General vesicular trans 95.3 0.00022 2.3E-08 78.3 0.0 135 246-381 123-265 (651)
226 217 3GRL_A General vesicular trans 95.3 0.00022 2.3E-08 78.3 0.0 135 246-381 123-265 (651)
227 218 5AFF_A SYMPORTIN 1, RIBOSOMAL 95.2 0.00026 2.6E-08 78.8 0.0 94 245-339 12-107 (654)
228 219 6QH5_B AP-2 complex subunit al 95.2 0.00023 2.7E-08 73.0 0.0 107 243-360 84-190 (592)
229 220 3C2G_A Sys-1 protein, Pop-1 8- 95.2 0.00033 2.8E-08 77.7 0.0 189 260-486 185-412 (619)
230 221 4FDD_A Transportin-1, RNA-bind 95.1 0.00028 3.3E-08 75.3 0.0 157 547-715 629-786 (852)
231 222 4P6Z_B BST2/tetherin, HIV-1 Vp 95.0 0.00031 3.6E-08 72.5 0.0 106 244-360 101-206 (600)
232 223 2JKT_A AP-2 COMPLEX SUBUNIT AL 95.0 0.00032 3.7E-08 73.5 0.0 144 547-714 441-590 (623)
233 224 5IZ8_A Adenomatous polyposis c 95.0 0.00036 4.1E-08 67.8 0.0 162 543-716 166-337 (354)
234 225 5IZA_A Adenomatous polyposis c 94.9 0.00036 4.1E-08 67.8 0.0 162 543-716 166-337 (354)
235 226 5YVI_A Transportin-1, RNA-bind 94.9 0.00036 4.3E-08 74.5 0.0 156 547-714 645-801 (868)
236 227 6QH7_A AP-2 complex subunit al 94.9 0.00038 4.3E-08 73.0 0.0 108 242-360 108-217 (621)
237 228 1B3U_A PROTEIN PHOSPHATASE PP2 94.9 0.0004 4.8E-08 70.1 0.0 146 547-712 441-586 (588)
238 229 4HM9_A Beta-catenin-like prote 94.8 0.00057 5.4E-08 75.0 0.0 161 543-716 241-424 (568)
239 230 6QH5_A AP-2 complex subunit al 94.8 0.00048 5.5E-08 72.2 0.0 144 548-715 442-591 (621)
240 231 5MFO_F YIIIM3AIII; Designed ar 94.7 0.00052 6.2E-08 58.9 0.0 134 246-380 47-182 (202)
241 232 5MFO_E YIIIM3AIII; Designed ar 94.7 0.00054 6.3E-08 58.8 0.0 134 246-380 47-182 (202)
242 233 4MFU_A Beta-catenin-like prote 94.6 0.00067 6.6E-08 72.8 0.0 161 543-716 163-346 (490)
243 234 2NYL_A Protein phosphatase 2, 94.6 0.00059 7.1E-08 68.5 0.0 145 548-712 436-580 (582)
244 235 4U2X_F eVP24, KPNA5C; eVP24, i 94.4 0.00082 9.5E-08 57.1 0.0 73 246-318 51-124 (175)
245 236 3SL9_B Catenin beta-1, B-cell 94.3 0.00082 9.5E-08 56.5 0.0 110 246-357 56-166 (167)
246 237 4I5L_D PP2A A alpha subunit (9 94.3 0.0008 9.6E-08 67.6 0.0 110 246-359 239-349 (584)
247 238 4U2X_E eVP24, KPNA5C; eVP24, i 94.3 0.00091 1E-07 56.8 0.0 73 246-318 51-124 (175)
248 239 4UQI_B AP-2 COMPLEX SUBUNIT AL 94.2 0.00095 1.1E-07 70.3 0.0 106 244-360 85-190 (657)
249 240 5KC2_B Phosphatidylinositol 3- 94.0 0.0013 1.4E-07 79.1 0.0 155 544-715 506-689 (1454)
250 241 3SL9_E Catenin beta-1, B-cell 94.0 0.0012 1.4E-07 55.4 0.0 110 246-357 56-166 (167)
251 242 3VWA_B Cytoplasmic export prot 93.8 0.0017 1.8E-07 68.9 0.0 150 546-714 379-529 (560)
252 243 5DFZ_B Vacuolar protein sortin 93.7 0.0018 1.8E-07 77.7 0.0 155 546-719 608-762 (1460)
253 244 6HWP_A A3_bGFPD; alphaRep, art 93.7 0.0016 1.9E-07 62.8 0.0 91 245-358 23-113 (409)
254 245 3TT9_A Plakophilin-2; CELL ADH 93.7 0.0017 1.9E-07 58.2 0.0 169 542-716 47-232 (233)
255 246 3VWA_A Cytoplasmic export prot 93.6 0.0019 2E-07 68.6 0.0 152 545-715 378-530 (560)
256 247 1XQR_A HspBP1 protein; armadil 93.6 0.0019 2.1E-07 61.7 0.0 122 257-380 52-177 (296)
257 248 1XQS_B HSPBP1 protein, Heat sh 93.4 0.0023 2.6E-07 59.7 0.0 123 257-380 36-161 (280)
258 249 5VOZ_P V-type proton ATPase ca 93.3 0.0027 2.7E-07 67.5 0.0 330 290-714 78-475 (478)
259 250 5D80_H V-type proton ATPase ca 93.3 0.0027 2.7E-07 67.5 0.0 330 290-714 78-475 (478)
260 251 1F59_B IMPORTIN BETA-1/FXFG NU 93.3 0.0024 2.8E-07 62.2 0.0 154 549-713 261-437 (442)
261 252 6XTE_A Importin-5, antipain; h 93.2 0.0025 2.9E-07 70.4 0.0 153 548-714 358-521 (1096)
262 253 4HXT_A De Novo Protein OR329; 93.2 0.0025 3E-07 56.2 0.0 134 246-380 87-222 (252)
263 254 5IFE_C Splicing factor 3B subu 93.2 0.0029 3E-07 75.0 0.0 153 548-714 932-1087(1304)
264 255 6AHD_1 Pre-mRNA-processing-spl 93.2 0.0029 3E-07 75.0 0.0 153 548-714 932-1087(1304)
265 256 6QH5_B AP-2 complex subunit al 93.1 0.0027 3.1E-07 64.6 0.0 146 548-714 428-573 (592)
266 257 6EN4_C Splicing factor 3B subu 92.9 0.0031 3.6E-07 67.4 0.0 154 548-714 480-635 (852)
267 258 6SA6_A DARPin-Armadillo fusion 92.9 0.0032 3.7E-07 61.0 0.0 112 246-358 284-395 (397)
268 259 6FT5_A A3_A3; alphaRep, artifi 92.9 0.0032 3.7E-07 60.7 0.0 91 245-358 23-113 (409)
269 260 3C5W_A PP2A A subunit, PP2A C; 92.9 0.0032 3.8E-07 54.7 0.0 146 548-713 86-231 (232)
270 261 4LAC_A Serine/threonine-protei 92.9 0.0033 3.8E-07 56.3 0.0 110 545-670 31-140 (258)
271 262 4FDD_A Transportin-1, RNA-bind 92.6 0.0039 4.6E-07 65.8 0.0 150 548-712 360-511 (852)
272 263 5NR4_A CLIP-associating protei 92.6 0.004 4.6E-07 54.4 0.0 148 548-715 53-200 (230)
273 264 3C5W_A PP2A A subunit, PP2A C; 92.5 0.0041 4.8E-07 53.9 0.0 107 548-670 8-114 (232)
274 265 6XU2_A Importin-5, antipain; h 92.5 0.0042 4.9E-07 68.8 0.0 152 548-713 377-539 (1115)
275 266 4LAC_A Serine/threonine-protei 92.5 0.0043 5E-07 55.5 0.0 146 548-713 112-257 (258)
276 267 6EN4_C Splicing factor 3B subu 92.5 0.0043 5E-07 66.2 0.0 147 547-714 675-823 (852)
277 268 1QBK_B STRUCTURE OF THE KARYOP 92.4 0.0043 5.1E-07 66.1 0.0 151 548-713 398-550 (890)
278 269 6CRI_I Bone marrow stromal ant 92.4 0.0043 5.1E-07 62.1 0.0 145 548-714 415-560 (570)
279 270 2RU4_B Armadillo Repeat Protei 92.4 0.0045 5.2E-07 45.3 0.0 71 287-358 12-82 (84)
280 271 4L7M_A Putative uncharacterize 92.3 0.0047 5.5E-07 55.6 0.0 75 545-625 35-109 (269)
281 272 5WBJ_A Regulatory-associated p 92.2 0.0059 5.8E-07 72.7 0.0 100 561-671 612-725 (1287)
282 273 5WBK_A Regulatory-associated p 92.2 0.0059 5.8E-07 72.7 0.0 101 560-671 611-725 (1287)
283 274 2QK2_A LP04448p; Mini spindles 92.2 0.005 5.8E-07 54.5 0.0 145 548-714 16-163 (242)
284 275 3W3U_A Importin subunit beta-3 92.2 0.005 5.8E-07 67.5 0.0 115 245-360 397-512 (1078)
285 276 2IW3_B ELONGATION FACTOR 3A; A 92.0 0.0058 6.5E-07 68.1 0.0 148 548-713 176-324 (986)
286 277 4G3A_B CLIP-associating protei 91.9 0.0059 6.8E-07 54.0 0.0 150 547-714 7-158 (237)
287 278 5EWP_B Uncharacterized protein 91.9 0.0062 6.9E-07 55.7 0.0 176 528-716 7-209 (252)
288 279 4QMI_B Cytoskeleton-associated 91.9 0.006 6.9E-07 54.1 0.0 147 548-715 60-208 (240)
289 280 4QMJ_A Cytoskeleton-associated 91.9 0.006 6.9E-07 54.1 0.0 147 548-715 60-208 (240)
290 281 5XAH_A Importin-4; Histone, Ch 91.8 0.0062 7.2E-07 58.5 0.0 153 548-714 235-389 (416)
291 282 5XAH_C Importin-4; Histone, Ch 91.8 0.0062 7.2E-07 58.5 0.0 153 548-714 235-389 (416)
292 283 2QK1_A Protein STU2; stu2, Stu 91.8 0.0063 7.3E-07 53.8 0.0 152 548-714 17-176 (249)
293 284 5H2V_A Importin subunit beta-3 91.8 0.0063 7.4E-07 66.7 0.0 114 246-360 398-512 (1078)
294 285 6OWT_A AP-2 complex subunit al 91.7 0.0072 7.8E-07 67.7 0.0 142 548-713 442-589 (939)
295 286 2P8Q_A Importin beta-1 subunit 91.7 0.0066 7.8E-07 64.5 0.0 160 548-715 650-829 (876)
296 287 5MFO_F YIIIM3AIII; Designed ar 91.6 0.0068 8E-07 51.3 0.0 157 546-715 3-161 (202)
297 288 5MFO_E YIIIM3AIII; Designed ar 91.6 0.007 8.3E-07 51.2 0.0 157 546-715 3-161 (202)
298 289 2QNA_A Importin subunit beta-1 91.5 0.0073 8.6E-07 62.8 0.0 159 548-714 525-703 (762)
299 290 6G4J_B Probable serine/threoni 91.5 0.008 8.8E-07 50.6 0.0 132 548-723 15-146 (148)
300 291 3W3W_A Importin subunit beta-3 91.3 0.0081 9.5E-07 65.7 0.0 98 609-715 821-920 (1078)
301 292 3ND2_A Importin subunit beta-1 91.2 0.0083 9.8E-07 63.2 0.0 152 548-713 598-763 (861)
302 293 5OWU_A Importin subunit beta-1 91.2 0.0083 9.8E-07 63.2 0.0 152 548-713 598-763 (861)
303 294 5DFZ_B Vacuolar protein sortin 91.0 0.011 1.1E-06 70.6 0.0 159 546-714 463-639 (1460)
304 295 3W3U_A Importin subunit beta-3 90.7 0.011 1.3E-06 64.7 0.0 157 548-713 440-600 (1078)
305 296 1QGR_A IMPORTIN BETA SUBUNIT, 90.6 0.011 1.3E-06 62.8 0.0 113 246-360 367-480 (876)
306 297 4QMH_A LP04448p; PROTEIN BINDI 90.4 0.012 1.4E-06 51.8 0.0 149 548-715 58-209 (241)
307 298 5A1V_E ADP-RIBOSYLATION FACTOR 90.4 0.013 1.4E-06 64.9 0.0 102 244-359 67-168 (874)
308 299 5NZR_G Coatomer subunit alpha, 90.4 0.013 1.4E-06 64.9 0.0 102 244-359 67-168 (874)
309 300 3W3W_A Importin subunit beta-3 90.3 0.013 1.5E-06 64.1 0.0 157 547-714 439-601 (1078)
310 301 5H2V_A Importin subunit beta-3 90.2 0.013 1.5E-06 64.0 0.0 158 547-714 439-601 (1078)
311 302 4NEE_G AP-2 complex subunit si 90.1 0.014 1.6E-06 56.7 0.0 141 548-714 77-219 (398)
312 303 6MQ5_A CLIP-associating protei 90.0 0.015 1.7E-06 52.9 0.0 111 548-670 4-120 (257)
313 304 4UQI_B AP-2 COMPLEX SUBUNIT AL 90.0 0.015 1.7E-06 60.6 0.0 109 245-359 160-268 (657)
314 305 4XRI_A Importin Beta; Transpor 89.9 0.014 1.7E-06 61.5 0.0 159 548-715 651-826 (882)
315 306 4NEE_B AP-2 complex subunit si 89.8 0.016 1.8E-06 56.6 0.0 141 548-714 77-219 (398)
316 307 6EN4_C Splicing factor 3B subu 89.8 0.015 1.8E-06 61.6 0.0 153 548-714 397-551 (852)
317 308 5A1V_E ADP-RIBOSYLATION FACTOR 89.6 0.018 1.9E-06 63.8 0.0 141 548-714 397-538 (874)
318 309 5NZR_G Coatomer subunit alpha, 89.6 0.018 1.9E-06 63.8 0.0 141 548-714 397-538 (874)
319 310 6OWT_A AP-2 complex subunit al 89.5 0.018 2E-06 64.2 0.0 98 250-360 79-178 (939)
320 311 5KC2_B Phosphatidylinositol 3- 89.3 0.021 2.1E-06 68.3 0.0 151 548-714 424-610 (1454)
321 312 2P8Q_A Importin beta-1 subunit 89.3 0.018 2.1E-06 60.9 0.0 154 548-714 367-538 (876)
322 313 2QNA_A Importin subunit beta-1 89.1 0.019 2.3E-06 59.4 0.0 115 245-360 3-122 (762)
323 314 1IBR_B RAN IMPORTIN BETA SUBU 89.1 0.019 2.3E-06 55.6 0.0 154 548-714 129-289 (462)
324 315 1QGR_A IMPORTIN BETA SUBUNIT, 88.9 0.021 2.4E-06 60.6 0.0 154 548-714 367-538 (876)
325 316 2DB0_A 253aa long hypothetical 88.9 0.021 2.4E-06 50.5 0.0 141 548-715 108-248 (253)
326 317 2DB0_B 253aa long hypothetical 88.9 0.021 2.4E-06 50.5 0.0 141 548-715 108-248 (253)
327 318 4K92_B CLIP-associating protei 88.8 0.022 2.5E-06 52.5 0.0 148 548-714 90-237 (273)
328 319 6MQ7_B CLIP-associating protei 88.8 0.022 2.5E-06 52.5 0.0 148 548-714 90-237 (273)
329 320 1GCJ_B IMPORTIN-BETA; HEAT REP 88.7 0.022 2.5E-06 55.4 0.0 154 548-714 135-295 (460)
330 321 1F59_B IMPORTIN BETA-1/FXFG NU 88.7 0.022 2.6E-06 54.8 0.0 154 548-714 129-289 (442)
331 322 1UKL_A Importin beta-1 subunit 88.6 0.022 2.6E-06 60.2 0.0 113 246-360 367-480 (876)
332 323 1U6G_C Cullin homolog 1, RING- 88.2 0.025 2.9E-06 62.9 0.0 146 548-714 891-1036(1230)
333 324 4MFU_A Beta-catenin-like prote 88.1 0.031 3.1E-06 59.1 0.0 135 246-381 69-222 (490)
334 325 6CRI_I Bone marrow stromal ant 87.6 0.03 3.5E-06 55.5 0.0 141 548-714 37-177 (570)
335 326 3QML_D 78 kDa glucose-regulate 87.5 0.038 3.6E-06 55.4 0.0 165 534-712 56-246 (315)
336 327 5IFE_C Splicing factor 3B subu 87.4 0.036 3.7E-06 65.2 0.0 154 547-714 848-1003(1304)
337 328 6AHD_1 Pre-mRNA-processing-spl 87.4 0.036 3.7E-06 65.2 0.0 154 547-714 848-1003(1304)
338 329 5MU7_A Coatomer subunit beta, 87.4 0.031 3.7E-06 52.4 0.0 141 549-716 190-331 (373)
339 330 5VE8_B Kap123, Histone H3; Bid 87.4 0.031 3.7E-06 61.1 0.0 154 549-714 868-1034(1116)
340 331 2IX8_A ELONGATION FACTOR 3A; N 87.3 0.034 3.8E-06 61.3 0.0 150 547-713 48-198 (976)
341 332 3WOY_A CLIP-associating protei 87.3 0.034 3.8E-06 50.1 0.0 147 548-714 78-225 (251)
342 333 5DN7_A Protein FAM179B; TOG do 87.2 0.035 3.9E-06 52.0 0.0 146 548-714 67-212 (293)
343 334 4HM9_A Beta-catenin-like prote 87.2 0.04 3.9E-06 59.6 0.0 135 246-381 147-300 (568)
344 335 6S47_Bi 60S ribosomal protein 87.2 0.035 3.9E-06 61.2 0.0 155 546-713 42-198 (972)
345 336 6QH5_B AP-2 complex subunit al 87.1 0.034 4E-06 55.8 0.0 142 548-715 50-191 (592)
346 337 5A1V_G ADP-RIBOSYLATION FACTOR 87.1 0.037 4E-06 61.9 0.0 105 547-670 259-364 (968)
347 338 3TJZ_B ADP-ribosylation factor 87.0 0.036 4.1E-06 52.5 0.0 16 697-712 225-240 (355)
348 339 2IW3_B ELONGATION FACTOR 3A; A 86.9 0.037 4.1E-06 61.1 0.0 151 547-714 54-205 (986)
349 340 5NZR_B Coatomer subunit alpha, 86.8 0.04 4.3E-06 61.6 0.0 105 547-670 259-364 (968)
350 341 4P6Z_B BST2/tetherin, HIV-1 Vp 86.8 0.037 4.3E-06 55.9 0.0 142 548-715 66-207 (600)
351 342 5VCH_A Kap123; Bidding yeast k 86.7 0.038 4.4E-06 60.5 0.0 153 550-714 869-1034(1116)
352 343 6BCU_A mTOR, Target of rapamyc 86.7 0.04 4.4E-06 67.9 0.0 131 549-694 952-1084(2549)
353 344 6BCX_B mTOR, Target of rapamyc 86.7 0.04 4.4E-06 67.9 0.0 131 549-694 952-1084(2549)
354 345 5IFE_C Splicing factor 3B subu 86.4 0.045 4.7E-06 64.2 0.0 110 249-359 935-1044(1304)
355 346 6AHD_1 Pre-mRNA-processing-spl 86.4 0.045 4.7E-06 64.2 0.0 110 249-359 935-1044(1304)
356 347 6LTJ_L Histone H3.2, Histone H 86.4 0.056 4.7E-06 63.5 0.0 152 563-723 1065-1263(1295)
357 348 6CRI_R Bone marrow stromal ant 86.2 0.043 4.9E-06 55.5 0.0 139 548-714 63-201 (585)
358 349 5DFZ_B Vacuolar protein sortin 85.9 0.051 5.3E-06 64.4 0.0 292 245-645 464-781 (1460)
359 350 2QNA_A Importin subunit beta-1 85.8 0.046 5.4E-06 56.3 0.0 154 548-714 4-164 (762)
360 351 3WOZ_C CLIP-associating protei 85.7 0.049 5.4E-06 48.6 0.0 154 547-716 5-159 (232)
361 352 3WOZ_D CLIP-associating protei 85.7 0.049 5.4E-06 48.6 0.0 154 547-716 5-159 (232)
362 353 5DCQ_C artificial repeat prote 85.5 0.051 5.7E-06 45.4 0.0 47 654-712 120-166 (170)
363 354 4L7M_A Putative uncharacterize 85.3 0.051 6E-06 48.1 0.0 143 548-713 120-265 (269)
364 355 4P6Z_B BST2/tetherin, HIV-1 Vp 85.1 0.053 6.2E-06 54.6 0.0 109 245-359 176-284 (600)
365 356 5MU7_A Coatomer subunit beta, 85.1 0.053 6.2E-06 50.7 0.0 101 598-714 191-292 (373)
366 357 4UQI_B AP-2 COMPLEX SUBUNIT AL 85.0 0.056 6.3E-06 55.9 0.0 142 548-715 50-191 (657)
367 358 6MZE_Z Tubulin alpha-1A chain, 84.9 0.055 6.4E-06 53.4 0.0 149 548-715 340-496 (536)
368 359 4MFU_A Beta-catenin-like prote 84.8 0.067 6.5E-06 56.4 0.0 117 610-733 42-175 (490)
369 360 5N3U_B Phycocyanobilin lyase s 84.6 0.06 6.9E-06 46.1 0.0 135 547-714 32-167 (208)
370 361 6QH5_B AP-2 complex subunit al 84.4 0.06 7E-06 53.8 0.0 145 548-713 122-268 (592)
371 362 2DB0_A 253aa long hypothetical 84.4 0.062 7.1E-06 47.2 0.0 104 547-670 32-136 (253)
372 363 2DB0_B 253aa long hypothetical 84.4 0.062 7.1E-06 47.2 0.0 104 547-670 32-136 (253)
373 364 2JKT_A AP-2 COMPLEX SUBUNIT AL 84.2 0.064 7.3E-06 54.8 0.0 140 548-713 75-216 (623)
374 365 3LTJ_A AlphaRep-4; protein eng 84.1 0.065 7.5E-06 45.7 0.0 28 685-713 140-167 (201)
375 366 4P6Z_B BST2/tetherin, HIV-1 Vp 84.1 0.065 7.5E-06 54.0 0.0 145 548-713 138-284 (600)
376 367 6QH7_A AP-2 complex subunit al 84.0 0.067 7.6E-06 54.8 0.0 140 548-713 75-216 (621)
377 368 6CRI_R Bone marrow stromal ant 83.9 0.067 7.7E-06 53.9 0.0 67 548-625 135-201 (585)
378 369 4UQI_B AP-2 COMPLEX SUBUNIT AL 83.9 0.069 7.8E-06 55.2 0.0 145 548-713 122-268 (657)
379 370 5XAH_A Importin-4; Histone, Ch 83.5 0.071 8.2E-06 50.5 0.0 142 561-715 163-307 (416)
380 371 5XAH_C Importin-4; Histone, Ch 83.5 0.071 8.2E-06 50.5 0.0 142 561-715 163-307 (416)
381 372 5FRS_A SISTER CHROMATID COHESI 83.5 0.08 8.3E-06 57.5 0.0 149 548-715 282-431 (703)
382 373 4HM9_A Beta-catenin-like prote 83.5 0.087 8.3E-06 56.8 0.0 136 246-381 198-350 (568)
383 374 5FRP_A SISTER CHROMATID COHESI 83.4 0.082 8.4E-06 57.5 0.0 149 548-715 282-431 (703)
384 375 5GM6_G Prp8, Brr2, Snu114, Rse 83.4 0.077 8.4E-06 58.7 0.0 69 248-316 603-671 (971)
385 376 5ZWM_1 Pre-mRNA-splicing facto 83.4 0.077 8.4E-06 58.7 0.0 69 248-316 603-671 (971)
386 377 3TJZ_B ADP-ribosylation factor 83.4 0.075 8.5E-06 50.1 0.0 102 596-712 251-352 (355)
387 378 6CRI_R Bone marrow stromal ant 83.3 0.075 8.6E-06 53.5 0.0 101 246-359 100-200 (585)
388 379 6U62_A Regulatory-associated p 83.0 0.095 9E-06 62.5 0.0 159 544-715 468-630 (1392)
389 380 6BCX_W mTOR, Target of rapamyc 82.8 0.098 9.3E-06 62.1 0.0 159 544-715 476-638 (1343)
390 381 4QMH_A LP04448p; PROTEIN BINDI 82.8 0.081 9.4E-06 46.0 0.0 114 595-716 17-130 (241)
391 382 6QH5_A AP-2 complex subunit al 82.8 0.083 9.4E-06 54.0 0.0 140 548-713 75-216 (621)
392 383 6EMK_C Serine/threonine-protei 82.8 0.086 9.4E-06 64.9 0.0 71 548-625 922-993 (2474)
393 384 5MU7_A Coatomer subunit beta, 82.7 0.082 9.5E-06 49.3 0.0 71 548-624 39-110 (373)
394 385 6CRI_I Bone marrow stromal ant 82.7 0.081 9.6E-06 52.1 0.0 145 548-713 109-255 (570)
395 386 4QMI_B Cytoskeleton-associated 82.6 0.084 9.7E-06 46.0 0.0 112 595-715 19-131 (240)
396 387 4QMJ_A Cytoskeleton-associated 82.6 0.084 9.7E-06 46.0 0.0 112 595-715 19-131 (240)
397 388 6MZG_E Tubulin alpha-1A chain, 82.5 0.084 9.8E-06 52.4 0.0 147 549-715 315-466 (554)
398 389 1B3U_A PROTEIN PHOSPHATASE PP2 82.3 0.085 1E-05 51.8 0.0 147 547-713 164-310 (588)
399 390 2OF3_A ZYG-9; Multifunctional 82.0 0.098 1.1E-05 48.1 0.0 150 548-714 88-237 (266)
400 391 4I5L_D PP2A A alpha subunit (9 81.8 0.092 1.1E-05 51.5 0.0 147 547-713 160-306 (584)
401 392 4Y5J_A Mini spindles TOG3; XMA 81.7 0.097 1.1E-05 46.2 0.0 71 548-625 15-89 (248)
402 393 4P6Z_G BST2/tetherin, HIV-1 Vp 81.6 0.1 1.1E-05 53.7 0.0 137 549-713 81-217 (627)
403 394 5KC2_B Phosphatidylinositol 3- 81.5 0.11 1.2E-05 61.5 0.0 126 247-379 621-746 (1454)
404 395 6MZG_E Tubulin alpha-1A chain, 81.1 0.1 1.2E-05 51.7 0.0 151 550-714 57-211 (554)
405 396 6MZE_Z Tubulin alpha-1A chain, 81.1 0.1 1.2E-05 51.2 0.0 108 600-714 300-412 (536)
406 397 6RXU_UJ Periodic tryptophan pr 80.9 0.12 1.2E-05 62.5 0.0 152 548-713 1625-1791(1802)
407 398 5FVM_B SERINE/THREONINE-PROTEI 80.8 0.12 1.3E-05 63.5 0.0 147 548-714 1008-1155(2471)
408 399 6GWC_C Tubulin alpha chain, Tu 80.7 0.11 1.3E-05 45.3 0.0 49 654-714 120-168 (232)
409 400 1OYZ_A X-RAY STRUCTURE OF YB61 80.6 0.11 1.3E-05 46.1 0.0 64 549-623 92-156 (280)
410 401 6GX7_F Tubulin alpha chain, Tu 80.5 0.12 1.3E-05 44.1 0.0 122 548-713 46-167 (201)
411 402 2NYL_A Protein phosphatase 2, 80.4 0.11 1.3E-05 50.7 0.0 147 547-713 158-304 (582)
412 403 5VJC_B Protein mini spindles; 80.3 0.12 1.4E-05 47.2 0.0 72 547-625 50-121 (271)
413 404 6RXV_UJ Periodic tryptophan pr 80.3 0.13 1.4E-05 62.1 0.0 152 548-713 1625-1791(1802)
414 405 4I5L_D PP2A A alpha subunit (9 80.2 0.11 1.4E-05 50.8 0.0 109 547-670 238-349 (584)
415 406 1IBR_B RAN IMPORTIN BETA SUBU 80.2 0.12 1.4E-05 49.6 0.0 156 549-716 261-440 (462)
416 407 1B3U_A PROTEIN PHOSPHATASE PP2 80.1 0.12 1.4E-05 50.8 0.0 109 547-670 242-353 (588)
417 408 4P6Z_G BST2/tetherin, HIV-1 Vp 80.0 0.13 1.4E-05 52.9 0.0 67 548-625 152-218 (627)
418 409 5NR4_A CLIP-associating protei 80.0 0.12 1.4E-05 44.1 0.0 109 244-360 51-159 (230)
419 410 2P8Q_A Importin beta-1 subunit 79.9 0.12 1.4E-05 54.0 0.0 154 548-714 129-289 (876)
420 411 4I5L_D PP2A A alpha subunit (9 79.9 0.12 1.4E-05 50.6 0.0 147 547-713 320-466 (584)
421 412 1QGR_A IMPORTIN BETA SUBUNIT, 79.8 0.12 1.4E-05 54.2 0.0 154 548-714 129-289 (876)
422 413 1B3U_A PROTEIN PHOSPHATASE PP2 79.8 0.12 1.5E-05 50.6 0.0 146 547-712 324-469 (588)
423 414 6MZE_Z Tubulin alpha-1A chain, 79.7 0.13 1.5E-05 50.5 0.0 152 550-715 57-212 (536)
424 415 5F0N_A cohesin subunit Pds5, K 79.1 0.17 1.6E-05 59.2 0.0 150 547-714 271-420 (1175)
425 416 4NEE_G AP-2 complex subunit si 78.8 0.15 1.7E-05 48.9 0.0 115 548-671 149-273 (398)
426 417 3W3U_A Importin subunit beta-3 78.8 0.14 1.7E-05 55.2 0.0 158 548-714 849-1007(1078)
427 418 4NEE_B AP-2 complex subunit si 78.7 0.15 1.7E-05 49.0 0.0 115 548-671 149-273 (398)
428 419 3DAD_A FH1/FH2 domain-containi 78.5 0.18 1.7E-05 50.5 0.0 154 565-729 135-309 (339)
429 420 5VJC_A Protein mini spindles; 78.4 0.16 1.7E-05 46.5 0.0 73 546-625 49-121 (271)
430 421 5WBJ_A Regulatory-associated p 78.3 0.18 1.8E-05 59.3 0.0 156 548-716 467-631 (1287)
431 422 5WBK_A Regulatory-associated p 78.3 0.18 1.8E-05 59.3 0.0 156 548-716 467-631 (1287)
432 423 6EN4_C Splicing factor 3B subu 78.2 0.15 1.8E-05 53.3 0.0 154 548-715 192-347 (852)
433 424 5F0O_A cohesin subunit Pds5, K 78.2 0.18 1.8E-05 58.5 0.0 150 547-714 280-429 (1133)
434 425 2NYL_A Protein phosphatase 2, 77.8 0.16 1.9E-05 49.5 0.0 109 547-670 236-347 (582)
435 426 3W3W_A Importin subunit beta-3 77.6 0.16 1.9E-05 54.7 0.0 157 548-714 849-1007(1078)
436 427 4LAC_A Serine/threonine-protei 77.5 0.17 1.9E-05 44.2 0.0 115 239-360 27-141 (258)
437 428 6FT5_A A3_A3; alphaRep, artifi 77.5 0.17 1.9E-05 47.7 0.0 60 547-623 54-113 (409)
438 429 1F59_B IMPORTIN BETA-1/FXFG NU 77.4 0.17 2E-05 48.1 0.0 158 547-714 35-204 (442)
439 430 2NYL_A Protein phosphatase 2, 77.3 0.16 2E-05 49.4 0.0 70 547-625 318-387 (582)
440 431 5FVM_B SERINE/THREONINE-PROTEI 77.2 0.18 2E-05 61.6 0.0 71 548-625 925-996 (2471)
441 432 3LTJ_A AlphaRep-4; protein eng 77.2 0.18 2E-05 42.7 0.0 121 548-712 77-197 (201)
442 433 5JO8_A CEP104; centriolar prot 77.2 0.18 2E-05 46.5 0.0 155 548-714 87-245 (279)
443 434 4P6Z_G BST2/tetherin, HIV-1 Vp 77.2 0.18 2E-05 51.7 0.0 101 246-359 117-217 (627)
444 435 1GCJ_B IMPORTIN-BETA; HEAT REP 77.2 0.17 2E-05 48.4 0.0 154 549-714 267-444 (460)
445 436 6GWC_C Tubulin alpha chain, Tu 76.9 0.18 2.1E-05 43.9 0.0 121 548-712 108-228 (232)
446 437 3QML_D 78 kDa glucose-regulate 76.8 0.22 2.1E-05 49.4 0.0 104 609-717 42-154 (315)
447 438 4G3A_B CLIP-associating protei 76.8 0.18 2.1E-05 43.5 0.0 113 244-358 6-118 (237)
448 439 6IDX_A Engulfment and cell mot 76.8 0.22 2.1E-05 52.8 0.0 157 563-731 102-272 (524)
449 440 6IE1_A Engulfment and cell mot 76.8 0.22 2.1E-05 52.8 0.0 157 563-731 102-272 (524)
450 441 5H2V_A Importin subunit beta-3 76.6 0.18 2.1E-05 54.2 0.0 157 548-714 849-1007(1078)
451 442 1TE4_A conserved protein MTH18 76.5 0.19 2.2E-05 39.5 0.0 118 548-710 13-130 (131)
452 443 6S47_Bi 60S ribosomal protein 76.5 0.2 2.2E-05 54.8 0.0 155 548-714 127-321 (972)
453 444 1OYZ_A X-RAY STRUCTURE OF YB61 76.4 0.19 2.2E-05 44.5 0.0 96 596-712 91-187 (280)
454 445 5NR4_A CLIP-associating protei 76.2 0.19 2.2E-05 42.7 0.0 111 595-713 6-122 (230)
455 446 5A1V_E ADP-RIBOSYLATION FACTOR 75.9 0.22 2.3E-05 54.5 0.0 137 548-713 69-205 (874)
456 447 5NZR_G Coatomer subunit alpha, 75.9 0.22 2.3E-05 54.5 0.0 137 548-713 69-205 (874)
457 448 6HWP_A A3_bGFPD; alphaRep, art 75.5 0.21 2.4E-05 46.8 0.0 49 654-714 129-177 (409)
458 449 3W3U_A Importin subunit beta-3 75.5 0.21 2.4E-05 53.8 0.0 152 549-714 358-512 (1078)
459 450 4QMI_B Cytoskeleton-associated 75.5 0.21 2.4E-05 43.2 0.0 107 245-360 59-167 (240)
460 451 4QMJ_A Cytoskeleton-associated 75.5 0.21 2.4E-05 43.2 0.0 107 245-360 59-167 (240)
461 452 2IX8_A ELONGATION FACTOR 3A; N 75.4 0.22 2.4E-05 54.3 0.0 153 548-713 128-318 (976)
462 453 5XAH_A Importin-4; Histone, Ch 75.4 0.21 2.4E-05 46.9 0.0 162 548-713 33-222 (416)
463 454 5XAH_C Importin-4; Histone, Ch 75.4 0.21 2.4E-05 46.9 0.0 162 548-713 33-222 (416)
464 455 5H2V_A Importin subunit beta-3 75.1 0.22 2.5E-05 53.6 0.0 154 548-714 357-512 (1078)
465 456 6OWT_A AP-2 complex subunit al 75.0 0.24 2.6E-05 54.6 0.0 140 548-713 75-216 (939)
466 457 4G3A_B CLIP-associating protei 74.9 0.22 2.6E-05 42.9 0.0 107 548-671 91-198 (237)
467 458 4XL5_C Green fluorescent prote 74.6 0.23 2.7E-05 43.8 0.0 121 548-712 139-259 (263)
468 459 4FDD_A Transportin-1, RNA-bind 74.5 0.23 2.7E-05 51.3 0.0 155 548-714 129-286 (852)
469 460 4D4Z_A DEOXYHYPUSINE HYDROXYLA 74.4 0.23 2.7E-05 44.2 0.0 124 546-711 9-134 (294)
470 461 4D50_A DEOXYHYPUSINE HYDROXYLA 74.4 0.23 2.7E-05 44.2 0.0 124 546-711 9-134 (294)
471 462 6QH5_A AP-2 complex subunit al 74.2 0.24 2.8E-05 50.3 0.0 69 548-625 147-217 (621)
472 463 5LPH_B Centrosomal protein of 74.0 0.26 2.8E-05 45.9 0.0 155 549-714 94-251 (288)
473 464 1QBK_B STRUCTURE OF THE KARYOP 73.9 0.24 2.8E-05 51.6 0.0 156 548-715 129-287 (890)
474 465 3W3W_A Importin subunit beta-3 73.9 0.24 2.9E-05 53.2 0.0 153 548-714 357-512 (1078)
475 466 1IBR_B RAN IMPORTIN BETA SUBU 73.6 0.25 2.9E-05 47.1 0.0 158 547-714 35-204 (462)
476 467 5VCH_A Kap123; Bidding yeast k 73.4 0.26 3E-05 53.4 0.0 153 548-714 361-516 (1116)
477 468 6QH7_A AP-2 complex subunit al 73.4 0.26 3E-05 50.0 0.0 69 548-625 147-217 (621)
478 469 2JKT_A AP-2 COMPLEX SUBUNIT AL 73.3 0.27 3E-05 49.9 0.0 69 548-625 147-217 (623)
479 470 1GCJ_B IMPORTIN-BETA; HEAT REP 73.0 0.27 3.1E-05 47.0 0.0 158 547-714 41-210 (460)
480 471 1OYZ_A X-RAY STRUCTURE OF YB61 73.0 0.27 3.1E-05 43.4 0.0 121 547-710 159-279 (280)
481 472 2JKT_A AP-2 COMPLEX SUBUNIT AL 72.8 0.28 3.2E-05 49.7 0.0 67 548-623 330-397 (623)
482 473 5VE8_B Kap123, Histone H3; Bid 72.7 0.27 3.2E-05 53.1 0.0 153 548-714 361-516 (1116)
483 474 4ZV6_A AlphaRep-7, Octarellin 71.7 0.3 3.5E-05 43.7 0.0 29 685-714 140-168 (294)
484 475 6BZX_A alpha-Rep, Octarellin V 71.4 0.31 3.6E-05 43.6 0.0 29 685-714 140-168 (294)
485 476 5IFE_C Splicing factor 3B subu 70.4 0.38 3.9E-05 55.8 0.0 154 548-715 644-799 (1304)
486 477 6AHD_1 Pre-mRNA-processing-spl 70.4 0.38 3.9E-05 55.8 0.0 154 548-715 644-799 (1304)
487 478 2QK2_A LP04448p; Mini spindles 70.3 0.34 4E-05 41.6 0.0 113 243-358 13-126 (242)
488 479 6MZG_E Tubulin alpha-1A chain, 70.0 0.35 4.1E-05 47.5 0.0 71 549-625 138-211 (554)
489 480 6QH7_A AP-2 complex subunit al 69.9 0.36 4.1E-05 48.9 0.0 100 247-359 76-177 (621)
490 481 1UKL_A Importin beta-1 subunit 69.9 0.35 4.1E-05 50.3 0.0 154 548-714 129-289 (876)
491 482 6EMK_C Serine/threonine-protei 69.9 0.38 4.1E-05 58.8 0.0 136 562-714 1016-1152(2474)
492 483 4XL5_C Green fluorescent prote 69.9 0.36 4.1E-05 42.4 0.0 49 654-714 120-168 (263)
493 484 4D4Z_A DEOXYHYPUSINE HYDROXYLA 69.8 0.36 4.1E-05 42.9 0.0 127 547-715 161-289 (294)
494 485 4D50_A DEOXYHYPUSINE HYDROXYLA 69.8 0.36 4.1E-05 42.9 0.0 127 547-715 161-289 (294)
495 486 6QH5_A AP-2 complex subunit al 69.7 0.37 4.2E-05 48.8 0.0 67 548-623 330-397 (621)
496 487 4XL5_C Green fluorescent prote 69.5 0.37 4.2E-05 42.3 0.0 88 600-714 143-230 (263)
497 488 6LTJ_L Histone H3.2, Histone H 69.2 0.52 4.4E-05 55.1 0.0 106 609-716 1064-1189(1295)
498 489 5WLC_LM rpS18_uS13, rpS4_eS4, 69.1 0.44 4.4E-05 57.4 0.0 153 548-713 1597-1758(1769)
499 490 5YVI_A Transportin-1, RNA-bind 69.1 0.37 4.4E-05 49.7 0.0 155 548-714 131-288 (868)
500 491 3VWA_A Cytoplasmic export prot 68.9 0.42 4.5E-05 49.3 0.0 111 594-715 340-450 (560)
501 492 3VWA_B Cytoplasmic export prot 68.9 0.42 4.5E-05 49.2 0.0 111 594-715 340-450 (560)
502 493 3C5W_A PP2A A subunit, PP2A C; 68.8 0.38 4.5E-05 40.3 0.0 109 245-360 7-115 (232)
503 494 4K92_B CLIP-associating protei 68.6 0.41 4.6E-05 43.1 0.0 109 244-360 129-237 (273)
504 495 6MQ7_B CLIP-associating protei 68.6 0.41 4.6E-05 43.1 0.0 109 244-360 129-237 (273)
505 496 4LAC_A Serine/threonine-protei 68.3 0.41 4.7E-05 41.4 0.0 109 245-360 111-219 (258)
506 497 6MQ5_A CLIP-associating protei 68.0 0.43 4.8E-05 42.3 0.0 108 245-360 49-157 (257)
507 498 2QK1_A Protein STU2; stu2, Stu 67.9 0.42 4.9E-05 40.9 0.0 116 244-360 103-221 (249)
508 499 4D4Z_A DEOXYHYPUSINE HYDROXYLA 67.6 0.43 5E-05 42.3 0.0 60 547-623 74-135 (294)
509 500 4D50_A DEOXYHYPUSINE HYDROXYLA 67.6 0.43 5E-05 42.3 0.0 60 547-623 74-135 (294)
510
511 No 1
512 >1XM9_A plakophilin 1 Plakophilin-1; armadillo repeat, CELL ADHESION; 2.8A {Homo sapiens} SCOP: a.118.1.24
513 Probab=99.69 E-value=6.3e-22 Score=206.93 Aligned_cols=453 Identities=100% Similarity=1.422 Sum_probs=304.9 Template_Neff=12.600
514
515 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
516 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
517 .++.+..++.+.++.++..++.+|..++...+.....+...++++.+..++.+.+..++..++.++.+++.........+
518 T Consensus 3 ~l~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 82 (457)
519 T 1XM9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 82 (457)
520 T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHH
521 T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHhcCCCHHHHHHHHHHHHHHhhCCHHHHHHH
522 Confidence 45566777777778889999999999885444444445555778888888888788899999999999886544333444
523
524
525 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFN 405 (747)
526 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (747)
527 ...+.++.++.++....+..++..++.+|.+++........+..++++.|+.++..+.++|+.+.+.+.....++++...
528 T Consensus 83 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (457)
529 T 1XM9_A 83 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFN 162 (457)
530 T ss_dssp HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHHHHHHHCCCCCCHHHHTCC---------CCCHHHHHH
531 T ss_pred HhcChHHHHHHHhhhCCCHHHHHHHHHHHHHHhCCHHHHHHHHcchHHHHHHHhccccCCCCCCCCCcccccCCHHHHHH
532 Confidence 44567777777775344677888899999999875444333335788999999999999999988887777777777766
533
534
535 Q NP_000290.2 406 ATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYR 485 (747)
536 Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (747)
537 +..+|.. +...+..++.+....|+++.|+.+++.+......+..-.+.+..+|.|++..
538 T Consensus 163 a~~~L~~---------------------l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~l~~~ 221 (457)
539 T 1XM9_A 163 ATGCLRN---------------------LSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYR 221 (457)
540 T ss_dssp HHHHHHH---------------------HTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTT
541 T ss_pred HHHHHHH---------------------HccChHHHHHHHhcccHHHHHHHHHHHhhhcCcCCHHHHHHHHHHHHHHhcc
542 Confidence 6665543 2222223444555567788888887765555556777888999999999999
543
544
545 Q NP_000290.2 486 LDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATL 565 (747)
546 Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr 565 (747)
547 .+.+.+..+..+++.++..+..+...+|+.+...+++....+|.++....+......+.+.++++.++.++....+..++
548 T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 301 (457)
549 T 1XM9_A 222 LDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATL 301 (457)
550 T ss_dssp HHHHSCCHHHHHHHTC----------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHH
551 T ss_pred cccCCCcchhhhhhcccccccccccccccCcccchhccccccCCCCcccCCCchhHHhhchhHHHHHHHHhccCCCHHHH
552 Confidence 99999999999999999999999999999999999999999999998888888888888999999999999733556777
553
554
555 Q NP_000290.2 566 EACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLT 645 (747)
556 Q Consensus 566 ~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~ 645 (747)
557 ..++.+|.+++..............+...++++.|+.++.+.++.++..++.+|.+++..+.....+..++++.++.++.
558 T Consensus 302 ~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~l~~~l~ 381 (457)
559 T 1XM9_A 302 EACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLT 381 (457)
560 T ss_dssp HHHHHHHHHHTTCSSSHHHHHHHCCCCCSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSGGGHHHHHHHTHHHHHHTTT
561 T ss_pred HHHHHHHHHHHhccccccCCcchhhhhhcchHHHHHHHHhcCCHHHHHHHHHHHHHHhcCHHHHHHHHcccHHHHHHHHh
562 Confidence 78999999998753200000002233456788999999988888999999999999996644432233347777777776
563
564
565 Q NP_000290.2 646 SHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKELQG 719 (747)
566 Q Consensus 646 s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~~~~ 719 (747)
567 ........++.++..++.+|.+|+...+.....+.+.++++.|..++....++.++..++.+|.+++.+.+.+.
568 T Consensus 382 ~~~~~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~v~~~a~~~L~~l~~~~~~~~ 455 (457)
569 T 1XM9_A 382 SHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKELQG 455 (457)
570 T ss_dssp SCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSSSTTCSS
571 T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHhccHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhcHhHhc
572 Confidence 52000000567888999999999865566666777778889999988862278899999999999998877654
573
574
575 No 2
576 >3L6X_A Catenin delta-1, E-cadherin; p120, catenin, cadherin, E-cadherin, armadillo; HET: SO4; 2.4A {Homo sapiens}
577 Probab=99.41 E-value=1.1e-17 Score=185.51 Aligned_cols=438 Identities=32% Similarity=0.540 Sum_probs=299.3 Template_Neff=11.000
578
579 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKL 323 (747)
580 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~ 323 (747)
581 ..++.++.++...++.++..++.+|.+++.........+...++++.|+.++.+.+..++..++.+|.+++.. ......
582 T Consensus 48 ~~l~~li~~L~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 127 (584)
583 T 3L6X_A 48 PELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKI 127 (584)
584 T ss_dssp CCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHH
585 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCCcHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCCHHHHH
586 Confidence 4566677777777788899999999998854444444455567888888888887788999999999999864 333444
587
588
589 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMS--REVVDPE 401 (747)
590 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~~~~~~~--~~~~~~~ 401 (747)
591 .+...+.++.++.++....+..++..++.+|.+++........++..++..|+.++..+.++|........ ....+++
592 T Consensus 128 ~~~~~~~i~~L~~ll~~~~~~~v~~~a~~~L~~L~~~~~~~~~l~~~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (584)
593 T 3L6X_A 128 AIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWES 207 (584)
594 T ss_dssp HHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGGGHHHHHHHTHHHCCCCCCHHHHCCC----------CCCCHH
595 T ss_pred HHHcCChHHHHHHHHHHcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhccccCCCCCCCCCcCCCCcccChHH
596 Confidence 44555778888888863346678889999999998765544444445778888888888877754332211 1223455
597
598
599 Q NP_000290.2 402 VFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSAD-AGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
600 Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
601 +..++.++|+. ++..+ ..++.++...|+++.|+..++.++....-+.+.+++|.++|.
602 T Consensus 208 v~~~a~~~L~~---------------------l~~~~~~~~~~l~~~~g~v~~L~~~l~~~~~~~~~~~~~~~~a~~~L~ 266 (584)
603 T 3L6X_A 208 VLTNTAGCLRN---------------------VSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLR 266 (584)
604 T ss_dssp HHHHHHHHHHH---------------------HTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHH
605 T ss_pred HHHHHHHHHHH---------------------HhcCCHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
606 Confidence 66666665543 22222 245556666789999999888765544557788999999999
607
608
609 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
610 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
611 ||++..+.++|...+..+.... ..+ +-...+......+.+.++++.|+.++....
612 T Consensus 267 ~L~~~~~~~~~~~~~~~~~~~~-----------~~~--------------~~~~~~~~~~~~l~~~~~~~~l~~ll~~~~ 321 (584)
613 T 3L6X_A 267 NLSYQVHREIPQAERYQEAAPN-----------VAN--------------NTGTSPARGYELLFQPEVVRIYISLLKESK 321 (584)
614 T ss_dssp HHHTTHHHHSTTCCC---------------------------------------CCCCGGGGGGSHHHHHHHHHHHHHCC
615 T ss_pred HHHhhhhccChhHHHHHHhcCc-----------CCC--------------CCCCCChhhhhHhhChhHHHHHHHHHHcCC
616 Confidence 9999998888765554432110 000 111222233344567889999999998423
617
618
619 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEV 640 (747)
620 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~L 640 (747)
621 ++.++..++.+|.+++......... ....+.+.++++.|+.++.+.++.++..++++|.+|+........+..++++.|
622 T Consensus 322 ~~~~~~~a~~~L~~L~~~~~~~~~~-~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~l~~~~l~~L 400 (584)
623 T 3L6X_A 322 TPAILEASAGAIQNLCAGRWTYGRY-IRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPNL 400 (584)
624 T ss_dssp CHHHHHHHHHHHHHHHSSCSHHHHH-HHHHHTSHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHH
625 T ss_pred CHHHHHHHHHHHHHHhCCCccCCHH-HHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHhcChHHHHHHHcchHHHH
626 Confidence 7788899999999998742100000 233445678899999999988889999999999999877444333334677888
627
628
629 Q NP_000290.2 641 TRLLTSHTGNT--SNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS-ASPKAAEAARLLLSDMWSSKEL 717 (747)
630 Q Consensus 641 l~LL~s~s~~~--~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~-~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
631 +.++....... ..+..++..++.+|.+++...+.....+.+.++++.|+.++... .+..++..|+.+|.+++...+.
632 T Consensus 401 ~~~L~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~~~v~~~a~~~L~~l~~~~~~ 480 (584)
633 T 3L6X_A 401 VKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKEL 480 (584)
634 T ss_dssp HHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHHHTSHHH
635 T ss_pred HHcCCCCCCCCCcCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCHHH
636 Confidence 88776521000 00344577889999998876666777777888899999988653 1478899999999999999999
637
638
639 Q NP_000290.2 718 QGVLRQQGFDRN 729 (747)
640 Q Consensus 718 ~~~~~~~~~~~~ 729 (747)
641 ...+.+.|+-..
642 T Consensus 481 ~~~l~~~g~~~~ 492 (584)
643 T 3L6X_A 481 RKPLEKEGWKKS 492 (584)
644 T ss_dssp HHHHHTTTCCGG
645 T ss_pred HHHHHHcCCchh
646 Confidence 999998888766
647
648
649 No 3
650 >5D5K_C Importin subunit alpha-1, Poly [ADP-ribose]; PARP-2 NLS, PARP-2, poly(ADP-ribose)polymerase-2, Importin; 1.9A {Mus musculus}
651 Probab=98.56 E-value=1.1e-11 Score=126.19 Aligned_cols=369 Identities=14% Similarity=0.172 Sum_probs=230.1 Template_Neff=13.100
652
653 Q NP_000290.2 243 SGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESA-KQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTT 320 (747)
654 Q Consensus 243 ~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~-~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~ 320 (747)
655 ....++.+...+.+.++.++..++.++..+....... ...+...++++.++..+. ..++.++..++.++..++.....
656 T Consensus 11 ~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~ 90 (466)
657 T 5D5K_C 11 VNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSE 90 (466)
658 T ss_dssp CSCCHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHH
659 T ss_pred cCcCHHHHHHHHccCCHHHHHHHHHHHHHHHhcCCCCCHHHHHHcCcHHHHHHHhhCCCChHHHHHHHHHHHHHcCCChH
660 Confidence 4456667777777778888999999998887643221 122333456777777776 34567888899999888764443
661
662
663 Q NP_000290.2 321 NKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVV 398 (747)
664 Q Consensus 321 ~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~ 398 (747)
665 ....+...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.+..++..+. .+..
666 T Consensus 91 ~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----------~~~~ 158 (466)
667 T 5D5K_C 91 QTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPD-----------LSTL 158 (466)
668 T ss_dssp HHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSC-----------GGGS
669 T ss_pred HHHHHhccchHHHHHHHhc-CCCCcHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhhCCC-----------cccc
670 Confidence 3333444457777888876 56778888999999998875432 222333 67777777776421 1112
671
672
673 Q NP_000290.2 399 DPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCV 478 (747)
674 Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (747)
675 ++++...+..++..-. .............+++..+...++. -+..-...+...
676 T Consensus 159 ~~~~~~~a~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~ 211 (466)
677 T 5D5K_C 159 ACGYLRNLTWTLSNLC---------------------RNKNPAPPLDAVEQILPTLVRLLHH------NDPEVLADSCWA 211 (466)
678 T ss_dssp CHHHHHHHHHHHHHHS---------------------CCCSSCCCHHHHHHHHHHHHHHTTS------SCHHHHHHHHHH
679 T ss_pred cHHHHHHHHHHHHHHH---------------------cCCCCCCChHHHHHHHHHHHHHHcC------CCHHHHHHHHHH
680 Confidence 3334444433332211 1011111111123444444443321 112222223333
681
682
683 Q NP_000290.2 479 LHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK 558 (747)
684 Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s 558 (747)
685 |.++...- ......+.+.++++.++.++.
686 T Consensus 212 l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~- 240 (466)
687 T 5D5K_C 212 ISYLTDGP--------------------------------------------------NERIEMVVKKGVVPQLVKLLG- 240 (466)
688 T ss_dssp HHHHTSSC--------------------------------------------------HHHHHHHHTTTCHHHHHHHHT-
689 T ss_pred HHHHhcCC--------------------------------------------------chHHHHHHHCChHHHHHHHhc-
690 Confidence 33332110 001111234567888888887
691
692
693 Q NP_000290.2 559 SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQV 636 (747)
694 Q Consensus 559 s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~gi 636 (747)
695 +.++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. +.. ..+...++
696 T Consensus 241 ~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~ 315 (466)
697 T 5D5K_C 241 ATELPIVTPALRAIGNIVTGTDE-----QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGL 315 (466)
698 T ss_dssp CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTC
699 T ss_pred CCCchHHHHHHHHHHHHhcCCHH-----HHHHHHccChhHhHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCH
700 Confidence 46778888999999999875332 233334567888999999888889999999999999876 322 23344567
701
702
703 Q NP_000290.2 637 FPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
704 Q Consensus 637 I~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
705 ++.+..++.+ .++.++..++.+|.+++.. .......+.+.++++.+..++.+. ++.++..++.+|.+++.
706 T Consensus 316 ~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~ 386 (466)
707 T 5D5K_C 316 VPFLVGVLSK------ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK-DTKIIQVILDAISNIFQ 386 (466)
708 T ss_dssp HHHHHHHHHS------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCS-CHHHHHHHHHHHHHHHH
709 T ss_pred HHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCcHHHHHHHhhcC-CHHHHHHHHHHHHHHHH
710 Confidence 8888888876 3678889999999999874 233344455556788888888866 78899999999999987
711
712
713 No 4
714 >3NMZ_A APC variant protein, Rho guanine; protein-protein complex, armadillo repeats, CELL; 3.01A {Homo sapiens}
715 Probab=98.55 E-value=1.3e-11 Score=128.97 Aligned_cols=381 Identities=18% Similarity=0.200 Sum_probs=233.7 Template_Neff=12.000
716
717 Q NP_000290.2 238 EDIECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQN------------VQQ 305 (747)
718 Q Consensus 238 ~~~~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~e------------Vr~ 305 (747)
719 .+..+...+++.++.++...+... ++.+|..++.. ......+...+.++.+..++...+.. ++.
720 T Consensus 25 ~~~~~~~~~i~~l~~~l~~~~~~~---a~~~L~~l~~~-~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~~~~v~~ 100 (458)
721 T 3NMZ_A 25 SHLGTKVEMVYSLLSMLGTHDKDD---MSRTLLAMSSS-QDSCISMRQSGCLPLLIQLLHGNDKDSVLLGNSRGSKEARA 100 (458)
722 T ss_pred HHhHhccchHHHHHHHhCCCCHHH---HHHHHHHHhCC-chHHHHHHHcCcHHHHHHHhcCCChhhcCCCCcccCHHHHH
723 Confidence 344445556677777776554443 77778777643 23333444556778888888765555 888
724
725
726 Q NP_000290.2 306 AAAGALRNLVFRST---TNKLETRRQNGIREAVSLLR--------------------RTGNAEIQKQLTGLLWNLSSTDE 362 (747)
727 Q Consensus 306 ~AL~aLs~La~~~~---~~~~~ll~~~IL~~Ll~lL~--------------------ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
728 .++.+|.+++...+ .....+...+.++.+...+. ...+..++..++.++.+++....
729 T Consensus 101 ~a~~~L~~l~~~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~L~~l~~~~~ 180 (458)
730 T 3NMZ_A 101 RASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFDEE 180 (458)
731 T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHCCcHHHHHHHHHhhhhcccchhhHHHHHHhcCCCChHHHHHHHHHHHHHHcCChH
732 Confidence 99999999885432 22222222334444444421 01234455667778887776554
733
734
735 Q NP_000290.2 363 LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSA-DAG 440 (747)
736 Q Consensus 363 ~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 440 (747)
737 ....+.. ++++.|+.++....... .... ...++++...+..+|.. +... +..
738 T Consensus 181 ~~~~~~~~~~~~~l~~~l~~~~~~~----~~~~-~~~~~~~~~~a~~~L~~---------------------l~~~~~~~ 234 (458)
739 T 3NMZ_A 181 HRHAMNELGGLQAIAELLQVDCEMY----GLTN-DHYSITLRRYAGMALTN---------------------LTFGDVAN 234 (458)
740 T ss_pred HHHHHHHCChHHHHHHHHhccccCC----CCCC-CCCCHHHHHHHHHHHHH---------------------HHcCCHHH
741 Confidence 4444444 77888888877532211 1110 11244554444444432 1111 111
742
743
744 Q NP_000290.2 441 RQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDK 520 (747)
745 Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (747)
746 ++.+....|+++.|...++. .+..-.+.+..+|.|++..-+.
747 T Consensus 235 ~~~~~~~~~~i~~l~~~l~~------~~~~~~~~a~~~L~~l~~~~~~-------------------------------- 276 (458)
748 T 3NMZ_A 235 KATLCSMKGCMRALVAQLKS------ESEDLQQVIASVLRNLSWRADV-------------------------------- 276 (458)
749 T ss_pred HHHHHHhCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHHCCCCh--------------------------------
750 Confidence 22233445667777666542 2334445555566665431100
751
752
753 Q NP_000290.2 521 MMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK-EKGLPQ 599 (747)
754 Q Consensus 521 ~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie-~giI~~ 599 (747)
755 .....+.+.++++.|+.++....+..++..++++|.+++...+. ....+.. .++++.
756 T Consensus 277 -----------------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~~ 334 (458)
757 T 3NMZ_A 277 -----------------NSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTE-----NKADICAVDGALAF 334 (458)
758 T ss_pred -----------------hHHHHHHHCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCch-----hHHHHHHhcChHHH
759 Confidence 01122356678888888887325667888999999999874332 2233344 778888
760
761
762 Q NP_000290.2 600 IARLLQS----GNSDVVRSGASLLSNMSR---H-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
763 Q Consensus 600 Ll~LL~s----~d~eVr~~AL~aLsnLa~---~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
764 |+.++.. .+..++..++.+|.+++. . ... ..+...++++.|+.++.. .++.++..++++|.+++.
765 T Consensus 335 l~~~l~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~l~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l~~ 408 (458)
766 T 3NMZ_A 335 LVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKS------HSLTIVSNACGTLWNLSA 408 (458)
767 T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhCC------CCHHHHHHHHHHHHHHHC
768 Confidence 8888872 346778889999988863 2 222 233456788888888876 367889999999999998
769
770
771 Q NP_000290.2 671 SQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
772 Q Consensus 671 ~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
773 ..+.....+.+.++++.|..++.+. ++.++..++.+|.+++...
774 T Consensus 409 ~~~~~~~~l~~~~~~~~L~~ll~~~-~~~v~~~a~~~L~~l~~~~ 452 (458)
775 T 3NMZ_A 409 RNPKDQEALWDMGAVSMLKNLIHSK-HKMIAMGSAAALRNLMANR 452 (458)
776 T ss_pred CCHHHHHHHHHCCcHHHHHHHHhCC-CHHHHHHHHHHHHHHHcCC
777 Confidence 5566677777778899999988876 6778999999999998654
778
779
780 No 5
781 >4UAF_B Importin alpha 1 import receptor; importin karyopherin complex NLS, PROTEIN; HET: PO4; 1.698A {Mus musculus}
782 Probab=98.54 E-value=1.3e-11 Score=125.71 Aligned_cols=369 Identities=14% Similarity=0.172 Sum_probs=229.2 Template_Neff=13.100
783
784 Q NP_000290.2 243 SGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESA-KQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTT 320 (747)
785 Q Consensus 243 ~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~-~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~ 320 (747)
786 ....++.+...+.+.++.++..++.++..+....... ...+...++++.++..+. ..++.++..++.++..++.....
787 T Consensus 11 ~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~ 90 (466)
788 T 4UAF_B 11 VNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSE 90 (466)
789 T ss_pred cCcCHHHHHHHHccCCHHHHHHHHHHHHHHHhcCCCCCHHHHHHcCcHHHHHHHhhCCCChHHHHHHHHHHHHHhcCChH
790 Confidence 4456667777777778888999999998887643221 122333456777777776 34567888899999888764443
791
792
793 Q NP_000290.2 321 NKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVV 398 (747)
794 Q Consensus 321 ~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~ 398 (747)
795 ....+...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.+..++..+. .+..
796 T Consensus 91 ~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-----------~~~~ 158 (466)
797 T 4UAF_B 91 QTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPD-----------LSTL 158 (466)
798 T ss_pred HHHHHHccChHHHHHHHhc-CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhhCCC-----------cccc
799 Confidence 3333444457777888876 56778888999999998875432 222233 67777777775421 1112
800
801
802 Q NP_000290.2 399 DPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCV 478 (747)
803 Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (747)
804 ++++...+..++..-. .............+++..+...+.. -+..-...+...
805 T Consensus 159 ~~~~~~~~~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~ 211 (466)
806 T 4UAF_B 159 ACGYLRNLTWTLSNLC---------------------RNKNPAPPLDAVEQILPTLVRLLHH------NDPEVLADSCWA 211 (466)
807 T ss_pred cHHHHHHHHHHHHHHH---------------------cCCCCCCChhHHHHHHHHHHHHHcC------CCHHHHHHHHHH
808 Confidence 3334333333332211 0001111111113344444433321 111222222333
809
810
811 Q NP_000290.2 479 LHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK 558 (747)
812 Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s 558 (747)
813 |.++...- ......+.+.++++.++.++.
814 T Consensus 212 l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~- 240 (466)
815 T 4UAF_B 212 ISYLTDGP--------------------------------------------------NERIEMVVKKGVVPQLVKLLG- 240 (466)
816 T ss_pred HHHHhcCC--------------------------------------------------cHHHHHHHHCChHHHHHHHhc-
817 Confidence 33332110 001112245567888888887
818
819
820 Q NP_000290.2 559 SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQV 636 (747)
821 Q Consensus 559 s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~gi 636 (747)
822 +.++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. +.. ..+...++
823 T Consensus 241 ~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~ 315 (466)
824 T 4UAF_B 241 ATELPIVTPALRAIGNIVTGTDE-----QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGL 315 (466)
825 T ss_pred CCChhHHHHHHHHHHHHhcCCHH-----HHHHHhccCHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCH
826 Confidence 46778888999999999875332 233334567888899999888889999999999999876 322 23344567
827
828
829 Q NP_000290.2 637 FPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
830 Q Consensus 637 I~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
831 ++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|.+++.
832 T Consensus 316 ~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~ 386 (466)
833 T 4UAF_B 316 VPFLVGVLSK------ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK-DTKIIQVILDAISNIFQ 386 (466)
834 T ss_pred HHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCcHHHHHHHhhcC-CHHHHHHHHHHHHHHHH
835 Confidence 8888888876 3678889999999999874 233344455556788888888876 78899999999999987
836
837
838 No 6
839 >4U5L_A deltaIBB-importin-alpha1; TPX2, inhibitor, TRANSPORT PROTEIN; HET: 3D6; 2.53A {Mus musculus}
840 Probab=98.52 E-value=1.7e-11 Score=122.96 Aligned_cols=360 Identities=16% Similarity=0.184 Sum_probs=217.1 Template_Neff=13.200
841
842 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
843 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
844 +++.+...+. ..++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++.........
845 T Consensus 49 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 128 (426)
846 T 4U5L_A 49 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 128 (426)
847 T ss_dssp CHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHH
848 T ss_pred cHHHHHHHhccCCChHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHhcCCChHHHHHHHHHHHHHhcCCHHHHHH
849 Confidence 4555666665 445678888899998887654433334444567778888888778888999999999988654433333
850
851
852 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAE-----IQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
853 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~e-----Vr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
854 +...++++.+...+. ..... ++..++.++..++.......... .++++.+..++..
855 T Consensus 129 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 191 (426)
856 T 4U5L_A 129 VIKHGAIDPLLALLA-VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH---------------- 191 (426)
857 T ss_dssp HHHTTCHHHHHHTTC-SSCGGGSCHHHHHHHHHHHHHHTCCCSSCCCHHHHHHHHHHHHHHTTS----------------
858 T ss_pred HHHCCcHHHHHHHhh-CCCCchhhHHHHHHHHHHHHHHHcCCCCCCCccHHHHHHHHHHHHHhC----------------
859 Confidence 334456677777765 32222 67778888888776433222221 2555666665542
860
861
862 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
863 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
864 .|+++...+..++..-.... + .....+. -.+++..|...+.. .+..-...+..
865 T Consensus 192 ~~~~~~~~a~~~l~~l~~~~------~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~a~~ 244 (426)
866 T 4U5L_A 192 NDPEVLADSCWAISYLTDGP------N--------------ERIEMVV-KKGVVPQLVKLLGA------TELPIVTPALR 244 (426)
867 T ss_dssp SCHHHHHHHHHHHHHHTSSC------H--------------HHHHHHH-TTTCHHHHHHHHTC------SCHHHHHHHHH
868 T ss_pred CCHHHHHHHHHHHHHHhhCC------c--------------HHHHHHh-hcChHHHHHHHhcC------CCccHHHHHHH
869 Confidence 13444444444443211100 0 0000000 12233333333221 11122222333
870
871
872 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
873 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
874 .|.++...- ......+.+.++++.+..++.
875 T Consensus 245 ~l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 274 (426)
876 T 4U5L_A 245 AIGNIVTGT--------------------------------------------------DEQTQKVIDAGALAVFPSLLT 274 (426)
877 T ss_dssp HHHHHTTSC--------------------------------------------------HHHHHHHHHTTGGGGHHHHTT
878 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHhccchHHHHHHHhc
879 Confidence 333332100 001112245567888888887
880
881
882 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGN 634 (747)
883 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~ 634 (747)
884 +.++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...
885 T Consensus 275 -~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~ 348 (426)
886 T 4U5L_A 275 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC 348 (426)
887 T ss_dssp -CSSHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHT
888 T ss_pred -CCChHHHHHHHHHHHHHhcCCHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhC
889 Confidence 46778888999999999875332 233334557888899998888888999999999999875 2 22 233445
890
891
892 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS------QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
893 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~------s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
894 ++++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.++
895 T Consensus 349 ~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~-~~~v~~~a~~~l 421 (426)
896 T 4U5L_A 349 GIIEPLMNLLSA------KDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE-NESVYKASLNLI 421 (426)
897 T ss_dssp TCHHHHHHGGGS------CCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHGGGGSS-CHHHHHHHHHHH
898 T ss_pred CcHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHHHH
899 Confidence 678888888876 3678899999999999763 123333444556788888888776 788898888888
900
901
902 Q NP_000290.2 709 SDMW 712 (747)
903 Q Consensus 709 snL~ 712 (747)
904 .++.
905 T Consensus 422 ~~~~ 425 (426)
906 T 4U5L_A 422 EKYF 425 (426)
907 T ss_dssp HHHC
908 T ss_pred HHHc
909 Confidence 7764
910
911
912 No 7
913 >6SA7_B DARPin-Armadillo fusion C8long83; protein fusion, DARPin, Armadillo, shared; 3.3A {synthetic construct}
914 Probab=98.48 E-value=2.5e-11 Score=127.02 Aligned_cols=136 Identities=24% Similarity=0.253 Sum_probs=93.8 Template_Neff=12.500
915
916 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
917 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
918 ..+++.+...+.+.++.++..++.+|..++.........+...++++.+...+.+.++.++..++.++..++........
919 T Consensus 172 ~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~ 251 (510)
920 T 6SA7_B 172 KKILKDLVKKLSSPNENELQNALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 251 (510)
921 T ss_dssp HHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHH
922 T ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCChHHHHHHHHcCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHH
923 Confidence 45666777777777788889999999998765544444444556788888888887888999999999998765443333
924
925
926 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
927 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
928 .+...++++.+...+. +.++.++..++.++..++..... ...+.. ++++.|+.++.
929 T Consensus 252 ~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 309 (510)
930 T 6SA7_B 252 AVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 309 (510)
931 T ss_dssp HHHHTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT
932 T ss_pred HHHHcCcHHHHHHHcc-CCCHHHHHHHHHHHHHHhcCChHHHHHHHHcChHHHHHHHhc
933 Confidence 3444567777777775 55677888888888888754322 222222 56666666664
934
935
936 No 8
937 >4RV1_D Engineered Protein OR497; STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE; 2.573A {SYNTHETIC CONSTRUCT}
938 Probab=98.47 E-value=2.7e-11 Score=120.80 Aligned_cols=362 Identities=20% Similarity=0.254 Sum_probs=220.3 Template_Neff=13.300
939
940 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
941 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
942 ++.+...+.+.++.++..++.++..+..............++++.+...+.+.++.++..++.++..++...........
943 T Consensus 4 ~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~ 83 (420)
944 T 4RV1_D 4 VEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIV 83 (420)
945 T ss_dssp HHHHHHHHHCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHTTSCSCSSSHHHHHHHHHHHTTSCHHHHHHHH
946 T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhcCcHHHHHHHHHCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
947 Confidence 44556666677788888999999888765433333333446677777888777788899999999888765433323333
948
949
950 Q NP_000290.2 327 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
951 Q Consensus 327 ~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
952 ..++++.+...+. +.++.++..++.++..+..... ....+.. ++++.+..++.. .++++..
953 T Consensus 84 ~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~~~ 146 (420)
954 T 4RV1_D 84 DAGGVEVLVKLLT-STDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTS----------------TDSEVQK 146 (420)
955 T ss_dssp HTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC----------------SCHHHHH
956 T ss_pred HcChHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCChHHHHHHHHcCHHHHHHHHHhC----------------CCHHHHH
957 Confidence 3456677777776 5567788889999988876432 2222222 566666666542 1344444
958
959
960 Q NP_000290.2 405 NATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSY 484 (747)
961 Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (747)
962 .+..++..-.... + .....+. ..+++..+...++. .+..-...+..+|.++..
963 T Consensus 147 ~a~~~l~~l~~~~------~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~ 199 (420)
964 T 4RV1_D 147 EAARALANIASGP------D--------------EAIKAIV-DAGGVEVLVKLLTS------TDSEVQKEAARALANIAS 199 (420)
965 T ss_dssp HHHHHHHHHHTSC------H--------------HHHHHHH-HTTHHHHHHHHTTC------SSHHHHHHHHHHHHHHHT
966 T ss_pred HHHHHHHHHhcCC------H--------------HHHHHHH-HCCHHHHHHHHhcC------CCHHHHHHHHHHHHHHhC
967 Confidence 4443332211000 0 0000000 01333333333221 111111222222222211
968
969
970 Q NP_000290.2 485 RLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDAT 564 (747)
971 Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eV 564 (747)
972 .. ......+.+.++++.+...+. +.++.+
973 T Consensus 200 ~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~~~ 228 (420)
974 T 4RV1_D 200 GP--------------------------------------------------TSAIKAIVDAGGVEVLVKLLT-STDSEV 228 (420)
975 T ss_dssp SC--------------------------------------------------HHHHHHHHTTTHHHHHHHHTT-CSCHHH
976 T ss_pred CC--------------------------------------------------HHHHHHHHHCCHHHHHHHHhh-CCCHHH
977 Confidence 00 000111234456777888887 467788
978
979
980 Q NP_000290.2 565 LEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL-L-HRVMGNQVFPEVTR 642 (747)
981 Q Consensus 565 r~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e-~-~~ll~~giI~~Ll~ 642 (747)
982 +..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.... . ..+...++++.+..
983 T Consensus 229 ~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ 303 (420)
984 T 4RV1_D 229 QKEAARALANIASGPDE-----AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVK 303 (420)
985 T ss_dssp HHHHHHHHHHHHTSCHH-----HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHH
986 T ss_pred HHHHHHHHHHHhCCCHH-----HHHHHhhccHHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHH
987 Confidence 88999999998864332 12233456788888888888888899999999999987632 2 23344467777888
988
989
990 Q NP_000290.2 643 LLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
991 Q Consensus 643 LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
992 ++.+ .++.++..++.+|.+++...+.....+...+.++.+..++.+. ++.++..++.+|.+++...
993 T Consensus 304 ~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~a~~~l~~l~~~~ 369 (420)
994 T 4RV1_D 304 LLTS------TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST-DSEVQKEAARALANIASGP 369 (420)
995 T ss_dssp HTTC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHHTSC
996 T ss_pred HccC------CCHHHHHHHHHHHHHHHcChHHHHHHHHHCCHHHHHHHHhCCC-CHHHHHHHHHHHHHHHcCC
997 Confidence 7776 3678899999999999876444444455556788888888766 7889999999999998764
998
999
1000 No 9
1001 >6S9O_F designed Armadillo repeat protein with; peptide binder, repeat protein, designed; HET: CA, EDO; 3.17A {synthetic construct}
1002 Probab=98.47 E-value=2.8e-11 Score=117.85 Aligned_cols=167 Identities=20% Similarity=0.267 Sum_probs=122.0 Template_Neff=13.100
1003
1004 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
1005 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
1006 ..++++.++.++. +.++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.
1007 T Consensus 170 ~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~ 243 (344)
1008 T 6S9O_F 170 DAGALPALVQLLS-SPNEQILQLALWALSNIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIAS 243 (344)
1009 T ss_dssp HTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
1010 T ss_pred hCCcHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCChH-----HHHHHHhcChHHHHHHHccCCCHHHHHHHHHHHHHHHc
1011 Confidence 4456777888887 46777888899999998864332 12333445788888888888888899999999999986
1012
1013
1014 Q NP_000290.2 625 H-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
1015 Q Consensus 625 ~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
1016 . ... ......++++.+..++.+ .++.++..++.+|.+++...+.....+.+.++++.+..++.+. ++.++.
1017 T Consensus 244 ~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~ 316 (344)
1018 T 6S9O_F 244 GGNEQIQAVIDAGALPALVQLLSS------PNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHE-NEKIQK 316 (344)
1019 T ss_dssp SCHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS-CHHHHH
1020 T ss_pred CcHHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHhhCC-CHHHHH
1021 Confidence 5 222 233445677778887766 3678889999999999876555555555556788888888766 788999
1022
1023
1024 Q NP_000290.2 703 AARLLLSDMWSSKELQGVLRQQ 724 (747)
1025 Q Consensus 703 aAL~aLsnL~~~~~~~~~~~~~ 724 (747)
1026 .++.+|.+++...+.....+..
1027 T Consensus 317 ~a~~~l~~l~~~~~~~~~~~~~ 338 (344)
1028 T 6S9O_F 317 EAQEALEKLQSHGSGGSGKRKR 338 (344)
1029 T ss_dssp HHHHHHHHHHHCSCCCCCCCBC
1030 T ss_pred HHHHHHHHHHhcccCCCchhcc
1031 Confidence 9999999998776654444333
1032
1033
1034 No 10
1035 >5MFD_C YIIIM''6AII, Capsid decoration protein,pD_(KR)5; Designed armadillo repeat protein, peptide; HET: CA; 2.3A {synthetic construct}
1036 Probab=98.46 E-value=3e-11 Score=116.21 Aligned_cols=318 Identities=20% Similarity=0.263 Sum_probs=178.1 Template_Neff=13.300
1037
1038 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
1039 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
1040 +++.+...+.+.++.++..++.++..+....+.....+...++++.+...+.+.++.++..++.++..+..........+
1041 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 84 (328)
1042 T 5MFD_C 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 84 (328)
1043 T ss_dssp CHHHHHHHHHSSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
1044 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCcHHHHHHH
1045 Confidence 45556666666777888889999988876544333334445677788888877778888889998888875433322223
1046
1047
1048 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
1049 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
1050 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.. .++++.
1051 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~~ 147 (328)
1052 T 5MFD_C 85 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSS----------------PNEQIL 147 (328)
1053 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGC----------------SCHHHH
1054 T ss_pred hhcCHHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHhcC----------------CCHHHH
1055 Confidence 33345666666665 4455666777777777665321 1111111 334444433321 011111
1056
1057
1058 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
1059 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
1060 .. ++..|.++.
1061 T Consensus 148 ~~---------------------------------------------------------------------a~~~l~~l~ 158 (328)
1062 T 5MFD_C 148 QE---------------------------------------------------------------------ALWTLGNIA 158 (328)
1063 T ss_dssp HH---------------------------------------------------------------------HHHHHHHHT
1064 T ss_pred HH---------------------------------------------------------------------HHHHHHHHH
1065 Confidence 11 111222221
1066
1067
1068 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
1069 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
1070 ...+ .....+.+.++++.++.++. +.++.
1071 T Consensus 159 ~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~~~~ 187 (328)
1072 T 5MFD_C 159 SGGN--------------------------------------------------EQIQAVIDAGALPALVQLLS-SPNEQ 187 (328)
1073 T ss_dssp TSCH--------------------------------------------------HHHHHHHHTTHHHHHHHGGG-CSCHH
1074 T ss_pred cCCH--------------------------------------------------HHHHHHHHCCcHHHHHHHhc-CCCHH
1075 Confidence 0000 00000122345556666665 35556
1076
1077
1078 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEVT 641 (747)
1079 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~Ll 641 (747)
1080 ++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.++.+++.. +.. ......++++.+.
1081 T Consensus 188 ~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~ 262 (328)
1082 T 5MFD_C 188 ILQEALWTLGNIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALV 262 (328)
1083 T ss_dssp HHHHHHHHHHHHHTSCHH-----HHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHH
1084 T ss_pred HHHHHHHHHHHHHcCCHH-----HHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHH
1085 Confidence 666777777777654221 122223445667777777666667777777777777654 222 2223345666666
1086
1087
1088 Q NP_000290.2 642 RLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
1089 Q Consensus 642 ~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
1090 .++.+ .++.++..++.+|.+++...+.....+.+.++++.+..++.+. ++.++..++.+|.+++
1091 T Consensus 263 ~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~ 326 (328)
1092 T 5MFD_C 263 QLLSS------PNEQILQEALWTLGNIASGGNEQKQAVKEAGALEKLEQLQSHE-NEKIQKEAQEALEKLQ 326 (328)
1093 T ss_dssp HGGGC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHH
1094 T ss_pred HHhcC------CCHHHHHHHHHHHHHHhCCcHHHHHHHHHCCHHHHHHHHhhCC-CHHHHHHHHHHHHHHh
1095 Confidence 66655 2566777777777777765444444444445667777777655 6677777777777665
1096
1097
1098 No 11
1099 >4MZ6_E Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial, Importin; ARM repeat, protein transport, Importin; 1.88A {Mus musculus}
1100 Probab=98.45 E-value=3.5e-11 Score=125.01 Aligned_cols=368 Identities=14% Similarity=0.178 Sum_probs=227.8 Template_Neff=12.800
1101
1102 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAK-QQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTN 321 (747)
1103 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~-~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~~~ 321 (747)
1104 ..+++.+...+.+.++.++..++.++..+........ ..+...++++.+...+...+ +.++..++.++..++......
1105 T Consensus 56 ~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~ 135 (509)
1106 T 4MZ6_E 56 NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQ 135 (509)
1107 T ss_dssp TCCHHHHHHHHTTCCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHH
1108 T ss_pred hhhHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCCHHHHHHCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhCCCHHH
1109 Confidence 4456667777777788889999999988876433211 22333456777777776543 678888999998887654433
1110
1111
1112 Q NP_000290.2 322 KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVD 399 (747)
1113 Q Consensus 322 ~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~ 399 (747)
1114 ...+...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.|+.++..... +..+
1115 T Consensus 136 ~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----------~~~~ 203 (509)
1116 T 4MZ6_E 136 TKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDL-----------STLA 203 (509)
1117 T ss_dssp HHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCG-----------GGSC
1118 T ss_pred HHHHHhcChHHHHHHHhc-CCChhHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhCCCh-----------hhhh
1119 Confidence 333444467777888886 56778889999999998875432 222223 677777777764211 1122
1120
1121
1122 Q NP_000290.2 400 PEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVL 479 (747)
1123 Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (747)
1124 +++...+..+|..-. .............+++..+...+.. -+......+...|
1125 T Consensus 204 ~~~~~~~~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l 256 (509)
1126 T 4MZ6_E 204 CGYLRNLTWTLSNLC---------------------RNKNPAPPLDAVEQILPTLVRLLHH------NDPEVLADSCWAI 256 (509)
1127 T ss_dssp HHHHHHHHHHHHHHH---------------------CCCSSCCCHHHHHHHHHHHHHHTTC------SCHHHHHHHHHHH
1128 T ss_pred HHHHHHHHHHHHHHh---------------------cCCCCCCCHHHHHHHHHHHHHHHhC------CCHHHHHHHHHHH
1129 Confidence 333333333332211 0000011111112334444333321 1111222222223
1130
1131
1132 Q NP_000290.2 480 HNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKS 559 (747)
1133 Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss 559 (747)
1134 .++...- ......+.+.++++.|+.++. +
1135 T Consensus 257 ~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~ 285 (509)
1136 T 4MZ6_E 257 SYLTDGP--------------------------------------------------NERIEMVVKKGVVPQLVKLLG-A 285 (509)
1137 T ss_dssp HHHTSSS--------------------------------------------------HHHHHHHHTTTCHHHHHHHHT-C
1138 T ss_pred HHHhcCC--------------------------------------------------hHHHHHHhhCChHHHHHHHhc-C
1139 Confidence 3222100 001112244567888888887 4
1140
1141
1142 Q NP_000290.2 560 KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVF 637 (747)
1143 Q Consensus 560 ~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI 637 (747)
1144 .++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. +.. ..+...+++
1145 T Consensus 286 ~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~ 360 (509)
1146 T 4MZ6_E 286 TELPIVTPALRAIGNIVTGTDE-----QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLV 360 (509)
1147 T ss_dssp SCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHH
1148 T ss_pred CCcchHHHHHHHHHHHhcCCHH-----HHHHHHhCChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHH
1149 Confidence 6778888999999999875332 233334567888899999888889999999999999876 322 233445678
1150
1151
1152 Q NP_000290.2 638 PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
1153 Q Consensus 638 ~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
1154 +.++.++.+ .++.++..++.+|.+++.. .+.....+.+.++++.|..++.+. ++.++..++.+|.+++.
1155 T Consensus 361 ~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~ 430 (509)
1156 T 4MZ6_E 361 PFLVGVLSK------ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK-DTKIIQVILDAISNIFQ 430 (509)
1157 T ss_dssp HHHHHHHHS------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCS-CHHHHHHHHHHHHHHHH
1158 T ss_pred HHHHHHhcC------CCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCCHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
1159 Confidence 888888876 3678899999999999874 234444555556788888888876 78899999999999987
1160
1161
1162 No 12
1163 >5UMZ_B Importin subunit alpha-1, TNRC6A; mRNA decay, miRNA ARM repeat; HET: GOL; 1.9A {Mus musculus}
1164 Probab=98.45 E-value=3.5e-11 Score=125.01 Aligned_cols=368 Identities=14% Similarity=0.178 Sum_probs=227.8 Template_Neff=12.800
1165
1166 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAK-QQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTN 321 (747)
1167 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~-~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~~~ 321 (747)
1168 ..+++.+...+.+.++.++..++.++..+........ ..+...++++.+...+...+ +.++..++.++..++......
1169 T Consensus 56 ~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~ 135 (509)
1170 T 5UMZ_B 56 NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQ 135 (509)
1171 T ss_dssp SCCHHHHHHHHTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHH
1172 T ss_pred hhhHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCCCHHHHHHCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhCCCHHH
1173 Confidence 4456667777777788889999999988876433211 22333456777777776543 678888999998887654433
1174
1175
1176 Q NP_000290.2 322 KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVD 399 (747)
1177 Q Consensus 322 ~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~ 399 (747)
1178 ...+...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.|+.++..... +..+
1179 T Consensus 136 ~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----------~~~~ 203 (509)
1180 T 5UMZ_B 136 TKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDL-----------STLA 203 (509)
1181 T ss_dssp HHHHHHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHHTCSSCG-----------GGSC
1182 T ss_pred HHHHHhcChHHHHHHHhc-CCChhHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhCCCh-----------hhhh
1183 Confidence 333444467777888886 56778889999999998875432 222223 677777777764211 1122
1184
1185
1186 Q NP_000290.2 400 PEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVL 479 (747)
1187 Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (747)
1188 +++...+..+|..-. .............+++..+...+.. -+......+...|
1189 T Consensus 204 ~~~~~~~~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l 256 (509)
1190 T 5UMZ_B 204 CGYLRNLTWTLSNLC---------------------RNKNPAPPLDAVEQILPTLVRLLHH------NDPEVLADSCWAI 256 (509)
1191 T ss_dssp HHHHHHHHHHHHHHH---------------------CCCSSCCCHHHHHHHHHHHHHHTTS------SCHHHHHHHHHHH
1192 T ss_pred HHHHHHHHHHHHHHh---------------------cCCCCCCCHHHHHHHHHHHHHHHhC------CCHHHHHHHHHHH
1193 Confidence 333333333332211 0000011111112334444333321 1111222222223
1194
1195
1196 Q NP_000290.2 480 HNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKS 559 (747)
1197 Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss 559 (747)
1198 .++...- ......+.+.++++.|+.++. +
1199 T Consensus 257 ~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~ 285 (509)
1200 T 5UMZ_B 257 SYLTDGP--------------------------------------------------NERIEMVVKKGVVPQLVKLLG-A 285 (509)
1201 T ss_dssp HHHTSSC--------------------------------------------------HHHHHHHHTTTCHHHHHHHHT-C
1202 T ss_pred HHHhcCC--------------------------------------------------hHHHHHHhhCChHHHHHHHhc-C
1203 Confidence 3222100 001112244567888888887 4
1204
1205
1206 Q NP_000290.2 560 KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVF 637 (747)
1207 Q Consensus 560 ~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI 637 (747)
1208 .++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. +.. ..+...+++
1209 T Consensus 286 ~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~ 360 (509)
1210 T 5UMZ_B 286 TELPIVTPALRAIGNIVTGTDE-----QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLV 360 (509)
1211 T ss_dssp SCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHH
1212 T ss_pred CCcchHHHHHHHHHHHhcCCHH-----HHHHHHhCChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHH
1213 Confidence 6778888999999999875332 233334567888899999888889999999999999876 322 233445678
1214
1215
1216 Q NP_000290.2 638 PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
1217 Q Consensus 638 ~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
1218 +.++.++.+ .++.++..++.+|.+++.. .+.....+.+.++++.|..++.+. ++.++..++.+|.+++.
1219 T Consensus 361 ~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~ 430 (509)
1220 T 5UMZ_B 361 PFLVGVLSK------ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK-DTKIIQVILDAISNIFQ 430 (509)
1221 T ss_dssp HHHHHHHHS------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCS-CHHHHHHHHHHHHHHHH
1222 T ss_pred HHHHHHhcC------CCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCCHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
1223 Confidence 888888876 3678899999999999874 234444555556788888888876 78899999999999987
1224
1225
1226 No 13
1227 >2JDQ_A IMPORTIN ALPHA-1 SUBUNIT, POLYMERASE BASIC; TRANSPORT, PB2 SUBUNIT, NUCLEAR PROTEIN; 2.2A {HOMO SAPIENS}
1228 Probab=98.45 E-value=3.6e-11 Score=122.13 Aligned_cols=367 Identities=14% Similarity=0.163 Sum_probs=226.8 Template_Neff=13.000
1229
1230 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESA--KQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTT 320 (747)
1231 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~--~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~ 320 (747)
1232 +.+++.+...+.+.++.++..++.+|..+....... ...+...++++.+...+.. .++.++..++.++..++.....
1233 T Consensus 19 ~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~ 98 (450)
1234 T 2JDQ_A 19 GVITSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSL 98 (450)
1235 T ss_dssp ---CHHHHHHHHSSCHHHHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHH
1236 T ss_pred CcccHHHHHHHhcCCHHHHHHHHHHHHHHHccCCCCCHhHHhcCcchHHHHHHHHccCCCHHHHHHHHHHHHHHhCCCcH
1237 Confidence 445567777788788889999999999887532211 1222224667777777765 5677888899999888765443
1238
1239
1240 Q NP_000290.2 321 NKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVV 398 (747)
1241 Q Consensus 321 ~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~ 398 (747)
1242 ....+...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.++.++... .
1243 T Consensus 99 ~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~ 162 (450)
1244 T 2JDQ_A 99 QTRIVIQAGAVPIFIELLS-SEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQ---------------N 162 (450)
1245 T ss_dssp HHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSC---------------C
1246 T ss_pred HHHHHHHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHhhc---------------c
1247 Confidence 3333333467777888876 5567888899999998887543 2223333 6777777776431 1
1248
1249
1250 Q NP_000290.2 399 DPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCV 478 (747)
1251 Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (747)
1252 ++++...+..++..-.. ............+++..+...+.. -+..-...+...
1253 T Consensus 163 ~~~~~~~a~~~l~~l~~---------------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~ 215 (450)
1254 T 2JDQ_A 163 RLTMTRNAVWALSNLCR---------------------GKSPPPEFAKVSPCLNVLSWLLFV------SDTDVLADACWA 215 (450)
1255 T ss_dssp CHHHHHHHHHHHHHHHC---------------------CSSSCCCGGGTGGGHHHHHHHTTC------CCHHHHHHHHHH
1256 T ss_pred chhHHHHHHHHHHHHhc---------------------CCCCCchhhhhhhHHHHHHHHhcC------CCHHHHHHHHHH
1257 Confidence 23443344333322110 000111111222333333332221 111122222223
1258
1259
1260 Q NP_000290.2 479 LHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK 558 (747)
1261 Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s 558 (747)
1262 |.++...- ......+.+.++++.++.++.
1263 T Consensus 216 l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~- 244 (450)
1264 T 2JDQ_A 216 LSYLSDGP--------------------------------------------------NDKIQAVIDAGVCRRLVELLM- 244 (450)
1265 T ss_dssp HHHHTSSS--------------------------------------------------HHHHHHHHHTTTHHHHHHHTT-
1266 T ss_pred HHHHhcCC--------------------------------------------------HHHHHHHHHCCHHHHHHHHHc-
1267 Confidence 33222110 001112245567888888887
1268
1269
1270 Q NP_000290.2 559 SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQV 636 (747)
1271 Q Consensus 559 s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~gi 636 (747)
1272 +.++.++..++.+|.+++...+. ....+.+.++++.+..++.+.++.++..++.+|.+++... .. ......++
1273 T Consensus 245 ~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~ 319 (450)
1274 T 2JDQ_A 245 HNDYKVVSPALRAVGNIVTGDDI-----QTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANI 319 (450)
1275 T ss_dssp CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTH
1276 T ss_pred CCCHHHHHHHHHHHHHHhhCChH-----HHHHHhhcchHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCH
1277 Confidence 46778888999999999875332 2233345578888999998888889999999999998762 22 23344567
1278
1279
1280 Q NP_000290.2 637 FPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQ-PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
1281 Q Consensus 637 I~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s-~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
1282 ++.+..++.+ .++.++..++.+|.+++... +.....+.+.++++.+..++.+. ++.++..++.+|.+++...
1283 T Consensus 320 ~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~~ 392 (450)
1284 T 2JDQ_A 320 FPALISILQT------AEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVM-DSKIVQVALNGLENILRLG 392 (450)
1285 T ss_dssp HHHHHHHHHH------SCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSS-CHHHHHHHHHHHHHHHHHH
1286 T ss_pred HHHHHHHHhc------CCHHHHHHHHHHHHHHhcCCCHHHHHHHHHCCcHHHHHHHhhCC-CHHHHHHHHHHHHHHHHHh
1287 Confidence 8888888876 36788899999999998752 34445555556788888888876 7889999999999998765
1288
1289
1290 Q NP_000290.2 716 E 716 (747)
1291 Q Consensus 716 ~ 716 (747)
1292 +
1293 T Consensus 393 ~ 393 (450)
1294 T 2JDQ_A 393 E 393 (450)
1295 T ss_dssp H
1296 T ss_pred H
1297 Confidence 4
1298
1299
1300 No 14
1301 >4E4V_A Importin subunit alpha-2; armadillo repeat, karyopherin, importin, nuclear; HET: GOL, DTT; 2.5283A {Homo sapiens}
1302 Probab=98.45 E-value=3.6e-11 Score=124.32 Aligned_cols=364 Identities=17% Similarity=0.189 Sum_probs=218.6 Template_Neff=12.700
1303
1304 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
1305 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
1306 +++.+...+.+.+ +.++..++.++..++.........+...++++.+..++.+.++.++..++.++..++.........
1307 T Consensus 76 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 155 (485)
1308 T 4E4V_A 76 LIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDL 155 (485)
1309 T ss_dssp CHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTCHHHHHH
1310 T ss_pred cHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChHHHHHHHhcChHHHHHHHhcCCChhHHHHHHHHHHHHhcCCHHHHHH
1311 Confidence 4555666665443 678888889988887654433334444567778888888777888999999999888654432333
1312
1313
1314 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNA-----EIQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
1315 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~-----eVr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
1316 +...++++.+...+. .... .++..++.++..++.......... .++++.+..++..
1317 T Consensus 156 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 218 (485)
1318 T 4E4V_A 156 VIKYGAVDPLLALLA-VPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHH---------------- 218 (485)
1319 T ss_dssp HHHTTCHHHHHHTTC-SSCGGGSCHHHHHHHHHHHHHHTCCCSSCCCHHHHHHHHHHHHHHTTS----------------
1320 T ss_pred HHHCCcHHHHHHHHh-CCCcccchHHHHHHHHHHHHHHHhCCCCCCCHHHHhcHHHHHHHHhcC----------------
1321 Confidence 333456666776665 2222 567778888888876443222222 2556666666542
1322
1323
1324 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
1325 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
1326 .|+++...+..+|..-.. .+......---.+++..|...+.. .+..-...+..
1327 T Consensus 219 ~~~~~~~~a~~~l~~l~~---------------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~ 271 (485)
1328 T 4E4V_A 219 DDPEVLADTCWAISYLTD---------------------GPNERIGMVVKTGVVPQLVKLLGA------SELPIVTPALR 271 (485)
1329 T ss_dssp CCHHHHHHHHHHHHHHTS---------------------SCHHHHHHHHTTTCHHHHHHHHTC------SCHHHHHHHHH
1330 T ss_pred CCHHHHHHHHHHHHHHhc---------------------CChHHhhHHhhCChHHHHHHHhcC------CChHHHHHHHH
1331 Confidence 134444444444432110 000000000012233333333221 11222223333
1332
1333
1334 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
1335 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
1336 +|.++...- ......+.+.++++.|+.++.
1337 T Consensus 272 ~l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 301 (485)
1338 T 4E4V_A 272 AIGNIVTGT--------------------------------------------------DEQTQVVIDAGALAVFPSLLT 301 (485)
1339 T ss_dssp HHHHHTTSC--------------------------------------------------HHHHHHHHHTTGGGGHHHHHT
1340 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHHhCChHHHHHHHhc
1341 Confidence 333332100 001112234567888888887
1342
1343
1344 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGN 634 (747)
1345 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~ 634 (747)
1346 +.++.++..++.+|.+++...+. ....+...++++.|+.++.+.++.++..++.+|.+++.. . .. ..+...
1347 T Consensus 302 -~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~ 375 (485)
1348 T 4E4V_A 302 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHC 375 (485)
1349 T ss_dssp -CSSHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHT
1350 T ss_pred -CCCHHHHHHHHHHHHHHcCCCHH-----HHHHHHHCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCHHHHHHHHhC
1351 Confidence 46778888999999999875332 233334557888899999888888999999999999875 2 12 233445
1352
1353
1354 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQ------PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
1355 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s------~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
1356 ++++.+..++.+ .++.++..++.+|.+++... +.....+.+.++++.|..++.+. ++.++..++.+|
1357 T Consensus 376 ~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l 448 (485)
1358 T 4E4V_A 376 GIIEPLMNLLTA------KDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQNHE-NESVYRASLSLI 448 (485)
1359 T ss_dssp TCHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTHHHHHHTTCCTT-SHHHHHHHHHHH
1360 T ss_pred CcHHHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHHHH
1361 Confidence 677888888776 36788999999999998731 22333344456788888888766 788999999999
1362
1363
1364 Q NP_000290.2 709 SDMWSSKE 716 (747)
1365 Q Consensus 709 snL~~~~~ 716 (747)
1366 .+++...+
1367 T Consensus 449 ~~l~~~~~ 456 (485)
1368 T 4E4V_A 449 EKYFSVEE 456 (485)
1369 T ss_dssp HHHCC---
1370 T ss_pred HHHcCccc
1371 Confidence 99986543
1372
1373
1374 No 15
1375 >4B18_A IMPORTIN SUBUNIT ALPHA-1, TELOMERASE REVERSE; TRANSPORT PROTEIN - PEPTIDE COMPLEX; 2.52A {HOMO SAPIENS}
1376 Probab=98.44 E-value=4e-11 Score=121.64 Aligned_cols=368 Identities=14% Similarity=0.162 Sum_probs=227.4 Template_Neff=13.000
1377
1378 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES--AKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTT 320 (747)
1379 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~--~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~ 320 (747)
1380 +.+++.+...+.+.++.++..++.+|..+...... ....+...++++.+...+.. .++.++..++.++..++.....
1381 T Consensus 16 ~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~ 95 (447)
1382 T 4B18_A 16 GVITSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSL 95 (447)
1383 T ss_dssp CSSCHHHHHHHTSSCHHHHHHHHHHHHHHHHCSSCCCHHHHHTSTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHTSSCHH
1384 T ss_pred CCCcHHHHHHHhcCCHHHHHHHHHHHHHHhCCCCCCCHhHHhcCccHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCcH
1385 Confidence 44556677777777888899999999888753221 11222224667777777765 5677888899999888765433
1386
1387
1388 Q NP_000290.2 321 NKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVV 398 (747)
1389 Q Consensus 321 ~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~ 398 (747)
1390 ....+...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|+.++... .
1391 T Consensus 96 ~~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~ 159 (447)
1392 T 4B18_A 96 QTRIVIQAGAVPIFIELLS-SEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQ---------------N 159 (447)
1393 T ss_dssp HHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGCT---------------T
1394 T ss_pred HHHHHHHcChHHHHHHHhh-CCCHHHHHHHHHHHHHHHccChhHHHHHHHCCcHHHHHHHhhcC---------------C
1395 Confidence 3223333467777888776 5567888899999998887543 2223333 6677777766431 1
1396
1397
1398 Q NP_000290.2 399 DPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCV 478 (747)
1399 Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (747)
1400 ++++...+..+|..-. .............+++..+...++. -+......+...
1401 T Consensus 160 ~~~~~~~~~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~ 212 (447)
1402 T 4B18_A 160 RLTMTRNAVWALSNLC---------------------RGKSPPPEFAKVSPCLNVLSWLLFV------SDTDVLADACWA 212 (447)
1403 T ss_dssp CHHHHHHHHHHHHHHH---------------------CCSSSCCCHHHHGGGHHHHHHHTTS------CCHHHHHHHHHH
1404 T ss_pred ChhHHHHHHHHHHHHh---------------------cCCCCCCcccccccHHHHHHHHhhC------CCHHHHHHHHHH
1405 Confidence 2344333333332211 0000111111122333333322211 111112222222
1406
1407
1408 Q NP_000290.2 479 LHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK 558 (747)
1409 Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s 558 (747)
1410 |.++...- ......+.+.++++.++.++.
1411 T Consensus 213 l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~- 241 (447)
1412 T 4B18_A 213 LSYLSDGP--------------------------------------------------NDKIQAVIDAGVCRRLVELLM- 241 (447)
1413 T ss_dssp HHHHTSSS--------------------------------------------------HHHHHHHHHTTCHHHHHHHTT-
1414 T ss_pred HHHHhcCC--------------------------------------------------HHHHHHHHHCCHHHHHHHHHc-
1415 Confidence 32222100 001112245567888888887
1416
1417
1418 Q NP_000290.2 559 SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQV 636 (747)
1419 Q Consensus 559 s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~gi 636 (747)
1420 +.++.++..++.+|.+++...+. ....+.+.++++.|..++.+.++.++..++.+|.+++... .. ......++
1421 T Consensus 242 ~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~ 316 (447)
1422 T 4B18_A 242 HNDYKVVSPALRAVGNIVTGDDI-----QTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANI 316 (447)
1423 T ss_dssp CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTH
1424 T ss_pred CCCHHHHHHHHHHHHHHhcCChH-----HHHHHhhcchHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCh
1425 Confidence 46778888999999999875332 2233345578888999998888889999999999998762 22 23344567
1426
1427
1428 Q NP_000290.2 637 FPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
1429 Q Consensus 637 I~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
1430 ++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|.+++...
1431 T Consensus 317 ~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~~ 389 (447)
1432 T 4B18_A 317 FPALISILQT------AEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVM-DSKIVQVALNGLENILRLG 389 (447)
1433 T ss_dssp HHHHHHHHHH------SCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSS-CHHHHHHHHHHHHHHHHHH
1434 T ss_pred HHHHHHHHhc------CCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCcHHHHHHHhhCC-CHHHHHHHHHHHHHHHHHh
1435 Confidence 8888888876 3678899999999999875 234445555556788888888876 7889999999999998765
1436
1437
1438 Q NP_000290.2 716 EL 717 (747)
1439 Q Consensus 716 ~~ 717 (747)
1440 +.
1441 T Consensus 390 ~~ 391 (447)
1442 T 4B18_A 390 EQ 391 (447)
1443 T ss_dssp HH
1444 T ss_pred HH
1445 Confidence 43
1446
1447
1448 No 16
1449 >4XZR_B Heh1-NLS, Kap60; karyopherins nuclear import ; 2.25A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
1450 Probab=98.43 E-value=4.3e-11 Score=119.82 Aligned_cols=363 Identities=16% Similarity=0.214 Sum_probs=223.0 Template_Neff=13.200
1451
1452 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTNKLET 325 (747)
1453 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
1454 +.+...+.+.++.++..++..+..++..... ........++++.+...+...+ +.++..++.++..++.........+
1455 T Consensus 4 ~~l~~~l~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 83 (423)
1456 T 4XZR_B 4 PQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVV 83 (423)
1457 T ss_dssp SSSSTTTSSSCHHHHHHHHHHHHHHHSCSSSCCHHHHHTTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHHTSCHHHHHHH
1458 T ss_pred hhHhhhcChHhHHHHHHHHHHHHHHHcCCCCCchHHHHhCCcHHHHHHHhhCCCCHHHHHHHHHHHHHHhCCCchhhhHH
1459 Confidence 4455566667777888888888877654321 1222333466777777776543 6778889999988876543333333
1460
1461
1462 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
1463 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
1464 ...++++.+...+. +.++.++..++.++..++... .....+.. ++++.|..++... ++++.
1465 T Consensus 84 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v~ 146 (423)
1466 T 4XZR_B 84 VDADAVPLFIQLLY-TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN----------------KPSLI 146 (423)
1467 T ss_dssp HHTTCHHHHHHHHH-HSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSC----------------CHHHH
1468 T ss_pred cccchHHHHHHHHh-CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHHhcC----------------CHHHH
1469 Confidence 33467777777776 567788899999999988753 22233333 6677777766521 34444
1470
1471
1472 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
1473 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
1474 ..+..++..-.. .........-..+.++.|...++. .+......+...|.++.
1475 T Consensus 147 ~~a~~~l~~l~~---------------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~ 199 (423)
1476 T 4XZR_B 147 RTATWTLSNLCR---------------------GKKPQPDWSVVSQALPTLAKLIYS------MDTETLVDACWAISYLS 199 (423)
1477 T ss_dssp HHHHHHHHHHHC---------------------CCTTCCCHHHHGGGHHHHHHHTTC------SCHHHHHHHHHHHHHHT
1478 T ss_pred HHHHHHHHHHHc---------------------CCCCCCChHHhccHHHHHHHHhhC------CCHHHHHHHHHHHHHHh
1479 Confidence 444444432111 000001111122334444333321 11112222222333322
1480
1481
1482 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
1483 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
1484 .. +......+.+.++++.++.++. +.++.
1485 T Consensus 200 ~~--------------------------------------------------~~~~~~~~~~~~~~~~l~~~l~-~~~~~ 228 (423)
1486 T 4XZR_B 200 DG--------------------------------------------------PQEAIQAVIDVRIPKRLVELLS-HESTL 228 (423)
1487 T ss_dssp SS--------------------------------------------------SHHHHHHHHHTTHHHHHHHHTT-CSCHH
1488 T ss_pred cC--------------------------------------------------CHHHHHHHHhcCHHHHHHHHhc-CCCHH
1489 Confidence 11 0011122345567888888887 46778
1490
1491
1492 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFPEVT 641 (747)
1493 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~~Ll 641 (747)
1494 ++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++... .. ..+...++++.+.
1495 T Consensus 229 ~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~ 303 (423)
1496 T 4XZR_B 229 VQTPALRAVGNIVTGNDL-----QTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLV 303 (423)
1497 T ss_dssp HHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHH
1498 T ss_pred HHHHHHHHHHHHHcCCHH-----HHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHH
1499 Confidence 888999999999865332 2223334578888888888888889999999999998762 22 3334556778888
1500
1501
1502 Q NP_000290.2 642 RLLTSHTGNTSNSEDILSSACYTVRNLMASQP---QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKEL 717 (747)
1503 Q Consensus 642 ~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~---e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
1504 .++.+ .++.++..++.+|.+++.... .....+.+.++++.+..++.+. ++.++..++.+|.+++...+.
1505 T Consensus 304 ~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~~~~~ 375 (423)
1506 T 4XZR_B 304 KLLEV------AEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIA-DNRIIEVTLDALENILKMGEA 375 (423)
1507 T ss_dssp HHHHH------SCHHHHHHHHHHHHHHHHGGGTCHHHHHHHHHTTCHHHHHHHTTTS-CHHHHHHHHHHHHHHHHHHHH
1508 T ss_pred HHHHh------CCchHHHHHHHHHHHHHhCCCCCHHHHHHHHHCCcHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHHHH
1509 Confidence 88866 367889999999999987532 2234445556788888888876 788899999999999876554
1510
1511
1512 No 17
1513 >5XZX_A Importin subunit alpha-3, Ran-binding protein; nuclear import, TRANSPORT PROTEIN; 3.0A {Homo sapiens}
1514 Probab=98.43 E-value=4.3e-11 Score=119.52 Aligned_cols=133 Identities=19% Similarity=0.169 Sum_probs=87.0 Template_Neff=13.200
1515
1516 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
1517 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
1518 ++.+...+.+.++.++..++.+|..+...... ....+...++++.+...+. ..++.++..++.++..++.........
1519 T Consensus 4 ~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 83 (416)
1520 T 5XZX_A 4 LEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQA 83 (416)
1521 T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHTTSSSSSCCHHHHHTTTCHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHH
1522 T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCHHHHHHcCcHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCChHHHHH
1523 Confidence 44566666677778888999999888764321 1122333456777777776 456778888899998887654333333
1524
1525
1526 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVI 380 (747)
1527 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~ 380 (747)
1528 +...++++.+...+. +.++.++..++.++..++... .....+.. ++++.|..++.
1529 T Consensus 84 ~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 140 (416)
1530 T 5XZX_A 84 VVQSNAVPLFLRLLH-SPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFIS 140 (416)
1531 T ss_dssp HHHTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHTCHHHHTTSCS
1532 T ss_pred HHhcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCccHHHHHHhcC
1533 Confidence 334457777777776 567788899999999988652 22222333 66677776664
1534
1535
1536 No 18
1537 >1JDH_A BETA-CATENIN, hTcf-4; BETA-CATENIN, TCF4, PROTEIN-PROTEIN COMPLEX, TRANSCRIPTION; 1.9A {Homo sapiens} SCOP: a.118.1.1
1538 Probab=98.42 E-value=4.4e-11 Score=123.86 Aligned_cols=378 Identities=19% Similarity=0.226 Sum_probs=227.0 Template_Neff=13.100
1539
1540 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
1541 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
1542 .+++.+...+.+.++.++..++.++..++.........+...++++.+...+.+.++.++..++.++..++.........
1543 T Consensus 101 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 180 (529)
1544 T 1JDH_A 101 GGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLI 180 (529)
1545 T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHH
1546 T ss_pred CCHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCcchHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHH
1547 Confidence 34556666666667788888999998887654333333334567777888887777888899999999888544433333
1548
1549
1550 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
1551 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
1552 +...++++.+...+....+..++..++.++..+.........+.. ++++.+..++... ++++.
1553 T Consensus 181 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~ 244 (529)
1554 T 1JDH_A 181 ILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP----------------SQRLV 244 (529)
1555 T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSS----------------CHHHH
1556 T ss_pred HHHCChhHHHHHHHccCCcHHHHHHHHHHHHHHhcCCccHHHHHHCCHHHHHHHHccCC----------------CHHHH
1557 Confidence 444457777777776333567888888888888875443333333 6667776666432 23333
1558
1559
1560 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
1561 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
1562 ..+..++..-. ........+ .+++..+...++. -+..-...+...|.++.
1563 T Consensus 245 ~~~~~~l~~l~---------------------~~~~~~~~~---~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 294 (529)
1564 T 1JDH_A 245 QNCLWTLRNLS---------------------DAATKQEGM---EGLLGTLVQLLGS------DDINVVTCAAGILSNLT 294 (529)
1565 T ss_dssp HHHHHHHHHHH---------------------TTCTTCSCC---HHHHHHHHHHTTC------SCHHHHHHHHHHHHHHT
1566 T ss_pred HHHHHHHHHHc---------------------chhhhHHHH---chHHHHHHHHhCC------CCHHHHHHHHHHHHHHh
1567 Confidence 33333332110 000000001 2334444333321 11111222223333332
1568
1569
1570 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK-SKKD 562 (747)
1571 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s-s~d~ 562 (747)
1572 ... ......+.+.++++.++..+.. ..++
1573 T Consensus 295 ~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~~~~~~~ 324 (529)
1574 T 1JDH_A 295 CNN--------------------------------------------------YKNKMMVCQVGGIEALVRTVLRAGDRE 324 (529)
1575 T ss_dssp TTC--------------------------------------------------HHHHHHHHHTTHHHHHHHHHHHHTTCH
1576 T ss_pred cCC--------------------------------------------------HHHHHHHHHcCHHHHHHHHHHhcCCCh
1577 Confidence 110 0001112345667777776641 2456
1578
1579
1580 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEV 640 (747)
1581 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~L 640 (747)
1582 .++..++.+|.+++..... .......+...++++.+..++.+. ++.++..++.+|.+++..... ..+...++++.+
1583 T Consensus 325 ~~~~~a~~~l~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l 402 (529)
1584 T 1JDH_A 325 DITEPAICALRHLTSRHQE--AEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 402 (529)
1585 T ss_dssp HHHHHHHHHHHHHTSSSTT--HHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHH
1586 T ss_pred HhHHHHHHHHHHHhcCccc--HHHHHHHHHhcccHHHHHHHHCCCCCHHHHHHHHHHHHHHhcChhhhHHHHhcCHHHHH
1587 Confidence 7788899999998865331 000012222456788888888765 678899999999999876433 334455677888
1588
1589
1590 Q NP_000290.2 641 TRLLTSHTGNTSNS--------------------EDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
1591 Q Consensus 641 l~LL~s~s~~~~~d--------------------~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
1592 ..++.... .+ +.++..++.+|.+++.. ......+...++++.++.++.+. ++.+
1593 T Consensus 403 ~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~~ 476 (529)
1594 T 1JDH_A 403 VQLLVRAH----QDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARD-VHNRIVIRGLNTIPLFVQLLYSP-IENI 476 (529)
1595 T ss_dssp HHHHHHHH----HHHC-----------CBTTBCHHHHHHHHHHHHHHHTTS-HHHHHHHHHTTCHHHHHHGGGCS-CHHH
1596 T ss_pred HHHHHhcC----hhHHHHHhccCcchhHhccCCHHHHHHHHHHHHHHHhcC-ccchHHHHhcCcHHHHHHHhcCC-CHHH
1597 Confidence 88876520 01 67888999999999875 34444455556788888888876 7889
1598
1599
1600 Q NP_000290.2 701 AEAARLLLSDMWSSKELQGVLRQQGF 726 (747)
1601 Q Consensus 701 r~aAL~aLsnL~~~~~~~~~~~~~~~ 726 (747)
1602 +..++.+|.+++...+....+...|+
1603 T Consensus 477 ~~~a~~~l~~l~~~~~~~~~~~~~~~ 502 (529)
1604 T 1JDH_A 477 QRVAAGVLCELAQDKEAAEAIEAEGA 502 (529)
1605 T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHTTC
1606 T ss_pred HHHHHHHHHHHhcCHHHHHHHHHcCc
1607 Confidence 99999999999987765544444443
1608
1609
1610 No 19
1611 >3IFQ_A plakoglobin, E-cadherin; armadillo repeat, Cardiomyopathy, Cell adhesion; HET: SO4; 2.8A {Homo sapiens}
1612 Probab=98.42 E-value=4.5e-11 Score=124.53 Aligned_cols=381 Identities=19% Similarity=0.234 Sum_probs=227.1 Template_Neff=13.100
1613
1614 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
1615 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
1616 +++.+...+.+.+..++..++.++..++.........+...++++.+...+.+.++.++..++.++..++.........+
1617 T Consensus 104 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 183 (553)
1618 T 3IFQ_A 104 GIPALVRMLSSPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLII 183 (553)
1619 T ss_dssp HHHHHHHGGGCCCHHHHHHHHHHHHHHHHHCTTHHHHHHHTTGGGGTGGGGGSSCHHHHHHHHHHHHHHHTTCHHHHHHH
1620 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHhcCChHHHHHHHhcCHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHH
1621 Confidence 45556666666677888889999988876543333333335677788888877778888999999998876444333333
1622
1623
1624 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
1625 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
1626 ...++++.+...+....+..++..++.++..+.........+.. ++++.+..++... ++++..
1627 T Consensus 184 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~~ 247 (553)
1628 T 3IFQ_A 184 LANGGPQALVQIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLTSN----------------SPRLVQ 247 (553)
1629 T ss_dssp HHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHGGGGSS----------------CHHHHH
1630 T ss_pred HHCCHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCCcchHHHHHHCchHHHHHHHHhcC----------------CHHHHH
1631 Confidence 34456777777776333567888888888888775444333443 6667777666531 233333
1632
1633
1634 Q NP_000290.2 405 NATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSY 484 (747)
1635 Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (747)
1636 .+..++..-.. ...... ...++++.+...++. .+..-...+...|.++..
1637 T Consensus 248 ~a~~~l~~l~~---------------------~~~~~~---~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~ 297 (553)
1638 T 3IFQ_A 248 NCLWTLRNLSD---------------------VATKQE---GLESVLKILVNQLSV------DDVNVLTCATGTLSNLTC 297 (553)
1639 T ss_dssp HHHHHHHHHHT---------------------TCTTCS---CCHHHHHHHHTTTTC------CCHHHHHHHHHHHHHHTT
1640 T ss_pred HHHHHHHHhCC---------------------hhHHHH---HHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHHHc
1641 Confidence 33333322110 000011 112344444433321 111222233333333321
1642
1643
1644 Q NP_000290.2 485 RLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK-SKKDA 563 (747)
1645 Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s-s~d~e 563 (747)
1646 ... .....+.+.++++.++..+.. ..++.
1647 T Consensus 298 ~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~~~~~~~~ 327 (553)
1648 T 3IFQ_A 298 NNS--------------------------------------------------KNKTLVTQNSGVEALIHAILRAGDKDD 327 (553)
1649 T ss_dssp TCH--------------------------------------------------HHHHHHTTTTHHHHHHHHHHHHTTCHH
1650 T ss_pred CCH--------------------------------------------------HHHHHHHHccHHHHHHHHHHHcCCChH
1651 Confidence 100 001122345677777776652 14566
1652
1653
1654 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN-SDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVT 641 (747)
1655 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d-~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll 641 (747)
1656 ++..++.+|.+++..... ... ....+...++++.+..++.+.+ +.++..++.+|.+++..... ......++++.+.
1657 T Consensus 328 ~~~~a~~~l~~l~~~~~~-~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~ 405 (553)
1658 T 3IFQ_A 328 ITEPAVCALRHLTSRHPE-AEM-AQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLV 405 (553)
1659 T ss_dssp HHHHHHHHHHHHTSSSTT-HHH-HHHHHHTTTHHHHHHHGGGCTTCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHH
1660 T ss_pred hHHHHHHHHHHHhcCCCh-HHH-HHHHHHHcchHHHHHHHHcCCCChHHHHHHHHHHHHHhcCcccHHHHHHccHHHHHH
1661 Confidence 788889999998865321 000 0112234567888888887654 78889999999999876433 2334456778888
1662
1663
1664 Q NP_000290.2 642 RLLTSHTGN---------------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
1665 Q Consensus 642 ~LL~s~s~~---------------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
1666 .++...... ......++..++.+|.+++.. +.....+...++++.++.++.+. ++.++..++.
1667 T Consensus 406 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~ 483 (553)
1668 T 3IFQ_A 406 QLLVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGALHILARD-PMNRMEIFRLNTIPLFVQLLYSS-VENIQRVAAG 483 (553)
1669 T ss_dssp HHHHHHHHHHHHHHHTTCCCTTCSSCCHHHHHHHHHHHHHHHTTS-HHHHHHHHHTTCHHHHHHHTTCS-CHHHHHHHHH
1670 T ss_pred HHHHHcCcchhHHHhhcccCccccCCCHHHHHHHHHHHHHHHhcC-hhhHHHHHHcCChHHHHHHHhCC-CHHHHHHHHH
1671 Confidence 877652100 000027788899999999874 44445555667888888888866 7889999999
1672
1673
1674 Q NP_000290.2 707 LLSDMWSSKELQGVLRQQGF 726 (747)
1675 Q Consensus 707 aLsnL~~~~~~~~~~~~~~~ 726 (747)
1676 +|.+++...+....+.+.|.
1677 T Consensus 484 ~l~~l~~~~~~~~~~~~~~~ 503 (553)
1678 T 3IFQ_A 484 VLCELAQDKEAADAIDAEGA 503 (553)
1679 T ss_dssp HHHHHTTSHHHHHHHHHTTT
1680 T ss_pred HHHHHHcCHHHHHHHHHCCc
1681 Confidence 99999987766555554443
1682
1683
1684 No 20
1685 >4UAD_A Importin alpha import adaptor, Influenza; importin karyopherin complex NLS, PROTEIN; 2.42A {Homo sapiens}
1686 Probab=98.39 E-value=6e-11 Score=121.78 Aligned_cols=372 Identities=17% Similarity=0.175 Sum_probs=218.3 Template_Neff=12.900
1687
1688 Q NP_000290.2 246 TIPKAVQYLSS-QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
1689 Q Consensus 246 iL~~Ll~lL~s-sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
1690 +++.+...+.+ .++.++..++.++..++.........+...++++.+..++.+.+..++..++.++..++.........
1691 T Consensus 68 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 147 (479)
1692 T 4UAD_A 68 VVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDY 147 (479)
1693 T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHTSCHHHHHH
1694 T ss_pred hHHHHHHHhhcCCCHHHHHHHHHHHHHHhCCCchHHHHHHHcCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHH
1695 Confidence 45556666654 56778888899998887654333333333567777888887777888899999999887654433333
1696
1697
1698 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI-A-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
1699 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lv-e-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
1700 +...+++..+...+....++.++..++.++..++.......... . ++++.++.++... ++++
1701 T Consensus 148 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~ 211 (479)
1702 T 4UAD_A 148 VLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSS----------------DSDL 211 (479)
1703 T ss_dssp HHHTTCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCSSCCCGGGTGGGHHHHHHHTTCC----------------CHHH
1704 T ss_pred HHhCCcHHHHHHHhhcCCchHHHHHHHHHHHHHHcCCCCCchhhcccchHHHHHHHhcCC----------------CHHH
1705 Confidence 33345666677766533456788888888888876542222222 1 5666666666431 2333
1706
1707
1708 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
1709 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
1710 -..+..++..-... .+ ...+.+ .-.+.+..|...++. .+..-...+...|.++
1711 T Consensus 212 ~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l 264 (479)
1712 T 4UAD_A 212 LADACWALSYLSDG------PN--------------EKIQAV-IDSGVCRRLVELLMH------NDYKVASPALRAVGNI 264 (479)
1713 T ss_dssp HHHHHHHHHHHTSS------SH--------------HHHHHH-HHTTCHHHHHHGGGC------SCHHHHHHHHHHHHHH
1714 T ss_pred HHHHHHHHHHHhcC------ch--------------HHHHHH-HhCCHHHHHHHHhcC------CCHHhHHHHHHHHHHH
1715 Confidence 33333333221100 00 000000 012333333333221 0111111222222222
1716
1717
1718 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
1719 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
1720 .... ......+.+.++++.|+.++. +.++
1721 T Consensus 265 ~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~ 293 (479)
1722 T 4UAD_A 265 VTGD--------------------------------------------------DIQTQVILNCSALPCLLHLLS-SPKE 293 (479)
1723 T ss_dssp TTSC--------------------------------------------------HHHHHHHHTTTCHHHHHHHTT-CSSH
1724 T ss_pred hcCC--------------------------------------------------HHHHHHHHhcChHHHHHHHhh-CCCH
1725 Confidence 2100 000112234567888888887 4677
1726
1727
1728 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGNQVFPE 639 (747)
1729 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~giI~~ 639 (747)
1730 .++..++.+|.+++...+. ....+.+.++++.|..++.+.++.++..++.+|.+++.. ... ..+...++++.
1731 T Consensus 294 ~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~ 368 (479)
1732 T 4UAD_A 294 SIRKEACWTISNITAGNRA-----QIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKP 368 (479)
1733 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHH
1734 T ss_pred HHHHHHHHHHHHHHcCCHH-----HHHHHHHCCHHHHHHHHHhccCHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCcHHH
1735 Confidence 8888999999999865332 223334557888999999888889999999999999874 222 23344567788
1736
1737
1738 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQ-----------YFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
1739 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~-----------Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
1740 +..++.+ .++.++..++.+|.+++...+..... +.+.+.++.+..++.+. ++.++..++.+|
1741 T Consensus 369 l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~~v~~~a~~~l 441 (479)
1742 T 4UAD_A 369 LCDLLTV------MDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIEEAYGLDKIEFLQSHE-NQEIYQKAFDLI 441 (479)
1743 T ss_dssp HHGGGGC------SCHHHHHHHHHHHHHHHHHHHHHTTTTSCCCCTTHHHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHH
1744 T ss_pred HHHHhhc------CCHHHHHHHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHhchHHHHHHHHhCC-cHHHHHHHHHHH
1745 Confidence 8888776 36788889999999998753322111 34445677888888766 788999999999
1746
1747
1748 Q NP_000290.2 709 SDMWSSKELQGVLRQ 723 (747)
1749 Q Consensus 709 snL~~~~~~~~~~~~ 723 (747)
1750 .+++...+....+.+
1751 T Consensus 442 ~~l~~~~~~~~~~~~ 456 (479)
1752 T 4UAD_A 442 EHYFGVEDDDSSLAP 456 (479)
1753 T ss_dssp HHHSCC---------
1754 T ss_pred HHhhCCCCCchhccc
1755 Confidence 999977665554443
1756
1757
1758 No 21
1759 >5ZHX_D Rap1 GTPase-GDP dissociation stimulator 1; armadillo GEF chaperone, ONCOPROTEIN; HET: FAR; 3.5A {Homo sapiens}
1760 Probab=98.39 E-value=6.3e-11 Score=120.93 Aligned_cols=407 Identities=17% Similarity=0.217 Sum_probs=228.2 Template_Neff=13.200
1761
1762 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP--NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
1763 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~--d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
1764 +++.+...+.+.++.++..++.++..++...+.....+...++++.+..++... ++.++..++.++..++.... ...
1765 T Consensus 19 ~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~v~~~a~~~l~~l~~~~~-~~~ 97 (487)
1766 T 5ZHX_D 19 LISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELES-SKE 97 (487)
1767 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHTTSTTCHHHHHHHHHTTCHHHHHHHHHHTSSCSHHHHHHHHHHHHHTTSSH-HHH
1768 T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHHcccCCCHHHHHHHHHHHHHHHcchh-HHH
1769 Confidence 556677777777888999999999998875544444444556778888888765 77888899999998876532 222
1770
1771
1772 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
1773 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
1774 .+...++++.+...+....++.++..++.++..++........+.. ++++.|..++....... .....+.
1775 T Consensus 98 ~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---------~~~~~~~ 168 (487)
1776 T 5ZHX_D 98 QFASTNIAEELVKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSD---------KEDDITE 168 (487)
1777 T ss_dssp HHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTSHHHHHHHHHHTHHHHHHHHHHHTSSCC---------CHHHHHH
1778 T ss_pred HHhhCCHHHHHHHHHHhccChHHHHHHHHHHHHHhcCHHHHHHHHHCCHHHHHHHHHHhcCCCC---------CHHHHHH
1779 Confidence 3334467777888776222677888899999998876444444444 67777777776432100 0000000
1780
1781
1782 Q NP_000290.2 403 FFNATGCLR----------KRL------GMRELLALVPQ-------RATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQ 459 (747)
1783 Q Consensus 403 ~~~~~~~~~----------~~~------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (747)
1784 +..+...+. +-+ -+..++.+... .+...-.+++..+..+..+.. .+.++.+...+.
1785 T Consensus 169 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~ 247 (487)
1786 T 5ZHX_D 169 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVD-NGIVEKLMDLLD 247 (487)
1787 T ss_dssp HHHHHHHHHHHTTSHHHHHHHSSSSSSSHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSHHHHHHHHT-TTHHHHHHHHHH
1788 T ss_pred HHHHHHHHHHHHhccHHHHHHhhCCCchHHHHHHHHccCCCHHHHHHHHHHHHHHHcCchHHHHHHh-cCHHHHHHHHHH
1789 Confidence 000000000 000 00111111100 000000011111111111000 011222211111
1790
1791
1792 Q NP_000290.2 460 NCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKG 539 (747)
1793 Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~ 539 (747)
1794 .... .-+..-...+..+|.|+. .. . ..
1795 T Consensus 248 ~~~~--~~~~~~~~~a~~~l~~l~-----------------------------------~~---------------~-~~ 274 (487)
1796 T 5ZHX_D 248 RHVE--DGNVTVQHAALSALRNLA-----------------------------------IP---------------V-IN 274 (487)
1797 T ss_dssp HTSS--SSCHHHHHHHHHHHHHHT-----------------------------------CS---------------H-HH
1798 T ss_pred hccc--CCCHHHHHHHHHHHHHhc-----------------------------------CC---------------h-hh
1799 Confidence 0000 000000111111111111 00 0 01
1800
1801
1802 Q NP_000290.2 540 SGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS-DVVRSGASL 618 (747)
1803 Q Consensus 540 ~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~-eVr~~AL~a 618 (747)
1804 ...+.+.++++.++.++. +.++.++..++++|.+++...+. . ........++++.++.++.+.+. .++..++++
1805 T Consensus 275 ~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~---~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~ 349 (487)
1806 T 5ZHX_D 275 KAKMLSAGVTEAVLKFLK-SEMPPVQFKLLGTLRMLIDAQAE---A-AEQLGKNVKLVERLVEWCEAKDHAGVMGESNRL 349 (487)
1807 T ss_dssp HHHHHHHTHHHHHHTTSS-CCCHHHHHHHHHHHHHHTSSCHH---H-HHHHHHCHHHHHHHHHHHTCCSCCHHHHHHHHH
1808 T ss_pred HHHHHHcChHHHHHHHHh-CCCHHHHHHHHHHHHHHHhhcHH---H-HHHhccccCHHHHHHHHHHhcCchhhHHHHHHH
1809 Confidence 122345678888888888 46788888999999999875332 1 11221224678888888887665 888999999
1810
1811
1812 Q NP_000290.2 619 LSNMSRHPL---L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCR 693 (747)
1813 Q Consensus 619 LsnLa~~~e---~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~ 693 (747)
1814 |.+++.... . ..+...++++.+..++.. .++.++..++.+|.+++...+ .....+.+.++++.++.++.
1815 T Consensus 350 l~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 423 (487)
1816 T 5ZHX_D 350 LSALIRHSKSKDVIKTIVQSGGIKHLVTMATS------EHVIMQNEALVALALIAALELGTAEKDLESAKLVQILHRLLA 423 (487)
1817 T ss_dssp HHHHHHHHCCHHHHHHHHHHTCHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHTS
1818 T ss_pred HHHHHHHhcchhHHHHHHHcchHHHHHHHhcC------CCHHHHHHHHHHHHHHHHcCCCchHHHHhhhhHHHHHHHHHh
1819 Confidence 999986522 2 233445677888888776 367889999999999987542 23333444457888888887
1820
1821
1822 Q NP_000290.2 694 SS-ASPKAAEAARLLLSDMWSSKELQGVLRQQGFD 727 (747)
1823 Q Consensus 694 s~-~d~eVr~aAL~aLsnL~~~~~~~~~~~~~~~~ 727 (747)
1824 .. .++.++..++.+|.+++...+....+...|+-
1825 T Consensus 424 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 458 (487)
1826 T 5ZHX_D 424 DERSAPEIKYNSMVLICALMGSECLHKEVQDLAFL 458 (487)
1827 T ss_dssp SSCCSTTCTHHHHHHHHTSCSSSCCSTTTTTHHHH
1828 T ss_pred cccCcHHHHHHHHHHHHHHhCcHHHHHHHHHhchH
1829 Confidence 32 15788999999999999887766666555543
1830
1831
1832 No 22
1833 >1EE4_A KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
1834 Probab=98.36 E-value=8.2e-11 Score=117.69 Aligned_cols=364 Identities=16% Similarity=0.224 Sum_probs=221.8 Template_Neff=13.200
1835
1836 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTNKLE 324 (747)
1837 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
1838 ++.+...+.+.++.++..++..+..++..... ....+...++++.+...+...+ +.++..++.++..++.........
1839 T Consensus 3 ~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 82 (423)
1840 T 1EE4_A 3 LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKV 82 (423)
1841 T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHHCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHH
1842 T ss_pred hHHHHHHhccccHHHHHHHHHHHHHHHhCCCCCchHHHHhcChHHHHHHHhhcCCcHHHHHHHHHHHHHHhCCCHHHHHH
1843 Confidence 44566666777788888888888888754321 2222333456777777776543 667888899998887644333333
1844
1845
1846 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
1847 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
1848 +...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|..++... ++++
1849 T Consensus 83 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~ 145 (423)
1850 T 1EE4_A 83 VVDADAVPLFIQLLY-TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN----------------KPSL 145 (423)
1851 T ss_dssp HHHTTHHHHHHHHHH-HSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSC----------------CHHH
1852 T ss_pred HHhCChHHHHHHHHh-CCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhcC----------------CHHH
1853 Confidence 333456777777776 5677888899999998886532 2223333 6667776666421 2344
1854
1855
1856 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
1857 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
1858 -..+..++..-... ...........+++..|...+.. .+......+...|.++
1859 T Consensus 146 ~~~a~~~l~~l~~~---------------------~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l 198 (423)
1860 T 1EE4_A 146 IRTATWTLSNLCRG---------------------KKPQPDWSVVSQALPTLAKLIYS------MDTETLVDACWAISYL 198 (423)
1861 T ss_dssp HHHHHHHHHHHHCC---------------------STTCCCHHHHGGGHHHHHHHTTC------SCHHHHHHHHHHHHHH
1862 T ss_pred HHHHHHHHHHHHcC---------------------CCCCCChHHHhhHHHHHHHHHHc------CCHHHHHHHHHHHHHH
1863 Confidence 44444443321100 00000111122334433333221 1111112222222222
1864
1865
1866 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
1867 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
1868 ... +......+.+.++++.+..++. +.++
1869 T Consensus 199 ~~~--------------------------------------------------~~~~~~~~~~~~~~~~l~~~l~-~~~~ 227 (423)
1870 T 1EE4_A 199 SDG--------------------------------------------------PQEAIQAVIDVRIPKRLVELLS-HEST 227 (423)
1871 T ss_dssp TSS--------------------------------------------------CHHHHHHHHHTTHHHHHHHHTT-CSCH
1872 T ss_pred hcC--------------------------------------------------CHHHHHHHHhcCHHHHHHHHhc-CCCc
1873 Confidence 110 0001112234567778888887 4677
1874
1875
1876 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEV 640 (747)
1877 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~L 640 (747)
1878 .++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. +.. ..+...++++.+
1879 T Consensus 228 ~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l 302 (423)
1880 T 1EE4_A 228 LVQTPALRAVGNIVTGNDL-----QTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPL 302 (423)
1881 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHH
1882 T ss_pred chhHHHHHHHHHHHhCChH-----HHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHH
1883 Confidence 8888999999998865332 122333457888888888888888999999999999875 222 334455677888
1884
1885
1886 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQ---PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKEL 717 (747)
1887 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s---~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
1888 ..++.+ .++.++..++.+|.+++... +.....+.+.++++.+..++.+. ++.++..++.+|.+++...+.
1889 T Consensus 303 ~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~a~~~l~~l~~~~~~ 375 (423)
1890 T 1EE4_A 303 VKLLEV------AEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIA-DNRIIEVTLDALENILKMGEA 375 (423)
1891 T ss_dssp HHHHHH------SCHHHHHHHHHHHHHHHGGGGTCHHHHHHHHHTTCHHHHHHGGGSS-CHHHHHHHHHHHHHHHHHHHH
1892 T ss_pred HHHHhc------CCHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHCCCHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHH
1893 Confidence 888766 36788999999999998753 23334444456788888888876 788999999999999876554
1894
1895
1896 No 23
1897 >1EE4_B KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
1898 Probab=98.36 E-value=8.2e-11 Score=117.69 Aligned_cols=364 Identities=16% Similarity=0.224 Sum_probs=221.8 Template_Neff=13.200
1899
1900 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTNKLE 324 (747)
1901 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
1902 ++.+...+.+.++.++..++..+..++..... ....+...++++.+...+...+ +.++..++.++..++.........
1903 T Consensus 3 ~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 82 (423)
1904 T 1EE4_B 3 LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKV 82 (423)
1905 T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHCCSSSCCHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHH
1906 T ss_pred hHHHHHHhccccHHHHHHHHHHHHHHHhCCCCCchHHHHhcChHHHHHHHhhcCCcHHHHHHHHHHHHHHhCCCHHHHHH
1907 Confidence 44566666777788888888888888754321 2222333456777777776543 667888899998887644333333
1908
1909
1910 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
1911 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
1912 +...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|..++... ++++
1913 T Consensus 83 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~ 145 (423)
1914 T 1EE4_B 83 VVDADAVPLFIQLLY-TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN----------------KPSL 145 (423)
1915 T ss_dssp HHHTTHHHHHHHHHH-HSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSC----------------CHHH
1916 T ss_pred HHhCChHHHHHHHHh-CCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhcC----------------CHHH
1917 Confidence 333456777777776 5677888899999998886532 2223333 6667776666421 2344
1918
1919
1920 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
1921 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
1922 -..+..++..-... ...........+++..|...+.. .+......+...|.++
1923 T Consensus 146 ~~~a~~~l~~l~~~---------------------~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l 198 (423)
1924 T 1EE4_B 146 IRTATWTLSNLCRG---------------------KKPQPDWSVVSQALPTLAKLIYS------MDTETLVDACWAISYL 198 (423)
1925 T ss_dssp HHHHHHHHHHHHCC---------------------SSSCCCHHHHGGGHHHHHHHTTC------SCHHHHHHHHHHHHHH
1926 T ss_pred HHHHHHHHHHHHcC---------------------CCCCCChHHHhhHHHHHHHHHHc------CCHHHHHHHHHHHHHH
1927 Confidence 44444443321100 00000111122334433333221 1111112222222222
1928
1929
1930 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
1931 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
1932 ... +......+.+.++++.+..++. +.++
1933 T Consensus 199 ~~~--------------------------------------------------~~~~~~~~~~~~~~~~l~~~l~-~~~~ 227 (423)
1934 T 1EE4_B 199 SDG--------------------------------------------------PQEAIQAVIDVRIPKRLVELLS-HEST 227 (423)
1935 T ss_dssp HSS--------------------------------------------------CHHHHHHHHHTTHHHHHHHHTT-CSCH
1936 T ss_pred hcC--------------------------------------------------CHHHHHHHHhcCHHHHHHHHhc-CCCc
1937 Confidence 110 0001112234567778888887 4677
1938
1939
1940 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEV 640 (747)
1941 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~L 640 (747)
1942 .++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. +.. ..+...++++.+
1943 T Consensus 228 ~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l 302 (423)
1944 T 1EE4_B 228 LVQTPALRAVGNIVTGNDL-----QTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPL 302 (423)
1945 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHH
1946 T ss_pred chhHHHHHHHHHHHhCChH-----HHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHH
1947 Confidence 8888999999998865332 122333457888888888888888999999999999875 222 334455677888
1948
1949
1950 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQ---PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKEL 717 (747)
1951 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s---~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
1952 ..++.+ .++.++..++.+|.+++... +.....+.+.++++.+..++.+. ++.++..++.+|.+++...+.
1953 T Consensus 303 ~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~a~~~l~~l~~~~~~ 375 (423)
1954 T 1EE4_B 303 VKLLEV------AEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIA-DNRIIEVTLDALENILKMGEA 375 (423)
1955 T ss_dssp HHHHHH------SCHHHHHHHHHHHHHHHGGGGTCTHHHHHHHHTTCHHHHHHGGGSS-CHHHHHHHHHHHHHHHHHHHH
1956 T ss_pred HHHHhc------CCHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHCCCHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHH
1957 Confidence 888766 36788999999999998753 23334444456788888888876 788999999999999876554
1958
1959
1960 No 24
1961 >4EV8_A Catenin beta-1; mouse catenin, CELL ADHESION; HET: URE; 1.9A {Mus musculus}
1962 Probab=98.34 E-value=9.8e-11 Score=121.45 Aligned_cols=382 Identities=19% Similarity=0.227 Sum_probs=226.5 Template_Neff=13.100
1963
1964 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
1965 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
1966 +++.+...+.+.++.++..++.++..++.........+...++++.+...+.+.+..++..++.++..++.........+
1967 T Consensus 103 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 182 (538)
1968 T 4EV8_A 103 GIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLII 182 (538)
1969 T ss_pred cHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
1970 Confidence 45556666666677888889999988876543333333345677788888877778888999999998886444333334
1971
1972
1973 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
1974 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
1975 ...++++.+...+....+..++..++.++..+.........+.. ++++.+..++... ++++..
1976 T Consensus 183 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~~ 246 (538)
1977 T 4EV8_A 183 LASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP----------------SQRLVQ 246 (538)
1978 T ss_pred HHCChHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhcCC----------------CHHHHH
1979 Confidence 44457777777776333567788888888888765444333433 6667777666432 233333
1980
1981
1982 Q NP_000290.2 405 NATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSY 484 (747)
1983 Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (747)
1984 .+..++..-.. .......+ .+.+..+...+.. .+..-...+...|.++..
1985 T Consensus 247 ~a~~~l~~l~~---------------------~~~~~~~~---~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~ 296 (538)
1986 T 4EV8_A 247 NCLWTLRNLSD---------------------AATKQEGM---EGLLGTLVQLLGS------DDINVVTCAAGILSNLTC 296 (538)
1987 T ss_pred HHHHHHHHHHc---------------------CCCchHHH---cCcHHHHHHHhcC------CCHHHHHHHHHHHHHHHc
1988 Confidence 33333322110 00000001 2333333333321 111112222222333221
1989
1990
1991 Q NP_000290.2 485 RLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK-SKKDA 563 (747)
1992 Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s-s~d~e 563 (747)
1993 .- ......+.+.++++.++..+.. ..++.
1994 T Consensus 297 ~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 326 (538)
1995 T 4EV8_A 297 NN--------------------------------------------------YKNKMMVCQVGGIEALVRTVLRAGDRED 326 (538)
1996 T ss_pred CC--------------------------------------------------HHHHHHHHHCCcHHHHHHHHhcCCCCHH
1997 Confidence 00 0011122455677777776652 14566
1998
1999
2000 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVT 641 (747)
2001 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll 641 (747)
2002 ++..++.+|.+++..... .......+...++++.|..++.+. +..++..++.+|.+++..... ..+...++++.+.
2003 T Consensus 327 ~~~~a~~~l~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~ 404 (538)
2004 T 4EV8_A 327 ITEPAICALRHLTSRHQE--AEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLV 404 (538)
2005 T ss_pred HHHHHHHHHHHHHcCCCC--hHHHHHHHHHCCHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHCChHHHHH
2006 Confidence 778899999998865331 000012223457788888888765 678889999999999876433 3344556778888
2007
2008
2009 Q NP_000290.2 642 RLLTSHTGNT----------------SNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
2010 Q Consensus 642 ~LL~s~s~~~----------------~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
2011 .++....... ...+.++..++.+|.+++.. ......+...++++.++.++.+. ++.++..++
2012 T Consensus 405 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~a~ 482 (538)
2013 T 4EV8_A 405 QLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARD-VHNRIVIRGLNTIPLFVQLLYSP-IENIQRVAA 482 (538)
2014 T ss_pred HHHcCCCcchhhhhccCchHHHHHhcCCCHHHHHHHHHHHHHHhCC-cchhHHHHHcChHHHHHHHhcCC-CHHHHHHHH
2015 Confidence 7776521000 00156677899999999875 33344445556788888888876 788999999
2016
2017
2018 Q NP_000290.2 706 LLLSDMWSSKELQGVLRQQGFD 727 (747)
2019 Q Consensus 706 ~aLsnL~~~~~~~~~~~~~~~~ 727 (747)
2020 .+|.+++...+....+.+.|+-
2021 T Consensus 483 ~~l~~l~~~~~~~~~~~~~~~~ 504 (538)
2022 T 4EV8_A 483 GVLCELAQDKEAAEAIEAEGAT 504 (538)
2023 T ss_pred HHHHHHHcCHHHHHHHHHCCcH
2024 Confidence 9999999877665555544443
2025
2026
2027 No 25
2028 >4RXH_B Importin subunit alpha, Large T; ARM repeat, NLS, nuclear import; 1.7553A {Neurospora crassa}
2029 Probab=98.34 E-value=1.1e-10 Score=121.65 Aligned_cols=365 Identities=17% Similarity=0.175 Sum_probs=215.9 Template_Neff=12.500
2030
2031 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
2032 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
2033 +++.+...+.+.++.++..++.++..++.........+...++++.+...+.+.++.++..++.++..++..........
2034 T Consensus 72 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 151 (495)
2035 T 4RXH_B 72 VVGRFVEFLRSPHTLVQFEAAWALTNIASGSATQTQVVIEAGAVPIFVELLGSPEPDVREQAVWALGNIAGDSPQCRDYV 151 (495)
2036 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHH
2037 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChHHHHHHHhCChHHHHHHHhcCCCHHHHHHHHHHHHHHHCCCHHHHHHH
2038 Confidence 45566666666777888889999988876543333333345677788888887778889999999998886533333333
2039
2040
2041 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEE-LIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
2042 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~-Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
2043 ...++++.+...+....++.++..++.++..++........ ... ++++.+..++..+ ++++-
2044 T Consensus 152 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v~ 215 (495)
2045 T 4RXH_B 152 LSCGALRPLLTLLGDSRKLSMLRNATWTLSNFCRGKTPQPDWNTIAPALPVLAKLVYSL----------------DDEVL 215 (495)
2046 T ss_dssp HHTTCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCTTCCCHHHHTTHHHHHHHHTTCS----------------SHHHH
2047 T ss_pred HhCCcHHHHHHHhccccCHHHHHHHHHHHHHHhCCCCCCCcHHhhcCHHHHHHHHhhCC----------------CHHHH
2048 Confidence 33456777777775333567888889999988875422211 112 5666666666431 23333
2049
2050
2051 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
2052 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
2053 ..+..++..-. .........---.+++..|...++. .+..-...+...|.++.
2054 T Consensus 216 ~~a~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 268 (495)
2055 T 4RXH_B 216 IDACWAISYLS---------------------DGSNDKIQAVIEAGIPRRLVELLMH------ASTSVQTPALRSVGNIV 268 (495)
2056 T ss_dssp HHHHHHHHHHT---------------------SSCHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHT
2057 T ss_pred HHHHHHHHHHh---------------------cCCHHHHHHHHHCChHHHHHHHHhc------CCccHHHHHHHHHHHHh
2058 Confidence 33333332110 0000000000011344444443321 01111122222222222
2059
2060
2061 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
2062 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
2063 ..- ......+.+.++++.++.++. +.++.
2064 T Consensus 269 ~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~~ 297 (495)
2065 T 4RXH_B 269 TGD--------------------------------------------------DVQTQVIINCGALPCLLSLLS-SNKDG 297 (495)
2066 T ss_dssp TSC--------------------------------------------------HHHHHHHHHTTHHHHHHHHTT-CSCHH
2067 T ss_pred cCC--------------------------------------------------HHHHHHHHhCCHHHHHHHHHh-CCCHH
2068 Confidence 100 001112234567778888887 46778
2069
2070
2071 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP----LL-HRVMGNQVFP 638 (747)
2072 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~----e~-~~ll~~giI~ 638 (747)
2073 ++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++... .. ..+...++++
2074 T Consensus 298 v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 372 (495)
2075 T 4RXH_B 298 IRKEACWTISNITAGNSA-----QIQSVIDANIIPPLIHLLSHADLKTRKEACWAISNATSGGLQKPDQIRYLVAQGCIK 372 (495)
2076 T ss_dssp HHHHHHHHHHHHHTSCHH-----HHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHTTTTTTTCTHHHHHHHHTTCHH
2077 T ss_pred HHHHHHHHHHHHHcCCHH-----HHHHHHHCCcHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHCCCHH
2078 Confidence 888899999998764332 1223344578888888888778888889999999988752 11 2233446777
2079
2080
2081 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL--------------AKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
2082 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~--------------~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
2083 .+..++.+ .++.++..++.+|.+++...... ...+.+.++++.|..++.+. ++.++..+
2084 T Consensus 373 ~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a 445 (495)
2085 T 4RXH_B 373 PLCDLLAC------PDNKIIQVALDGLENILKVGELDKNAAGDGPDSINRYALFIEECGGMEKIHDCQTNA-NEEIYMKA 445 (495)
2086 T ss_dssp HHHHGGGC------SCHHHHHHHHHHHHHHHHHHHHHHHTC-----CCCHHHHHHHHTTHHHHHHHGGGCC-SSTTHHHH
2087 T ss_pred HHHHHhhC------CCHHHHHHHHHHHHHHHHHhhHccccCCCCCchHHHHHHHHHHccchHHHHHhhhcC-CHHHHHHH
2088 Confidence 77777766 36778888999999888753211 22333455677788888766 78899999
2089
2090
2091 Q NP_000290.2 705 RLLLSDMWSSKE 716 (747)
2092 Q Consensus 705 L~aLsnL~~~~~ 716 (747)
2093 +.+|.+++...+
2094 T Consensus 446 ~~~l~~l~~~~~ 457 (495)
2095 T 4RXH_B 446 YNIIEKYFSDED 457 (495)
2096 T ss_dssp HHHHHHHCC---
2097 T ss_pred HHHHHHhcCccc
2098 Confidence 999999886544
2099
2100
2101 No 26
2102 >4BQK_A IMPORTIN SUBUNIT ALPHA-1A, T-DNA BORDER; TRANSPORT PROTEIN, HYDROLASE, NUCLEAR LOCALIZATION; HET: PEG; 1.997A {ORYZA SATIVA}
2103 Probab=98.32 E-value=1.2e-10 Score=118.46 Aligned_cols=366 Identities=17% Similarity=0.164 Sum_probs=217.0 Template_Neff=13.000
2104
2105 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2106 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
2107 +++.+...+.+.+ +.++..++.++..++.........+...++++.+..++.+.+..++..++.++..++.........
2108 T Consensus 46 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 125 (456)
2109 T 4BQK_A 46 VVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDL 125 (456)
2110 T ss_dssp CHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHH
2111 T ss_pred cHHHHHHHhccCcCHHHHHHHHHHHHHHhcCCHhHHHHHHhccHHHHHHHHhcCCCHHHHHHHHHHHHHHHCCCHHHHHH
2112 Confidence 4455566665543 778888899998887554443333444567778888887777888899999999887653333333
2113
2114
2115 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
2116 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
2117 +...+.+..++..+....++.++..++.++..++........... ++++.|..++... ++++-
2118 T Consensus 126 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~ 189 (456)
2119 T 4BQK_A 126 VLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSN----------------DEEVL 189 (456)
2120 T ss_dssp HHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCC----------------CHHHH
2121 T ss_pred HHHCCcHHHHHHHHhhCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhcCC----------------CHHHH
2122 Confidence 333455666666665334567888888888888775433222222 5666666666431 23333
2123
2124
2125 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
2126 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
2127 ..+..++..-.. ..+ ..++.. .-.+++..|...+.. .+..-...+...|.++.
2128 T Consensus 190 ~~a~~~l~~l~~------~~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 242 (456)
2129 T 4BQK_A 190 TDACWALSYLSD------GTN--------------DKIQAV-IEAGVCPRLVELLLH------PSPSVLIPALRTVGNIV 242 (456)
2130 T ss_dssp HHHHHHHHHHTS------SSH--------------HHHHHH-HHTTCHHHHHHHTTC------SCHHHHHHHHHHHHHHT
2131 T ss_pred HHHHHHHHHHhc------CCh--------------HHHHHH-HHCChHHHHHHHHhC------CCHHHHHHHHHHHHHHH
2132 Confidence 333333322110 000 000000 012334444333321 11111222222222222
2133
2134
2135 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
2136 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
2137 ..- ......+.+.++++.++.++....++.
2138 T Consensus 243 ~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~~~~~~~ 272 (456)
2139 T 4BQK_A 243 TGD--------------------------------------------------DAQTQCIIDHQALPCLLSLLTQNLKKS 272 (456)
2140 T ss_dssp TSC--------------------------------------------------HHHHHHHHTTTHHHHHHHHHHSCCCHH
2141 T ss_pred cCC--------------------------------------------------HHHHHHHHHCChHHHHHHHHHcCCCHH
2142 Confidence 100 000112244567888888887322677
2143
2144
2145 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGNQVFPEV 640 (747)
2146 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~giI~~L 640 (747)
2147 ++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. ... ..+...++++.+
2148 T Consensus 273 ~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l 347 (456)
2149 T 4BQK_A 273 IKKEACWTISNITAGNKD-----QIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPL 347 (456)
2150 T ss_dssp HHHHHHHHHHHHHTSCHH-----HHHHHHHHTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHH
2151 T ss_pred HHHHHHHHHHHHhcCCHH-----HHHHHHHCCcHHHHHHHhhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHH
2152 Confidence 888999999999865332 233334567888899999888888999999999999875 222 233344677888
2153
2154
2155 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL-----------AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLS 709 (747)
2156 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~-----------~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLs 709 (747)
2157 ..++.+ .++.++..++.+|.+++...+.. ...+.+.+.++.+..++.+. ++.++..++.+|.
2158 T Consensus 348 ~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a~~~l~ 420 (456)
2159 T 4BQK_A 348 CDLLIC------PDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHD-NNEIYEKAVKILE 420 (456)
2160 T ss_dssp HHGGGS------SCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHH
2161 T ss_pred HHHhhC------CChHHHHHHHHHHHHHHHHhhhchhccCCCCCHHHHHHHHcchHHHHHHHHcCC-CHHHHHHHHHHHH
2162 Confidence 888776 36788899999999998753321 11122245677788888766 7889999999999
2163
2164
2165 Q NP_000290.2 710 DMWSSKE 716 (747)
2166 Q Consensus 710 nL~~~~~ 716 (747)
2167 +++...+
2168 T Consensus 421 ~l~~~~~ 427 (456)
2169 T 4BQK_A 421 AYWMDEE 427 (456)
2170 T ss_dssp HHCC---
2171 T ss_pred HHhcCcc
2172 Confidence 9887544
2173
2174
2175 No 27
2176 >6BW9_A Importin subunit alpha-3, Protein W; Complex, Hendra virus, Importin, Karyopherin; 1.6A {Homo sapiens}
2177 Probab=98.31 E-value=1.3e-10 Score=118.46 Aligned_cols=366 Identities=17% Similarity=0.199 Sum_probs=218.4 Template_Neff=12.900
2178
2179 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2180 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
2181 +++.+...+. ..++.++..++.++..++.........+...++++.+...+.+.+..++..++.++..++.........
2182 T Consensus 53 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 132 (459)
2183 T 6BW9_A 53 ILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDY 132 (459)
2184 T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTCHHHHHH
2185 T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHhhCCHHHHHHHHhcCCChHHHHHHHHHHHHHHcCCHHHHHH
2186 Confidence 4555666665 456778888899998887654433333344567778888887777888999999999887654333333
2187
2188
2189 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEEL-I-ADALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
2190 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~L-v-egiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
2191 +...+++..+...+....+..++..++.++..++......... . .++++.+..++.. .++++
2192 T Consensus 133 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~v 196 (459)
2193 T 6BW9_A 133 VISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHH----------------TDVNI 196 (459)
2194 T ss_dssp HHHTTCHHHHHHTCSTTSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTC----------------CCHHH
2195 T ss_pred HHHCCcHHHHHhccCCCCCHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhc----------------CCHHH
2196 Confidence 3334566777777653345567888888888887643321111 1 1566666666543 13344
2197
2198
2199 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
2200 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
2201 ...+..++..-... .+ ...... -..+++..|...++. .+..-...++..|.++
2202 T Consensus 197 ~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l 249 (459)
2203 T 6BW9_A 197 LVDTVWALSYLTDA------GN--------------EQIQMV-IDSGIVPHLVPLLSH------QEVKVQTAALRAVGNI 249 (459)
2204 T ss_dssp HHHHHHHHHHHHTS------CH--------------HHHHHH-HHTTCHHHHGGGGGC------SSHHHHHHHHHHHHHH
2205 T ss_pred HHHHHHHHHHHhhc------Ch--------------HHHHHH-HhCChHHHHHHHcCC------CCHHHHHHHHHHHHHH
2206 Confidence 44444333221100 00 000000 012334444333321 1111122223333333
2207
2208
2209 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
2210 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
2211 ....+ .....+.+.++++.++.++. +.++
2212 T Consensus 250 ~~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~~~ 278 (459)
2213 T 6BW9_A 250 VTGTD--------------------------------------------------EQTQVVLNCDALSHFPALLT-HPKE 278 (459)
2214 T ss_dssp TTSCH--------------------------------------------------HHHHHHHTTTGGGGCHHHHT-CSCH
2215 T ss_pred HcCCH--------------------------------------------------HHHHHHhcccchhcHHHHhh-CCCH
2216 Confidence 21100 00111234467788888887 4677
2217
2218
2219 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGNQVFPE 639 (747)
2220 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~giI~~ 639 (747)
2221 .++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ......++++.
2222 T Consensus 279 ~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~ 353 (459)
2223 T 6BW9_A 279 KINKEAVWFLSNITAGNQQ-----QVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPP 353 (459)
2224 T ss_dssp HHHHHHHHHHHHHHTSCHH-----HHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHH
2225 T ss_pred HHHHHHHHHHHHHcCCCHH-----HHHHHHHCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHCCcHHH
2226 Confidence 8888999999999865332 223334557888888888888888999999999999864 2 21 23334467788
2227
2228
2229 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA----KQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
2230 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~----~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
2231 +..++.+ .++.++..++.+|.+++...+... ..+...++++.+..++.+. ++.++..++.+|.+++...
2232 T Consensus 354 l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~~ 426 (459)
2233 T 6BW9_A 354 FCNLLTV------KDAQVVQVVLDGLSNILKMAEDEAETIGNLIEECGGLEKIEQLQNHE-NEDIYKLAYEIIDQFFSSD 426 (459)
2234 T ss_dssp HHGGGGC------SCHHHHHHHHHHHHHHHHHCTTTHHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHSCC-
2235 T ss_pred HHHhcCC------CCHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHcCHHHHHHHHhcCC-CHHHHHHHHHHHHHHcCCC
2236 Confidence 8888776 367888999999999987533221 1233346778888888766 7889999999999998766
2237
2238
2239 Q NP_000290.2 716 EL 717 (747)
2240 Q Consensus 716 ~~ 717 (747)
2241 +.
2242 T Consensus 427 ~~ 428 (459)
2243 T 6BW9_A 427 DI 428 (459)
2244 T ss_dssp --
2245 T ss_pred CC
2246 Confidence 54
2247
2248
2249 No 28
2250 >1WA5_B GTP-BINDING NUCLEAR PROTEIN RAN, IMPORTIN; NUCLEAR TRANSPORT-COMPLEX, NUCLEAR TRANSPORT, EXPORTIN; HET: GTP; 2.0A {CANIS FAMILIARIS} SCOP: a.118.1.1
2251 Probab=98.27 E-value=1.9e-10 Score=121.37 Aligned_cols=134 Identities=13% Similarity=0.098 Sum_probs=85.4 Template_Neff=12.300
2252
2253 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2254 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
2255 .+++.+...+.+.++.++..++.++.+++...+.....+...++++.+..++.+.+..++..++.++..++.........
2256 T Consensus 173 ~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 252 (530)
2257 T 1WA5_B 173 DAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDW 252 (530)
2258 T ss_dssp TCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCH
2259 T ss_pred ChHHHHHHHHhCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHhhCCCHHHHHHHHHHHHHHHCCCCCCCCH
2260 Confidence 34556666676777888899999999988654433334444567778888887777888888999998887644222222
2261
2262
2263 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRV 379 (747)
2264 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL 379 (747)
2265 ....++++.+..++. ..++.++..++.++..++.... ....+.. ++++.|+.++
2266 T Consensus 253 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l 308 (530)
2267 T 1WA5_B 253 SVVSQALPTLAKLIY-SMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELL 308 (530)
2268 T ss_dssp HHHGGGHHHHHHHTT-CCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGG
2269 T ss_pred HHHhhHHHHHHHHHh-cCCHHHHHHHHHHHHHHcCCCHHHHHHHHhCCHHHHHHHHh
2270 Confidence 223456666777765 4566777778888887776422 2222222 4455555544
2271
2272
2273 No 29
2274 >5XGC_A Rap1 GTPase-GDP dissociation stimulator 1; armadillo GEF, ONCOPROTEIN; 2.1A {Homo sapiens}
2275 Probab=98.27 E-value=2e-10 Score=117.66 Aligned_cols=409 Identities=17% Similarity=0.214 Sum_probs=224.4 Template_Neff=13.200
2276
2277 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS--PNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
2278 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s--~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
2279 +++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.. .++.++..++.++..++.... ...
2280 T Consensus 35 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~-~~~ 113 (503)
2281 T 5XGC_A 35 LISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLGIHCQNAALTEMCLVAFGNLAELES-SKE 113 (503)
2282 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHSCCCSHHHHHHHHHTTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTSHH-HHH
2283 T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCchHHHHHHHCChHHHHHHHHhccCCCHHHHHHHHHHHHHHHccHH-HHH
2284 Confidence 55666777777778889999999999887543333344445677788888776 467888889999988876532 222
2285
2286
2287 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
2288 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
2289 .+...++++.+...+....++.++..++.++..++........+.. ++++.++.++....... + ....+.
2290 T Consensus 114 ~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~--------~-~~~~~~ 184 (503)
2291 T 5XGC_A 114 QFASTNIAEELVKLFKKQIEHDKREMIFEVLAPLAENDAIKLQLVEAGLVECLLEIVQQKVDSD--------K-EDDITE 184 (503)
2292 T ss_dssp HHTTTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHHHHTTCC--------C-HHHHHH
2293 T ss_pred HHhcCCHHHHHHHHHHhcCChhHHHHHHHHHHHHHcCHHHHHHHHHCCHHHHHHHHHHhcCCCC--------C-HHHHHH
2294 Confidence 2334466777777776222677888899999998876444444444 67777777776432100 0 000000
2295
2296
2297 Q NP_000290.2 403 FFNATGCLRKRL----------------GMRELLALVPQR-------ATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQ 459 (747)
2298 Q Consensus 403 ~~~~~~~~~~~~----------------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (747)
2299 +..+...+..-. -+..++.+.... +...-.+++..+..+..+.. .|.++.|+..+.
2300 T Consensus 185 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~-~~~~~~l~~~l~ 263 (503)
2301 T 5XGC_A 185 LKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALAIANFARNDANCIHMVD-NGIVEKLMDLLD 263 (503)
2302 T ss_dssp HHHHHHHHHHHTTSHHHHHHHHGGGTCHHHHHHHHHTTSSCHHHHHHHHHHHHHHCSSHHHHHHHHH-TTHHHHHHHHHH
2303 T ss_pred HHHHHHHHHHHHhCCchHHHHHhcCcccHHHHHHHHccCCCHHHHHHHHHHHHHHHCChhHHHHHHH-CCHHHHHHHHHH
2304 Confidence 000000000000 000111110000 00000011111111110000 011222221111
2305
2306
2307 Q NP_000290.2 460 NCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKG 539 (747)
2308 Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~ 539 (747)
2309 .... .-+..-...++.+|.++. .. . ..
2310 T Consensus 264 ~~~~--~~~~~~~~~a~~~l~~l~-----------------------------------~~---------------~-~~ 290 (503)
2311 T 5XGC_A 264 RHVE--DGNVTVQHAALSALRNLA-----------------------------------IP---------------V-IN 290 (503)
2312 T ss_dssp TTTT--TCCHHHHHHHHHHHHHHT-----------------------------------CS---------------H-HH
2313 T ss_pred hccc--cCCHHHHHHHHHHHHHhc-----------------------------------CC---------------H-HH
2314 Confidence 1000 000000011111111111 00 0 01
2315
2316
2317 Q NP_000290.2 540 SGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS-DVVRSGASL 618 (747)
2318 Q Consensus 540 ~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~-eVr~~AL~a 618 (747)
2319 ...+.+.++++.|..++. +.++.++..++.+|.+++...+. . ........++++.+..++.+.+. .++..++++
2320 T Consensus 291 ~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~---~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~ 365 (503)
2321 T 5XGC_A 291 KAKMLSAGVTEAVLKFLK-SEMPPVQFKLLGTLRMLIDAQAE---A-AEQLGKNVKLVERLVEWCEAKDHAGVMGESNRL 365 (503)
2322 T ss_dssp HHHHHHHTHHHHHHTTTT-CCCHHHHHHHHHHHHHHTTTCHH---H-HHHHHTCHHHHHHHHHHHTCTTCHHHHHHHHHH
2323 T ss_pred HHHHHHcCHHHHHHHHHc-CCCHHHHHHHHHHHHHHHccCHH---H-HHHHccccchHHHHHHHHccCCccchHHHHHHH
2324 Confidence 122345678888888888 46778888999999999875332 0 11221235678888888877665 888999999
2325
2326
2327 Q NP_000290.2 619 LSNMSRHPL---L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCR 693 (747)
2328 Q Consensus 619 LsnLa~~~e---~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~ 693 (747)
2329 |.+++.... . ..+...++++.+..++.+ .++.++..++.+|.+++...+ .....+...++++.+...+.
2330 T Consensus 366 l~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 439 (503)
2331 T 5XGC_A 366 LSALIRHSKSKDVIKTIVQSGGIKHLVTMATS------EHVIMQNEALVALALIAALELGTAEKDLESAKLVQILHRLLA 439 (503)
2332 T ss_dssp HHHHHHHHCCHHHHHHHHHHTHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHC--
2333 T ss_pred HHHHHHHccChhHHHHHHhcChHHHHHHHhcC------CCHHHHHHHHHHHHHHHhCCCCcHHHHHHhccHHHHHHHHHh
2334 Confidence 999976522 2 233455677888888876 367889999999999987542 22333444457888888887
2335
2336
2337 Q NP_000290.2 694 SS-ASPKAAEAARLLLSDMWSSKELQGVLRQQGFDRN 729 (747)
2338 Q Consensus 694 s~-~d~eVr~aAL~aLsnL~~~~~~~~~~~~~~~~~~ 729 (747)
2339 .. .++.++..++.+|.+++...+....+...|+..-
2340 T Consensus 440 ~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~ 476 (503)
2341 T 5XGC_A 440 DERSAPEIKYNSMVLICALMGSECLHKEVQDLAFLDV 476 (503)
2342 T ss_dssp -----CGGGGHHHHHHHHHTTCSSCCCSGGGTHHHHH
2343 T ss_pred CCCCcHHHHHHHHHHHHHHhCCHHHHHHHHHhcHHHH
2344 Confidence 32 1578899999999999988776666655555443
2345
2346
2347 No 30
2348 >4BPL_A IMPORTIN SUBUNIT ALPHA-1A, NUCLEOPLASMIN NLS; TRANSPORT PROTEIN, NUCLEAR IMPORT, NUCLEAR; 2.3A {ORYZA SATIVA}
2349 Probab=98.24 E-value=2.4e-10 Score=115.88 Aligned_cols=367 Identities=17% Similarity=0.164 Sum_probs=216.2 Template_Neff=13.000
2350
2351 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2352 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
2353 +++.+...+...+ +.++..++.++..++.........+...++++.+..++.+.++.++..++.++..++.........
2354 T Consensus 44 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 123 (454)
2355 T 4BPL_A 44 VVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDL 123 (454)
2356 T ss_dssp CHHHHHHHHSCTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHSCHHHHHH
2357 T ss_pred cHHHHHHHhccCcCHHHHHHHHHHHHHHhcCChhhhHHHhhccHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
2358 Confidence 4455566665543 778888889998887544433333444567778888887777888999999999887653333333
2359
2360
2361 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
2362 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
2363 +...+.+..++..+....++.++..++.++..++........... ++++.|..++.. -++++.
2364 T Consensus 124 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~~ 187 (454)
2365 T 4BPL_A 124 VLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHS----------------NDEEVL 187 (454)
2366 T ss_dssp HHHTTCHHHHHHTCSTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTC----------------CCHHHH
2367 T ss_pred HHHCCcHHHHHHHHccCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHhC----------------CCHHHH
2368 Confidence 333455666666665334567888888888888765433222222 566666666542 123444
2369
2370
2371 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
2372 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
2373 ..+..++..-... .+ ..++.. -..+++..|...++. .+..-...+...|.++.
2374 T Consensus 188 ~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 240 (454)
2375 T 4BPL_A 188 TDACWALSYLSDG------TN--------------DKIQAV-IEAGVCPRLVELLLH------PSPSVLIPALRTVGNIV 240 (454)
2376 T ss_dssp HHHHHHHHHHTSS------CH--------------HHHHHH-HHTTCHHHHHHHTTC------SCHHHHHHHHHHHHHHT
2377 T ss_pred HHHHHHHHHHhcC------Ch--------------HHHHHH-HHCCcHHHHHHHhhC------CChHHHHHHHHHHHHHh
2378 Confidence 4444333221100 00 000000 012334444333321 01111122222222221
2379
2380
2381 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
2382 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
2383 .. +......+.+.++++.++.++....++.
2384 T Consensus 241 ~~--------------------------------------------------~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 270 (454)
2385 T 4BPL_A 241 TG--------------------------------------------------DDAQTQCIIDHQALPCLLSLLTQNLKKS 270 (454)
2386 T ss_dssp TS--------------------------------------------------CHHHHHHHHTTTHHHHHHHHHHSSCCHH
2387 T ss_pred cC--------------------------------------------------CHHHHHHHHHCChHHHHHHHHHhcCCHH
2388 Confidence 10 0001112234567888888887322677
2389
2390
2391 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGNQVFPEV 640 (747)
2392 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~giI~~L 640 (747)
2393 ++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++.. ... ..+...++++.+
2394 T Consensus 271 ~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l 345 (454)
2395 T 4BPL_A 271 IKKEACWTISNITAGNKD-----QIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPL 345 (454)
2396 T ss_dssp HHHHHHHHHHHHHTSCHH-----HHHHHHHHTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHH
2397 T ss_pred HHHHHHHHHHHHhcCCHH-----HHHHHHhCCcHHHHHHHhhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHH
2398 Confidence 888999999999865332 233334567888899999888888999999999999875 222 233444677888
2399
2400
2401 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA-----------KQYFSSSMLNNIINLCRSSASPKAAEAARLLLS 709 (747)
2402 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~-----------~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLs 709 (747)
2403 ..++.+ .++.++..++.+|.+++....... ..+.+.+.++.+..++.+. ++.++..++.+|.
2404 T Consensus 346 ~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~ 418 (454)
2405 T 4BPL_A 346 CDLLIC------PDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHD-NNEIYEKAVKILE 418 (454)
2406 T ss_dssp HHTTTC------SCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHHH
2407 T ss_pred HHHhcC------CChHHHHHHHHHHHHHHHHhhhchhcccCCCCHHHHHHHHcccHHHHHHHHcCC-CHHHHHHHHHHHH
2408 Confidence 888776 367888899999999987532211 1112245677788888766 7889999999999
2409
2410
2411 Q NP_000290.2 710 DMWSSKEL 717 (747)
2412 Q Consensus 710 nL~~~~~~ 717 (747)
2413 .+....+.
2414 T Consensus 419 ~l~~~~~~ 426 (454)
2415 T 4BPL_A 419 AYWMDEED 426 (454)
2416 T ss_dssp HHCC----
2417 T ss_pred HHhcCccc
2418 Confidence 99876544
2419
2420
2421 No 31
2422 >4B8J_A IMPORTIN SUBUNIT ALPHA-1A; TRANSPORT PROTEIN, NUCLEAR LOCALIZATION SIGNAL; 2.001A {ORYZA SATIVA JAPONICA GROUP}
2423 Probab=98.24 E-value=2.6e-10 Score=119.98 Aligned_cols=367 Identities=17% Similarity=0.160 Sum_probs=217.7 Template_Neff=12.400
2424
2425 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2426 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
2427 +++.+...+.+.+ +.++..++.+|..++.........+...++++.+..++.+.+..++..++.+|..++.........
2428 T Consensus 118 ~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 197 (528)
2429 T 4B8J_A 118 VVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDL 197 (528)
2430 T ss_dssp CHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHH
2431 T ss_pred cHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCChHHHHHHHhCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
2432 Confidence 4555666665544 778888999998887544433333444557778888887777888899999999887654333333
2433
2434
2435 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
2436 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
2437 +...+++..++..+....++.++..++.++..++........... ++++.|..++.. .++++.
2438 T Consensus 198 ~~~~~~l~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~v~ 261 (528)
2439 T 4B8J_A 198 VLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHS----------------NDEEVL 261 (528)
2440 T ss_dssp HHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTC----------------CCHHHH
2441 T ss_pred HHHCCcHHHHHHHHccCCCHHHHHHHHHHHHHHhCCCCCCCHHHHhhHHHHHHHHhcC----------------CCHHHH
2442 Confidence 333455666666664334567888888999888875433222222 566666666643 133444
2443
2444
2445 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
2446 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
2447 ..+..+|..-.. ..+ ...+.+ ...++++.|+..++. .+..-...+...|.++.
2448 T Consensus 262 ~~a~~~l~~l~~------~~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 314 (528)
2449 T 4B8J_A 262 TDACWALSYLSD------GTN--------------DKIQAV-IEAGVCPRLVELLLH------PSPSVLIPALRTVGNIV 314 (528)
2450 T ss_dssp HHHHHHHHHHTS------SCH--------------HHHHHH-HHTTCHHHHHHHTTC------SCHHHHHHHHHHHHHHT
2451 T ss_pred HHHHHHHHHHhc------CCh--------------HHHHHH-HHCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHH
2452 Confidence 444443322110 000 000000 012344444433321 01111122222222222
2453
2454
2455 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
2456 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
2457 ..- ......+.+.++++.|+.++....++.
2458 T Consensus 315 ~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~~~~~~~ 344 (528)
2459 T 4B8J_A 315 TGD--------------------------------------------------DAQTQCIIDHQALPCLLSLLTQNLKKS 344 (528)
2460 T ss_dssp TSC--------------------------------------------------HHHHHHHHTTTHHHHHHHHHHSCCCHH
2461 T ss_pred cCC--------------------------------------------------HHHHHHHHHCChHHHHHHHHhcCCCHH
2462 Confidence 100 001112245567888888887322677
2463
2464
2465 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGNQVFPEV 640 (747)
2466 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~giI~~L 640 (747)
2467 ++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...++++.|
2468 T Consensus 345 v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l 419 (528)
2469 T 4B8J_A 345 IKKEACWTISNITAGNKD-----QIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPL 419 (528)
2470 T ss_dssp HHHHHHHHHHHHHTSCHH-----HHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHH
2471 T ss_pred HHHHHHHHHHHHHcCCHH-----HHHHHHHCCchHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHH
2472 Confidence 888999999999865332 233334567888999999888888999999999999875 2 22 233344677888
2473
2474
2475 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL-----------AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLS 709 (747)
2476 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~-----------~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLs 709 (747)
2477 ..++.+ .++.++..++.+|.+++...... ...+.+.++++.|..++.+. ++.++..|+.+|.
2478 T Consensus 420 ~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a~~~l~ 492 (528)
2479 T 4B8J_A 420 CDLLIC------PDIRIVTVCLEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIENLQSHD-NNEIYEKAVKILE 492 (528)
2480 T ss_dssp HHGGGC------SCHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHHGGGCS-SHHHHHHHHHHHH
2481 T ss_pred HHHccC------CCHHHHHHHHHHHHHHHHHhHHcHhhcCCCCcHHHHHHHHcCHHHHHHHHhcCC-CHHHHHHHHHHHH
2482 Confidence 888776 36788899999999998753221 11122345677788888766 7889999999999
2483
2484
2485 Q NP_000290.2 710 DMWSSKEL 717 (747)
2486 Q Consensus 710 nL~~~~~~ 717 (747)
2487 +++...+.
2488 T Consensus 493 ~l~~~~~~ 500 (528)
2489 T 4B8J_A 493 AYWMDEED 500 (528)
2490 T ss_dssp HHCC----
2491 T ss_pred Hhcccccc
2492 Confidence 98875544
2493
2494
2495 No 32
2496 >5T94_B Guanine nucleotide exchange factor SRM1; Nuclear Import, Importin alpha, RCC1; 2.631A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
2497 Probab=98.23 E-value=2.9e-10 Score=120.53 Aligned_cols=364 Identities=15% Similarity=0.171 Sum_probs=219.0 Template_Neff=12.200
2498
2499 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2500 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
2501 +++.++..+.+.+ +.++..++.+|..++.........+...++++.+...+.+.++.++..++.++..++.........
2502 T Consensus 131 ~~~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 210 (542)
2503 T 5T94_B 131 VVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDY 210 (542)
2504 T ss_dssp CHHHHHHTTSSSSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCHHHHHH
2505 T ss_pred hHHHHHHHhhcCCCHHHHHHHHHHHHHHHcCChHHHHHHhcCChHHHHHHHHhCCCHHHHHHHHHHHHHHHCCCHHHHHH
2506 Confidence 4555666665443 677888899998887654333333334567777888887777888999999999988654433333
2507
2508
2509 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
2510 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
2511 +...++++.+..++. ..++.++..++.+|..++.... ....... ++++.|+.++.. .++++
2512 T Consensus 211 ~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~ 273 (542)
2513 T 5T94_B 211 VLQCNAMEPILGLFN-SNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYS----------------MDTET 273 (542)
2514 T ss_dssp HHHTTCHHHHHHGGG-CCCHHHHHHHHHHHHHHSCCSTTCCCHHHHGGGHHHHHHHTTC----------------CCHHH
2515 T ss_pred HHHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCCCCCCHHHHhcHHHHHHHHHhc----------------CCHHH
2516 Confidence 344467777777776 5567788889999998887542 2222222 566777766642 12334
2517
2518
2519 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
2520 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
2521 ...+..+|..-... -+ ...+.+. -.+++..|...++. .+..-...+...|.++
2522 T Consensus 274 ~~~a~~~L~~l~~~------~~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l 326 (542)
2523 T 5T94_B 274 LVDACWAISYLSDG------PQ--------------EAIQAVI-DVRIPKRLVELLSH------ESTLVQTPALRAVGNI 326 (542)
2524 T ss_dssp HHHHHHHHHHHSSS------SH--------------HHHHHHH-HTTCHHHHHHTTSC------SSHHHHHHHHHHHHHH
2525 T ss_pred HHHHHHHHHHHcCC------CH--------------HHHHHHH-hCCHHHHHHHHhcC------CCHHHHHHHHHHHHHH
2526 Confidence 33333333221100 00 0000000 01233333322221 1111112222222222
2527
2528
2529 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
2530 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
2531 ...- ......+.+.++++.|+.++. +.++
2532 T Consensus 327 ~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~ 355 (542)
2533 T 5T94_B 327 VTGN--------------------------------------------------DLQTQVVINAGVLPALRLLLS-SPKE 355 (542)
2534 T ss_dssp TTSC--------------------------------------------------HHHHHHHHHTTHHHHHHHHTT-CSSH
2535 T ss_pred HcCC--------------------------------------------------HHHHHHHHHCChHHHHHHHhh-CCCH
2536 Confidence 2100 001111234567888888887 4677
2537
2538
2539 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL----L-HRVMGNQVF 637 (747)
2540 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e----~-~~ll~~giI 637 (747)
2541 .++..++++|.+++...+. ....+...++++.|..++.+.++.++..++++|.+++.... . ..+...+++
2542 T Consensus 356 ~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~ 430 (542)
2543 T 5T94_B 356 NIKKEACWTISNITAGNTE-----QIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCI 430 (542)
2544 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHGGGTTCTHHHHHHHHTTCH
2545 T ss_pred HHHHHHHHHHHHHhCCCHH-----HHHHHHHCCchHHHHHHHHcCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHCCCH
2546 Confidence 8888999999999875332 23333456788888888888888899999999999987621 1 223345678
2547
2548
2549 Q NP_000290.2 638 PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-----------LAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
2550 Q Consensus 638 ~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-----------~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
2551 +.|..++.+ .++.++..++.+|.+++...+. ....+.+.++++.|..++.+. ++.++..|+.
2552 T Consensus 431 ~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~-~~~v~~~a~~ 503 (542)
2553 T 5T94_B 431 KPLCDLLEI------ADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNE-NDKIYEKAYK 503 (542)
2554 T ss_dssp HHHHHHHHH------CCHHHHHHHHHHHHHHHHHHHHHTTTTTCSSCTTTHHHHHTTCHHHHHTTSSSC-CHHHHHHHHH
2555 T ss_pred HHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHH
2556 Confidence 888888876 3677888999999999875332 123344456788888888766 7889999999
2557
2558
2559 Q NP_000290.2 707 LLSDMWSSKE 716 (747)
2560 Q Consensus 707 aLsnL~~~~~ 716 (747)
2561 +|.+++...+
2562 T Consensus 504 ~l~~l~~~~~ 513 (542)
2563 T 5T94_B 504 IIETYFGEEE 513 (542)
2564 T ss_dssp HHHHHC----
2565 T ss_pred HHHHHhCcCc
2566 Confidence 9999987543
2567
2568
2569 No 33
2570 >4TNM_A Importin-alpha3 / MOS6; armadillo repeat; 2.9A {Arabidopsis thaliana}
2571 Probab=98.21 E-value=3.2e-10 Score=119.57 Aligned_cols=369 Identities=17% Similarity=0.184 Sum_probs=220.4 Template_Neff=12.300
2572
2573 Q NP_000290.2 246 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2574 Q Consensus 246 iL~~Ll~lL~ssd-~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
2575 +++.+...+.+.+ +.++..++.++..++.........+...++++.+..++.+.++.++..++.++..++.........
2576 T Consensus 119 ~~~~l~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 198 (531)
2577 T 4TNM_A 119 VVPRVVKFLSRDDFPKLQFEAAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQAVWALGNVAGDSPKCRDL 198 (531)
2578 T ss_pred CHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHccCCCHHHHHHHHHHHHHHhcCCHHHHHH
2579 Confidence 4555666665544 778888889998887644333333444567778888887777888999999999887653333333
2580
2581
2582 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
2583 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
2584 +...+++..+...+....+..++..++.++..++........... ++++.|..++... ++++.
2585 T Consensus 199 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v~ 262 (531)
2586 T 4TNM_A 199 VLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKPPPAFEQTQPALPVLERLVQSM----------------DEEVL 262 (531)
2587 T ss_pred HHHCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCCCCcchhhhcchHHHHHHHhcCC----------------CHHHH
2588 Confidence 333456666666664334567888888898888765433222222 5666666665431 33444
2589
2590
2591 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
2592 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
2593 ..+..+|..-.. .+......-.-.+++..|...+.. .+..-...+...|.++.
2594 T Consensus 263 ~~a~~~l~~l~~---------------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l~ 315 (531)
2595 T 4TNM_A 263 TDACWALSYLSD---------------------NSNDKIQAVIEAGVVPRLIQLLGH------SSPSVLIPALRTIGNIV 315 (531)
2596 T ss_pred HHHHHHHHHHhC---------------------CCHHHHHHHHHCChHHHHHHHHhC------CCHHHHHHHHHHHHHHH
2597 Confidence 444433322110 000000000012334444333321 11112222233333322
2598
2599
2600 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
2601 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
2602 ...+ .....+.+.++++.|+.++....++.
2603 T Consensus 316 ~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~~~~~~~ 345 (531)
2604 T 4TNM_A 316 TGDD--------------------------------------------------LQTQMVLDQQALPCLLNLLKNNYKKS 345 (531)
2605 T ss_pred CCCH--------------------------------------------------HHHHHHHHCCcHHHHHHHhcCCCCHH
2606 Confidence 1100 00111234467788888887323567
2607
2608
2609 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PL-L-HRVMGNQVFPEV 640 (747)
2610 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e-~-~~ll~~giI~~L 640 (747)
2611 ++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++++|.+++.. .. . ..+...++++.|
2612 T Consensus 346 v~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l 420 (531)
2613 T 4TNM_A 346 IKKEACWTISNITAGNAD-----QIQAVIDAGIIQSLVWVLQSAEFEVKKEAAWGISNATSGGTHDQIKFMVSQGCIKPL 420 (531)
2614 T ss_pred HHHHHHHHHHHHHCCCHH-----HHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCcHHHH
2615 Confidence 888999999999875332 233334566888888888887888999999999999875 21 2 233344677888
2616
2617
2618 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQ------------PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
2619 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s------------~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
2620 ..++.+ .++.++..++.+|.+++... ......+.+.++++.|..++.+. ++.++..|+.+|
2621 T Consensus 421 ~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a~~~l 493 (531)
2622 T 4TNM_A 421 CDLLTC------PDLKVVTVCLEALENILVVGEAEKNLGHTGEDNLYAQMIDEAEGLEKIENLQSHD-NNDIYDKAVKIL 493 (531)
2623 T ss_pred HHHccC------CCHHHHHHHHHHHHHHHhhCccchhhcCCCCcHHHHHHHHHCCcHHHHHHHhcCC-CHHHHHHHHHHH
2624 Confidence 888776 36788899999999998531 11223334446788888888776 788999999999
2625
2626
2627 Q NP_000290.2 709 SDMWSSKELQG 719 (747)
2628 Q Consensus 709 snL~~~~~~~~ 719 (747)
2629 .+++...+...
2630 T Consensus 494 ~~l~~~~~~~~ 504 (531)
2631 T 4TNM_A 494 ETFWTEDNEEE 504 (531)
2632 T ss_pred HHHhcCCCCcc
2633 Confidence 99987655443
2634
2635
2636 No 34
2637 >5TBK_C Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
2638 Probab=98.21 E-value=3.4e-10 Score=119.34 Aligned_cols=366 Identities=16% Similarity=0.161 Sum_probs=222.2 Template_Neff=12.200
2639
2640 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESA-KQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNK 322 (747)
2641 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~-~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
2642 .+++.+...+.+.++.++..++.+|..++...... ...+...++++.+...+... +..++..++.++..++.......
2643 T Consensus 71 ~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~ 150 (521)
2644 T 5TBK_C 71 TSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQT 150 (521)
2645 T ss_dssp CCSSTHHHHTTSSCHHHHHHHHHHHHHHHHTTTCCCTTSCTTTTHHHHHHHHHHCCSCHHHHHHHHHHHHHHHTSCHHHH
2646 T ss_pred hcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCCCCCHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHH
2647 Confidence 35566677777777788888999998887643221 12233346677777777643 67788888999988876543333
2648
2649
2650 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDP 400 (747)
2651 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~ 400 (747)
2652 ..+...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|+.++... .++
2653 T Consensus 151 ~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~~ 214 (521)
2654 T 5TBK_C 151 QAVVQSNAVPLFLRLLH-SPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS---------------IPI 214 (521)
2655 T ss_dssp HHHHTTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCHHHHHTTCCTT---------------SCH
2656 T ss_pred HHHHHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhCCC---------------CCH
2657 Confidence 33334457777777776 5567888899999999886432 2222333 6677777766532 123
2658
2659
2660 Q NP_000290.2 401 EVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
2661 Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
2662 ++...+..+|..-. .............+++..|...+.. .+..-...+..+|.
2663 T Consensus 215 ~~~~~a~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~ 267 (521)
2664 T 5TBK_C 215 TFLRNVTWVMVNLC---------------------RHKDPPPPMETIQEILPALCVLIHH------TDVNILVDTVWALS 267 (521)
2665 T ss_dssp HHHHHHHHHHHHHH---------------------CCCSSCCCHHHHHHHHHHHHHHTTC------SCHHHHHHHHHHHH
2666 T ss_pred HHHHHHHHHHHHHH---------------------cCCCCCCCHHHHHHHHHHHHHHhhC------CCHHHHHHHHHHHH
2667 Confidence 33333433332211 0000001111122333333333221 11222223333333
2668
2669
2670 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
2671 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
2672 ++...-+ .....+.+.++++.++.++. +.
2673 T Consensus 268 ~l~~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~ 296 (521)
2674 T 5TBK_C 268 YLTDAGN--------------------------------------------------EQIQMVIDSGIVPHLVPLLS-HQ 296 (521)
2675 T ss_dssp HHHHHCH--------------------------------------------------HHHHHHHHTTCHHHHGGGGG-CS
2676 T ss_pred HHhccCh--------------------------------------------------HHHHHHHHCChHHHHHHHhc-CC
2677 Confidence 3321100 01112234567788888887 46
2678
2679
2680 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFP 638 (747)
2681 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~ 638 (747)
2682 ++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++++|.+++... .. ..+...++++
2683 T Consensus 297 ~~~v~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~ 371 (521)
2684 T 5TBK_C 297 EVKVQTAALRAVGNIVTGTDE-----QTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVP 371 (521)
2685 T ss_dssp SHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTCGGGHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTCHH
2686 T ss_pred CHHHHHHHHHHHHHHHcCCHH-----HHHHHHhCCHHHhHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHH
2687 Confidence 677888899999998875332 2233344578888888888888889999999999998762 22 2334456778
2688
2689
2690 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
2691 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
2692 .|..++.+ .++.++..++.+|.+++.... .....+.+.++++.|..++.+. ++.++..++.+|.+++...+
2693 T Consensus 372 ~l~~~l~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~~~~L~~~l~~~-~~~v~~~a~~~l~~l~~~~~ 443 (521)
2694 T 5TBK_C 372 MIIHLLDK------GDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVK-DAQVVQVVLDGLSNILKMAE 443 (521)
2695 T ss_dssp HHHHHHHH------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTTCHHHHHGGGGSS-CHHHHHHHHHHHHHHHHHCS
2696 T ss_pred HHHHHHHh------CCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHhH
2697 Confidence 88888776 367788999999999985322 2233344456788888888766 77888999999999887543
2698
2699
2700 No 35
2701 >5TBK_D Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
2702 Probab=98.21 E-value=3.4e-10 Score=119.34 Aligned_cols=366 Identities=16% Similarity=0.161 Sum_probs=221.8 Template_Neff=12.200
2703
2704 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESA-KQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNK 322 (747)
2705 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~-~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
2706 .+++.+...+.+.++.++..++.+|..++...... ...+...++++.+...+... +..++..++.++..++.......
2707 T Consensus 71 ~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~ 150 (521)
2708 T 5TBK_D 71 TSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQT 150 (521)
2709 T ss_dssp -CCSHHHHHTTSSCHHHHHHHHHHHHTHHHHHHSSCSHHHHHHTHHHHHHHHHHCCSCHHHHHHHHHHHHHHHTSCHHHH
2710 T ss_pred hcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCCCCCHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHH
2711 Confidence 35566677777777788888999998887643221 12233346677777777643 67788888999988876543333
2712
2713
2714 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDP 400 (747)
2715 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~ 400 (747)
2716 ..+...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|+.++... .++
2717 T Consensus 151 ~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~~ 214 (521)
2718 T 5TBK_D 151 QAVVQSNAVPLFLRLLH-SPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS---------------IPI 214 (521)
2719 T ss_dssp HHHHTTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHHHCHHHHHHHHHTCCHHHHHTTCCTT---------------SCH
2720 T ss_pred HHHHHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhCCC---------------CCH
2721 Confidence 33334457777777776 5567888899999999886432 2222333 6677777766532 123
2722
2723
2724 Q NP_000290.2 401 EVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
2725 Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
2726 ++...+..+|..-. .............+++..|...+.. .+..-...+..+|.
2727 T Consensus 215 ~~~~~a~~~l~~l~---------------------~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~ 267 (521)
2728 T 5TBK_D 215 TFLRNVTWVMVNLC---------------------RHKDPPPPMETIQEILPALCVLIHH------TDVNILVDTVWALS 267 (521)
2729 T ss_dssp HHHHHHHHHHHHHH---------------------CCCSSCCCHHHHHHHHHHHHHHTTC------SCHHHHHHHHHHHH
2730 T ss_pred HHHHHHHHHHHHHH---------------------cCCCCCCCHHHHHHHHHHHHHHhhC------CCHHHHHHHHHHHH
2731 Confidence 33333433332211 0000001111122333333333221 11222223333333
2732
2733
2734 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
2735 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
2736 ++...-+ .....+.+.++++.++.++. +.
2737 T Consensus 268 ~l~~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~ 296 (521)
2738 T 5TBK_D 268 YLTDAGN--------------------------------------------------EQIQMVIDSGIVPHLVPLLS-HQ 296 (521)
2739 T ss_dssp HHHHHCH--------------------------------------------------HHHHHHHHTTCHHHHGGGGG-CS
2740 T ss_pred HHhccCh--------------------------------------------------HHHHHHHHCChHHHHHHHhc-CC
2741 Confidence 3321100 01112234567788888887 46
2742
2743
2744 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFP 638 (747)
2745 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~ 638 (747)
2746 ++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++++|.+++... .. ..+...++++
2747 T Consensus 297 ~~~v~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~ 371 (521)
2748 T 5TBK_D 297 EVKVQTAALRAVGNIVTGTDE-----QTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLVP 371 (521)
2749 T ss_dssp SHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTCGGGHHHHHHCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTCHH
2750 T ss_pred CHHHHHHHHHHHHHHHcCCHH-----HHHHHHhCCHHHhHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHH
2751 Confidence 677888899999998875332 2233344578888888888888889999999999998762 22 2334456778
2752
2753
2754 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
2755 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
2756 .|..++.+ .++.++..++.+|.+++.... .....+.+.++++.|..++.+. ++.++..++.+|.+++...+
2757 T Consensus 372 ~l~~~l~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~~~~L~~~l~~~-~~~v~~~a~~~l~~l~~~~~ 443 (521)
2758 T 5TBK_D 372 MIIHLLDK------GDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVK-DAQVVQVVLDGLSNILKMAE 443 (521)
2759 T ss_dssp HHHHHHHH------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTTCHHHHHGGGGSS-CHHHHHHHHHHHHHHHHHCS
2760 T ss_pred HHHHHHHh------CCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHhH
2761 Confidence 88888776 367788999999999985322 2233344456788888888766 77888999999999887543
2762
2763
2764 No 36
2765 >2Z6G_A B-catenin; Full-Length, Beta-Catenin, CELL ADHESION; 3.4A {Danio rerio}
2766 Probab=98.14 E-value=6.4e-10 Score=126.67 Aligned_cols=381 Identities=19% Similarity=0.217 Sum_probs=223.9 Template_Neff=10.700
2767
2768 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
2769 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
2770 .+++.+..++.+.+..++..++.+|.+++.........+...++++.+..++...+..++..++.+|..++.........
2771 T Consensus 234 ~~i~~L~~lL~~~~~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 313 (780)
2772 T 2Z6G_A 234 GGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLI 313 (780)
2773 T ss_pred CcHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
2774 Confidence 34566666776667788888999998887654333333333567777888887777888889999999888644433333
2775
2776
2777 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
2778 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
2779 +...+++..++.++....+..++..++.+|..++........+.. ++++.|..++... ++++.
2780 T Consensus 314 ~~~~~~~~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~l~~L~~~l~~~----------------~~~v~ 377 (780)
2781 T 2Z6G_A 314 ILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP----------------SQRLV 377 (780)
2782 T ss_pred HHHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHCCHHHHHHHHccCC----------------CHHHH
2783 Confidence 333456777777776223567788888888888765443333333 6677777666531 23343
2784
2785
2786 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
2787 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
2788 ..+..+|+.-.. ...... ...+++..|...+.. .+..-...+..+|.++.
2789 T Consensus 378 ~~al~~L~~l~~---------------------~~~~~~---~~~~~l~~L~~~l~~------~~~~v~~~a~~~L~~l~ 427 (780)
2790 T 2Z6G_A 378 QNCLWTLRNLSD---------------------AATKQE---GMEGLLGTLVQLLGS------DDINVVTCAAGILSNLT 427 (780)
2791 T ss_pred HHHHHHHHHHhc---------------------CCCCHH---HHcChHHHHHHHhcC------CCHHHHHHHHHHHHHHH
2792 Confidence 344433332110 000000 012333333333221 01111222222333322
2793
2794
2795 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK-SKKD 562 (747)
2796 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~s-s~d~ 562 (747)
2797 ... ......+...++++.|+..+.. ..++
2798 T Consensus 428 ~~~--------------------------------------------------~~~~~~~~~~~~l~~L~~~l~~~~~~~ 457 (780)
2799 T 2Z6G_A 428 CNN--------------------------------------------------YKNKMMVCQVGGIEALVRTVLRAGDRE 457 (780)
2800 T ss_pred cCC--------------------------------------------------HHHHHHHHHCChHHHHHHHHhcCCCCH
2801 Confidence 110 0001112345667777776652 1456
2802
2803
2804 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEV 640 (747)
2805 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~L 640 (747)
2806 .++..++.+|.+++..... .......+...++++.|+.++... ++.++..++.+|.+++..... ..+...++++.|
2807 T Consensus 458 ~v~~~a~~~L~~l~~~~~~--~~~~~~~~~~~~~i~~L~~ll~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~l~~L 535 (780)
2808 T 2Z6G_A 458 DITEPAICALRHLTSRHQD--AEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRL 535 (780)
2809 T ss_pred HHHHHHHHHHHHHHcCCcc--HHHHHHHHHHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCHHHHHHHHhCChHHHH
2810 Confidence 7788899999998865321 000112223456788888888765 577889999999999876333 233455677788
2811
2812
2813 Q NP_000290.2 641 TRLLTSHTGN----------------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
2814 Q Consensus 641 l~LL~s~s~~----------------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
2815 +.++...... ...+..++..++.+|.+|+.. ......+...++++.|+.++.+. ++.++..+
2816 T Consensus 536 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~aL~~L~~~-~~~~~~~~~~~~l~~L~~~l~~~-~~~v~~~a 613 (780)
2817 T 2Z6G_A 536 VQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILARD-IHNRIVIRGLNTIPLFVQLLYSP-IENIQRVA 613 (780)
2818 T ss_pred HHHhcCCCHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHHHhCC-hhHHHHHHhCCcHHHHHHHhcCC-CHHHHHHH
2819 Confidence 8777652000 000234888999999999864 44444455556788888888776 78899999
2820
2821
2822 Q NP_000290.2 705 RLLLSDMWSSKELQGVLRQQG 725 (747)
2823 Q Consensus 705 L~aLsnL~~~~~~~~~~~~~~ 725 (747)
2824 +.+|.+++...+....+...|
2825 T Consensus 614 ~~~L~~l~~~~~~~~~~~~~~ 634 (780)
2826 T 2Z6G_A 614 AGVLCELAQDKEAAEAIEAEG 634 (780)
2827 T ss_pred HHHHHHHhcCHHHHHHHHHCC
2828 Confidence 999999997766554444433
2829
2830
2831 No 37
2832 >1JDH_A BETA-CATENIN, hTcf-4; BETA-CATENIN, TCF4, PROTEIN-PROTEIN COMPLEX, TRANSCRIPTION; 1.9A {Homo sapiens} SCOP: a.118.1.1
2833 Probab=98.13 E-value=6.1e-10 Score=114.95 Aligned_cols=326 Identities=17% Similarity=0.189 Sum_probs=198.8 Template_Neff=13.100
2834
2835 Q NP_000290.2 286 LGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKE 365 (747)
2836 Q Consensus 286 ~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~ 365 (747)
2837 .++++.+...+.+.+..++..++.++..++.............++++.+...+....++.++..++.++..+........
2838 T Consensus 16 ~~~i~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~ 95 (529)
2839 T 1JDH_A 16 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLL 95 (529)
2840 T ss_dssp -CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHH
2841 T ss_pred HhhHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHHHHHHHHhCcchHHHHHHHhhCCCCHHHHHHHHHHHHHHhcCHHHHH
2842 Confidence 45677777778777788888999999888765322211111134667777777533567788899999998876544443
2843
2844
2845 Q NP_000290.2 366 ELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTM 444 (747)
2846 Q Consensus 366 ~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (747)
2847 .+.. ++++.|+.++..+ ++++-..+..++..-.... +..+...
2848 T Consensus 96 ~~~~~~~~~~l~~~l~~~----------------~~~~~~~a~~~l~~l~~~~--------------------~~~~~~~ 139 (529)
2849 T 1JDH_A 96 AIFKSGGIPALVKMLGSP----------------VDSVLFYAITTLHNLLLHQ--------------------EGAKMAV 139 (529)
2850 T ss_dssp HHHHTTHHHHHHHHTTCS----------------CHHHHHHHHHHHHHHHHHC--------------------TTHHHHH
2851 T ss_pred HHHHcCCHHHHHHHhcCC----------------CHHHHHHHHHHHHHHHcCC--------------------cchHHHH
2852 Confidence 4444 6777777776532 3444444444433211100 0000100
2853
2854
2855 Q NP_000290.2 445 RNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNN 524 (747)
2856 Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (747)
2857 .-.++++.|...++. -+..-...+...|.++...-
2858 T Consensus 140 -~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~-------------------------------------- 174 (529)
2859 T 1JDH_A 140 -RLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYGN-------------------------------------- 174 (529)
2860 T ss_dssp -HHHTHHHHHHHGGGC------CCHHHHHHHHHHHHHHHTTC--------------------------------------
2861 T ss_pred -HHcChHHHHHHHhcC------CCHHHHHHHHHHHHHHhcCC--------------------------------------
2862 Confidence 012444544444332 12222233333333332100
2863
2864
2865 Q NP_000290.2 525 NYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL 604 (747)
2866 Q Consensus 525 ~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL 604 (747)
2867 ......+.+.++++.++.++....++.++..++.+|.+++.... ....+...++++.+..++
2868 T Consensus 175 ------------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~------~~~~~~~~~~~~~l~~~l 236 (529)
2869 T 1JDH_A 175 ------------QESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS------NKPAIVEAGGMQALGLHL 236 (529)
2870 T ss_dssp ------------HHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTT------HHHHHHHTTHHHHHHTTT
2871 T ss_pred ------------HHHHHHHHHCChhHHHHHHHccCCcHHHHHHHHHHHHHHhcCCc------cHHHHHHCCHHHHHHHHc
2872 Confidence 01112234566788888888742366788889999999887532 133334567888899988
2873
2874
2875 Q NP_000290.2 605 QSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSM 684 (747)
2876 Q Consensus 605 ~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~gi 684 (747)
2877 .+.++.++..++++|.+++......... .++++.+..++.+ .++.++..++.+|.+++...+.....+...+.
2878 T Consensus 237 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~-~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~ 309 (529)
2879 T 1JDH_A 237 TDPSQRLVQNCLWTLRNLSDAATKQEGM-EGLLGTLVQLLGS------DDINVVTCAAGILSNLTCNNYKNKMMVCQVGG 309 (529)
2880 T ss_dssp TSSCHHHHHHHHHHHHHHHTTCTTCSCC-HHHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTH
2881 T ss_pred cCCCHHHHHHHHHHHHHHcchhhhHHHH-chHHHHHHHHhCC------CCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCH
2882 Confidence 8888889999999999998763221111 4566777777765 36788899999999998765555555666677
2883
2884
2885 Q NP_000290.2 685 LNNIINLCRS-SASPKAAEAARLLLSDMWSSKEL 717 (747)
2886 Q Consensus 685 L~~Ll~LL~s-~~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
2887 ++.++..+.. ..++.++..++.+|.+++.....
2888 T Consensus 310 ~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~ 343 (529)
2889 T 1JDH_A 310 IEALVRTVLRAGDREDITEPAICALRHLTSRHQE 343 (529)
2890 T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTT
2891 T ss_pred HHHHHHHHHhcCCChHhHHHHHHHHHHHhcCccc
2892 Confidence 8888876652 12577888999999998866553
2893
2894
2895 No 38
2896 >2Z6H_A Catenin beta-1; Beta-Catenin, C-terminal Domain, Activator, Cell; 2.2A {Homo sapiens}
2897 Probab=98.12 E-value=7.3e-10 Score=121.28 Aligned_cols=378 Identities=20% Similarity=0.248 Sum_probs=205.2 Template_Neff=11.700
2898
2899 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
2900 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
2901 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+...+..++..++.++..++.........+
2902 T Consensus 99 ~i~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 178 (644)
2903 T 2Z6H_A 99 GIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLII 178 (644)
2904 T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
2905 Confidence 45566666766777888899999998876543333333345677778888877778888899999998886444333334
2906
2907
2908 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
2909 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
2910 ...+++..+...+....+..++..++.++..++........+.. ++++.|..++... ++++..
2911 T Consensus 179 ~~~~~~~~L~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~l~~l~~~l~~~----------------~~~~~~ 242 (644)
2912 T 2Z6H_A 179 LASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDP----------------SQRLVQ 242 (644)
2913 T ss_pred HHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHccChHHHHHHHHCCHHHHHHHHhcCC----------------CHHHHH
2914 Confidence 44457777777776333567788888888888765443333333 6666676666532 111222
2915
2916
2917 Q NP_000290.2 405 NATGCLRKRL-----------GMRELLALVPQ-------RATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASR 466 (747)
2918 Q Consensus 405 ~~~~~~~~~~-----------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (747)
2919 .+..+|..-. .+..++.++.. .+...-.++...+......-.-.+.++.|...+.. ..
2920 T Consensus 243 ~a~~~L~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~----~~ 318 (644)
2921 T 2Z6H_A 243 NCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLR----AG 318 (644)
2922 T ss_pred HHHHHHHHHhcCCCCHHHHCchHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCHHHHHHHHHhc----CC
2923 Confidence 2222221100 01111111110 00000111111111000000112334444333221 01
2924
2925
2926 Q NP_000290.2 467 CDDKSVENCMCVLHNLSYRLDAEV------------PTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEE 534 (747)
2927 Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (747)
2928 -+..-.+.+...|.++........ +.-.+.+... .+....+....++.+-.
2929 T Consensus 319 ~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~v~~~a~~~L~~l~---------------- 381 (644)
2930 T 2Z6H_A 319 DREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP-SHWPLIKATVGLIRNLA---------------- 381 (644)
2931 T ss_pred CCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHCCcHHHHHHHhcCC-CCHHHHHHHHHHHHHHh----------------
2932 Confidence 123345666777777765433210 0000000000 00000011111111111
2933
2934
2935 Q NP_000290.2 535 TNPKGSGWLYHSDAIRTYLNLMGKSKK----------------------DATLEACAGALQNLTASKGLMSSGMSQLIGL 592 (747)
2936 Q Consensus 535 ~ni~~~~~lve~G~I~~LL~LL~ss~d----------------------~eVr~~AL~aL~nLs~~s~~~s~~~~~~lli 592 (747)
2937 ........+.+.++++.|+.++.. .. ..++..++.+|.+++..... ...+.
2938 T Consensus 382 ~~~~~~~~l~~~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~L~~l~~~~~~------~~~~~ 454 (644)
2939 T 2Z6H_A 382 LCPANHAPLREQGAIPRLVQLLVR-AHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHN------RIVIR 454 (644)
2940 T ss_pred cCHHHHHHHHHCCcHHHHHHHHcc-CCHHHHHHHhcCCchhhhhcCCCCHHHHHHHHHHHHHHhcCcch------HHHHH
2941 Confidence 001112234566788888888863 32 23777888899988865321 22334
2942
2943
2944 Q NP_000290.2 593 KEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
2945 Q Consensus 593 e~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
2946 ..++++.|+.++.+.++.++..++.+|.+++..... ..+...++++.|..++.+ .++.++..++.+|.+++..
2947 T Consensus 455 ~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~L~~~l~~------~~~~v~~~a~~~L~~l~~~ 528 (644)
2948 T 2Z6H_A 455 GLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHS------RNEGVATYAAAVLFRMSED 528 (644)
2949 T ss_pred HCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCHHHHHHHHHCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHhCC
2950 Confidence 457888899989888889999999999999876433 233445778888888876 3678999999999999875
2951
2952
2953 Q NP_000290.2 672 QP 673 (747)
2954 Q Consensus 672 s~ 673 (747)
2955 .+
2956 T Consensus 529 ~~ 530 (644)
2957 T 2Z6H_A 529 KP 530 (644)
2958 T ss_pred Cc
2959 Confidence 43
2960
2961
2962 No 39
2963 >6SA8_A ring-like DARPin-Armadillo fusion H83_D01, LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG; protein fusion, DARPin, Armadillo, shared; 2.4A {synthetic construct}
2964 Probab=98.11 E-value=7.7e-10 Score=121.20 Aligned_cols=342 Identities=20% Similarity=0.251 Sum_probs=215.3 Template_Neff=11.900
2965
2966 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
2967 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
2968 ..+++.+...+.+.+..++..++..|..++.........+...++++.+..++.+.++.++..++.++..++........
2969 T Consensus 177 ~~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~ 256 (671)
2970 T 6SA8_A 177 KKILKDLVKKLSSPNENELQNALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQ 256 (671)
2971 T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHH
2972 T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHH
2973 Confidence 44566677777777778888899999888765433333444456778888888877888899999999988764443333
2974
2975
2976 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPE 401 (747)
2977 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~ 401 (747)
2978 .+...+.++.+...+. +.++.++..++.++..++... .....+.. ++++.|+.++... +++
2979 T Consensus 257 ~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~----------------~~~ 319 (671)
2980 T 6SA8_A 257 AVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP----------------NEQ 319 (671)
2981 T ss_dssp HHHHTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS----------------CHH
2982 T ss_pred HHHHcCHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCcHHHHHHHHhChHHHHHHHhcCC----------------cHH
2983 Confidence 3444567778888876 566788889999999888643 22233333 6777777776531 344
2984
2985
2986 Q NP_000290.2 402 VFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHN 481 (747)
2987 Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (747)
2988 +-..+..+|..-.. ..+ ..+..+. -.++++.|+..++.. +....+.++..|.+
2989 T Consensus 320 v~~~a~~~L~~l~~------~~~--------------~~~~~~~-~~~~l~~l~~~l~~~------~~~~~~~a~~~L~~ 372 (671)
2990 T 6SA8_A 320 ILQEALWALSNIAS------GGN--------------EQIQAVI-DAGALPALVQLLSSP------NEQILQEALWALSN 372 (671)
2991 T ss_dssp HHHHHHHHHHHHTT------SCH--------------HHHHHHH-HTTHHHHHHHHTTCS------CHHHHHHHHHHHHH
2992 T ss_pred HHHHHHHHHHHHhc------CCc--------------HHHHHHH-hcChHHHHHHHhcCC------CHHHHHHHHHHHHH
2993 Confidence 44444433322110 000 0011111 123444554444321 22333344444444
2994
2995
2996 Q NP_000290.2 482 LSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKK 561 (747)
2997 Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d 561 (747)
2998 +...- ......+.+.++++.|+.++. ..+
2999 T Consensus 373 l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~ 401 (671)
3000 T 6SA8_A 373 IASGG--------------------------------------------------NEQIQAVIDAGALPALVQLLS-SPN 401 (671)
3001 T ss_dssp HTTSC--------------------------------------------------HHHHHHHHHTTHHHHHHHGGG-CSC
3002 T ss_pred HHcCC--------------------------------------------------cHHHHHHHHcCcHHHHHHHhc-CCC
3003 Confidence 43200 001112245567888888887 467
3004
3005
3006 Q NP_000290.2 562 DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL-L-HRVMGNQVFPE 639 (747)
3007 Q Consensus 562 ~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e-~-~~ll~~giI~~ 639 (747)
3008 +.++..++.+|.+++..... ....+.+.++++.|+.++.+.++.++..++.+|.+++.... . ..+...++++.
3009 T Consensus 402 ~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~ 476 (671)
3010 T 6SA8_A 402 EQILQEALWALSNIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPA 476 (671)
3011 T ss_dssp HHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHH
3012 T ss_pred HHHHHHHHHHHHhhcCCCHH-----HHHHHHhcCcHHHHHHHcCCCCHHHHHHHHHHHHHHHcCChHHHHHHHhcCcHHH
3013 Confidence 78888999999999875332 23333456788899999988888999999999999996632 2 23345667888
3014
3015
3016 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINL 691 (747)
3017 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~L 691 (747)
3018 |..++.+ .++.++..++.+|.+|+...+.....+...+.++.++..
3019 T Consensus 477 l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~ll~~ 522 (671)
3020 T 6SA8_A 477 LVQLLSS------PNEQIQDEAEKTLLNIANGSEEQQKAVYDAGALKYLLII 522 (671)
3021 T ss_dssp HHHHTTC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHH
3022 T ss_pred HHHHhhC------CCHHHHHHHHHHHHHHHcCCHHHHHHHhcccHHHHHHHH
3023 Confidence 8888876 367889999999999987655555555555555555544
3024
3025
3026 No 40
3027 >4RXH_B Importin subunit alpha, Large T; ARM repeat, NLS, nuclear import; 1.7553A {Neurospora crassa}
3028 Probab=98.05 E-value=1.2e-09 Score=113.39 Aligned_cols=157 Identities=18% Similarity=0.227 Sum_probs=116.8 Template_Neff=12.500
3029
3030 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
3031 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
3032 ..++++.++.++. +.++.++..++.+|.+++..... ....+...++++.+..++.+.++.++..++.+|.+++.
3033 T Consensus 196 ~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~ 269 (495)
3034 T 4RXH_B 196 IAPALPVLAKLVY-SLDDEVLIDACWAISYLSDGSND-----KIQAVIEAGIPRRLVELLMHASTSVQTPALRSVGNIVT 269 (495)
3035 T ss_dssp HTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTSSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
3036 T ss_pred hcCHHHHHHHHhh-CCCHHHHHHHHHHHHHHhcCCHH-----HHHHHHHCChHHHHHHHHhcCCccHHHHHHHHHHHHhc
3037 Confidence 3456777888887 46778888999999998864332 22333455788888888888888899999999999987
3038
3039
3040 Q NP_000290.2 625 HP-LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
3041 Q Consensus 625 ~~-e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
3042 .. .. ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.|..++.+. ++.++.
3043 T Consensus 270 ~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~ 342 (495)
3044 T 4RXH_B 270 GDDVQTQVIINCGALPCLLSLLSS------NKDGIRKEACWTISNITAGNSAQIQSVIDANIIPPLIHLLSHA-DLKTRK 342 (495)
3045 T ss_dssp SCHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHSS-CHHHHH
3046 T ss_pred CCHHHHHHHHhCCHHHHHHHHHhC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHhcC-CHHHHH
3047 Confidence 63 22 233445677888888876 3678899999999999876554444555556788888888766 778899
3048
3049
3050 Q NP_000290.2 703 AARLLLSDMWSS 714 (747)
3051 Q Consensus 703 aAL~aLsnL~~~ 714 (747)
3052 .++.+|.+++..
3053 T Consensus 343 ~a~~~l~~l~~~ 354 (495)
3054 T 4RXH_B 343 EACWAISNATSG 354 (495)
3055 T ss_dssp HHHHHHHHTTTT
3056 T ss_pred HHHHHHHHHHhc
3057 Confidence 999999998876
3058
3059
3060 No 41
3061 >5XJG_A Vacuolar protein 8, Nucleus-vacuole junction; Vac8p, Nvj1p, Membrane contact site; HET: B3P, PE5; 2.4A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
3062 Probab=98.04 E-value=1.3e-09 Score=111.79 Aligned_cols=133 Identities=20% Similarity=0.248 Sum_probs=82.5 Template_Neff=13.100
3063
3064 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
3065 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
3066 +++.+...+.+.++.++..++.++..+.... .....+...++++.+...+.+.+..++..++.++..++..........
3067 T Consensus 159 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 237 (506)
3068 T 5XJG_A 159 ALIPLTKLAKSKHIRVQRNATGALLNMTHSE-ENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLA 237 (506)
3069 T ss_dssp THHHHHHHTTCSSHHHHHHHHHHHHHTCSSH-HHHHHHHHHTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSHHHHHHHH
3070 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHcCCH-HHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHHHHHHHH
3071 Confidence 4555666666667788888899988887542 222233334567777777777777888888998888875433221111
3072
3073
3074 Q NP_000290.2 326 -RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVI 380 (747)
3075 Q Consensus 326 -l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~ 380 (747)
3076 ...++++.+...+. ..++.++..++.++..++........+.. ++++.+..++.
3077 T Consensus 238 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~ 293 (506)
3078 T 5XJG_A 238 QTEPRLVSKLVSLMD-SPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQ 293 (506)
3079 T ss_dssp HHCTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHT
3080 T ss_pred hhChhHHHHHHHHcc-CCCHHHHHHHHHHHHHHhCCChhHHHHHHcCcHHHHHHHHh
3081 Confidence 11235666677775 45667788888888888765433333332 45555555554
3082
3083
3084 No 42
3085 >6KBM_A Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 2.902A {Saccharomyces cerevisiae}
3086 Probab=98.04 E-value=1.3e-09 Score=111.79 Aligned_cols=133 Identities=20% Similarity=0.248 Sum_probs=82.5 Template_Neff=13.100
3087
3088 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
3089 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
3090 +++.+...+.+.++.++..++.++..+.... .....+...++++.+...+.+.+..++..++.++..++..........
3091 T Consensus 159 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 237 (506)
3092 T 6KBM_A 159 ALIPLTKLAKSKHIRVQRNATGALLNMTHSE-ENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLA 237 (506)
3093 T ss_dssp THHHHHHHTTCSSHHHHHHHHHHHHHTCSSH-HHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSHHHHHHHH
3094 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHcCCH-HHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHHHHHHHH
3095 Confidence 4555666666667788888899988887542 222233334567777777777777888888998888875433221111
3096
3097
3098 Q NP_000290.2 326 -RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVI 380 (747)
3099 Q Consensus 326 -l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~ 380 (747)
3100 ...++++.+...+. ..++.++..++.++..++........+.. ++++.+..++.
3101 T Consensus 238 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~ 293 (506)
3102 T 6KBM_A 238 QTEPRLVSKLVSLMD-SPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQ 293 (506)
3103 T ss_dssp HHCTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHHTSHHHHHHHHHTTCHHHHHHHHT
3104 T ss_pred hhChhHHHHHHHHcc-CCCHHHHHHHHHHHHHHhCCChhHHHHHHcCcHHHHHHHHh
3105 Confidence 11235666677775 45667788888888888765433333332 45555555554
3106
3107
3108 No 43
3109 >4TNM_A Importin-alpha3 / MOS6; armadillo repeat; 2.9A {Arabidopsis thaliana}
3110 Probab=97.99 E-value=2e-09 Score=113.28 Aligned_cols=158 Identities=18% Similarity=0.255 Sum_probs=115.7 Template_Neff=12.300
3111
3112 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
3113 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
3114 ..++++.|+.++. +.++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.
3115 T Consensus 243 ~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~ 316 (531)
3116 T 4TNM_A 243 TQPALPVLERLVQ-SMDEEVLTDACWALSYLSDNSND-----KIQAVIEAGVVPRLIQLLGHSSPSVLIPALRTIGNIVT 316 (531)
3117 T ss_pred hcchHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCCHH-----HHHHHHHCChHHHHHHHHhCCCHHHHHHHHHHHHHHHC
3118 Confidence 3456777777777 46777888999999998865332 22333456788889999988888899999999999987
3119
3120
3121 Q NP_000290.2 625 HPLL--HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
3122 Q Consensus 625 ~~e~--~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
3123 .... ......++++.+..++... .++.++..++.+|.+++...+.....+...++++.|+.++.+. ++.++.
3124 T Consensus 317 ~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~ 390 (531)
3125 T 4TNM_A 317 GDDLQTQMVLDQQALPCLLNLLKNN-----YKKSIKKEACWTISNITAGNADQIQAVIDAGIIQSLVWVLQSA-EFEVKK 390 (531)
3126 T ss_pred CCHHHHHHHHHCCcHHHHHHHhcCC-----CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHhcCC-CHHHHH
3127 Confidence 6322 2333446777888877652 2567888999999999876545555555666788888888765 778888
3128
3129
3130 Q NP_000290.2 703 AARLLLSDMWSS 714 (747)
3131 Q Consensus 703 aAL~aLsnL~~~ 714 (747)
3132 .++.+|.+++..
3133 T Consensus 391 ~a~~~l~~l~~~ 402 (531)
3134 T 4TNM_A 391 EAAWGISNATSG 402 (531)
3135 T ss_pred HHHHHHHHHHcC
3136 Confidence 899999888864
3137
3138
3139 No 44
3140 >6KBN_A Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 3.2A {Saccharomyces cerevisiae}
3141 Probab=97.98 E-value=2.1e-09 Score=112.87 Aligned_cols=133 Identities=20% Similarity=0.248 Sum_probs=86.0 Template_Neff=12.700
3142
3143 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
3144 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
3145 +++.+...+.+.++.++..++.++..+.... .....+...++++.+...+.+.+..++..++.++..++..........
3146 T Consensus 153 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 231 (563)
3147 T 6KBN_A 153 ALIPLTKLAKSKHIRVQRNATGALLNMTHSE-ENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLA 231 (563)
3148 T ss_dssp THHHHHHHTTCSSHHHHHHHHHHHHHTTSSH-HHHHHHHTTTCHHHHHHHTTCSSHHHHHHHHHHHHHHTTSHHHHHHHH
3149 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHhCCH-HHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCHHHHHHHH
3150 Confidence 4555666666667788888999998887542 222233334577777777777777888899999988876433221111
3151
3152
3153 Q NP_000290.2 326 -RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVI 380 (747)
3154 Q Consensus 326 -l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~ 380 (747)
3155 ...++++.+...+. ..++.++..++.++..++........+.. ++++.+..++.
3156 T Consensus 232 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~ 287 (563)
3157 T 6KBN_A 232 QTEPRLVSKLVSLMD-SPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQ 287 (563)
3158 T ss_dssp HHCSSHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHHT
3159 T ss_pred hhchhHHHHHHHHhc-CCCHHHHHHHHHHHHHHhCChhHHHHHHHCCcHHHHHHHHh
3160 Confidence 11236667777775 55677888899999988875443333333 56677776664
3161
3162
3163 No 45
3164 >6KBN_C Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 3.2A {Saccharomyces cerevisiae}
3165 Probab=97.98 E-value=2.1e-09 Score=112.87 Aligned_cols=133 Identities=20% Similarity=0.248 Sum_probs=86.0 Template_Neff=12.700
3166
3167 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
3168 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
3169 +++.+...+.+.++.++..++.++..+.... .....+...++++.+...+.+.+..++..++.++..++..........
3170 T Consensus 153 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 231 (563)
3171 T 6KBN_C 153 ALIPLTKLAKSKHIRVQRNATGALLNMTHSE-ENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLA 231 (563)
3172 T ss_dssp CHHHHHHHTTSSSHHHHHHHHHHHHHHTSSH-HHHHHHHTTTCHHHHHHHTTCSSHHHHHHHHHHHHHHTTSHHHHHHHH
3173 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHhCCH-HHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCHHHHHHHH
3174 Confidence 4555666666667788888999998887542 222233334577777777777777888899999988876433221111
3175
3176
3177 Q NP_000290.2 326 -RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVI 380 (747)
3178 Q Consensus 326 -l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~ 380 (747)
3179 ...++++.+...+. ..++.++..++.++..++........+.. ++++.+..++.
3180 T Consensus 232 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~ 287 (563)
3181 T 6KBN_C 232 QTEPRLVSKLVSLMD-SPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQ 287 (563)
3182 T ss_dssp HSSTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHHTT
3183 T ss_pred hhchhHHHHHHHHhc-CCCHHHHHHHHHHHHHHhCChhHHHHHHHCCcHHHHHHHHh
3184 Confidence 11236667777775 55677888899999988875443333333 56677776664
3185
3186
3187 No 46
3188 >4EV8_A Catenin beta-1; mouse catenin, CELL ADHESION; HET: URE; 1.9A {Mus musculus}
3189 Probab=97.98 E-value=2.1e-09 Score=111.06 Aligned_cols=323 Identities=18% Similarity=0.194 Sum_probs=192.8 Template_Neff=13.100
3190
3191 Q NP_000290.2 286 LGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRR-QNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELK 364 (747)
3192 Q Consensus 286 ~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~-~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~ 364 (747)
3193 .++++.+...+.+.++.++..++.++..+....... ..+.. .+++..+...+....++.++..++.++..++......
3194 T Consensus 17 ~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~ 95 (538)
3195 T 4EV8_A 17 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASR-HAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGL 95 (538)
3196 T ss_pred cCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCChhhH-HHHHhCCChHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHH
3197 Confidence 356677777777777888888999998887643322 12222 2466677776653446678888999999887654433
3198
3199
3200 Q NP_000290.2 365 EELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQT 443 (747)
3201 Q Consensus 365 ~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (747)
3202 ..+.. ++++.|+.++..+ ++++...+..+|..-... . +..++.
3203 T Consensus 96 ~~~~~~~~~~~l~~~l~~~----------------~~~~~~~a~~~l~~l~~~------~--------------~~~~~~ 139 (538)
3204 T 4EV8_A 96 LAIFKSGGIPALVKMLGSP----------------VDSVLFYAITTLHNLLLH------Q--------------EGAKMA 139 (538)
3205 T ss_pred HHHHHCCcHHHHHHHhCCC----------------CHHHHHHHHHHHHHHhCC------C--------------HHHHHH
3206 Confidence 33333 6777777776532 344444444333221100 0 000000
3207
3208
3209 Q NP_000290.2 444 MRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMN 523 (747)
3210 Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (747)
3211 . .-.+++..|...++. -+..-...+...|.++...
3212 T Consensus 140 ~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~-------------------------------------- 174 (538)
3213 T 4EV8_A 140 V-RLAGGLQKMVALLNK------TNVKFLAITTDCLQILAYG-------------------------------------- 174 (538)
3214 T ss_pred H-HHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHhcC--------------------------------------
3215 Confidence 0 012444444444332 0112222222233332210
3216
3217
3218 Q NP_000290.2 524 NNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARL 603 (747)
3219 Q Consensus 524 ~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~L 603 (747)
3220 +......+.+.++++.|+.++....+..++..++.+|.+++..... ...+...++++.+..+
3221 T Consensus 175 ------------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~ 236 (538)
3222 T 4EV8_A 175 ------------NQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSN------KPAIVEAGGMQALGLH 236 (538)
3223 T ss_pred ------------CHHHHHHHHHCChHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHH------HHHHHHCCcHHHHHHH
3224 Confidence 0011112245667888888887423667788899999988865321 2333456788889999
3225
3226
3227 Q NP_000290.2 604 LQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSS 683 (747)
3228 Q Consensus 604 L~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~g 683 (747)
3229 +.+.++.++..++.+|.+++......... .++++.+..++.+ .++.++..++.+|.+++...+.....+...+
3230 T Consensus 237 l~~~~~~~~~~a~~~l~~l~~~~~~~~~~-~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~ 309 (538)
3231 T 4EV8_A 237 LTDPSQRLVQNCLWTLRNLSDAATKQEGM-EGLLGTLVQLLGS------DDINVVTCAAGILSNLTCNNYKNKMMVCQVG 309 (538)
3232 T ss_pred hcCCCHHHHHHHHHHHHHHHcCCCchHHH-cCcHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCC
3233 Confidence 98888889999999999998763221111 3466777777765 3678888999999999765555555555666
3234
3235
3236 Q NP_000290.2 684 MLNNIINLCR--SSASPKAAEAARLLLSDMWSSKE 716 (747)
3237 Q Consensus 684 iL~~Ll~LL~--s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
3238 .++.++..+. .. ++.++..++.+|.+++...+
3239 T Consensus 310 ~~~~l~~~l~~~~~-~~~~~~~a~~~l~~l~~~~~ 343 (538)
3240 T 4EV8_A 310 GIEALVRTVLRAGD-REDITEPAICALRHLTSRHQ 343 (538)
3241 T ss_pred cHHHHHHHHhcCCC-CHHHHHHHHHHHHHHHcCCC
3242 Confidence 7777777665 23 56677788888888876554
3243
3244
3245 No 47
3246 >4BPL_A IMPORTIN SUBUNIT ALPHA-1A, NUCLEOPLASMIN NLS; TRANSPORT PROTEIN, NUCLEAR IMPORT, NUCLEAR; 2.3A {ORYZA SATIVA}
3247 Probab=97.98 E-value=2.2e-09 Score=108.63 Aligned_cols=158 Identities=18% Similarity=0.251 Sum_probs=116.0 Template_Neff=13.000
3248
3249 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
3250 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
3251 ..++++.|+.++. +.++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.
3252 T Consensus 168 ~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~ 241 (454)
3253 T 4BPL_A 168 TRPALPALARLIH-SNDEEVLTDACWALSYLSDGTND-----KIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVT 241 (454)
3254 T ss_dssp HTTHHHHHHHHTT-CCCHHHHHHHHHHHHHHTSSCHH-----HHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTT
3255 T ss_pred HHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhcCChH-----HHHHHHHCCcHHHHHHHhhCCChHHHHHHHHHHHHHhc
3256 Confidence 3456777777777 46777888899999998865332 22333455788888898888888899999999999987
3257
3258
3259 Q NP_000290.2 625 HPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
3260 Q Consensus 625 ~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
3261 ... . ..+...++++.+..++... .++.++..++.+|.+++...+.....+...++++.|..++.+. ++.++.
3262 T Consensus 242 ~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~ 315 (454)
3263 T 4BPL_A 242 GDDAQTQCIIDHQALPCLLSLLTQN-----LKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTA-EFDIKK 315 (454)
3264 T ss_dssp SCHHHHHHHHTTTHHHHHHHHHHSS-----CCHHHHHHHHHHHHHHHTSCHHHHHHHHHHTCHHHHHHHHHHS-CHHHHH
3265 T ss_pred CCHHHHHHHHHCChHHHHHHHHHhc-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCcHHHHHHHhhcC-CHHHHH
3266 Confidence 632 2 2334456777888887652 2577889999999999876555555555666788888888766 778888
3267
3268
3269 Q NP_000290.2 703 AARLLLSDMWSS 714 (747)
3270 Q Consensus 703 aAL~aLsnL~~~ 714 (747)
3271 .++.+|.+++..
3272 T Consensus 316 ~a~~~l~~l~~~ 327 (454)
3273 T 4BPL_A 316 EAAWAISNATSG 327 (454)
3274 T ss_dssp HHHHHHHHHHHH
3275 T ss_pred HHHHHHHHHHcC
3276 Confidence 899999888863
3277
3278
3279 No 48
3280 >4PLS_B Arm00010; PEPTIDE BINDING PROTEIN, designed armadillo; HET: CA; 2.35A {synthetic construct}
3281 Probab=97.96 E-value=2.5e-09 Score=100.09 Aligned_cols=112 Identities=25% Similarity=0.272 Sum_probs=72.2 Template_Neff=13.200
3282
3283 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
3284 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
3285 ++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++.........+.
3286 T Consensus 3 i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~ 82 (281)
3287 T 4PLS_B 3 LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVI 82 (281)
3288 T ss_dssp HHHHHHTTTCSCHHHHHHHHHHHHHHHTCSHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
3289 T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHH
3290 Confidence 34556666667778888899999888765444333444455777777877777778888888888888754333222333
3291
3292
3293 Q NP_000290.2 327 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
3294 Q Consensus 327 ~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
3295 ..++++.+...+. +.++.++..++.++..++.
3296 T Consensus 83 ~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~ 114 (281)
3297 T 4PLS_B 83 DAGALPALVQLLS-SPNEQILQEALWTLGNIAS 114 (281)
3298 T ss_dssp HTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHTT
3299 T ss_pred hCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHhc
3300 Confidence 3345566666665 4455666666666666654
3301
3302
3303 No 49
3304 >5Z8H_A Adenomatous polyposis coli protein, Peptide; APC, inhibitor, PROTEIN BINDING-INHIBITOR complex; HET: PHQ, GOL; 1.79A {Homo sapiens}
3305 Probab=97.95 E-value=2.6e-09 Score=104.87 Aligned_cols=123 Identities=24% Similarity=0.347 Sum_probs=80.3 Template_Neff=12.500
3306
3307 Q NP_000290.2 258 DEKYQAIGAYYIQHTCFQDESAKQQVYQ-LGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKLETRRQNGIREAV 335 (747)
3308 Q Consensus 258 d~eVr~sAL~aLsnLs~~~~~~~~~li~-~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~~ll~~~IL~~Ll 335 (747)
3309 ++.++..++.++.+++...+.....+.. .++++.+..++...++.++..++.++.+++.. .......+...++++.+.
3310 T Consensus 92 ~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~ 171 (339)
3311 T 5Z8H_A 92 SITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALM 171 (339)
3312 T ss_pred CHHHHHHHHHHHHHHcCCCHHHHHHHHHhcChHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCCHHHHHHHHHCCcHHHHH
3313 Confidence 6778888999999887644443333444 46778888888777788889999999998864 222223333456777777
3314
3315
3316 Q NP_000290.2 336 SLLRRTGNAEIQKQLTGLLWNLSS-TDELKEELIA--DALPVLADRVI 380 (747)
3317 Q Consensus 336 ~lL~ss~d~eVr~~AL~aLsnLas-~~~~~~~Lve--giLe~Lv~LL~ 380 (747)
3318 ..+....++.++..++.++.+++. .......+.. ++++.++.++.
3319 T Consensus 172 ~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 219 (339)
3320 T 5Z8H_A 172 ECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLT 219 (339)
3321 T ss_pred HHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHhcChHHHHHHHhc
3322 Confidence 777622466778888888888876 3333323322 45555555554
3323
3324
3325 No 50
3326 >2Z6H_A Catenin beta-1; Beta-Catenin, C-terminal Domain, Activator, Cell; 2.2A {Homo sapiens}
3327 Probab=97.95 E-value=2.8e-09 Score=116.50 Aligned_cols=415 Identities=18% Similarity=0.223 Sum_probs=234.1 Template_Neff=11.700
3328
3329 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3330 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3331 ++..+...+. ..+..++..++.+|..++.... ....+...++++.+...+.+.+..++..++.++..++.........
3332 T Consensus 57 ~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~-~~~~~~~~~~i~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 135 (644)
3333 T 2Z6H_A 57 MVSAIVRTMQNTNDVETARCTAGTLHNLSHHRE-GLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 135 (644)
3334 T ss_pred hHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCHH-HHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
3335 Confidence 4455555555 4566778888888888865432 2223334567778888887777888899999999888654333333
3336
3337
3338 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
3339 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
3340 +...++++.+...+. ..+..++..++.++..++.... ....+.. ++++.|+.++... .++++
3341 T Consensus 136 ~~~~~~~~~L~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~---------------~~~~~ 199 (644)
3342 T 2Z6H_A 136 VRLAGGLQKMVALLN-KTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTY---------------TYEKL 199 (644)
3343 T ss_pred HHHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCC---------------CCHHH
3344 Confidence 333467777877776 5567888889999999886432 2223333 6777777777642 12233
3345
3346
3347 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
3348 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
3349 ...+..++..-.. .+..+..+ ...+.++.|...+.. .+....++++..|.++
3350 T Consensus 200 ~~~a~~~L~~l~~---------------------~~~~~~~~-~~~~~l~~l~~~l~~------~~~~~~~~a~~~L~~l 251 (644)
3351 T 2Z6H_A 200 LWTTSRVLKVLSV---------------------CSSNKPAI-VEAGGMQALGLHLTD------PSQRLVQNCLWTLRNL 251 (644)
3352 T ss_pred HHHHHHHHHHHcc---------------------ChHHHHHH-HHCCHHHHHHHHhcC------CCHHHHHHHHHHHHHH
3353 Confidence 3333333321100 00000000 012334444333321 1334445566666666
3354
3355
3356 Q NP_000290.2 483 SYRLDAE------VPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLM 556 (747)
3357 Q Consensus 483 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL 556 (747)
3358 ....... ++.-...+.. .+.-.......++.+ ....+......+.+.++++.|+..+
3359 T Consensus 252 ~~~~~~~~~~~~~~~~l~~~l~~--~~~~v~~~a~~~L~~---------------l~~~~~~~~~~~~~~~~l~~L~~~l 314 (644)
3360 T 2Z6H_A 252 SDAATKQEGMEGLLGTLVQLLGS--DDINVVTCAAGILSN---------------LTCNNYKNKMMVCQVGGIEALVRTV 314 (644)
3361 T ss_pred hcCCCCHHHHCchHHHHHHHhcC--CCHHHHHHHHHHHHH---------------HhCCCHHHHHHHHhCCHHHHHHHHH
3362 Confidence 5432210 0000000000 000000001111111 0011112223345667888888877
3363
3364
3365 Q NP_000290.2 557 GK-SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHPLL-HRVMG 633 (747)
3366 Q Consensus 557 ~s-s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~e~-~~ll~ 633 (747)
3367 .. ..++.++..++.+|.+++..... .......+...++++.|+.++.+. +..++..++.+|.+++..... ..+..
3368 T Consensus 315 ~~~~~~~~v~~~a~~~L~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~l~~ 392 (644)
3369 T 2Z6H_A 315 LRAGDREDITEPAICALRHLTSRHQE--AEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLRE 392 (644)
3370 T ss_pred hcCCCCHHHHHHHHHHHHHHHcCCCC--HHHHHHHHHHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCHHHHHHHHH
3371 Confidence 52 14567788899999999875331 000012223457788888888765 678889999999999876433 23344
3372
3373
3374 Q NP_000290.2 634 NQVFPEVTRLLTSHTGN----------------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSAS 697 (747)
3375 Q Consensus 634 ~giI~~Ll~LL~s~s~~----------------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d 697 (747)
3376 .++++.|+.++...... ......++..++.+|.+++... .....+...++++.|+.++.+. +
3377 T Consensus 393 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~L~~l~~~~-~~~~~~~~~~~i~~l~~~l~~~-~ 470 (644)
3378 T 2Z6H_A 393 QGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDV-HNRIVIRGLNTIPLFVQLLYSP-I 470 (644)
3379 T ss_pred CCcHHHHHHHHccCCHHHHHHHhcCCchhhhhcCCCCHHHHHHHHHHHHHHhcCc-chHHHHHHCCcHHHHHHHHhCC-C
3380 Confidence 56777777777652100 0002347788999999998753 3334444556788888888776 7
3381
3382
3383 Q NP_000290.2 698 PKAAEAARLLLSDMWSSKELQGVLRQQGF 726 (747)
3384 Q Consensus 698 ~eVr~aAL~aLsnL~~~~~~~~~~~~~~~ 726 (747)
3385 +.++..++.+|.+++...+....+...|+
3386 T Consensus 471 ~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 499 (644)
3387 T 2Z6H_A 471 ENIQRVAAGVLCELAQDKEAAEAIEAEGA 499 (644)
3388 T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHCCc
3389 Confidence 88999999999999987766555544443
3390
3391
3392 No 51
3393 >5AEI_B DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII; DE NOVO PROTEIN, PROTEIN-PEPTIDE COMPLEX; HET: CA, ACT; 1.83A {SYNTHETIC CONSTRUCT}
3394 Probab=97.94 E-value=2.9e-09 Score=99.92 Aligned_cols=114 Identities=25% Similarity=0.274 Sum_probs=73.1 Template_Neff=13.200
3395
3396 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
3397 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
3398 +++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++.........+
3399 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 84 (286)
3400 T 5AEI_B 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 84 (286)
3401 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
3402 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
3403 Confidence 45556666666677788888999988876544333334444567777777777777888888888888875433322223
3404
3405
3406 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
3407 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
3408 ...++++.+...+. +.++.++..++.++..++..
3409 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 118 (286)
3410 T 5AEI_B 85 IDAGALPALVQLLS-SPNEQILQEALWALSNIASG 118 (286)
3411 T ss_dssp HHHTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTS
3412 T ss_pred HHcChHHHHHHHhh-CCCHHHHHHHHHHHHHHhCC
3413 Confidence 33345566666665 44556666677777666643
3414
3415
3416 No 52
3417 >4B8J_A IMPORTIN SUBUNIT ALPHA-1A; TRANSPORT PROTEIN, NUCLEAR LOCALIZATION SIGNAL; 2.001A {ORYZA SATIVA JAPONICA GROUP}
3418 Probab=97.93 E-value=3.2e-09 Score=111.25 Aligned_cols=160 Identities=20% Similarity=0.243 Sum_probs=114.5 Template_Neff=12.400
3419
3420 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
3421 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
3422 .+.++++.++..+....++.++..++.+|.+++..... .......++++.|..++.+.++.++..++.+|.+++
3423 T Consensus 199 ~~~~~l~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~ 272 (528)
3424 T 4B8J_A 199 LANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQ------PSFEQTRPALPALARLIHSNDEEVLTDACWALSYLS 272 (528)
3425 T ss_dssp HHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSC------CCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHT
3426 T ss_pred HHCCcHHHHHHHHccCCCHHHHHHHHHHHHHHhCCCCC------CCHHHHhhHHHHHHHHhcCCCHHHHHHHHHHHHHHh
3427 Confidence 34556777777765334567788899999998865321 222234578888888888888889999999999998
3428
3429
3430 Q NP_000290.2 624 RH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
3431 Q Consensus 624 ~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
3432 .. ... ..+...++++.++.++.+ .++.++..++.+|.+++...+.....+...++++.|+.++.+..+..++
3433 T Consensus 273 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~ 346 (528)
3434 T 4B8J_A 273 DGTNDKIQAVIEAGVCPRLVELLLH------PSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIK 346 (528)
3435 T ss_dssp SSCHHHHHHHHHTTCHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSCCCHHHH
3436 T ss_pred cCChHHHHHHHHCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHHhcCCCHHHH
3437 Confidence 76 222 233445677888888776 3678889999999999875454444555556788888887654356788
3438
3439
3440 Q NP_000290.2 702 EAARLLLSDMWSSK 715 (747)
3441 Q Consensus 702 ~aAL~aLsnL~~~~ 715 (747)
3442 ..++.+|.+++...
3443 T Consensus 347 ~~a~~~l~~l~~~~ 360 (528)
3444 T 4B8J_A 347 KEACWTISNITAGN 360 (528)
3445 T ss_dssp HHHHHHHHHHHTSC
3446 T ss_pred HHHHHHHHHHHcCC
3447 Confidence 89999999987543
3448
3449
3450 No 53
3451 >4R10_A Protein humpback-2, Cadherin-related hmr-1; armadillo repeat, cell adhesion, phosphorylation; HET: SEP; 2.3A {Caenorhabditis elegans}
3452 Probab=97.89 E-value=4.1e-09 Score=110.79 Aligned_cols=417 Identities=14% Similarity=0.174 Sum_probs=224.8 Template_Neff=12.700
3453
3454 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3455 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3456 .+++.+...+.+.++.++..++.+|..+.... .....+...++++.+...+.+.++.++..++.++..++.........
3457 T Consensus 73 ~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 151 (572)
3458 T 4R10_A 73 SFVEALMAASKSSNVNVRRNAIGALSHMSEQR-GGPLLIFRSGGLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSDSRAQ 151 (572)
3459 T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHTTST-THHHHHHHTTTHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCTHHHHH
3460 T ss_pred cHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCC-ChHHHHHhCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCHHHHHH
3461 Confidence 44566666676677788888999998887643 22233334567777777777777888899999999887544333333
3462
3463
3464 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
3465 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
3466 +...++++.+...+. ..++.++..++.++..++... .....+.. ++++.+..++... ..++++
3467 T Consensus 152 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--------------~~~~~~ 216 (572)
3468 T 4R10_A 152 ARALNAVEALTPHLH-KTNPKLLAQVADGLYFLLIDDAPSKITFLSLLGPQILVSILREY--------------SDHRKL 216 (572)
3469 T ss_dssp HHHTTHHHHHGGGGG-CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC--------------TTCHHH
3470 T ss_pred HHHCCHHHHHHHHHh-cCCHHHHHHHHHHHHHHHCCChHHHHHHHhccHHHHHHHHHHHC--------------CCCHHH
3471 Confidence 334467777777776 556788888999999887543 22223333 6777777776521 012333
3472
3473
3474 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
3475 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
3476 ...+..++..-. ..+..+..+.. .+.++.+...+... -+..-...++.+|.++
3477 T Consensus 217 ~~~a~~~l~~l~---------------------~~~~~~~~~~~-~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~~l 269 (572)
3478 T 4R10_A 217 IYTVVRCIRSLS---------------------VCPSNKPALIS-LGCLPALYVELCTA-----KDERSQTAILVAMRNL 269 (572)
3479 T ss_dssp HHHHHHHHHHHT---------------------TSTTHHHHHHH-TTHHHHHHHHHTTC-----CSHHHHHHHHHHHHHH
3480 T ss_pred HHHHHHHHHHHh---------------------cCcchHHHHHh-CCcHHHHHHHHhcC-----CCHHHHHHHHHHHHHH
3481 Confidence 333333332110 00000111110 12222222211110 1223334445555555
3482
3483
3484 Q NP_000290.2 483 SYRLDAE------VPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLM 556 (747)
3485 Q Consensus 483 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL 556 (747)
3486 ....+.. ++.-...+. ..+.........++.+- ...+......+.+.++++.|+.++
3487 T Consensus 270 ~~~~~~~~~~~~~~~~l~~~l~--~~~~~~~~~a~~~l~~l---------------~~~~~~~~~~~~~~~~~~~l~~~l 332 (572)
3488 T 4R10_A 270 SDSATNEENLTQLIIKLLEIIR--VANDGMTACACGTLSNL---------------TCNNTRNKQTVCSHGGIDALVTAI 332 (572)
3489 T ss_dssp GGGCTTCSCCHHHHHHHHHHHH--HCCHHHHHHHHHHHHHH---------------TSSCHHHHHHHHHTTHHHHHHHHH
3490 T ss_pred cCChHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHH---------------HcCCHHHHHHHHHCcHHHHHHHHH
3491 Confidence 4322110 000000000 00000001111111111 111112233345778888898888
3492
3493
3494 Q NP_000290.2 557 GK-SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMG- 633 (747)
3495 Q Consensus 557 ~s-s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~- 633 (747)
3496 .. ..++.++..++++|.+++..... ... ....+...++++.+..++.+.+..++..++.+|.+++..... ..+..
3497 T Consensus 333 ~~~~~~~~~~~~a~~~l~~l~~~~~~-~~~-~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~ 410 (572)
3498 T 4R10_A 333 RRLPEVEEVTEPALCALRHCTARHSL-AEE-AQSELRFCQAFPVILDQLETLRTPVIKAALGVIRNSALLQTNLIELTQE 410 (572)
3499 T ss_dssp HHSTTCHHHHHHHHHHHHHHTSSSTT-HHH-HHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHTSHHHHHHHHHC
3500 T ss_pred HhCCCcHHHHHHHHHHHHHhhccCCC-cHH-HHHHHhhCChHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhHHHHHHH
3501 Confidence 62 23446888999999999432110 000 122233467888889998888888999999999999876332 22222
3502
3503
3504 Q NP_000290.2 634 -----NQVFPEVTRLLTSHTG----------NTSNSEDILSSACYTVRNLMASQPQLAKQYFSS----------SMLNNI 688 (747)
3505 Q Consensus 634 -----~giI~~Ll~LL~s~s~----------~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~----------giL~~L 688 (747)
3506 .++++.+..++..... ....++.++..++.+|.+++.. +.....+... ++++.|
3507 T Consensus 411 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 489 (572)
3508 T 4R10_A 411 QTANGHTAVSLTMDILRRAITAIEENPDIAVDGVPMWGVIEGAVSALHQLANH-PAVAAACCDDIGQVGNPECPPFLDLL 489 (572)
3509 T ss_dssp CCTTCCCHHHHHHHHHHHHHHHHHHCTTCEETTEEHHHHHHHHHHHHHHHTTS-HHHHHHHHHCCCCTTCTTSCCHHHHH
3510 T ss_pred hhhCCCCcHHHHHHHHHHHHHhcccCcchhccCccHHHHHHHHHHHHHHHhCC-HHHHHHHhccccCCCCCCCccHHHHH
3511 Confidence 2344555555432000 0012356777888899988764 3333333332 567777
3512
3513
3514 Q NP_000290.2 689 INLC------RSSASPKAAEAARLLLSDMWSSKELQGVLRQQG 725 (747)
3515 Q Consensus 689 l~LL------~s~~d~eVr~aAL~aLsnL~~~~~~~~~~~~~~ 725 (747)
3516 ..++ ... ++.++..++.+|.+++...+....+...|
3517 T Consensus 490 ~~~l~~~~~~~~~-~~~v~~~a~~~l~~l~~~~~~~~~~~~~~ 531 (572)
3518 T 4R10_A 490 HRLLAHPRLGSMD-DEVLEREILGLLYQLSKRPDGARAVESTG 531 (572)
3519 T ss_dssp HHHHHSHHHHSCS-CSHHHHHHHHHHHHHTSSHHHHHHHHTTT
3520 T ss_pred HHHHhCcccCCCC-hHHHHHHHHHHHHHHhcCCchhhHHHHcC
3521 Confidence 7777 444 77899999999999998766544443333
3522
3523
3524 No 54
3525 >5XJG_A Vacuolar protein 8, Nucleus-vacuole junction; Vac8p, Nvj1p, Membrane contact site; HET: B3P, PE5; 2.4A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
3526 Probab=97.89 E-value=4.2e-09 Score=107.74 Aligned_cols=359 Identities=22% Similarity=0.262 Sum_probs=200.2 Template_Neff=13.100
3527
3528 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
3529 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
3530 +++.+...+.+.++.++..++.++..+....... ...++++.+...+.+.++.++..++.++..++..... ....
3531 T Consensus 39 ~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~----~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~-~~~~ 113 (506)
3532 T 5XJG_A 39 PLKALTTLVYSDNLNLQRSAALAFAEITEKYVRQ----VSREVLEPILILLQSQDPQIQVAACAALGNLAVNNEN-KLLI 113 (506)
3533 T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCCC----CCHHHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSHHH-HHHH
3534 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhchHHH----HhhccHHHHHHHhhCCCHHHHHHHHHHHHHHHcCchh-HHHH
3535 Confidence 4455555666666777777777777776532211 1234566666666666667777777777777654321 1222
3536
3537
3538 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
3539 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
3540 ...++++.+...+. +.++.++..++.++..++........+.. ++++.+..++... ++++-.
3541 T Consensus 114 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~~ 176 (506)
3542 T 5XJG_A 114 VEMGGLEPLINQMM-GDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSK----------------HIRVQR 176 (506)
3543 T ss_dssp HHTTTHHHHHHHHT-SSCHHHHHHHHHHHHHHTTSHHHHHHHHTTTTHHHHHHHTTCS----------------SHHHHH
3544 T ss_pred HhcCcHHHHHHHhh-CCCHHHHHHHHHHHHHHhcCcchhhHHHhcccHHHHHHHccCC----------------CHHHHH
3545 Confidence 23345666666665 45566777777777777654332222222 4555555555421 223322
3546
3547
3548 Q NP_000290.2 405 NATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSY 484 (747)
3549 Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (747)
3550 .+..++..- . .....+..+. ..+.++.+...++. .+..-...+...|.++..
3551 T Consensus 177 ~a~~~l~~l---------~------------~~~~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~ 228 (506)
3552 T 5XJG_A 177 NATGALLNM---------T------------HSEENRKELV-NAGAVPVLVSLLSS------TDPDVQYYCTTALSNIAV 228 (506)
3553 T ss_dssp HHHHHHHHT---------C------------SSHHHHHHHH-HHTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTT
3554 T ss_pred HHHHHHHHH---------c------------CCHHHHHHHH-HCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHhc
3555 Confidence 222222210 0 0000000000 02333333333221 011222223333333221
3556
3557
3558 Q NP_000290.2 485 RLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDAT 564 (747)
3559 Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eV 564 (747)
3560 ..+ . .........++++.++.++. ..++.+
3561 T Consensus 229 ~~~------------------------------------------------~-~~~~~~~~~~~~~~l~~~l~-~~~~~~ 258 (506)
3562 T 5XJG_A 229 DEA------------------------------------------------N-RKKLAQTEPRLVSKLVSLMD-SPSSRV 258 (506)
3563 T ss_dssp SHH------------------------------------------------H-HHHHHHHCTTHHHHHHHHTT-CSSHHH
3564 T ss_pred CHH------------------------------------------------H-HHHHHhhChhHHHHHHHHcc-CCCHHH
3565 Confidence 000 0 00000012346777888887 466778
3566
3567
3568 Q NP_000290.2 565 LEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRL 643 (747)
3569 Q Consensus 565 r~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~L 643 (747)
3570 +..++.+|.+++..... ...+...++++.+..++.+.++.++..++.+|.+++..... ......++++.+..+
3571 T Consensus 259 ~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~ 332 (506)
3572 T 5XJG_A 259 KCQATLALRNLASDTSY------QLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVRL 332 (506)
3573 T ss_dssp HHHHHHHHHHHTTSHHH------HHHHHHTTHHHHHHHHHTCSSHHHHHHHHHHHHHHTTSGGGHHHHHHTTCHHHHHHG
3574 T ss_pred HHHHHHHHHHHhCCChh------HHHHHHcCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCcchHHHHHHCCcHHHHHHH
3575 Confidence 88899999998875321 22334567888888888888888999999999999876433 233445677788888
3576
3577
3578 Q NP_000290.2 644 LTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
3579 Q Consensus 644 L~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
3580 +... .++.++..++++|.+++...+.....+...++++.+..++.+. ++.++..++.++..+....+
3581 T Consensus 333 l~~~-----~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~~~~ 399 (506)
3582 T 5XJG_A 333 LDYK-----DSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKELALDS-PVSVQSEISACFAILALADV 399 (506)
3583 T ss_dssp GGCT-----TCHHHHHHHHHHHHHTSSCCHHHHHHHHTTTHHHHHHHHTTSS-CHHHHHHHHHHHHHHTTCHH
3584 T ss_pred HcCC-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHhCChhHHHHHHHhcC-CHHHHHHHHHHHHHHhccch
3585 Confidence 7652 2467888999999999875544444555556677777777655 56677777777776665443
3586
3587
3588 No 55
3589 >6KBM_A Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 2.902A {Saccharomyces cerevisiae}
3590 Probab=97.89 E-value=4.2e-09 Score=107.74 Aligned_cols=359 Identities=22% Similarity=0.262 Sum_probs=200.2 Template_Neff=13.100
3591
3592 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
3593 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
3594 +++.+...+.+.++.++..++.++..+....... ...++++.+...+.+.++.++..++.++..++..... ....
3595 T Consensus 39 ~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~----~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~-~~~~ 113 (506)
3596 T 6KBM_A 39 PLKALTTLVYSDNLNLQRSAALAFAEITEKYVRQ----VSREVLEPILILLQSQDPQIQVAACAALGNLAVNNEN-KLLI 113 (506)
3597 T ss_dssp HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCCCC----CCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTSHHH-HHHH
3598 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhchHHH----HhhccHHHHHHHhhCCCHHHHHHHHHHHHHHHcCchh-HHHH
3599 Confidence 4455555666666777777777777776532211 1234566666666666667777777777777654321 1222
3600
3601
3602 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFF 404 (747)
3603 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (747)
3604 ...++++.+...+. +.++.++..++.++..++........+.. ++++.+..++... ++++-.
3605 T Consensus 114 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~~ 176 (506)
3606 T 6KBM_A 114 VEMGGLEPLINQMM-GDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSK----------------HIRVQR 176 (506)
3607 T ss_dssp HHTTTHHHHHHHHT-SCCHHHHHHHHHHHHHHTTSHHHHHHHHTTTTHHHHHHHTTCS----------------SHHHHH
3608 T ss_pred HhcCcHHHHHHHhh-CCCHHHHHHHHHHHHHHhcCcchhhHHHhcccHHHHHHHccCC----------------CHHHHH
3609 Confidence 23345666666665 45566777777777777654332222222 4555555555421 223322
3610
3611
3612 Q NP_000290.2 405 NATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSY 484 (747)
3613 Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (747)
3614 .+..++..- . .....+..+. ..+.++.+...++. .+..-...+...|.++..
3615 T Consensus 177 ~a~~~l~~l---------~------------~~~~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~ 228 (506)
3616 T 6KBM_A 177 NATGALLNM---------T------------HSEENRKELV-NAGAVPVLVSLLSS------TDPDVQYYCTTALSNIAV 228 (506)
3617 T ss_dssp HHHHHHHHT---------C------------SSHHHHHHHH-HTTCHHHHHHGGGC------SCHHHHHHHHHHHHHHTT
3618 T ss_pred HHHHHHHHH---------c------------CCHHHHHHHH-HCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHhc
3619 Confidence 222222210 0 0000000000 02333333333221 011222223333333221
3620
3621
3622 Q NP_000290.2 485 RLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDAT 564 (747)
3623 Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eV 564 (747)
3624 ..+ . .........++++.++.++. ..++.+
3625 T Consensus 229 ~~~------------------------------------------------~-~~~~~~~~~~~~~~l~~~l~-~~~~~~ 258 (506)
3626 T 6KBM_A 229 DEA------------------------------------------------N-RKKLAQTEPRLVSKLVSLMD-SPSSRV 258 (506)
3627 T ss_dssp SHH------------------------------------------------H-HHHHHHHCTTHHHHHHHHTT-CSSHHH
3628 T ss_pred CHH------------------------------------------------H-HHHHHhhChhHHHHHHHHcc-CCCHHH
3629 Confidence 000 0 00000012346777888887 466778
3630
3631
3632 Q NP_000290.2 565 LEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRL 643 (747)
3633 Q Consensus 565 r~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~L 643 (747)
3634 +..++.+|.+++..... ...+...++++.+..++.+.++.++..++.+|.+++..... ......++++.+..+
3635 T Consensus 259 ~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~ 332 (506)
3636 T 6KBM_A 259 KCQATLALRNLASDTSY------QLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVRL 332 (506)
3637 T ss_dssp HHHHHHHHHHHHTSHHH------HHHHHHTTCHHHHHHHHTSSCHHHHHHHHHHHHHHTTSGGGHHHHHHTTCHHHHHHH
3638 T ss_pred HHHHHHHHHHHhCCChh------HHHHHHcCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCcchHHHHHHCCcHHHHHHH
3639 Confidence 88899999998875321 22334567888888888888888999999999999876433 233445677788888
3640
3641
3642 Q NP_000290.2 644 LTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
3643 Q Consensus 644 L~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
3644 +... .++.++..++++|.+++...+.....+...++++.+..++.+. ++.++..++.++..+....+
3645 T Consensus 333 l~~~-----~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~~~~ 399 (506)
3646 T 6KBM_A 333 LDYK-----DSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKELALDS-PVSVQSEISACFAILALADV 399 (506)
3647 T ss_dssp TTCC-----SCHHHHHHHHHHHHHHHHHCSSTHHHHHHTTHHHHHHHHSSSS-CHHHHHHHHHHHHHHTTCHH
3648 T ss_pred HcCC-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHhCChhHHHHHHHhcC-CHHHHHHHHHHHHHHhccch
3649 Confidence 7652 2467888999999999875544444555556677777777655 56677777777776665443
3650
3651
3652 No 56
3653 >5IZA_A Adenomatous polyposis coli protein, ACE-GLY-GLY-GLU-ALA-LEU-ALA-TRP-NH2; APC, ASEF, Colon CANCER, Drug; 1.5A {Homo sapiens}
3654 Probab=97.89 E-value=4.5e-09 Score=105.07 Aligned_cols=297 Identities=19% Similarity=0.226 Sum_probs=180.6 Template_Neff=12.000
3655
3656 Q NP_000290.2 236 CSEDIECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-----------NQNVQ 304 (747)
3657 Q Consensus 236 ~~~~~~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-----------d~eVr 304 (747)
3658 |.+-++..+.........+.+.++.++..++.+|.++... ......+...++++.+..++... +..++
3659 T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 101 (354)
3660 T 5IZA_A 23 CWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFD-EEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLR 101 (354)
3661 T ss_dssp HHHHHHHCCTTCCTTTSCCCCGGGGTHHHHHHHHHHHTTS-HHHHHHHHHTTHHHHHHHHHHHHHHHHCSCCCHHHHHHH
3662 T ss_pred HHHHHHhcCCCCCCCCCCCCCCchHhHHHHHHHHHHccCC-HHHHHHHHHcCHHHHHHHHHHhhHHHhCCCCCCCCHHHH
3663 Confidence 3343444444444445556667778888899999998765 33333344456777777777643 67788
3664
3665
3666 Q NP_000290.2 305 QAAAGALRNLVFRSTTNKLETRR-QNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST--DELKEELIA-DALPVLADRVI 380 (747)
3667 Q Consensus 305 ~~AL~aLs~La~~~~~~~~~ll~-~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~--~~~~~~Lve-giLe~Lv~LL~ 380 (747)
3668 ..++.++.+++.........+.. .++++.+..++. ..++.++..++.++.+++.. ......+.. ++++.|+.++.
3669 T Consensus 102 ~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 180 (354)
3670 T 5IZA_A 102 RYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLK-SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECAL 180 (354)
3671 T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGG-CSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHH
3672 T ss_pred HHHHHHHHHHhcCCHHHHHHHHccchHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHHHHHH
3673 Confidence 88999999887644333333333 467777888886 55678888999999999874 222333444 77777877775
3674
3675
3676 Q NP_000290.2 381 IPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSA-DAGRQTMRNYSGLIDSLMAYVQ 459 (747)
3677 Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 459 (747)
3678 .. .++++...+..+|.. +... +..++.+..-.|.++.|...+.
3679 T Consensus 181 ~~---------------~~~~~~~~a~~~L~~---------------------l~~~~~~~~~~~~~~~~~~~~l~~~l~ 224 (354)
3680 T 5IZA_A 181 EV---------------KKESTLKSVLSALWN---------------------LSAHCTENKADICAVDGALAFLVGTLT 224 (354)
3681 T ss_dssp HC---------------CCHHHHHHHHHHHHH---------------------HHTTCHHHHHHHHTSTTHHHHHHHHTC
3682 T ss_pred hc---------------CCHHHHHHHHHHHHH---------------------HHcCChHhHHHHHhhccHHHHHHHHHh
3683 Confidence 42 133443333333322 1111 1122222221345555555444
3684
3685
3686 Q NP_000290.2 460 NCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKG 539 (747)
3687 Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~ 539 (747)
3688 ... ...+..-.+.+..+|.+++..+. .+...
3689 T Consensus 225 ~~~--~~~~~~~~~~~~~~L~~l~~~~~-----------------------------------------------~~~~~ 255 (354)
3690 T 5IZA_A 225 YRS--QTNTLAIIESGGGILRNVSSLIA-----------------------------------------------TNEDH 255 (354)
3691 T ss_dssp SSC--SSCCHHHHHHHHHHHHHHHHHHT-----------------------------------------------TCHHH
3692 T ss_pred hcC--CCCcHHHHHHHHHHHHHHHHHhc-----------------------------------------------CCHHH
3693 Confidence 210 11113334555556666541100 01112
3694
3695
3696 Q NP_000290.2 540 SGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLL 619 (747)
3697 Q Consensus 540 ~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aL 619 (747)
3698 ...+.+.++++.|+.++. ..++.++..++.+|.+++...+. ....+.+.++++.|+.++.+.++.++..++.+|
3699 T Consensus 256 ~~~l~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L 329 (354)
3700 T 5IZA_A 256 RQILRENNCLQTLLQHLK-SHSLTIVSNACGTLWNLSARNPK-----DQEALWDMGAVSMLKNLIHSKHKMIAMGSAAAL 329 (354)
3701 T ss_dssp HHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTSSCHH-----HHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHH
3702 T ss_pred HHHHHHCCHHHHHHHHhh-cCCHHHHHHHHHHHHHHHccCHH-----HHHHHHhCCHHHHHHHHHhccCHHHHHHHHHHH
3703 Confidence 223356678888988887 46777888999999999874332 233445678899999999888888999999999
3704
3705
3706 Q NP_000290.2 620 SNMSRH 625 (747)
3707 Q Consensus 620 snLa~~ 625 (747)
3708 .+++..
3709 T Consensus 330 ~~l~~~ 335 (354)
3710 T 5IZA_A 330 RNLMAN 335 (354)
3711 T ss_dssp HHHHHT
3712 T ss_pred HHHHcc
3713 Confidence 999876
3714
3715
3716 No 57
3717 >4R0Z_A Protein humpback-2; armadillo repeat, cell adhesion; 2.005A {Caenorhabditis elegans}
3718 Probab=97.86 E-value=5.4e-09 Score=112.30 Aligned_cols=401 Identities=14% Similarity=0.143 Sum_probs=217.2 Template_Neff=12.300
3719
3720 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
3721 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
3722 +++.+...+.+.+..++..++.++.+++.........+...++++.+..++...+..++..++.++..++.........+
3723 T Consensus 115 ~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 194 (629)
3724 T 4R0Z_A 115 GLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSDSRAQARALNAVEALTPHLHKTNPKLLAQVADGLYFLLIDDAPSKITF 194 (629)
3725 T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHTTHHHHHGGGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHH
3726 T ss_pred cHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCHHHHHHHHHhccCHHHHHHHHHHHHHHhCCCHHHHHHH
3727 Confidence 45556666666677888889999998866543333344445677888888877778888999999999875544333334
3728
3729
3730 Q NP_000290.2 326 RRQNGIREAVSLLRR-TGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
3731 Q Consensus 326 l~~~IL~~Ll~lL~s-s~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
3732 ...+++..+..++.. ..+..++..++.++..++........+.. +++..++..+... .++++.
3733 T Consensus 195 ~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~~~~~ 259 (629)
3734 T 4R0Z_A 195 LSLLGPQILVSILREYSDHRKLIYTVVRCIRSLSVCPSNKPALISLGCLPALYVELCTA---------------KDERSQ 259 (629)
3735 T ss_dssp HHTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHHHHHHC---------------CCHHHH
3736 T ss_pred HHccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCcchHHHHHHCChHHHHHHHHHhC---------------CCHHHH
3737 Confidence 444567777777651 23456777888888888765443333333 5555554444321 123333
3738
3739
3740 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
3741 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
3742 ..+..++..-..- +..++.+ .+++..+...+.. -+......+...|.++.
3743 T Consensus 260 ~~a~~~l~~l~~~---------------------~~~~~~~---~~~i~~l~~~l~~------~~~~~~~~a~~~l~~l~ 309 (629)
3744 T 4R0Z_A 260 TAILVAMRNLSDS---------------------ATNEENL---TQLIIKLLEIIRV------ANDGMTACACGTLSNLT 309 (629)
3745 T ss_dssp HHHHHHHHHHGGG---------------------CCTTSCC---HHHHHHHHHHTTT------CCHHHHHHHHHHHHHHH
3746 T ss_pred HHHHHHHHHHcCC---------------------cchHHHH---HHHHHHHHHHHhc------CCHHHHHHHHHHHHHHH
3747 Confidence 3333333221110 0001111 1123333322211 12222333444444444
3748
3749
3750 Q NP_000290.2 484 YRLDAEVP---------TRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLN 554 (747)
3751 Q Consensus 484 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~ 554 (747)
3752 ..-+.... .-..-+.....+.........+..+-... ..........+.+.++++.|+.
3753 T Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~------------~~~~~~~~~~~~~~~~~~~l~~ 377 (629)
3754 T 4R0Z_A 310 CNNTRNKQTVCSHGGIDALVTAIRRLPEVEEVTEPALCALRHCTAR------------HSLAEEAQSELRFCQAFPVILD 377 (629)
3755 T ss_dssp TTCHHHHHHHHHTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTSS------------STTHHHHHHHHHHTTCHHHHHH
3756 T ss_pred cCCHHHHHHHHHCCHHHHHHHHHHhCCCcHHHHHHHHHHHHHhccc------------CCCcHHHHHHHhhcChHHHHHH
3757 Confidence 22111000 00000000000000000011111110000 0001111222345677888888
3758
3759
3760 Q NP_000290.2 555 LMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK------EKGLPQIARLLQS----------------GNSDVV 612 (747)
3761 Q Consensus 555 LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie------~giI~~Ll~LL~s----------------~d~eVr 612 (747)
3762 ++. +.++.++..++.+|.+++..... ...+.. .+.++.+..++.. .+..++
3763 T Consensus 378 ~l~-~~~~~~~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 450 (629)
3764 T 4R0Z_A 378 QLE-TLRTPVIKAALGVIRNSALLQTN------LIELTQEQTANGHTAVSLTMDILRRAITAIEENPDIAVDGVPMWGVI 450 (629)
3765 T ss_dssp HHT-TCCHHHHHHHHHHHHHHTTSTTH------HHHHHHCCCTTCCCHHHHHHHHHHHHHHHHHHCTTCEETTEEHHHHH
3766 T ss_pred HHh-cCCHHHHHHHHHHHHHHcccchh------HHHHHhccccCCccHHHHHHHHHHHHHHhcccCCCcccCCeeHHHHH
3767 Confidence 887 46778888999999998865321 111122 3456666666643 234566
3768
3769
3770 Q NP_000290.2 613 RSGASLLSNMSRHPLL-HRVMGN----------QVFPEVTRLLT------SHTGNTSNSEDILSSACYTVRNLMASQPQL 675 (747)
3771 Q Consensus 613 ~~AL~aLsnLa~~~e~-~~ll~~----------giI~~Ll~LL~------s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~ 675 (747)
3772 ..++.+|.+++..... ..+... ++++.+..++. . .++.++..++.+|.+++.. +..
3773 T Consensus 451 ~~~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~------~~~~v~~~a~~~L~~l~~~-~~~ 523 (629)
3774 T 4R0Z_A 451 EGAVSALHQLANHPAVAAACCDDIGQVGNPECPPFLDLLHRLLAHPRLGSM------DDEVLEREILGLLYQLSKR-PDG 523 (629)
3775 T ss_dssp HHHHHHHHHHTTSHHHHHHHHHCCCCTTCTTSCCHHHHHHHHHTCHHHHTC------SCSHHHHHHHHHHHHHTSS-HHH
3776 T ss_pred HHHHHHHHHHhCCHHHHHHHhhccccCCCCCCCcHHHHHHHHhcCcccCCC------chHHHHHHHHHHHHHHhcC-CCh
3777 Confidence 7778888888765333 222222 56777777775 3 3678889999999999854 445
3778
3779
3780 Q NP_000290.2 676 AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKELQ 718 (747)
3781 Q Consensus 676 ~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~~~ 718 (747)
3782 ...+...++++.|..++.+. ++.++..++.+|.++..+....
3783 T Consensus 524 ~~~l~~~~~~~~L~~~l~~~-~~~v~~~a~~~L~~l~~~~~~~ 565 (629)
3784 T 4R0Z_A 524 ARAVESTGVSALLMESRGSQ-YKSVVTYANGVLSNLKRGDSAA 565 (629)
3785 T ss_dssp HHHHHTTTCHHHHHHHTTCS-SHHHHHHHHHHHHHHHHHHC--
3786 T ss_pred HhHHhhccHHHHHHHHhccC-ChhHHHHHHHHHhhccCCChhh
3787 Confidence 55555666788888888766 7888999999999988766553
3788
3789
3790 No 58
3791 >4R0Z_A Protein humpback-2; armadillo repeat, cell adhesion; 2.005A {Caenorhabditis elegans}
3792 Probab=97.85 E-value=5.5e-09 Score=112.24 Aligned_cols=418 Identities=14% Similarity=0.170 Sum_probs=229.8 Template_Neff=12.300
3793
3794 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
3795 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
3796 .+++.+...+.+.+..++..++.+|..+.... .....+...++++.+...+.+.+..++..++.++.+++.........
3797 T Consensus 73 ~~~~~L~~~l~~~~~~~~~~a~~~L~~l~~~~-~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 151 (629)
3798 T 4R0Z_A 73 SFVEALMAASKSSNVNVRRNAIGALSHMSEQR-GGPLLIFRSGGLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSDSRAQ 151 (629)
3799 T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHTTST-THHHHHHHHTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCTTHHHH
3800 T ss_pred cHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCC-CchHHHHhCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHH
3801 Confidence 45566666676677888889999999887643 22233334467777888887777788889999999887544333333
3802
3803
3804 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
3805 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
3806 +...++++.+..++. ..++.++..++.++.+++... .....+.. ++++.|+.++... ..++++
3807 T Consensus 152 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--------------~~~~~~ 216 (629)
3808 T 4R0Z_A 152 ARALNAVEALTPHLH-KTNPKLLAQVADGLYFLLIDDAPSKITFLSLLGPQILVSILREY--------------SDHRKL 216 (629)
3809 T ss_dssp HHHTTHHHHHGGGGG-CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC--------------TTCHHH
3810 T ss_pred HHHCCHHHHHHHHHh-ccCHHHHHHHHHHHHHHhCCCHHHHHHHHHccHHHHHHHHHHHc--------------CCCHHH
3811 Confidence 444467777888776 556788889999999987543 22333333 6777777777621 012233
3812
3813
3814 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
3815 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
3816 ...+..+|..-.. .+..+..+.. .+.+..++..+... .+..-...++..|.++
3817 T Consensus 217 ~~~a~~~l~~l~~---------------------~~~~~~~~~~-~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~~l 269 (629)
3818 T 4R0Z_A 217 IYTVVRCIRSLSV---------------------CPSNKPALIS-LGCLPALYVELCTA-----KDERSQTAILVAMRNL 269 (629)
3819 T ss_dssp HHHHHHHHHHHTT---------------------STTHHHHHHH-TTHHHHHHHHHHHC-----CCHHHHHHHHHHHHHH
3820 T ss_pred HHHHHHHHHHHhc---------------------CcchHHHHHH-CChHHHHHHHHHhC-----CCHHHHHHHHHHHHHH
3821 Confidence 3333333322110 0001111111 12222222111110 1122334445555555
3822
3823
3824 Q NP_000290.2 483 SYRLDAE------VPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLM 556 (747)
3825 Q Consensus 483 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL 556 (747)
3826 +..-+.. ++.-...+.. .+.........++.+ ....+......+.+.++++.|+.++
3827 T Consensus 270 ~~~~~~~~~~~~~i~~l~~~l~~--~~~~~~~~a~~~l~~---------------l~~~~~~~~~~~~~~~~~~~l~~~l 332 (629)
3828 T 4R0Z_A 270 SDSATNEENLTQLIIKLLEIIRV--ANDGMTACACGTLSN---------------LTCNNTRNKQTVCSHGGIDALVTAI 332 (629)
3829 T ss_dssp GGGCCTTSCCHHHHHHHHHHTTT--CCHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHTTHHHHHHHHH
3830 T ss_pred cCCcchHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHH---------------HHcCCHHHHHHHHHCCHHHHHHHHH
3831 Confidence 4322110 0000000000 000000011111111 1111112233346778888888888
3832
3833
3834 Q NP_000290.2 557 GK-SKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMG- 633 (747)
3835 Q Consensus 557 ~s-s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~- 633 (747)
3836 .. ..+..++..++.+|.+++..... ... ....+...++++.|+.++.+.++.++..++.+|.+++..... ..+..
3837 T Consensus 333 ~~~~~~~~~~~~a~~~l~~l~~~~~~-~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~ 410 (629)
3838 T 4R0Z_A 333 RRLPEVEEVTEPALCALRHCTARHSL-AEE-AQSELRFCQAFPVILDQLETLRTPVIKAALGVIRNSALLQTNLIELTQE 410 (629)
3839 T ss_dssp HHCTTCHHHHHHHHHHHHHHTSSSTT-HHH-HHHHHHHTTCHHHHHHHHTTCCHHHHHHHHHHHHHHTTSTTHHHHHHHC
3840 T ss_pred HhCCCcHHHHHHHHHHHHHhcccCCC-cHH-HHHHHhhcChHHHHHHHHhcCCHHHHHHHHHHHHHHcccchhHHHHHhc
3841 Confidence 62 13446888999999999432110 000 123334567788899999888888999999999999876322 22211
3842
3843
3844 Q NP_000290.2 634 -----NQVFPEVTRLLTSHTG----------NTSNSEDILSSACYTVRNLMASQPQLAKQYFSS----------SMLNNI 688 (747)
3845 Q Consensus 634 -----~giI~~Ll~LL~s~s~----------~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~----------giL~~L 688 (747)
3846 .++++.++.++..... ....+..++..++.+|.+++.. +.....+.+. ++++.|
3847 T Consensus 411 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 489 (629)
3848 T 4R0Z_A 411 QTANGHTAVSLTMDILRRAITAIEENPDIAVDGVPMWGVIEGAVSALHQLANH-PAVAAACCDDIGQVGNPECPPFLDLL 489 (629)
3849 T ss_dssp CCTTCCCHHHHHHHHHHHHHHHHHHCTTCEETTEEHHHHHHHHHHHHHHHTTS-HHHHHHHHHCCCCTTCTTSCCHHHHH
3850 T ss_pred cccCCccHHHHHHHHHHHHHHhcccCCCcccCCeeHHHHHHHHHHHHHHHhCC-HHHHHHHhhccccCCCCCCCcHHHHH
3851 Confidence 3455566666532000 0002345667788888888764 4444444443 567777
3852
3853
3854 Q NP_000290.2 689 INLCR------SSASPKAAEAARLLLSDMWSSKELQGVLRQQGF 726 (747)
3855 Q Consensus 689 l~LL~------s~~d~eVr~aAL~aLsnL~~~~~~~~~~~~~~~ 726 (747)
3856 ..++. +. ++.++..++.+|.+++...+....+...|.
3857 T Consensus 490 ~~~l~~~~~~~~~-~~~v~~~a~~~L~~l~~~~~~~~~l~~~~~ 532 (629)
3858 T 4R0Z_A 490 HRLLAHPRLGSMD-DEVLEREILGLLYQLSKRPDGARAVESTGV 532 (629)
3859 T ss_dssp HHHHTCHHHHTCS-CSHHHHHHHHHHHHHTSSHHHHHHHHTTTC
3860 T ss_pred HHHhcCcccCCCc-hHHHHHHHHHHHHHHhcCCChHhHHhhccH
3861 Confidence 77776 44 778899999999999977766555554444
3862
3863
3864 No 59
3865 >1XM9_A plakophilin 1 Plakophilin-1; armadillo repeat, CELL ADHESION; 2.8A {Homo sapiens} SCOP: a.118.1.24
3866 Probab=97.84 E-value=6.1e-09 Score=106.37 Aligned_cols=350 Identities=19% Similarity=0.201 Sum_probs=191.7 Template_Neff=12.600
3867
3868 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
3869 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
3870 .+++.+..++.+.++.++..++.++.+++.........+...++++.++.++. ..+..++..++.+|.+++... ....
3871 T Consensus 44 ~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~-~~~~ 122 (457)
3872 T 1XM9_A 44 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKE 122 (457)
3873 T ss_dssp THHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSS-STHH
3874 T ss_pred CHHHHHHHHhcCCCHHHHHHHHHHHHHHhhCCHHHHHHHHhcChHHHHHHHhhhCCCHHHHHHHHHHHHHHhCCH-HHHH
3875 Confidence 34566677777777888999999999988654443444445567778888876 556778888999999887632 2222
3876
3877
3878 Q NP_000290.2 324 ETRRQNGIREAVSLL----------------RRTGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVIIPFSG 385 (747)
3879 Q Consensus 324 ~ll~~~IL~~Ll~lL----------------~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~~~~~ 385 (747)
3880 .+. .++++.+..++ . ..++.++..++.++.+++........+.. ++++.|+.++......
3881 T Consensus 123 ~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 200 (457)
3882 T 1XM9_A 123 ELI-ADALPVLADRVIIPFSGWCDGNSNMSRE-VVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAA 200 (457)
3883 T ss_dssp HHH-HHHHHHCCCCCCHHHHTCC----------CCCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHH
3884 T ss_pred HHH-cchHHHHHHHhccccCCCCCCCCCcccc-cCCHHHHHHHHHHHHHHccChHHHHHHHhcccHHHHHHHHHHHhhhc
3885 Confidence 222 45677777776 3 44667888899999999876544444443 5677777777642211
3886
3887
3888 Q NP_000290.2 386 WCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLA-------LVPQR-ATSSRVNLSSAD------------------- 438 (747)
3889 Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~------------------- 438 (747)
3890 ...++++...+..+|..-....+... ..+.+ ...+.......+
3891 T Consensus 201 ----------~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (457)
3892 T 1XM9_A 201 ----------SRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEE 270 (457)
3893 T ss_dssp ----------TCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC----------------------------CCCCC
3894 T ss_pred ----------CcCCHHHHHHHHHHHHHHhcccccCCCcchhhhhhcccccccccccccccCcccchhccccccCCCCccc
3895 Confidence 11234444455544433211000000 00000 000000000000
3896
3897
3898 Q NP_000290.2 439 ---AGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFS 515 (747)
3899 Q Consensus 439 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (747)
3900 .+++.+.. .+.+..|...+... -+....+.+...|.|+...-
3901 T Consensus 271 ~~~~~~~~~~~-~~~~~~l~~~l~~~-----~~~~~~~~a~~~L~~l~~~~----------------------------- 315 (457)
3902 T 1XM9_A 271 TNPKGSGWLYH-SDAIRTYLNLMGKS-----KKDATLEACAGALQNLTASK----------------------------- 315 (457)
3903 T ss_dssp SSCCGGGGGGS-HHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHTTCS-----------------------------
3904 T ss_pred CCCchhHHhhc-hhHHHHHHHHhccC-----CCHHHHHHHHHHHHHHHhcc-----------------------------
3905 Confidence 00000000 01111111111000 00000011111111111000
3906
3907
3908 Q NP_000290.2 516 NKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEK 595 (747)
3909 Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~g 595 (747)
3910 +.... ......+.+.++++.|+.++. +.++.++..++.+|.+++.... ....+ ..+
3911 T Consensus 316 ---------------~~~~~-~~~~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~------~~~~~-~~~ 371 (457)
3912 T 1XM9_A 316 ---------------GLMSS-GMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNMSRHPL------LHRVM-GNQ 371 (457)
3913 T ss_dssp ---------------SSHHH-HHHHCCCCCSCCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSGG------GHHHH-HHH
3914 T ss_pred ---------------ccccC-CcchhhhhhcchHHHHHHHHh-cCCHHHHHHHHHHHHHHhcCHH------HHHHH-Hcc
3915 Confidence 00000 001123456778899999998 4677888999999999986432 12232 345
3916
3917
3918 Q NP_000290.2 596 GLPQIARLLQSG------NSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRN 667 (747)
3919 Q Consensus 596 iI~~Ll~LL~s~------d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsn 667 (747)
3920 +++.|+.++... ++.++..++.+|.+|+.. +.. ..+...++++.|..++... .++.++..++.+|.+
3921 T Consensus 372 ~~~~l~~~l~~~~~~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~-----~~~~v~~~a~~~L~~ 446 (457)
3922 T 1XM9_A 372 VFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS-----ASPKAAEAARLLLSD 446 (457)
3923 T ss_dssp THHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCT-----TCHHHHHHHHHHHHT
3924 T ss_pred cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHhccHHHHHHHHHhCC-----CCHHHHHHHHHHHHH
3925 Confidence 788888888765 678899999999999854 333 3445567788888887652 267888999999999
3926
3927
3928 Q NP_000290.2 668 LMAS 671 (747)
3929 Q Consensus 668 La~~ 671 (747)
3930 |+..
3931 T Consensus 447 l~~~ 450 (457)
3932 T 1XM9_A 447 MWSS 450 (457)
3933 T ss_dssp TSSS
3934 T ss_pred Hhhc
3935 Confidence 8864
3936
3937
3938 No 60
3939 >4I2Z_A Protein UNC-45, Heat shock protein; chaperone, myosin folding, protein filaments; 2.9A {Caenorhabditis elegans}
3940 Probab=97.84 E-value=7.3e-09 Score=122.51 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=41.5 Template_Neff=8.600
3941
3942 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVF 316 (747)
3943 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~ 316 (747)
3944 ++.|+.++...+..++..+..++..+... ......+...+.++.|+.++.+.++..+..++.+|..++.
3945 T Consensus 648 ~~~Lv~ll~~~s~~~r~~~~~~l~~l~~~-~~~R~~iv~~G~v~~Ll~ll~~~~~~~~~~Aa~ALa~l~~ 716 (961)
3946 T 4I2Z_A 648 VPACVAVSKTESKNALELIARSLLAFAEY-EDLRGRIIAEGGTVLCLRLTKEASGEGKIKAGHAIAKLGA 716 (961)
3947 T ss_dssp HHHHHHTCCCSCSHHHHHHHHHHHTTSCS-STTHHHHTTTTHHHHHHHHHHHSCTHHHHHHHHHHHHHSS
3948 T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHCchHHHHHHHHhcCChHHHHHHHHHHHHHHc
3949 Confidence 44555555555566677777777777643 3344445555666777777665555566666666665543
3950
3951
3952 No 61
3953 >6SWY_5 Vacuolar import and degradation protein; Suppressed, Suppreseed, LIGASE; 3.2A { Saccharomyces cerevisiae YJM1133}
3954 Probab=97.83 E-value=7.4e-09 Score=121.91 Aligned_cols=402 Identities=11% Similarity=0.070 Sum_probs=223.3 Template_Neff=8.700
3955
3956 Q NP_000290.2 240 IECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFR 317 (747)
3957 Q Consensus 240 ~~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~ 317 (747)
3958 +...+.++..+..++...+..++..++.+|..++..... ....+...++++.++.++...+ +. +..++.+|..++..
3959 T Consensus 281 l~~~~~~~~~L~~Ll~s~~~~lr~~Al~~L~~L~~~~~~~~~~~~~~~g~l~~Li~lL~~~~~~~-~~~al~~L~~L~~~ 359 (921)
3960 T 6SWY_5 281 LRNDATFKMFVLGLLKSNDVNIRCVALKFLLQPYFTEDKKWEDTRTLEKILPYLVKSFNYDPLPW-WFDPFDMLDSLIVL 359 (921)
3961 T ss_dssp STTCSHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSSSTTSCHHHHHHHHHHHHHTTSCSSCCT-TCCHHHHHHHHHHH
3962 T ss_pred hhcccchHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCchhhHHHHccHHHHHHHHcCCCCCch-hchHHHHHHHHHHH
3963 Confidence 334455566666777777788899999999998865332 1233344567888888887654 44 77888888888762
3964
3965
3966 Q NP_000290.2 318 S-------TTNKLETRRQNGIRE-AVSLLRRTG--------NAEIQKQLTGLLWNLSSTDEL-KEELIA--DALPVLADR 378 (747)
3967 Q Consensus 318 ~-------~~~~~~ll~~~IL~~-Ll~lL~ss~--------d~eVr~~AL~aLsnLas~~~~-~~~Lve--giLe~Lv~L 378 (747)
3968 . ......+...+.+.. +..++. .. +..++..++.++..++..... ...+.. ++++.|+.+
3969 T Consensus 360 ~~~~~~~~~~~~~~l~~~g~i~~lL~~ll~-~~~~~~~~~~~~~v~~~al~~L~~L~~~~e~~r~~l~~~~~~l~~L~~l 438 (921)
3970 T 6SWY_5 360 YNEITPMNNPVLTTLAHTNVIFCILSRFAQ-CLSLPQHNEATLKTTTKFIKICASFAASDEKYRLLLLNDTLLLNHLEYG 438 (921)
3971 T ss_dssp HHHHSTTCCHHHHHHHHTTHHHHHHHHHHH-HHTCSSCCHHHHHHHHHHHHHHHHHHTSCHHHHHHHHTTSSHHHHHHHH
3972 T ss_pred hcccCCCCCHHHHHHHHcChHHHHHHHHHH-hcCCccCCcCCHHHHHHHHHHHHHHhCCCHHHHHHHhccccHHHHHHHH
3973 Confidence 1 111122223455565 555554 33 566778888999888875432 232333 567777777
3974
3975
3976 Q NP_000290.2 379 VIIPF-------SGWC------DGNSNMS-REVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAG-RQT 443 (747)
3977 Q Consensus 379 L~~~~-------~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 443 (747)
3978 +.... +.|- .+....+ ....|+++...+..+|+. ++..... ++.
3979 T Consensus 439 L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~al~~L~~---------------------Ls~~~~~lr~~ 497 (921)
3980 T 6SWY_5 439 LESHITLIQDFISLKDEIKETTTESHSMCLPPIYDHDFVAAWLLLLKS---------------------FSRSVSALRTT 497 (921)
3981 T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCTTCCCCCTTHHHHHHHHHHHHH---------------------HTTCHHCCCCC
3982 T ss_pred HHhhHHHHHHHHhccHHHHhcccccccCCCCCCCCHHHHHHHHHHHHH---------------------HhCCHHHHHHH
3983 Confidence 76220 0000 0000000 011124444444444432 1111111 111
3984
3985
3986 Q NP_000290.2 444 MRNYSGLIDSLMAYVQNCVA-ASRC----------DDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTG 512 (747)
3987 Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (747)
3988 +.. .|++..|...++.... ...| +..-...+...|.|++..-
3989 T Consensus 498 l~~-~g~i~~Ll~lL~~~~~~~~~~~~~~~~~~~~~~~v~~~al~aL~nL~~~~-------------------------- 550 (921)
3990 T 6SWY_5 498 LKR-NKIAQLLLQILSKTYTLTKECYFAGQDFMKPEIMIMGITLGSICNFVVEF-------------------------- 550 (921)
3991 T ss_dssp SCC-HHHHHHHHHHHHHHHHHHHHCGGGCSTTTHHHHHHHHHHHHHHHHHTSSS--------------------------
3992 T ss_pred HHH-CChHHHHHHHHHhhccchHhhhcCCcccccccHHHHHHHHHHHHHHHccC--------------------------
3993 Confidence 111 2444444444432200 0000 1111122222222222110
3994
3995
3996 Q NP_000290.2 513 CFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKS----------------------KKDATLEACAG 570 (747)
3997 Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss----------------------~d~eVr~~AL~ 570 (747)
3998 ......+++.|+++.|+.++... .+..++..+++
3999 T Consensus 551 ------------------------~~~~~~l~~~gii~~L~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~al~ 606 (921)
4000 T 6SWY_5 551 ------------------------SNLQSFMLRNGIIDIIEKMLTDPLFNSKKAWDDNEDERRIALQGIPVHEVKANSLW 606 (921)
4001 T ss_dssp ------------------------CTTHHHHHHTTHHHHHHHHHTSTTTCTTSCCCSSCHHHHHHSTTSCCSHHHHHHHH
4002 T ss_pred ------------------------chHHHHHHHCCHHHHHHHHhcChhhccccccCCCccHHHHHhcCCCCHHHHHHHHH
4003 Confidence 01112234556677777766521 45677889999
4004
4005
4006 Q NP_000290.2 571 ALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL-----------L-HRVMG----- 633 (747)
4007 Q Consensus 571 aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e-----------~-~~ll~----- 633 (747)
4008 +|.+++..... . ....+...++++.|+.++.+.++.++..++++|.+++.... . ...+.
4009 T Consensus 607 aL~nL~~~~~~---~-~~~~l~~~~~l~~Ll~lL~~~~~~v~~~a~~~L~nL~~~~~~~~~~ll~~~~~~~~l~~~~~~~ 682 (921)
4010 T 6SWY_5 607 VLRHLMYNCQN---E-EKFQLLAKIPMNLILDFINDPCWAVQAQCFQLLRNLTCNSRKIVNILLEKFKDVEYKIDPQTGN 682 (921)
4011 T ss_dssp HHHHHTTTCCH---H-HHHHHHHHSCHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCSHHHHHHHHTC-------------
4012 T ss_pred HHHHHHcCCCH---H-HHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHhhcccceeeCcCCCC
4013 Confidence 99999875331 0 12344566888999999988888999999999999987632 1 12222
4014
4015
4016 Q NP_000290.2 634 ------NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSS-SMLNNIINLCR---------SSAS 697 (747)
4017 Q Consensus 634 ------~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~-giL~~Ll~LL~---------s~~d 697 (747)
4018 .++++.|+..+.........+..++..++++|.+++...+.....+++. ++++.|..++. .. +
4019 T Consensus 683 ~~~~~~~~ll~~L~~~L~~~~~~~~~~~~v~~~al~~L~nLa~~~~~~~~~ii~~~~il~~L~~lL~~~~~~~~~~~~-~ 761 (921)
4020 T 6SWY_5 683 KISIGSTYLFEFLAKKMRLLNPLDTQQKKAMEGILYIIVNLAAVNENKKQLVIEQDEILNIMSEILVETTTDSSSYGN-D 761 (921)
4021 T ss_dssp ------CCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHCHHHHHHHHHHHTCCSSCCSSGGG-C
4022 T ss_pred ccccccccHHHHHHHHHhccCCCchhcHHHHHHHHHHHHHHHcCCHHHHHHHHhCchHHHHHHHHHHhcCCCccccCC-C
4023 Confidence 3567777777765200000156788999999999997654544444544 67888888887 44 6
4024
4025
4026 Q NP_000290.2 698 PKAAEAARLLLSDMWSSKELQGV 720 (747)
4027 Q Consensus 698 ~eVr~aAL~aLsnL~~~~~~~~~ 720 (747)
4028 +.++..++++|.+|+...+.+..
4029 T Consensus 762 ~~v~~~al~aL~nL~~~~~~~~~ 784 (921)
4030 T 6SWY_5 762 SNLKLACLWVLNNLLWNSSVSHY 784 (921)
4031 T ss_dssp HHHHHHHHHHHHHHHCC------
4032 T ss_pred HHHHHHHHHHHHHHHcCCCcccc
4033 Confidence 78999999999999987655433
4034
4035
4036 No 62
4037 >5IZ8_A Adenomatous polyposis coli protein, ACE-ALA-GLY-GLU-ALA-LEU-ALA-ASP-NH2; APC, ASEF, Colon CANCER, Drug; HET: PGE; 3.06A {Homo sapiens}
4038 Probab=97.83 E-value=6.6e-09 Score=103.80 Aligned_cols=297 Identities=19% Similarity=0.226 Sum_probs=179.9 Template_Neff=12.000
4039
4040 Q NP_000290.2 236 CSEDIECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-----------NQNVQ 304 (747)
4041 Q Consensus 236 ~~~~~~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-----------d~eVr 304 (747)
4042 |.+-++-.+.........+.+.++.++..++.+|.++... ......+...++++.+..++... +..++
4043 T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~L~~l~~~-~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 101 (354)
4044 T 5IZ8_A 23 CWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFD-EEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLR 101 (354)
4045 T ss_dssp HHHHHHHSCSSCCCCSSCCCCGGGGTHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHHHHHHHHHHCSCCCHHHHHHH
4046 T ss_pred HHHHHHhcCCCCCCCCCCCCCCchHhHHHHHHHHHHccCC-HHHHHHHHHcCHHHHHHHHHHhhHHHhCCCCCCCCHHHH
4047 Confidence 4443343344444444555667778888899999988765 33333344456777777777643 67788
4048
4049
4050 Q NP_000290.2 305 QAAAGALRNLVFRSTTNKLETRR-QNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST--DELKEELIA-DALPVLADRVI 380 (747)
4051 Q Consensus 305 ~~AL~aLs~La~~~~~~~~~ll~-~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~--~~~~~~Lve-giLe~Lv~LL~ 380 (747)
4052 ..++.++.+++.........+.. .++++.+..++. ..++.++..++.++.+++.. ......+.. ++++.|+.++.
4053 T Consensus 102 ~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 180 (354)
4054 T 5IZ8_A 102 RYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLK-SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECAL 180 (354)
4055 T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGG-SSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHH
4056 T ss_pred HHHHHHHHHHhcCCHHHHHHHHccchHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHHHHHH
4057 Confidence 88999999987644333333333 467777888886 55678888999999999874 222333444 77777877776
4058
4059
4060 Q NP_000290.2 381 IPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSA-DAGRQTMRNYSGLIDSLMAYVQ 459 (747)
4061 Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 459 (747)
4062 .. .++++...+..+|.. +... +..++.+..-.|.++.|...+.
4063 T Consensus 181 ~~---------------~~~~~~~~a~~~L~~---------------------l~~~~~~~~~~~~~~~~~~~~l~~~l~ 224 (354)
4064 T 5IZ8_A 181 EV---------------KKESTLKSVLSALWN---------------------LSAHCTENKADICAVDGALAFLVGTLT 224 (354)
4065 T ss_dssp HC---------------CSHHHHHHHHHHHHH---------------------HHTSCHHHHHHHHTSTTHHHHHHHHTT
4066 T ss_pred hc---------------CCHHHHHHHHHHHHH---------------------HHcCChHhHHHHHhhccHHHHHHHHHh
4067 Confidence 42 133443333333322 1111 1122222221345555555444
4068
4069
4070 Q NP_000290.2 460 NCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKG 539 (747)
4071 Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~ 539 (747)
4072 ... ...+..-.+.+..+|.+++..+. .+...
4073 T Consensus 225 ~~~--~~~~~~~~~~~~~~L~~l~~~~~-----------------------------------------------~~~~~ 255 (354)
4074 T 5IZ8_A 225 YRS--QTNTLAIIESGGGILRNVSSLIA-----------------------------------------------TNEDH 255 (354)
4075 T ss_dssp CCC--TTSCCHHHHHHHHHHHHHHHHHH-----------------------------------------------TCHHH
4076 T ss_pred hcC--CCCcHHHHHHHHHHHHHHHHHhc-----------------------------------------------CCHHH
4077 Confidence 210 01113334555555666541100 01112
4078
4079
4080 Q NP_000290.2 540 SGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLL 619 (747)
4081 Q Consensus 540 ~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aL 619 (747)
4082 ...+.+.++++.|+.++. ..++.++..++.+|.+++...+. ....+.+.++++.|+.++.+.++.++..++.+|
4083 T Consensus 256 ~~~l~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L 329 (354)
4084 T 5IZ8_A 256 RQILRENNCLQTLLQHLK-SHSLTIVSNACGTLWNLSARNPK-----DQEALWDMGAVSMLKNLIHSKHKMIAMGSAAAL 329 (354)
4085 T ss_dssp HHHHHTTTHHHHHHHTTT-CSCHHHHHHHHHHHHHHSSSCHH-----HHHHHHTTTHHHHHHHHSSCSSHHHHHHHHHHH
4086 T ss_pred HHHHHHCCHHHHHHHHhh-cCCHHHHHHHHHHHHHHHccCHH-----HHHHHHhCCHHHHHHHHHhccCHHHHHHHHHHH
4087 Confidence 223356678888888887 46777888999999999874332 233445678899999999888888999999999
4088
4089
4090 Q NP_000290.2 620 SNMSRH 625 (747)
4091 Q Consensus 620 snLa~~ 625 (747)
4092 .+++..
4093 T Consensus 330 ~~l~~~ 335 (354)
4094 T 5IZ8_A 330 RNLMAN 335 (354)
4095 T ss_dssp HHHHTT
4096 T ss_pred HHHHcc
4097 Confidence 999876
4098
4099
4100 No 63
4101 >3IFQ_A plakoglobin, E-cadherin; armadillo repeat, Cardiomyopathy, Cell adhesion; HET: SO4; 2.8A {Homo sapiens}
4102 Probab=97.83 E-value=6.4e-09 Score=107.67 Aligned_cols=374 Identities=16% Similarity=0.150 Sum_probs=218.5 Template_Neff=13.100
4103
4104 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNK 322 (747)
4105 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
4106 ..+++.+...+.+.++.++..++.++..+..............++++.+...+. ..++.++..++.++..+..... ..
4107 T Consensus 18 ~~~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~-~~ 96 (553)
4108 T 3IFQ_A 18 TRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHRE-GL 96 (553)
4109 T ss_dssp HHTHHHHHHHHTCSCHHHHHHHHHHHHHHTTSHHHHHHHHTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTSHH-HH
4110 T ss_pred cCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCHHHHHHHhcCchHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHH-HH
4111 Confidence 345666777777777888888999998887653221111112356666777666 4556778888888888775432 22
4112
4113
4114 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDP 400 (747)
4115 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~ 400 (747)
4116 ..+...+.++.+...+. +.++.++..++.++..++..... ...+.. ++++.|..++... ++
4117 T Consensus 97 ~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~ 159 (553)
4118 T 3IFQ_A 97 LAIFKSGGIPALVRMLS-SPVESVLFYAITTLHNLLLYQEGAKMAVRLADGLQKMVPLLNKN----------------NP 159 (553)
4119 T ss_dssp HHHHHTTHHHHHHHGGG-CCCHHHHHHHHHHHHHHHHHCTTHHHHHHHTTGGGGTGGGGGSS----------------CH
4120 T ss_pred HHHHHcCcHHHHHHHcc-CCCHHHHHHHHHHHHHHhcCChHHHHHHHhcCHHHHHHHHHhcC----------------CH
4121 Confidence 22333456777777776 55677888888888888764332 222222 6666676666531 33
4122
4123
4124 Q NP_000290.2 401 EVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
4125 Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
4126 ++...+..+|..-... .+ ..+..+ --.++++.|...+... .+......++..|.
4127 T Consensus 160 ~~~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~ 213 (553)
4128 T 3IFQ_A 160 KFLAITTDCLQLLAYG------NQ--------------ESKLII-LANGGPQALVQIMRNY-----SYEKLLWTTSRVLK 213 (553)
4129 T ss_dssp HHHHHHHHHHHHHHTT------CH--------------HHHHHH-HHTTHHHHHHHHHHHC-----CCHHHHHHHHHHHH
4130 T ss_pred HHHHHHHHHHHHHHcC------CH--------------HHHHHH-HHCCHHHHHHHHHhcC-----CcHHHHHHHHHHHH
4131 Confidence 4444444433321100 00 000000 0113344443333210 01111222223333
4132
4133
4134 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
4135 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
4136 +++..- .....+.+.++++.++.++. +.
4137 T Consensus 214 ~l~~~~---------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~ 241 (553)
4138 T 3IFQ_A 214 VLSVCP---------------------------------------------------SNKPAIVEAGGMQALGKHLT-SN 241 (553)
4139 T ss_dssp HHTTST---------------------------------------------------THHHHHHHTTHHHHHHGGGG-SS
4140 T ss_pred HHhCCc---------------------------------------------------chHHHHHHCchHHHHHHHHh-cC
4141 Confidence 322100 00112234567888888887 46
4142
4143
4144 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFP 638 (747)
4145 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~ 638 (747)
4146 ++.++..++.+|.+++..... ... ..++++.+..++.+.++.++..++.+|.+++... .. ..+...++++
4147 T Consensus 242 ~~~~~~~a~~~l~~l~~~~~~------~~~--~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~ 313 (553)
4148 T 3IFQ_A 242 SPRLVQNCLWTLRNLSDVATK------QEG--LESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVE 313 (553)
4149 T ss_dssp CHHHHHHHHHHHHHHHTTCTT------CSC--CHHHHHHHHTTTTCCCHHHHHHHHHHHHHHTTTCHHHHHHHTTTTHHH
4150 T ss_pred CHHHHHHHHHHHHHhCChhHH------HHH--HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHccHHH
4151 Confidence 778888999999999865321 111 2467888888888888889999999999998763 22 2334455777
4152
4153
4154 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ---LAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
4155 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e---~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
4156 .+...+... ..++.++..++.+|.+++...+. ....+...+.++.+..++.+..++.++..++.+|.+++...
4157 T Consensus 314 ~l~~~l~~~----~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~ 389 (553)
4158 T 3IFQ_A 314 ALIHAILRA----GDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRNLALCP 389 (553)
4159 T ss_dssp HHHHHHHHH----TTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHTTTHHHHHHHGGGCTTCHHHHHHHHHHHHHHTTSG
4160 T ss_pred HHHHHHHHc----CCChHhHHHHHHHHHHHhcCCChHHHHHHHHHHcchHHHHHHHHcCCCChHHHHHHHHHHHHHhcCc
4161 Confidence 777766531 02567888999999999875332 11223344567888888876523788899999999998876
4162
4163
4164 Q NP_000290.2 716 ELQGVLRQQG 725 (747)
4165 Q Consensus 716 ~~~~~~~~~~ 725 (747)
4166 +....+...|
4167 T Consensus 390 ~~~~~~~~~~ 399 (553)
4168 T 3IFQ_A 390 ANHAPLQEAA 399 (553)
4169 T ss_dssp GGHHHHHHTT
4170 T ss_pred ccHHHHHHcc
4171 Confidence 6554444333
4172
4173
4174 No 64
4175 >4I2W_A Protein UNC-45, Heat shock 70; chaperone, myosin folding, protein filaments; 3.6A {Caenorhabditis elegans}
4176 Probab=97.83 E-value=7.9e-09 Score=122.23 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=42.2 Template_Neff=8.600
4177
4178 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVF 316 (747)
4179 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~ 316 (747)
4180 +++.|+.++...+..++..+..++..+... ......+...+.++.|+.++.+.++..+..++.+|..++.
4181 T Consensus 647 ~~~~Lv~ll~~~s~~~r~~~~~~l~~l~~~-~~~R~~ivq~g~~~~Ll~ll~~~~~~~~~~Aa~ALa~l~~ 716 (961)
4182 T 4I2W_A 647 AVPACVAVSKTESKNALELIARSLLAFAEY-EDLRGRIIAEGGTVLCLRLTKEASGEGKIKAGHAIAKLGA 716 (961)
4183 T ss_dssp SSHHHHHTTCCCCSHHHHHHHHHHHTTSSS-STTTTTTTTSSHHHHHHHHHHHSTTHHHHHHHHHHHTTSS
4184 T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHCchHHHHHHHHhcCChHHHHHHHHHHHHHHc
4185 Confidence 344555555555566677777777777643 3344445555666777776665555566666666666653
4186
4187
4188 No 65
4189 >4R10_A Protein humpback-2, Cadherin-related hmr-1; armadillo repeat, cell adhesion, phosphorylation; HET: SEP; 2.3A {Caenorhabditis elegans}
4190 Probab=97.79 E-value=8.7e-09 Score=108.23 Aligned_cols=398 Identities=14% Similarity=0.146 Sum_probs=205.5 Template_Neff=12.700
4191
4192 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
4193 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
4194 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+...++.++..++.++..++.........+
4195 T Consensus 115 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 194 (572)
4196 T 4R10_A 115 GLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSDSRAQARALNAVEALTPHLHKTNPKLLAQVADGLYFLLIDDAPSKITF 194 (572)
4197 T ss_dssp THHHHHHGGGCSCHHHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHGGGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHH
4198 T ss_pred cHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHCCChHHHHHH
4199 Confidence 34555666666677888889999998866443333334444677778888877778888899999988875443333333
4200
4201
4202 Q NP_000290.2 326 RRQNGIREAVSLLRR-TGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
4203 Q Consensus 326 l~~~IL~~Ll~lL~s-s~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
4204 ...+++..+...+.. ..+..++..++.++..++........+.. ++++.++..+... .++++.
4205 T Consensus 195 ~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~~~~~ 259 (572)
4206 T 4R10_A 195 LSLLGPQILVSILREYSDHRKLIYTVVRCIRSLSVCPSNKPALISLGCLPALYVELCTA---------------KDERSQ 259 (572)
4207 T ss_dssp HHTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHHHHTTC---------------CSHHHH
4208 T ss_pred HhccHHHHHHHHHHHCCCCHHHHHHHHHHHHHHhcCcchHHHHHhCCcHHHHHHHHhcC---------------CCHHHH
4209 Confidence 344566667766641 23456778888888888765443333333 5555554433321 123333
4210
4211
4212 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
4213 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
4214 ..+..++..-.. ....++.+ .+++..+...++. -+..-...+...|.++.
4215 T Consensus 260 ~~a~~~l~~l~~---------------------~~~~~~~~---~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 309 (572)
4216 T 4R10_A 260 TAILVAMRNLSD---------------------SATNEENL---TQLIIKLLEIIRV------ANDGMTACACGTLSNLT 309 (572)
4217 T ss_dssp HHHHHHHHHHGG---------------------GCTTCSCC---HHHHHHHHHHHHH------CCHHHHHHHHHHHHHHT
4218 T ss_pred HHHHHHHHHHcC---------------------ChHHHHHH---HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHH
4219 Confidence 333333322110 00011111 1123333322211 12222333444444444
4220
4221
4222 Q NP_000290.2 484 YRLDAEVP---------TRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLN 554 (747)
4223 Q Consensus 484 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~ 554 (747)
4224 ..-+.... .-...+.....+.........+..+-.. . ...+......+...++++.++.
4225 T Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~----~--------~~~~~~~~~~~~~~~~~~~l~~ 377 (572)
4226 T 4R10_A 310 CNNTRNKQTVCSHGGIDALVTAIRRLPEVEEVTEPALCALRHCTA----R--------HSLAEEAQSELRFCQAFPVILD 377 (572)
4227 T ss_dssp SSCHHHHHHHHHTTHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTS----S--------STTHHHHHHHHHHTTHHHHHHH
4228 T ss_pred cCCHHHHHHHHHCcHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhc----c--------CCCcHHHHHHHhhCChHHHHHH
4229 Confidence 32111000 0000000000000000000000000000 0 0000111122245567788888
4230
4231
4232 Q NP_000290.2 555 LMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK------EKGLPQIARLLQS----------------GNSDVV 612 (747)
4233 Q Consensus 555 LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie------~giI~~Ll~LL~s----------------~d~eVr 612 (747)
4234 ++. +.+..++..++.+|.+++..... ...+.+ .++++.+..++.. .++.++
4235 T Consensus 378 ~l~-~~~~~v~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 450 (572)
4236 T 4R10_A 378 QLE-TLRTPVIKAALGVIRNSALLQTN------LIELTQEQTANGHTAVSLTMDILRRAITAIEENPDIAVDGVPMWGVI 450 (572)
4237 T ss_dssp HHT-TCCHHHHHHHHHHHHHHHTSHHH------HHHHHHCCCTTCCCHHHHHHHHHHHHHHHHHHCTTCEETTEEHHHHH
4238 T ss_pred HHh-cCCHHHHHHHHHHHHHHhccchh------HHHHHHHhhhCCCCcHHHHHHHHHHHHHhcccCcchhccCccHHHHH
4239 Confidence 887 36667777888888888764221 111122 2344555555432 234566
4240
4241
4242 Q NP_000290.2 613 RSGASLLSNMSRHPLLH-RVMGN----------QVFPEVTRLL------TSHTGNTSNSEDILSSACYTVRNLMASQPQL 675 (747)
4243 Q Consensus 613 ~~AL~aLsnLa~~~e~~-~ll~~----------giI~~Ll~LL------~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~ 675 (747)
4244 ..++.+|.+++...... .+... ++++.+..++ .. .++.++..++.+|.+++.. +..
4245 T Consensus 451 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~------~~~~v~~~a~~~l~~l~~~-~~~ 523 (572)
4246 T 4R10_A 451 EGAVSALHQLANHPAVAAACCDDIGQVGNPECPPFLDLLHRLLAHPRLGSM------DDEVLEREILGLLYQLSKR-PDG 523 (572)
4247 T ss_dssp HHHHHHHHHHTTSHHHHHHHHHCCCCTTCTTSCCHHHHHHHHHHSHHHHSC------SCSHHHHHHHHHHHHHTSS-HHH
4248 T ss_pred HHHHHHHHHHhCCHHHHHHHhccccCCCCCCCccHHHHHHHHHhCcccCCC------ChHHHHHHHHHHHHHHhcC-Cch
4249 Confidence 77788888877653221 11111 4666666666 33 3677888888888888865 344
4250
4251
4252 Q NP_000290.2 676 AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
4253 Q Consensus 676 ~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
4254 ...+...++++.|..++.+. ++.++..++.+|.++....
4255 T Consensus 524 ~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~L~~l~~~~ 562 (572)
4256 T 4R10_A 524 ARAVESTGVSALLMESRGSQ-YKSVVTYANGVLSNLKRGD 562 (572)
4257 T ss_dssp HHHHHTTTTHHHHHHHTTCS-CHHHHHHHHHHHHHHHHHH
4258 T ss_pred hhHHHHcChhhHHhHhhCCC-CchHHHHHHHHHHHhhcCC
4259 Confidence 44455566778888888766 7788888888888887654
4260
4261
4262 No 66
4263 >5T94_B Guanine nucleotide exchange factor SRM1; Nuclear Import, Importin alpha, RCC1; 2.631A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
4264 Probab=97.78 E-value=9.3e-09 Score=108.50 Aligned_cols=159 Identities=19% Similarity=0.225 Sum_probs=117.7 Template_Neff=12.200
4265
4266 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
4267 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
4268 ...++++.|+.++. ..++.++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++
4269 T Consensus 254 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~ 327 (542)
4270 T 5T94_B 254 VVSQALPTLAKLIY-SMDTETLVDACWAISYLSDGPQE-----AIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIV 327 (542)
4271 T ss_dssp HHGGGHHHHHHHTT-CCCHHHHHHHHHHHHHHSSSSHH-----HHHHHHHTTCHHHHHHTTSCSSHHHHHHHHHHHHHHT
4272 T ss_pred HHhcHHHHHHHHHh-cCCHHHHHHHHHHHHHHcCCCHH-----HHHHHHhCCHHHHHHHHhcCCCHHHHHHHHHHHHHHH
4273 Confidence 34556777777777 46677888899999988865332 2333345668888888888888889999999999998
4274
4275
4276 Q NP_000290.2 624 RHPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
4277 Q Consensus 624 ~~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
4278 .... . ......++++.|..++.+ .++.++..++++|.+++...+.....+...++++.|+.++.+. ++.++
4279 T Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~ 400 (542)
4280 T 5T94_B 328 TGNDLQTQVVINAGVLPALRLLLSS------PKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVA-EYKTK 400 (542)
4281 T ss_dssp TSCHHHHHHHHHTTHHHHHHHHTTC------SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHS-CHHHH
4282 T ss_pred cCCHHHHHHHHHCChHHHHHHHhhC------CCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCchHHHHHHHHcC-CHHHH
4283 Confidence 7632 2 233445678888888866 3678889999999999876555555566666788888888766 77888
4284
4285
4286 Q NP_000290.2 702 EAARLLLSDMWSSK 715 (747)
4287 Q Consensus 702 ~aAL~aLsnL~~~~ 715 (747)
4288 ..++.+|.+++...
4289 T Consensus 401 ~~a~~~l~~l~~~~ 414 (542)
4290 T 5T94_B 401 KEACWAISNASSGG 414 (542)
4291 T ss_dssp HHHHHHHHHHHGGG
4292 T ss_pred HHHHHHHHHHHcCC
4293 Confidence 99999999888764
4294
4295
4296 No 67
4297 >6KBN_A Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 3.2A {Saccharomyces cerevisiae}
4298 Probab=97.78 E-value=9.2e-09 Score=107.80 Aligned_cols=358 Identities=22% Similarity=0.258 Sum_probs=207.0 Template_Neff=12.700
4299
4300 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
4301 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
4302 .+++.+...+.+.++.++..++.++..+....... ....+++.+...+.+.++.++..++.++..++..... ...
4303 T Consensus 32 ~~i~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~----~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~-~~~ 106 (563)
4304 T 6KBN_A 32 GPLKALTTLVYSDNLNLQRSAALAFAEITEKYVRQ----VSREVLEPILILLQSQDPQIQVAACAALGNLAVNNEN-KLL 106 (563)
4305 T ss_dssp CTHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCCC----CCHHHHHHHHHHHSSCCHHHHHHHHHHHHHHTTSHHH-HHH
4306 T ss_pred CHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhHHH----hccchHHHHHHHhcCCCHHHHHHHHHHHHHHHcCcch-HHH
4307 Confidence 34566666676677788888888888876532211 2245666777777777777888888888887754322 222
4308
4309
4310 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
4311 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
4312 ....+.++.+...+. ..++.++..++.++..++........+.. ++++.|..++... ++++-
4313 T Consensus 107 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v~ 169 (563)
4314 T 6KBN_A 107 IVEMGGLEPLINQMM-GDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSK----------------HIRVQ 169 (563)
4315 T ss_dssp HHHHTCHHHHHHHHH-SSCHHHHHHHHHHHHHTTCSHHHHHHHHTTTTHHHHHHHTTCS----------------SHHHH
4316 T ss_pred HHHCCcHHHHHHHhh-CCCHHHHHHHHHHHHHHhCCCchHHHHHhcChHHHHHHHccCC----------------CHHHH
4317 Confidence 233355666777665 45667788888888888765433222222 5566666655421 23333
4318
4319
4320 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
4321 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
4322 ..+..++..-. .....+..+. ..++++.+...++. -+..-...+...|.++.
4323 T Consensus 170 ~~a~~~l~~l~---------------------~~~~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 221 (563)
4324 T 6KBN_A 170 RNATGALLNMT---------------------HSEENRKELV-NAGAVPVLVSLLSS------TDPDVQYYCTTALSNIA 221 (563)
4325 T ss_dssp HHHHHHHHHTT---------------------SSHHHHHHHH-TTTCHHHHHHHTTC------SSHHHHHHHHHHHHHHT
4326 T ss_pred HHHHHHHHHHh---------------------CCHHHHHHHH-HCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHh
4327 Confidence 33333322110 0000111111 12344444444331 11222223333333332
4328
4329
4330 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
4331 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
4332 ...+ . .........++++.+..++. +.++.
4333 T Consensus 222 ~~~~------------------------------------------------~-~~~~~~~~~~~~~~l~~~l~-~~~~~ 251 (563)
4334 T 6KBN_A 222 VDEA------------------------------------------------N-RKKLAQTEPRLVSKLVSLMD-SPSSR 251 (563)
4335 T ss_dssp TSHH------------------------------------------------H-HHHHHHHCSSHHHHHHHHTT-CSCHH
4336 T ss_pred CCHH------------------------------------------------H-HHHHHhhchhHHHHHHHHhc-CCCHH
4337 Confidence 2000 0 00000012346777888887 46777
4338
4339
4340 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTR 642 (747)
4341 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~ 642 (747)
4342 ++..++.+|.+++..... ...+...++++.+..++.+.++.++..++.+|.+++..... ......++++.+..
4343 T Consensus 252 ~~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~ 325 (563)
4344 T 6KBN_A 252 VKCQATLALRNLASDTSY------QLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVR 325 (563)
4345 T ss_dssp HHHHHHHHHHHHTTSHHH------HHHHHHTTCHHHHHHHHTCSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTCHHHHHT
4346 T ss_pred HHHHHHHHHHHHhCChhH------HHHHHHCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCcchHHHHHHCCcHHHHHH
4347 Confidence 888999999998875321 22334567888888888888888999999999999876433 23344567788888
4348
4349
4350 Q NP_000290.2 643 LLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
4351 Q Consensus 643 LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
4352 ++... .++.++..++.+|.+++...+.....+...++++.+..++.+. ++.++..++.++..+...
4353 T Consensus 326 ~l~~~-----~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~~ 391 (563)
4354 T 6KBN_A 326 LLDYK-----DSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKELALDS-PVSVQSEISACFAILALA 391 (563)
4355 T ss_dssp TTTCT-----TCHHHHHHHHHHHHHHHHHCSTTHHHHHHTTHHHHHHHHHTSS-CHHHHHHHHHHHHHHTTC
4356 T ss_pred HhCCC-----CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHhCC-CHHHHHHHHHHHHHHhcC
4357 Confidence 87652 2478888999999999876444444455555677777776654 556666666666655543
4358
4359
4360 No 68
4361 >6KBN_C Vacuolar protein 8, Autophagy-related protein; Armadillo repeats, complex, PROTEIN BINDING-PROTEIN; 3.2A {Saccharomyces cerevisiae}
4362 Probab=97.78 E-value=9.2e-09 Score=107.80 Aligned_cols=358 Identities=22% Similarity=0.258 Sum_probs=206.7 Template_Neff=12.700
4363
4364 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
4365 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
4366 .+++.+...+.+.++.++..++.++..+....... ....+++.+...+.+.++.++..++.++..++..... ...
4367 T Consensus 32 ~~i~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~----~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~-~~~ 106 (563)
4368 T 6KBN_C 32 GPLKALTTLVYSDNLNLQRSAALAFAEITEKYVRQ----VSREVLEPILILLQSQDPQIQVAACAALGNLAVNNEN-KLL 106 (563)
4369 T ss_dssp -CHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCCC----CCHHHHHHHHHHHCCSCHHHHHHHHHHHHHHTTSHHH-HHH
4370 T ss_pred CHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhHHH----hccchHHHHHHHhcCCCHHHHHHHHHHHHHHHcCcch-HHH
4371 Confidence 34566666676677788888888888876532211 2245666777777777777888888888887754322 222
4372
4373
4374 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
4375 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
4376 ....+.++.+...+. ..++.++..++.++..++........+.. ++++.|..++... ++++-
4377 T Consensus 107 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v~ 169 (563)
4378 T 6KBN_C 107 IVEMGGLEPLINQMM-GDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSK----------------HIRVQ 169 (563)
4379 T ss_dssp HHHTSCSHHHHHHTT-SSCHHHHHHHHHHHHHTTCSHHHHHHHHGGGCHHHHHHHTTSS----------------SHHHH
4380 T ss_pred HHHCCcHHHHHHHhh-CCCHHHHHHHHHHHHHHhCCCchHHHHHhcChHHHHHHHccCC----------------CHHHH
4381 Confidence 233355666777665 45667788888888888765433222222 5566666655421 23333
4382
4383
4384 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
4385 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
4386 ..+..++..-. .....+..+. ..++++.+...++. -+..-...+...|.++.
4387 T Consensus 170 ~~a~~~l~~l~---------------------~~~~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 221 (563)
4388 T 6KBN_C 170 RNATGALLNMT---------------------HSEENRKELV-NAGAVPVLVSLLSS------TDPDVQYYCTTALSNIA 221 (563)
4389 T ss_dssp HHHHHHHHHHT---------------------SSHHHHHHHH-TTTCHHHHHHHTTC------SSHHHHHHHHHHHHHHT
4390 T ss_pred HHHHHHHHHHh---------------------CCHHHHHHHH-HCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHh
4391 Confidence 33333322110 0000111111 12344444444331 11222223333333332
4392
4393
4394 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
4395 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
4396 ...+ . .........++++.+..++. +.++.
4397 T Consensus 222 ~~~~------------------------------------------------~-~~~~~~~~~~~~~~l~~~l~-~~~~~ 251 (563)
4398 T 6KBN_C 222 VDEA------------------------------------------------N-RKKLAQTEPRLVSKLVSLMD-SPSSR 251 (563)
4399 T ss_dssp TSHH------------------------------------------------H-HHHHHHSSTTHHHHHHHHTT-CSSHH
4400 T ss_pred CCHH------------------------------------------------H-HHHHHhhchhHHHHHHHHhc-CCCHH
4401 Confidence 2000 0 00000012346777888887 46777
4402
4403
4404 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTR 642 (747)
4405 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~ 642 (747)
4406 ++..++.+|.+++..... ...+...++++.+..++.+.++.++..++.+|.+++..... ......++++.+..
4407 T Consensus 252 ~~~~a~~~l~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~ 325 (563)
4408 T 6KBN_C 252 VKCQATLALRNLASDTSY------QLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVR 325 (563)
4409 T ss_dssp HHHHHHHHHHHHTTSHHH------HHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTCHHHHHH
4410 T ss_pred HHHHHHHHHHHHhCChhH------HHHHHHCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCcchHHHHHHCCcHHHHHH
4411 Confidence 888999999998875321 22334567888888888888888999999999999876433 23344567788888
4412
4413
4414 Q NP_000290.2 643 LLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
4415 Q Consensus 643 LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
4416 ++... .++.++..++.+|.+++...+.....+...++++.+..++.+. ++.++..++.++..+...
4417 T Consensus 326 ~l~~~-----~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~l~~~ 391 (563)
4418 T 6KBN_C 326 LLDYK-----DSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKELALDS-PVSVQSEISACFAILALA 391 (563)
4419 T ss_dssp HTTCS-----SCHHHHHHHHHHHHHHHHHCSTTSHHHHTTCHHHHHHHHHTSS-CHHHHHHHHHHHHHHTTC
4420 T ss_pred HhCCC-----CCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHhCC-CHHHHHHHHHHHHHHhcC
4421 Confidence 87652 2478888999999999876444444455555677777776654 556666666666655543
4422
4423
4424 No 69
4425 >2Z6G_A B-catenin; Full-Length, Beta-Catenin, CELL ADHESION; 3.4A {Danio rerio}
4426 Probab=97.75 E-value=1.2e-08 Score=115.80 Aligned_cols=373 Identities=17% Similarity=0.153 Sum_probs=224.6 Template_Neff=10.700
4427
4428 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
4429 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
4430 ..+++.+...+.+.++.++..++.+|..+..............+++..+...+.+ .+..++..++.+|..+..... ..
4431 T Consensus 149 ~~~l~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~L~~~~~~~vr~~a~~~L~~l~~~~~-~~ 227 (780)
4432 T 2Z6G_A 149 TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHRE-GL 227 (780)
4433 T ss_pred cChHHHHHHHccCCCHHHHHHHHHHHHHHhCChHHHHHHHhCCCHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCHH-HH
4434 Confidence 3566777777877788899999999998876532221111122466777777765 677888889999988875422 22
4435
4436
4437 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI-A-DALPVLADRVIIPFSGWCDGNSNMSREVVDP 400 (747)
4438 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lv-e-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~ 400 (747)
4439 ..+...++++.+..++. ..++.++..++.+|..++.........+ . ++++.|+.++..+ ++
4440 T Consensus 228 ~~~~~~~~i~~L~~lL~-~~~~~v~~~al~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~----------------~~ 290 (780)
4441 T 2Z6G_A 228 LAIFKSGGIPALVNMLG-SPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT----------------NV 290 (780)
4442 T ss_pred HHHHHCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCC----------------CH
4443 Confidence 22333567778888886 5567788899999998886533222222 2 6677777766531 34
4444
4445
4446 Q NP_000290.2 401 EVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
4447 Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
4448 ++-..+..+|..-.... ...+..+. ..+++..|...+... .+.+-.+.++.+|.
4449 T Consensus 291 ~v~~~a~~~L~~l~~~~--------------------~~~~~~~~-~~~~~~~L~~~l~~~-----~~~~v~~~a~~~L~ 344 (780)
4450 T 2Z6G_A 291 KFLAITTDCLQILAYGN--------------------QESKLIIL-ASGGPQALVNIMRTY-----TYEKLLWTTSRVLK 344 (780)
4451 T ss_pred HHHHHHHHHHHHHHcCC--------------------HHHHHHHH-HCCcHHHHHHHhCCC-----CCHHHHHHHHHHHH
4452 Confidence 44455555554311100 00011110 123444444333221 01112222222332
4453
4454
4455 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
4456 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
4457 +++... .....+.+.++++.|+.++. +.
4458 T Consensus 345 ~l~~~~---------------------------------------------------~~~~~~~~~~~l~~L~~~l~-~~ 372 (780)
4459 T 2Z6G_A 345 VLSVCS---------------------------------------------------SNKPAIVEAGGMQALGLHLT-DP 372 (780)
4460 T ss_pred HHhCCH---------------------------------------------------HHHHHHHHCCHHHHHHHHcc-CC
4461 Confidence 222100 00112245667888888887 46
4462
4463
4464 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFP 638 (747)
4465 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~ 638 (747)
4466 +..++..++.+|.+++..... .. ...++++.|+.++.+.+..++..++.+|.+++.. ... ..+...++++
4467 T Consensus 373 ~~~v~~~al~~L~~l~~~~~~------~~--~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~ 444 (780)
4468 T 2Z6G_A 373 SQRLVQNCLWTLRNLSDAATK------QE--GMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIE 444 (780)
4469 T ss_pred CHHHHHHHHHHHHHHhcCCCC------HH--HHcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHH
4470 Confidence 778888999999999864321 11 1256788888888888888999999999999876 222 2334456777
4471
4472
4473 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL---AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
4474 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~---~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
4475 .|+..+... ..++.++..++.+|.+++...+.. ...+...++++.|+.++....+..++..++.+|.+++...
4476 T Consensus 445 ~L~~~l~~~----~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~v~~~a~~~L~~l~~~~ 520 (780)
4477 T 2Z6G_A 445 ALVRTVLRA----GDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCP 520 (780)
4478 T ss_pred HHHHHHhcC----CCCHHHHHHHHHHHHHHHcCCccHHHHHHHHHHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCH
4479 Confidence 777766521 035678899999999998653221 2223334567888888875435678899999999988776
4480
4481
4482 Q NP_000290.2 716 ELQGVLRQQ 724 (747)
4483 Q Consensus 716 ~~~~~~~~~ 724 (747)
4484 +....+...
4485 T Consensus 521 ~~~~~~~~~ 529 (780)
4486 T 2Z6G_A 521 ANHAPLREQ 529 (780)
4487 T ss_pred HHHHHHHhC
4488 Confidence 654444333
4489
4490
4491 No 70
4492 >5EWP_B Uncharacterized protein; translocation and attachment of rhoptries; 1.8A {Plasmodium falciparum Santa Lucia}
4493 Probab=97.73 E-value=1.3e-08 Score=96.81 Aligned_cols=118 Identities=16% Similarity=0.189 Sum_probs=81.2 Template_Neff=11.800
4494
4495 Q NP_000290.2 263 AIGAYYIQHTCFQ--DESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRR 340 (747)
4496 Q Consensus 263 ~sAL~aLsnLs~~--~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~s 340 (747)
4497 ..++.++.++... .......+...+.++.+..++...+..++..++.++.+++.........+...+.++.++.++.
4498 T Consensus 60 ~~~~~~l~~l~~~~~~~~~~~~~~~~g~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~- 138 (252)
4499 T 5EWP_B 60 ALSATQLAILASKENEPHYKDAIREANGIAVFINLLKSHELDRVHAAVVALSFLSVDNVKNCICMFESGALPYLISGMK- 138 (252)
4500 T ss_dssp HHHHHHHHHHHTCTTCTHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTCHHHHHHHTT-
4501 T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHcccHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHhh-
4502 Confidence 4677788777754 2333344445567788888887777778889999999988654444444444567777888776
4503
4504
4505 Q NP_000290.2 341 TGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVII 381 (747)
4506 Q Consensus 341 s~d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
4507 ..++.++..++.++.+++.. ......+.+ ++++.|+.++..
4508 T Consensus 139 ~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 181 (252)
4509 T 5EWP_B 139 SNIDGMKAACAQTCRNIFVLDKKYKKEFLKLGGITQLVNLLEL 181 (252)
4510 T ss_dssp CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHTTSC
4511 T ss_pred CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHCChHHHHHHHhcC
4512 Confidence 55678889999999999864 333334444 777888877764
4513
4514
4515 No 71
4516 >5XGC_A Rap1 GTPase-GDP dissociation stimulator 1; armadillo GEF, ONCOPROTEIN; 2.1A {Homo sapiens}
4517 Probab=97.72 E-value=1.3e-08 Score=103.51 Aligned_cols=358 Identities=19% Similarity=0.180 Sum_probs=198.3 Template_Neff=13.200
4518
4519 Q NP_000290.2 257 QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVS 336 (747)
4520 Q Consensus 257 sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~ 336 (747)
4521 .++.++..++.++..+.... .....+...++++.+...+.+.++.++..++.++..++...+.....+...++++.+..
4522 T Consensus 5 ~~~~~~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ 83 (503)
4523 T 5XGC_A 5 SQSSCKAKVANIIAEVAKNE-FMRIPCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVK 83 (503)
4524 T ss_dssp -------------------C-CCCCCSSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHSCCCSHHHHHHHHHTTHHHHHHH
4525 T ss_pred chHHHHHHHHHHHHHHhcCh-hhhhhhhhcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCchHHHHHHHCChHHHHHH
4526 Confidence 34567777888888887642 22333444567788888888778888999999999988654333333444567778888
4527
4528
4529 Q NP_000290.2 337 LLRRT-GNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRL 414 (747)
4530 Q Consensus 337 lL~ss-~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (747)
4531 .+... .++.++..++.++..++........+.. ++++.|+.++.... ++++-..+..+|..-
4532 T Consensus 84 ~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~---------------~~~~~~~a~~~l~~l- 147 (503)
4533 T 5XGC_A 84 LLGIHCQNAALTEMCLVAFGNLAELESSKEQFASTNIAEELVKLFKKQI---------------EHDKREMIFEVLAPL- 147 (503)
4534 T ss_dssp HHHHTTTCHHHHHHHHHHHHHHTTSHHHHHHHTTTTHHHHHHHHHHHCC---------------CHHHHHHHHHHHHHH-
4535 T ss_pred HHhccCCCHHHHHHHHHHHHHHHccHHHHHHHhcCCHHHHHHHHHHhcC---------------ChhHHHHHHHHHHHH-
4536 Confidence 87622 3677888999999998876443333333 67777777776421 233333333333211
4537
4538
4539 Q NP_000290.2 415 GMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRY 494 (747)
4540 Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (747)
4541 ...+..+..+. -.|.+..++..+... ++.........+.+...
4542 T Consensus 148 --------------------~~~~~~~~~~~-~~~~~~~l~~~l~~~------~~~~~~~~~~~l~~~~~---------- 190 (503)
4543 T 5XGC_A 148 --------------------AENDAIKLQLV-EAGLVECLLEIVQQK------VDSDKEDDITELKTGSD---------- 190 (503)
4544 T ss_dssp --------------------TTSHHHHHHHH-HTTHHHHHHHHHHHH------TTCCCHHHHHHHHHHHH----------
4545 T ss_pred --------------------HcCHHHHHHHH-HCCHHHHHHHHHHhc------CCCCCHHHHHHHHHHHH----------
4546 Confidence 11111111111 123444444433221 11111111111100000
4547
4548
4549 Q NP_000290.2 495 RQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSD---AIRTYLNLMGKSKKDATLEACAGA 571 (747)
4550 Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G---~I~~LL~LL~ss~d~eVr~~AL~a 571 (747)
4551 .+.+- ... .+. ...+...+ .++.++.++. +.++.++..++.+
4552 T Consensus 191 ------------------~~~~~----~~~---------~~~---~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~ 235 (503)
4553 T 5XGC_A 191 ------------------LMVLL----LLG---------DES---MQKLFEGGKGSVFQRVLSWIP-SNNHQLQLAGALA 235 (503)
4554 T ss_dssp ------------------HHHHH----TTS---------HHH---HHHHHGGGTCHHHHHHHHHTT-SSCHHHHHHHHHH
4555 T ss_pred ------------------HHHHH----HhC---------Cch---HHHHHhcCcccHHHHHHHHcc-CCCHHHHHHHHHH
4556 Confidence 00000 000 000 01112222 6777888887 4677888899999
4557
4558
4559 Q NP_000290.2 572 LQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ----SGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTS 646 (747)
4560 Q Consensus 572 L~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~----s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s 646 (747)
4561 |.+++..... ...+.+.++++.|+.++. +.+..++..++.+|.+++..... ..+...++++.+..++.+
4562 T Consensus 236 L~~l~~~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~ 309 (503)
4563 T 5XGC_A 236 IANFARNDAN------CIHMVDNGIVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKS 309 (503)
4564 T ss_dssp HHHHCSSHHH------HHHHHHTTHHHHHHHHHHTTTTTCCHHHHHHHHHHHHHHTCSHHHHHHHHHHTHHHHHHTTTTC
4565 T ss_pred HHHHHCChhH------HHHHHHCCHHHHHHHHHHhccccCCHHHHHHHHHHHHHhcCCHHHHHHHHHcCHHHHHHHHHcC
4566 Confidence 9999874321 333456688888988887 56788899999999999876433 333445678888888876
4567
4568
4569 Q NP_000290.2 647 HTGNTSNSEDILSSACYTVRNLMASQPQLAKQYF-SSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
4570 Q Consensus 647 ~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lv-e~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
4571 .++.++..++++|.+++...+.....+. ..++++.++.++.+.....++..++.+|.+++...
4572 T Consensus 310 ------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~ 373 (503)
4573 T 5XGC_A 310 ------EMPPVQFKLLGTLRMLIDAQAEAAEQLGKNVKLVERLVEWCEAKDHAGVMGESNRLLSALIRHS 373 (503)
4574 T ss_dssp ------CCHHHHHHHHHHHHHHTTTCHHHHHHHHTCHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHHHH
4575 T ss_pred ------CCHHHHHHHHHHHHHHHccCHHHHHHHccccchHHHHHHHHccCCccchHHHHHHHHHHHHHHc
4576 Confidence 3678899999999999875433333332 24567788888776523378888999998886544
4577
4578
4579 No 72
4580 >6BW9_A Importin subunit alpha-3, Protein W; Complex, Hendra virus, Importin, Karyopherin; 1.6A {Homo sapiens}
4581 Probab=97.70 E-value=1.6e-08 Score=102.40 Aligned_cols=367 Identities=16% Similarity=0.162 Sum_probs=222.4 Template_Neff=12.900
4582
4583 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTN 321 (747)
4584 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~ 321 (747)
4585 ...++.+...+.+.++.++..++.++..+...... ....+...++++.+...+. ..++.++..++.++..++......
4586 T Consensus 8 ~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~ 87 (459)
4587 T 6BW9_A 8 NTSLEAIVQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQ 87 (459)
4588 T ss_dssp --CHHHHHHHHTCSSHHHHHHHHHHHHHHHHSSSSCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHTTSCHHH
4589 T ss_pred ccchHHHHHhccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHCChHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHH
4590 Confidence 34556667777777788899999999888764321 1122333456777777776 456778888999998887654433
4591
4592
4593 Q NP_000290.2 322 KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVD 399 (747)
4594 Q Consensus 322 ~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~ 399 (747)
4595 ...+...++++.+...+. +.++.++..++.++..++... .....+.. ++++.++.++... .+
4596 T Consensus 88 ~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~ 151 (459)
4597 T 6BW9_A 88 TQAVVQSNAVPLFLRLLH-SPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS---------------IP 151 (459)
4598 T ss_dssp HHHHHHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTCSTT---------------SC
4599 T ss_pred HHHHhhCCHHHHHHHHhc-CCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHhccCCC---------------CC
4600 Confidence 333334457777888776 556788889999999887652 22222333 5666666666421 12
4601
4602
4603 Q NP_000290.2 400 PEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVL 479 (747)
4604 Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (747)
4605 +++-..+..++..- ..............+++..+...+.. .+..-...+...|
4606 T Consensus 152 ~~~~~~a~~~l~~l---------------------~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l 204 (459)
4607 T 6BW9_A 152 ITFLRNVTWVMVNL---------------------CRHKDPPPPMETIQEILPALCVLIHH------TDVNILVDTVWAL 204 (459)
4608 T ss_dssp HHHHHHHHHHHHHH---------------------HCCCSSCCCHHHHHHHHHHHHHHTTC------CCHHHHHHHHHHH
4609 T ss_pred HHHHHHHHHHHHHH---------------------hcCCCCCCCHHHHHHHHHHHHHHHhc------CCHHHHHHHHHHH
4610 Confidence 33333333332211 10000001111223344444433321 1112222223233
4611
4612
4613 Q NP_000290.2 480 HNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKS 559 (747)
4614 Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss 559 (747)
4615 .++...- ......+.+.++++.++.++. +
4616 T Consensus 205 ~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~ 233 (459)
4617 T 6BW9_A 205 SYLTDAG--------------------------------------------------NEQIQMVIDSGIVPHLVPLLS-H 233 (459)
4618 T ss_dssp HHHHTSC--------------------------------------------------HHHHHHHHHTTCHHHHGGGGG-C
4619 T ss_pred HHHhhcC--------------------------------------------------hHHHHHHHhCChHHHHHHHcC-C
4620 Confidence 3322100 001112244567788888887 4
4621
4622
4623 Q NP_000290.2 560 KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVF 637 (747)
4624 Q Consensus 560 ~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI 637 (747)
4625 .++.++..++.+|.+++...+. ....+.+.++++.+..++.+.++.++..++.+|.+++... .. ......+++
4626 T Consensus 234 ~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~ 308 (459)
4627 T 6BW9_A 234 QEVKVQTAALRAVGNIVTGTDE-----QTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAVIDANLV 308 (459)
4628 T ss_dssp SSHHHHHHHHHHHHHHTTSCHH-----HHHHHHTTTGGGGCHHHHTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCH
4629 T ss_pred CCHHHHHHHHHHHHHHHcCCHH-----HHHHHhcccchhcHHHHhhCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHCCHH
4630 Confidence 6778888999999999875332 2233344578888888888888889999999999998662 22 233445677
4631
4632
4633 Q NP_000290.2 638 PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQ-PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
4634 Q Consensus 638 ~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s-~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
4635 +.+..++.+ .++.++..++.+|.+++... ......+.+.++++.|..++.+. ++.++..++.+|.+++...+
4636 T Consensus 309 ~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~a~~~l~~l~~~~~ 381 (459)
4637 T 6BW9_A 309 PMIIHLLDK------GDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPPFCNLLTVK-DAQVVQVVLDGLSNILKMAE 381 (459)
4638 T ss_dssp HHHHHHHHH------SCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHGGGGCS-CHHHHHHHHHHHHHHHHHCT
4639 T ss_pred HHHHHHHHh------CCHHHHHHHHHHHHHHHHhCCHHHHHHHHHCCcHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHhH
4640 Confidence 888888776 36778899999999998532 22333444456788888888766 77889999999999876544
4641
4642
4643 No 73
4644 >5D5K_C Importin subunit alpha-1, Poly [ADP-ribose]; PARP-2 NLS, PARP-2, poly(ADP-ribose)polymerase-2, Importin; 1.9A {Mus musculus}
4645 Probab=97.66 E-value=2e-08 Score=101.26 Aligned_cols=364 Identities=17% Similarity=0.188 Sum_probs=216.7 Template_Neff=13.100
4646
4647 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
4648 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
4649 +++.++..+. ..++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++.........
4650 T Consensus 57 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 136 (466)
4651 T 5D5K_C 57 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 136 (466)
4652 T ss_dssp HHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHH
4653 T ss_pred cHHHHHHHhhCCCChHHHHHHHHHHHHHcCCChHHHHHHhccchHHHHHHHhcCCCCcHHHHHHHHHHHHhcCCHHHHHH
4654 Confidence 4555666665 345678888889998887654433334444567778888888777888999999999988654433333
4655
4656
4657 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAE-----IQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
4658 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~e-----Vr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
4659 +...++++.+...+. ..+.. ++..++.++..++.......... .++++.+..++..
4660 T Consensus 137 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 199 (466)
4661 T 5D5K_C 137 VIKHGAIDPLLALLA-VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH---------------- 199 (466)
4662 T ss_dssp HHHTTCHHHHHHTTC-SSCGGGSCHHHHHHHHHHHHHHSCCCSSCCCHHHHHHHHHHHHHHTTS----------------
4663 T ss_pred HHHCCcHHHHHHHhh-CCCcccccHHHHHHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHHcC----------------
4664 Confidence 334456677777775 33333 77788888888876433222221 2455666666542
4665
4666
4667 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
4668 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
4669 .|+++...+..++..-.... + .....+ --.+++..|...+.. .+..-...+..
4670 T Consensus 200 ~~~~~~~~a~~~l~~l~~~~------~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~ 252 (466)
4671 T 5D5K_C 200 NDPEVLADSCWAISYLTDGP------N--------------ERIEMV-VKKGVVPQLVKLLGA------TELPIVTPALR 252 (466)
4672 T ss_dssp SCHHHHHHHHHHHHHHTSSC------H--------------HHHHHH-HTTTCHHHHHHHHTC------SCHHHHHHHHH
4673 T ss_pred CCHHHHHHHHHHHHHHhcCC------c--------------hHHHHH-HHCChHHHHHHHhcC------CCchHHHHHHH
4674 Confidence 13444444444443211100 0 000000 012233333333221 11112222333
4675
4676
4677 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
4678 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
4679 .|.++.... ......+.+.++++.++.++.
4680 T Consensus 253 ~l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 282 (466)
4681 T 5D5K_C 253 AIGNIVTGT--------------------------------------------------DEQTQKVIDAGALAVFPSLLT 282 (466)
4682 T ss_dssp HHHHHTTSC--------------------------------------------------HHHHHHHHHTTGGGGHHHHTT
4683 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHHccChhHhHHHHhh
4684 Confidence 333332100 001112245567888888887
4685
4686
4687 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGN 634 (747)
4688 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~ 634 (747)
4689 +.++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...
4690 T Consensus 283 -~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~ 356 (466)
4691 T 5D5K_C 283 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC 356 (466)
4692 T ss_dssp -CSSHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHT
4693 T ss_pred -CCCHHHHHHHHHHHHHHHcCCHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhC
4694 Confidence 46778888999999999875332 233334557888899988888888999999999999875 2 22 233445
4695
4696
4697 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS------QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
4698 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~------s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
4699 ++++.+..++.+ .++.++..++.+|.+++.. .......+.+.++++.+..++.+. ++.++..++.++
4700 T Consensus 357 ~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l 429 (466)
4701 T 5D5K_C 357 GIIEPLMNLLSA------KDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE-NESVYKASLNLI 429 (466)
4702 T ss_dssp TCHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTHHHHHHHGGGCS-SHHHHHHHHHHH
4703 T ss_pred CcHHHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHcCHHHHHHHHHhCC-cHHHHHHHHHHH
4704 Confidence 577788888776 3678889999999999862 122333344456778888888766 788999999999
4705
4706
4707 Q NP_000290.2 709 SDMWSSKE 716 (747)
4708 Q Consensus 709 snL~~~~~ 716 (747)
4709 .+++...+
4710 T Consensus 430 ~~l~~~~~ 437 (466)
4711 T 5D5K_C 430 EKYFSVEE 437 (466)
4712 T ss_dssp HHHC----
4713 T ss_pred HHhccCCc
4714 Confidence 99887543
4715
4716
4717 No 74
4718 >4UAF_B Importin alpha 1 import receptor; importin karyopherin complex NLS, PROTEIN; HET: PO4; 1.698A {Mus musculus}
4719 Probab=97.63 E-value=2.4e-08 Score=100.65 Aligned_cols=364 Identities=17% Similarity=0.187 Sum_probs=219.0 Template_Neff=13.100
4720
4721 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
4722 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
4723 +++.++..+. ..++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++.........
4724 T Consensus 57 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 136 (466)
4725 T 4UAF_B 57 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 136 (466)
4726 T ss_pred cHHHHHHHhhCCCChHHHHHHHHHHHHHhcCChHHHHHHHccChHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHH
4727 Confidence 4555666665 345678888888998887654433334444567778888888777888999999999988654433333
4728
4729
4730 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAE-----IQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
4731 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~e-----Vr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
4732 +...++++.+...+. ..... ++..++.++..++.......... .++++.+..++..
4733 T Consensus 137 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 199 (466)
4734 T 4UAF_B 137 VIKHGAIDPLLALLA-VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH---------------- 199 (466)
4735 T ss_pred HHHCCcHHHHHHHhh-CCCcccccHHHHHHHHHHHHHHHcCCCCCCChhHHHHHHHHHHHHHcC----------------
4736 Confidence 334456677777775 33333 77788888888876433222221 2555666666542
4737
4738
4739 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
4740 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
4741 .|+++...+..++..-... .+ .....+ --.+++..|...+.. .+..-...+..
4742 T Consensus 200 ~~~~~~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~ 252 (466)
4743 T 4UAF_B 200 NDPEVLADSCWAISYLTDG------PN--------------ERIEMV-VKKGVVPQLVKLLGA------TELPIVTPALR 252 (466)
4744 T ss_pred CCHHHHHHHHHHHHHHhcC------Cc--------------HHHHHH-HHCChHHHHHHHhcC------CChhHHHHHHH
4745 Confidence 1344544444444321100 00 000000 012233333333221 11112222233
4746
4747
4748 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
4749 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
4750 .|.++.... ......+.+.++++.+..++.
4751 T Consensus 253 ~l~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 282 (466)
4752 T 4UAF_B 253 AIGNIVTGT--------------------------------------------------DEQTQKVIDAGALAVFPSLLT 282 (466)
4753 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHhccCHHHHHHHHhc
4754 Confidence 333332100 001112245567888888887
4755
4756
4757 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGN 634 (747)
4758 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~ 634 (747)
4759 +.++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...
4760 T Consensus 283 -~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~ 356 (466)
4761 T 4UAF_B 283 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC 356 (466)
4762 T ss_pred -CCCHHHHHHHHHHHHHHhcCCHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhC
4763 Confidence 46778888999999999875332 233334557888899998888888999999999999875 2 22 233445
4764
4765
4766 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS------QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
4767 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~------s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
4768 ++++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.++
4769 T Consensus 357 ~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l 429 (466)
4770 T 4UAF_B 357 GIIEPLMNLLSA------KDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE-NESVYKASLNLI 429 (466)
4771 T ss_pred CcHHHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHHHH
4772 Confidence 577788888776 3678889999999999862 122333344456778888888766 788999999999
4773
4774
4775 Q NP_000290.2 709 SDMWSSKE 716 (747)
4776 Q Consensus 709 snL~~~~~ 716 (747)
4777 .+++...+
4778 T Consensus 430 ~~l~~~~~ 437 (466)
4779 T 4UAF_B 430 EKYFSVEE 437 (466)
4780 T ss_pred HHHccCCc
4781 Confidence 99887543
4782
4783
4784 No 75
4785 >3L6X_A Catenin delta-1, E-cadherin; p120, catenin, cadherin, E-cadherin, armadillo; HET: SO4; 2.4A {Homo sapiens}
4786 Probab=97.63 E-value=2.7e-08 Score=108.38 Aligned_cols=364 Identities=16% Similarity=0.179 Sum_probs=198.9 Template_Neff=11.000
4787
4788 Q NP_000290.2 263 AIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTG 342 (747)
4789 Q Consensus 263 ~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~ 342 (747)
4790 ..++.+|..+....+. ...+..+.++.++.++...++.++..++.+|..++.........+...++++.|+.++. ..
4791 T Consensus 26 ~~~l~~L~~l~~~~~~--~~~~~~~~l~~li~~L~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~g~i~~Lv~lL~-~~ 102 (584)
4792 T 3L6X_A 26 RGSLASLDSLRKGGPP--PPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLD-HP 102 (584)
4793 T ss_dssp --------------CC--CCCCCCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGG-CS
4794 T ss_pred cCchHHHHHHhcCCCC--CCcccCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCCcHHHHHHHhh-CC
4795 Confidence 3445555555443221 11233467778888887777888999999999988544444444455567888888887 56
4796
4797
4798 Q NP_000290.2 343 NAEIQKQLTGLLWNLSS--TDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMREL 419 (747)
4799 Q Consensus 343 d~eVr~~AL~aLsnLas--~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (747)
4800 ++.++..++.+|.+++. .......+.. ++++.|+.+|... .|+++-..+.++|..
4801 T Consensus 103 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~i~~L~~ll~~~---------------~~~~v~~~a~~~L~~------- 160 (584)
4802 T 3L6X_A 103 KKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKA---------------RDMDLTEVITGTLWN------- 160 (584)
4803 T ss_dssp SHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHC---------------CSHHHHHHHHHHHHH-------
4804 T ss_pred CHHHHHHHHHHHHHHhcCCCHHHHHHHHcCChHHHHHHHHHHc---------------CCHHHHHHHHHHHHH-------
4805 Confidence 67899999999999987 3344444444 7888888888731 134444455555432
4806
4807
4808 Q NP_000290.2 420 LALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEY 499 (747)
4809 Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (747)
4810 |++.+..+..+... .+..|...+........ ...+ +.. .+.
4811 T Consensus 161 --------------L~~~~~~~~~l~~~--~l~~L~~~l~~~~~~~~---~~~~---------------~~~----~~~- 201 (584)
4812 T 3L6X_A 161 --------------LSSHDSIKMEIVDH--ALHALTDEVIIPHSGWE---REPN---------------EDC----KPR- 201 (584)
4813 T ss_dssp --------------HTTSGGGHHHHHHH--THHHCCCCCCHHHHCCC---------------------------------
4814 T ss_pred --------------HhcCHHHHHHHHHH--HHHHHHHhccccCCCCC---CCCC---------------cCC----CCc-
4815 Confidence 11111122222211 22233322221110000 0000 000 000
4816
4817
4818 Q NP_000290.2 500 NARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYH-SDAIRTYLNLMGK-----SKKDATLEACAGALQ 573 (747)
4819 Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve-~G~I~~LL~LL~s-----s~d~eVr~~AL~aL~ 573 (747)
4820 ...+........+|+.|-+. .+......+.+ .++++.|+.++.. ..+..++..++.+|.
4821 T Consensus 202 ~~~~~~v~~~a~~~L~~l~~---------------~~~~~~~~l~~~~g~v~~L~~~l~~~~~~~~~~~~~~~~a~~~L~ 266 (584)
4822 T 3L6X_A 202 HIEWESVLTNTAGCLRNVSS---------------ERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLR 266 (584)
4823 T ss_dssp CCCCHHHHHHHHHHHHHHTS---------------SCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHH
4824 T ss_pred ccChHHHHHHHHHHHHHHhc---------------CCHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCChHHHHHHHHHHH
4825 Confidence 00000111112222222211 00011111223 4667888887762 125667778888888
4826
4827
4828 Q NP_000290.2 574 NLTASKGLMS--------------------SGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRH-----PL 627 (747)
4829 Q Consensus 574 nLs~~s~~~s--------------------~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~-----~e 627 (747)
4830 +++....... .......+.+.++++.|+.++... ++.++..++.+|.+|+.. ..
4831 T Consensus 267 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~~~~~~~~~a~~~L~~L~~~~~~~~~~ 346 (584)
4832 T 3L6X_A 267 NLSYQVHREIPQAERYQEAAPNVANNTGTSPARGYELLFQPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRY 346 (584)
4833 T ss_dssp HHHTTHHHHSTTCCC--------------CCCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHH
4834 T ss_pred HHHhhhhccChhHHHHHHhcCcCCCCCCCCChhhhhHhhChhHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccCCHH
4835 Confidence 8876421000 000122334568888899988875 788999999999999874 22
4836
4837
4838 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA-------SPK 699 (747)
4839 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~-------d~e 699 (747)
4840 . ..+...++++.|+.++.. .+..++..++++|.+|+.. +.....+. .++++.|+.++.... +..
4841 T Consensus 347 ~~~~~~~~~~l~~L~~ll~~------~~~~v~~~a~~~L~~L~~~-~~~~~~l~-~~~l~~L~~~L~~~~~~~~~~~~~~ 418 (584)
4842 T 3L6X_A 347 IRSALRQEKALSAIADLLTN------EHERVVKAASGALRNLAVD-ARNKELIG-KHAIPNLVKNLPGGQQNSSWNFSED 418 (584)
4843 T ss_dssp HHHHHTSHHHHHHHHHGGGC------SCHHHHHHHHHHHHHHHTT-CSCHHHHH-HHHHHHHHHTSSSSSCSGGGTCCHH
4844 T ss_pred HHHHHHHcChHHHHHHHhcC------CCHHHHHHHHHHHHHHhcC-hHHHHHHH-cchHHHHHHcCCCCCCCCCcCCCHH
4845 Confidence 2 233456788888888876 3678899999999999875 44444443 467888888776431 234
4846
4847
4848 Q NP_000290.2 700 AAEAARLLLSDMWS 713 (747)
4849 Q Consensus 700 Vr~aAL~aLsnL~~ 713 (747)
4850 ++..++.+|.+++.
4851 T Consensus 419 ~~~~~l~~L~~l~~ 432 (584)
4852 T 3L6X_A 419 TVISILNTINEVIA 432 (584)
4853 T ss_dssp HHHHHHHHHHHHHT
4854 T ss_pred HHHHHHHHHHHHHh
4855 Confidence 46778888888773
4856
4857
4858 No 76
4859 >4U5L_A deltaIBB-importin-alpha1; TPX2, inhibitor, TRANSPORT PROTEIN; HET: 3D6; 2.53A {Mus musculus}
4860 Probab=97.60 E-value=2.9e-08 Score=98.47 Aligned_cols=367 Identities=14% Similarity=0.181 Sum_probs=226.7 Template_Neff=13.200
4861
4862 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNK 322 (747)
4863 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
4864 ..++.+...+.+.++.++..++..+..+...... ....+...++++.+...+. ..++.++..++.++..++.......
4865 T Consensus 5 ~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~ 84 (426)
4866 T 4U5L_A 5 WSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQT 84 (426)
4867 T ss_dssp CCHHHHHHHHTSSCHHHHHHHHHHHHHHHHCSSCCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHH
4868 T ss_pred ccHHHHHhhccCCCHHHHHHHHHHHHHHHhcCCCccHHHHHHcCcHHHHHHHhccCCChHHHHHHHHHHHHHhCCCHHHH
4869 Confidence 4556667777777888889999999888764322 1222333456777777776 4456788889999988876544333
4870
4871
4872 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDP 400 (747)
4873 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~ 400 (747)
4874 ..+...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++..... +..++
4875 T Consensus 85 ~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----------~~~~~ 152 (426)
4876 T 4U5L_A 85 KAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDL-----------STLAC 152 (426)
4877 T ss_dssp HHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTTCSSCG-----------GGSCH
4878 T ss_pred HHHHhcCcHHHHHHHhc-CCChHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhhCCCC-----------chhhH
4879 Confidence 33344467777888776 5677888999999999887543 2223333 677777777764211 11122
4880
4881
4882 Q NP_000290.2 401 EVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
4883 Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
4884 ++...+..++..- ..............+++..+...++. .+..-...+...|.
4885 T Consensus 153 ~~~~~~~~~l~~l---------------------~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~ 205 (426)
4886 T 4U5L_A 153 GYLRNLTWTLSNL---------------------CRNKNPAPPLDAVEQILPTLVRLLHH------NDPEVLADSCWAIS 205 (426)
4887 T ss_dssp HHHHHHHHHHHHH---------------------TCCCSSCCCHHHHHHHHHHHHHHTTS------SCHHHHHHHHHHHH
4888 T ss_pred HHHHHHHHHHHHH---------------------HcCCCCCCCccHHHHHHHHHHHHHhC------CCHHHHHHHHHHHH
4889 Confidence 2333333222211 11111111111113344444333321 11122222222232
4890
4891
4892 Q NP_000290.2 481 NLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK 560 (747)
4893 Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~ 560 (747)
4894 ++...-. .....+.+.++++.++.++. +.
4895 T Consensus 206 ~l~~~~~--------------------------------------------------~~~~~~~~~~~~~~l~~~l~-~~ 234 (426)
4896 T 4U5L_A 206 YLTDGPN--------------------------------------------------ERIEMVVKKGVVPQLVKLLG-AT 234 (426)
4897 T ss_dssp HHTSSCH--------------------------------------------------HHHHHHHTTTCHHHHHHHHT-CS
4898 T ss_pred HHhhCCc--------------------------------------------------HHHHHHhhcChHHHHHHHhc-CC
4899 Confidence 2221100 00111234567888888887 46
4900
4901
4902 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFP 638 (747)
4903 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~ 638 (747)
4904 ++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. +.. ..+...++++
4905 T Consensus 235 ~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~ 309 (426)
4906 T 4U5L_A 235 ELPIVTPALRAIGNIVTGTDE-----QTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP 309 (426)
4907 T ss_dssp CHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHH
4908 T ss_pred CccHHHHHHHHHHHHhcCCHH-----HHHHHhccchHHHHHHHhcCCChHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHH
4909 Confidence 778888999999999875332 233334567888999999888889999999999999875 222 2334456778
4910
4911
4912 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
4913 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
4914 .+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|.+++.
4915 T Consensus 310 ~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~ 378 (426)
4916 T 4U5L_A 310 FLVGVLSK------ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAK-DTKIIQVILDAISNIFQ 378 (426)
4917 T ss_dssp HHHHHHHS------SCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGSC-CHHHHHHHHHHHHHHHH
4918 T ss_pred HHHHHhcC------CCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCcHHHHHHHhcCC-CHHHHHHHHHHHHHHHH
4919 Confidence 88888876 3678889999999999874 233334455556788888888876 78899999999999976
4920
4921
4922 No 77
4923 >4MZ6_E Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial, Importin; ARM repeat, protein transport, Importin; 1.88A {Mus musculus}
4924 Probab=97.58 E-value=3.4e-08 Score=101.56 Aligned_cols=364 Identities=17% Similarity=0.184 Sum_probs=217.7 Template_Neff=12.800
4925
4926 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
4927 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
4928 +++.+...+.+. ++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++.........
4929 T Consensus 101 ~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 180 (509)
4930 T 4MZ6_E 101 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 180 (509)
4931 T ss_dssp HHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHH
4932 T ss_pred cHHHHHHHhcCCCChHHHHHHHHHHHHHhCCCHHHHHHHHhcChHHHHHHHhcCCChhHHHHHHHHHHHHhCCCHHHHHH
4933 Confidence 455566666543 3678888889988887654443334444567788888888777888999999999888654433333
4934
4935
4936 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAE-----IQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
4937 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~e-----Vr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
4938 +...++++.+...+. ..... ++..++.++..++.......... .++++.+..++..
4939 T Consensus 181 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 243 (509)
4940 T 4MZ6_E 181 VIKHGAIDPLLALLA-VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH---------------- 243 (509)
4941 T ss_dssp HHHTTCHHHHHHHTC-SSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTC----------------
4942 T ss_pred HHHCCcHHHHHHHHh-CCChhhhhHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhC----------------
4943 Confidence 334456677777775 33333 77788888888876432221111 2556666666542
4944
4945
4946 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
4947 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
4948 .++++...+..++..-.... + .....+ --.+++..|...++. .+..-...+..
4949 T Consensus 244 ~~~~v~~~a~~~l~~l~~~~------~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~ 296 (509)
4950 T 4MZ6_E 244 NDPEVLADSCWAISYLTDGP------N--------------ERIEMV-VKKGVVPQLVKLLGA------TELPIVTPALR 296 (509)
4951 T ss_dssp SCHHHHHHHHHHHHHHTSSS------H--------------HHHHHH-HTTTCHHHHHHHHTC------SCHHHHHHHHH
4952 T ss_pred CCHHHHHHHHHHHHHHhcCC------h--------------HHHHHH-hhCChHHHHHHHhcC------CCcchHHHHHH
4953 Confidence 13444444444443211100 0 000000 012233333333321 11112222333
4954
4955
4956 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
4957 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
4958 +|.++.... ......+.+.++++.|..++.
4959 T Consensus 297 ~L~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 326 (509)
4960 T 4MZ6_E 297 AIGNIVTGT--------------------------------------------------DEQTQKVIDAGALAVFPSLLT 326 (509)
4961 T ss_dssp HHHHHTTSC--------------------------------------------------HHHHHHHHHTTGGGGHHHHTT
4962 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHHhCChHHHHHHHhh
4963 Confidence 333322100 001112245567788888887
4964
4965
4966 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGN 634 (747)
4967 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~ 634 (747)
4968 +.++.++..++.+|.+++...+. ....+...++++.|+.++.+.++.++..++.+|.+++.. ... ..+...
4969 T Consensus 327 -~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~ 400 (509)
4970 T 4MZ6_E 327 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC 400 (509)
4971 T ss_dssp -CSSHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHT
4972 T ss_pred -CCCHHHHHHHHHHHHHHhcCCHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhC
4973 Confidence 46778888999999998875332 233334557888888888888888999999999999875 222 233445
4974
4975
4976 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS------QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
4977 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~------s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
4978 ++++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|
4979 T Consensus 401 ~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l 473 (509)
4980 T 4MZ6_E 401 GIIEPLMNLLSA------KDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE-NESVYKASLNLI 473 (509)
4981 T ss_dssp TCHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTHHHHHHHHTTCS-SHHHHHHHHHHH
4982 T ss_pred CCHHHHHHHHhC------CCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHHHH
4983 Confidence 577888888776 3678888999999998862 123333344456788888888776 788999999999
4984
4985
4986 Q NP_000290.2 709 SDMWSSKE 716 (747)
4987 Q Consensus 709 snL~~~~~ 716 (747)
4988 ..+....+
4989 T Consensus 474 ~~l~~~~~ 481 (509)
4990 T 4MZ6_E 474 EKYFSVEE 481 (509)
4991 T ss_dssp HHHCC---
4992 T ss_pred HHHCCCCc
4993 Confidence 99886543
4994
4995
4996 No 78
4997 >5UMZ_B Importin subunit alpha-1, TNRC6A; mRNA decay, miRNA ARM repeat; HET: GOL; 1.9A {Mus musculus}
4998 Probab=97.58 E-value=3.4e-08 Score=101.56 Aligned_cols=364 Identities=17% Similarity=0.184 Sum_probs=219.0 Template_Neff=12.800
4999
5000 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
5001 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
5002 +++.+...+.+. ++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++.........
5003 T Consensus 101 ~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 180 (509)
5004 T 5UMZ_B 101 LIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 180 (509)
5005 T ss_dssp CHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHTCHHHHHH
5006 T ss_pred cHHHHHHHhcCCCChHHHHHHHHHHHHHhCCCHHHHHHHHhcChHHHHHHHhcCCChhHHHHHHHHHHHHhCCCHHHHHH
5007 Confidence 455566666543 3678888889988887654443334444567788888888777888999999999888654433333
5008
5009
5010 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAE-----IQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
5011 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~e-----Vr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
5012 +...++++.+...+. ..... ++..++.++..++.......... .++++.+..++..
5013 T Consensus 181 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---------------- 243 (509)
5014 T 5UMZ_B 181 VIKHGAIDPLLALLA-VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH---------------- 243 (509)
5015 T ss_dssp HHHTTCHHHHHHHTC-SSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTS----------------
5016 T ss_pred HHHCCcHHHHHHHHh-CCChhhhhHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhC----------------
5017 Confidence 334456677777775 33333 77788888888876432221111 2556666666542
5018
5019
5020 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
5021 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
5022 .++++...+..++..-.... + .....+ --.+++..|...++. .+..-...+..
5023 T Consensus 244 ~~~~v~~~a~~~l~~l~~~~------~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~ 296 (509)
5024 T 5UMZ_B 244 NDPEVLADSCWAISYLTDGP------N--------------ERIEMV-VKKGVVPQLVKLLGA------TELPIVTPALR 296 (509)
5025 T ss_dssp SCHHHHHHHHHHHHHHTSSC------H--------------HHHHHH-HTTTCHHHHHHHHTC------SCHHHHHHHHH
5026 T ss_pred CCHHHHHHHHHHHHHHhcCC------h--------------HHHHHH-hhCChHHHHHHHhcC------CCcchHHHHHH
5027 Confidence 13444444444443211100 0 000000 012233333333321 11112222333
5028
5029
5030 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
5031 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
5032 +|.++.... ......+.+.++++.|..++.
5033 T Consensus 297 ~L~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~ 326 (509)
5034 T 5UMZ_B 297 AIGNIVTGT--------------------------------------------------DEQTQKVIDAGALAVFPSLLT 326 (509)
5035 T ss_dssp HHHHHTTSC--------------------------------------------------HHHHHHHHHTTGGGGHHHHTT
5036 T ss_pred HHHHHhcCC--------------------------------------------------HHHHHHHHhCChHHHHHHHhh
5037 Confidence 333322100 001112245567788888887
5038
5039
5040 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGN 634 (747)
5041 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~ 634 (747)
5042 +.++.++..++.+|.+++...+. ....+...++++.|+.++.+.++.++..++.+|.+++.. ... ..+...
5043 T Consensus 327 -~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~ 400 (509)
5044 T 5UMZ_B 327 -NPKTNIQKEATWTMSNITAGRQD-----QIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHC 400 (509)
5045 T ss_dssp -CSSHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHT
5046 T ss_pred -CCCHHHHHHHHHHHHHHhcCCHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhC
5047 Confidence 46778888999999998875332 233334557888888888888888999999999999875 222 233445
5048
5049
5050 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS------QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
5051 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~------s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
5052 ++++.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|
5053 T Consensus 401 ~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l 473 (509)
5054 T 5UMZ_B 401 GIIEPLMNLLSA------KDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHE-NESVYKASLNLI 473 (509)
5055 T ss_dssp TCHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTHHHHHHHHHTCS-CHHHHHHHHHHH
5056 T ss_pred CCHHHHHHHHhC------CCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHcCHHHHHHHHHhCC-CHHHHHHHHHHH
5057 Confidence 577888888776 3678888999999998862 123333344456788888888776 788999999999
5058
5059
5060 Q NP_000290.2 709 SDMWSSKE 716 (747)
5061 Q Consensus 709 snL~~~~~ 716 (747)
5062 ..+....+
5063 T Consensus 474 ~~l~~~~~ 481 (509)
5064 T 5UMZ_B 474 EKYFSVEE 481 (509)
5065 T ss_dssp HHHCCCCC
5066 T ss_pred HHHCCCCc
5067 Confidence 99886543
5068
5069
5070 No 79
5071 >5ZHX_D Rap1 GTPase-GDP dissociation stimulator 1; armadillo GEF chaperone, ONCOPROTEIN; HET: FAR; 3.5A {Homo sapiens}
5072 Probab=97.57 E-value=3.6e-08 Score=99.74 Aligned_cols=332 Identities=20% Similarity=0.193 Sum_probs=197.3 Template_Neff=13.200
5073
5074 Q NP_000290.2 282 QVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTG--NAEIQKQLTGLLWNLSS 359 (747)
5075 Q Consensus 282 ~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~--d~eVr~~AL~aLsnLas 359 (747)
5076 .+...++++.+...+.+.++.++..++.++..++...+.....+...++++.+...+. .. ++.++..++.++..++.
5077 T Consensus 13 ~l~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~-~~~~~~~v~~~a~~~l~~l~~ 91 (487)
5078 T 5ZHX_D 13 PCVDAGLISPLVQLLNSKDQEVLLQTGRALGNICYDSHSLQAQLINMGVIPTLVKLLG-IHCQNAALTEMCLVAFGNLAE 91 (487)
5079 T ss_dssp ---CHHHHHHHHHHTTCSCHHHHHHHHHHHHTTSTTCHHHHHHHHHTTCHHHHHHHHH-HTSSCSHHHHHHHHHHHHHTT
5080 T ss_pred HHhhcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHHc-ccCCCHHHHHHHHHHHHHHHc
5081 Confidence 3444567778888888778889999999999988654443334444567788888886 43 67888899999999887
5082
5083
5084 Q NP_000290.2 360 TDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSAD 438 (747)
5085 Q Consensus 360 ~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (747)
5086 .......+.. ++++.|+.++.... ++++-..+..+|..- ...+
5087 T Consensus 92 ~~~~~~~~~~~~~~~~l~~~l~~~~---------------~~~~~~~a~~~l~~l---------------------~~~~ 135 (487)
5088 T 5ZHX_D 92 LESSKEQFASTNIAEELVKLFKKQI---------------EHDKREMIFEVLAPL---------------------AEND 135 (487)
5089 T ss_dssp SSHHHHHHHHTTHHHHHHHHHHHCC---------------SHHHHHHHHHHHHHH---------------------HTSH
5090 T ss_pred chhHHHHHhhCCHHHHHHHHHHhcc---------------ChHHHHHHHHHHHHH---------------------hcCH
5091 Confidence 6443333333 67777777776431 333333333333211 1111
5092
5093
5094 Q NP_000290.2 439 AGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKS 518 (747)
5095 Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (747)
5096 ..+..+. ..|.++.|+..+... ++.........+..... .+.+..
5097 T Consensus 136 ~~~~~~~-~~~~~~~l~~~l~~~------~~~~~~~~~~~l~~~~~----------------------------~~~~~~ 180 (487)
5098 T 5ZHX_D 136 AIKLQLV-EAGLVECLLEIVQQK------VDSDKEDDITELKTGSD----------------------------LMVLLL 180 (487)
5099 T ss_dssp HHHHHHH-HHTHHHHHHHHHHHT------SSCCCHHHHHHHHHHHH----------------------------HHHHHT
5100 T ss_pred HHHHHHH-HCCHHHHHHHHHHhc------CCCCCHHHHHHHHHHHH----------------------------HHHHHH
5101 Confidence 1111111 123444444433321 11111111111110000 000000
5102
5103
5104 Q NP_000290.2 519 DKMMNNNYDCPLPEEETNPKGSGWLYHSD---AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEK 595 (747)
5105 Q Consensus 519 ~~~~~~~~~~~~~~~~~ni~~~~~lve~G---~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~g 595 (747)
5106 .+ .+. ...+...+ .++.++.++. +.++.++..++.+|.+++.... ....+.+.+
5107 T Consensus 181 ----~~---------~~~---~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~------~~~~~~~~~ 237 (487)
5108 T 5ZHX_D 181 ----LG---------DES---MQKLFEGGKGSVFQRVLSWIP-SNNHQLQLAGALAIANFARNDA------NCIHMVDNG 237 (487)
5109 T ss_dssp ----TS---------HHH---HHHHSSSSSSSHHHHHHTTTT-SSCHHHHHHHHHHHHHHCCSHH------HHHHHHTTT
5110 T ss_pred ----hc---------cHH---HHHHhhCCCchHHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCch------HHHHHHhcC
5111 Confidence 00 000 01112222 6777888887 4677888899999999987432 133345567
5112
5113
5114 Q NP_000290.2 596 GLPQIARLLQ----SGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
5115 Q Consensus 596 iI~~Ll~LL~----s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
5116 +++.++.++. +.+..++..++.+|.+++..... ..+...++++.+..++.+ .++.++..++++|.+++.
5117 T Consensus 238 ~~~~l~~~l~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~ 311 (487)
5118 T 5ZHX_D 238 IVEKLMDLLDRHVEDGNVTVQHAALSALRNLAIPVINKAKMLSAGVTEAVLKFLKS------EMPPVQFKLLGTLRMLID 311 (487)
5119 T ss_dssp HHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHTCSHHHHHHHHHHTHHHHHHTTSSC------CCHHHHHHHHHHHHHHTS
5120 T ss_pred HHHHHHHHHHhcccCCCHHHHHHHHHHHHHhcCChhhHHHHHHcChHHHHHHHHhC------CCHHHHHHHHHHHHHHHh
5121 Confidence 8888888887 56788899999999999876433 233445677888888876 367889999999999987
5122
5123
5124 Q NP_000290.2 671 SQPQLAKQYF-SSSMLNNIINLCRSSASP-KAAEAARLLLSDMWSSK 715 (747)
5125 Q Consensus 671 ~s~e~~~~Lv-e~giL~~Ll~LL~s~~d~-eVr~aAL~aLsnL~~~~ 715 (747)
5126 ..+.....+. ..++++.++.++.+. +. .++..++.+|.+++...
5127 T Consensus 312 ~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~a~~~l~~l~~~~ 357 (487)
5128 T 5ZHX_D 312 AQAEAAEQLGKNVKLVERLVEWCEAK-DHAGVMGESNRLLSALIRHS 357 (487)
5129 T ss_dssp SCHHHHHHHHHCHHHHHHHHHHHTCC-SCCHHHHHHHHHHHHHHHHH
5130 T ss_pred hcHHHHHHhccccCHHHHHHHHHHhc-CchhhHHHHHHHHHHHHHHh
5131 Confidence 5433333333 245678888888765 44 78888999999986544
5132
5133
5134 No 80
5135 >3NOW_A SD10334p; Armadillo Repeat, Hsp90, Myosin, Tetra-tricopeptide; 2.992A {Drosophila melanogaster}
5136 Probab=97.57 E-value=3.6e-08 Score=107.84 Aligned_cols=135 Identities=17% Similarity=0.118 Sum_probs=82.7 Template_Neff=12.800
5137
5138 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
5139 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
5140 ..+++.+...+.+.++.++..++.++..+... .... .....++++.+...+.+.+..++..++.++..+.........
5141 T Consensus 289 ~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~-~~~~-~~~~~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~ 366 (810)
5142 T 3NOW_A 289 EGILQMILAMATTDDELQQRVACECLIAASSK-KDKA-KALCEQGVDILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAA 366 (810)
5143 T ss_dssp TTHHHHHHHHHHSSCHHHHHHHHHHHHHHTTS-HHHH-HTTHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTTTTTTS
5144 T ss_pred cChHHHHHHHccCCCHHHHHHHHHHHHHHhCC-HHHH-HHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHHccCCcccc
5145 Confidence 44556666677777788899999999888764 2111 122235677777777777788888999999888764332111
5146
5147
5148 Q NP_000290.2 324 ET-RRQNGIREAVSLLRR-----TGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVI 380 (747)
5149 Q Consensus 324 ~l-l~~~IL~~Ll~lL~s-----s~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~ 380 (747)
5150 .. ...+.++.+...+.. +.++.++..++.++..++........+.. ++++.+..++.
5151 T Consensus 367 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 431 (810)
5152 T 3NOW_A 367 IRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDLAR 431 (810)
5153 T ss_dssp CCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHH
5154 T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHcCCHHHHHHHHhChHHHHHHHHHHc
5155 Confidence 11 122344445544431 24567888889999888765433333322 46666666665
5156
5157
5158 No 81
5159 >4EV8_A Catenin beta-1; mouse catenin, CELL ADHESION; HET: URE; 1.9A {Mus musculus}
5160 Probab=97.55 E-value=4.1e-08 Score=100.94 Aligned_cols=137 Identities=25% Similarity=0.276 Sum_probs=86.1 Template_Neff=13.100
5161
5162 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR--SPNQNVQQAAAGALRNLVFRSTTN- 321 (747)
5163 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~--s~d~eVr~~AL~aLs~La~~~~~~- 321 (747)
5164 .+++.+...+.+.+..++..++.++..+..........+...+.++.+...+. ..++.++..++.++..++......
5165 T Consensus 267 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~ 346 (538)
5166 T 4EV8_A 267 GLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAE 346 (538)
5167 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCCChH
5168 Confidence 34555666666666778888888888886544433333344556667776665 445677888888888887644321
5169
5170
5171 Q NP_000290.2 322 --KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVII 381 (747)
5172 Q Consensus 322 --~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
5173 .......++++.+...+....++.++..++.++..++........+.. ++++.|..++..
5174 T Consensus 347 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~ 409 (538)
5175 T 4EV8_A 347 MAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVR 409 (538)
5176 T ss_pred HHHHHHHHCCHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHCChHHHHHHHHcC
5177 Confidence 112222356677777775223567888888999888875444433444 677777776653
5178
5179
5180 No 82
5181 >5Z8H_A Adenomatous polyposis coli protein, Peptide; APC, inhibitor, PROTEIN BINDING-INHIBITOR complex; HET: PHQ, GOL; 1.79A {Homo sapiens}
5182 Probab=97.54 E-value=4.4e-08 Score=95.72 Aligned_cols=161 Identities=21% Similarity=0.247 Sum_probs=120.5 Template_Neff=12.500
5183
5184 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK-EKGLPQIARLLQSGN----SDVVRSGASL 618 (747)
5185 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie-~giI~~Ll~LL~s~d----~eVr~~AL~a 618 (747)
5186 .+.++++.|+.++....++.++..++++|.+++...+. ....+.. .++++.++.++...+ ..++..++++
5187 T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 236 (339)
5188 T 5Z8H_A 162 REVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTE-----NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGI 236 (339)
5189 T ss_pred HHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHH-----HHHHHHHhcChHHHHHHHhcCCCCCCCHHHHHHHHHH
5190 Confidence 45678888888887325677888899999999874332 2334455 688888988887543 6788889999
5191
5192
5193 Q NP_000290.2 619 LSNMSR----HPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR 693 (747)
5194 Q Consensus 619 LsnLa~----~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~ 693 (747)
5195 |.+++. .+.. ..+...++++.++.++.. .++.++..++++|.+++...+.....+.+.++++.|..++.
5196 T Consensus 237 l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 310 (339)
5197 T 5Z8H_A 237 LRNVSSLIATNEDHRQILRENNCLQTLLQHLKS------HSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIH 310 (339)
5198 T ss_pred HHHHHHhhccCHHHHHHHHHCCHHHHHHHHHhC------CCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHhh
5199 Confidence 999873 2222 233445678888888866 36778999999999999844666666667788999999988
5200
5201
5202 Q NP_000290.2 694 SSASPKAAEAARLLLSDMWSSKE 716 (747)
5203 Q Consensus 694 s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
5204 +. ++.++..++.+|.+++...+
5205 T Consensus 311 ~~-~~~v~~~a~~~l~~l~~~~~ 332 (339)
5206 T 5Z8H_A 311 SK-HKMIAMGSAAALRNLMANRP 332 (339)
5207 T ss_pred CC-CHHHHHHHHHHHHHHHcCCc
5208 Confidence 76 78899999999999997654
5209
5210
5211 No 83
5212 >3SL9_B Catenin beta-1, B-cell CLL/lymphoma 9; Armadillo repeat, components of the; HET: GOL, EDO, PEG, IMD; 2.2A {Homo sapiens}
5213 Probab=97.53 E-value=4.8e-08 Score=84.82 Aligned_cols=134 Identities=16% Similarity=0.203 Sum_probs=89.6 Template_Neff=12.600
5214
5215 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQL-GGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
5216 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~-~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
5217 .+++.+...+.+.++.++..++.++.++..... ....+... ++++.+..++.. .+..++..++.++.+++.. ....
5218 T Consensus 13 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~-~~~~ 90 (167)
5219 T 3SL9_B 13 RAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA-SRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REGL 90 (167)
5220 T ss_pred CcHHHHHHHhCCCCHHHHHHHHHHHHHHccCHH-HHHHHHhCCchHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-HhHH
5221 Confidence 345566666666677788889999998876543 22223332 377778887776 6677888899999888843 3333
5222
5223
5224 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVII 381 (747)
5225 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~ 381 (747)
5226 ..+...+.++.+..++. ..++.++..++.++.+++........++. ++++.|+.++..
5227 T Consensus 91 ~~~~~~~~i~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 150 (167)
5228 T 3SL9_B 91 LAIFKSGGIPALVKMLG-SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK 150 (167)
5229 T ss_pred HHHHHCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHcCCHhHHHHHHHcCHHHHHHHHhcC
5230 Confidence 33444567778888886 55677888899999998875443333332 677777777654
5231
5232
5233 No 84
5234 >4E4V_A Importin subunit alpha-2; armadillo repeat, karyopherin, importin, nuclear; HET: GOL, DTT; 2.5283A {Homo sapiens}
5235 Probab=97.52 E-value=5e-08 Score=99.91 Aligned_cols=156 Identities=17% Similarity=0.216 Sum_probs=117.7 Template_Neff=12.700
5236
5237 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
5238 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
5239 .++++.++.++. +.++.++..++.+|.+++..... ....+...++++.+..++.+.++.++..++.+|.+++..
5240 T Consensus 206 ~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~ 279 (485)
5241 T 4E4V_A 206 EQILPTLVRLLH-HDDPEVLADTCWAISYLTDGPNE-----RIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTG 279 (485)
5242 T ss_dssp HHHHHHHHHHTT-SCCHHHHHHHHHHHHHHTSSCHH-----HHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTS
5243 T ss_pred hcHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCChH-----HhhHHhhCChHHHHHHHhcCCChHHHHHHHHHHHHHhcC
5244 Confidence 356777888887 46778888999999998875332 223334567888899999888888999999999999876
5245
5246
5247 Q NP_000290.2 626 P-LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
5248 Q Consensus 626 ~-e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
5249 . .. ......++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.|+.++.+. ++.++..
5250 T Consensus 280 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~ 352 (485)
5251 T 4E4V_A 280 TDEQTQVVIDAGALAVFPSLLTN------PKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKA-DFKTQKE 352 (485)
5252 T ss_dssp CHHHHHHHHHTTGGGGHHHHHTC------SSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHS-CHHHHHH
5253 T ss_pred CHHHHHHHHhCChHHHHHHHhcC------CCHHHHHHHHHHHHHHcCCCHHHHHHHHHCCHHHHHHHHHhcC-CHHHHHH
5254 Confidence 2 22 233445678888888876 3678899999999999876555555566667788888888766 7788889
5255
5256
5257 Q NP_000290.2 704 ARLLLSDMWSS 714 (747)
5258 Q Consensus 704 AL~aLsnL~~~ 714 (747)
5259 ++.+|.+++..
5260 T Consensus 353 a~~~l~~l~~~ 363 (485)
5261 T 4E4V_A 353 AVWAVTNYTSG 363 (485)
5262 T ss_dssp HHHHHHHHHHH
5263 T ss_pred HHHHHHHHHhc
5264 Confidence 99999888865
5265
5266
5267 No 85
5268 >1WA5_B GTP-BINDING NUCLEAR PROTEIN RAN, IMPORTIN; NUCLEAR TRANSPORT-COMPLEX, NUCLEAR TRANSPORT, EXPORTIN; HET: GTP; 2.0A {CANIS FAMILIARIS} SCOP: a.118.1.1
5269 Probab=97.52 E-value=5.1e-08 Score=102.06 Aligned_cols=368 Identities=16% Similarity=0.204 Sum_probs=223.8 Template_Neff=12.300
5270
5271 Q NP_000290.2 242 CSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDES-AKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRST 319 (747)
5272 Q Consensus 242 ~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~-~~~~li~~~IL~~Ll~lL~s~d-~eVr~~AL~aLs~La~~~~ 319 (747)
5273 .....++.++..+.+.++.++..++..+..++..... ....+...++++.+...+...+ +.++..++.+|..++....
5274 T Consensus 84 ~~~~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~ 163 (530)
5275 T 1WA5_B 84 QLQQELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTS 163 (530)
5276 T ss_dssp ---CCHHHHHHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCH
5277 T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCCCCCHHHHHHcChHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCH
5278 Confidence 3445566666777777777888888888887653221 1223333457777777776543 6677888899988876443
5279
5280
5281 Q NP_000290.2 320 TNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
5282 Q Consensus 320 ~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
5283 .....+...++++.+...+. ..++.++..++.++..++... .....+.. ++++.|+.++...
5284 T Consensus 164 ~~~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--------------- 227 (530)
5285 T 1WA5_B 164 AQTKVVVDADAVPLFIQLLY-TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSN--------------- 227 (530)
5286 T ss_dssp HHHHHHHHTTCHHHHHHHHH-HCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSC---------------
5287 T ss_pred HHHHHHhcCChHHHHHHHHh-CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHhhCC---------------
5288 Confidence 33333333466777777776 556788899999999988753 23333333 6777777776521
5289
5290
5291 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
5292 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
5293 ++++...+..+|..-... ...........+++..|...+.. .+......+..
5294 T Consensus 228 -~~~v~~~a~~~l~~l~~~---------------------~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~ 279 (530)
5295 T 1WA5_B 228 -KPSLIRTATWTLSNLCRG---------------------KKPQPDWSVVSQALPTLAKLIYS------MDTETLVDACW 279 (530)
5296 T ss_dssp -CHHHHHHHHHHHHHHHCC---------------------SSSCCCHHHHGGGHHHHHHHTTC------CCHHHHHHHHH
5297 T ss_pred -CHHHHHHHHHHHHHHHCC---------------------CCCCCCHHHHhhHHHHHHHHHhc------CCHHHHHHHHH
5298 Confidence 344444444443221100 00000011122334444333221 11111222222
5299
5300
5301 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
5302 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
5303 .|.++... +......+.+.++++.|+.++.
5304 T Consensus 280 ~l~~l~~~--------------------------------------------------~~~~~~~~~~~~~~~~l~~~l~ 309 (530)
5305 T 1WA5_B 280 AISYLSDG--------------------------------------------------PQEAIQAVIDVRIPKRLVELLS 309 (530)
5306 T ss_dssp HHHHHHSS--------------------------------------------------CHHHHHHHHHTTCHHHHHHGGG
5307 T ss_pred HHHHHcCC--------------------------------------------------CHHHHHHHHhCCHHHHHHHHhc
5308 Confidence 22222110 0001112345567778888887
5309
5310
5311 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQ 635 (747)
5312 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~g 635 (747)
5313 ..++.++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++++|.+++... .. ..+...+
5314 T Consensus 310 -~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 383 (530)
5315 T 1WA5_B 310 -HESTLVQTPALRAVGNIVTGNDL-----QTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDAN 383 (530)
5316 T ss_dssp -CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT
5317 T ss_pred -CCChhHHHHHHHHHHHHHhCCHH-----HHHHHHHCChHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCC
5318 Confidence 46777888999999998875332 1223344578888999988888889999999999998762 22 3334456
5319
5320
5321 Q NP_000290.2 636 VFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP---QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
5322 Q Consensus 636 iI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~---e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
5323 +++.|..++.+ .++.++..++.+|.+++.... .....+.+.++++.|..++.+. ++.++..++.+|.+++
5324 T Consensus 384 ~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~l~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~ 456 (530)
5325 T 1WA5_B 384 LIPPLVKLLEV------AEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIA-DNRIIEVTLDALENIL 456 (530)
5326 T ss_dssp CHHHHHHHHHH------SCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTC-CHHHHHHHHHHHHHHH
5327 T ss_pred chHHHHHHHHc------CCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHCCCHHHHHHHccCC-CHHHHHHHHHHHHHHH
5328 Confidence 77888888876 367889999999999987532 2334444557788888888866 7788999999999998
5329
5330
5331 Q NP_000290.2 713 SSKE 716 (747)
5332 Q Consensus 713 ~~~~ 716 (747)
5333 ...+
5334 T Consensus 457 ~~~~ 460 (530)
5335 T 1WA5_B 457 KMGE 460 (530)
5336 T ss_dssp HHHH
5337 T ss_pred HHHH
5338 Confidence 7654
5339
5340
5341 No 86
5342 >1EE4_A KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
5343 Probab=97.51 E-value=5.1e-08 Score=96.57 Aligned_cols=115 Identities=13% Similarity=0.098 Sum_probs=77.4 Template_Neff=13.200
5344
5345 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
5346 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
5347 .+++.+...+.+.++.++..++.++..+....+.....+...++++.+...+.+.++.++..++.++..++.........
5348 T Consensus 87 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 166 (423)
5349 T 1EE4_A 87 DAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDW 166 (423)
5350 T ss_dssp THHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCHHHHHHHHHHHHHHHCCSTTCCCH
5351 T ss_pred ChHHHHHHHHhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCh
5352 Confidence 34556666676777888889999999887654433333444467777888887777888888999998887644222222
5353
5354
5355 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
5356 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
5357 ....++++.+...+. ..++.++..++.++..+...
5358 T Consensus 167 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 201 (423)
5359 T 1EE4_A 167 SVVSQALPTLAKLIY-SMDTETLVDACWAISYLSDG 201 (423)
5360 T ss_dssp HHHGGGHHHHHHHTT-CSCHHHHHHHHHHHHHHTSS
5361 T ss_pred HHHhhHHHHHHHHHH-cCCHHHHHHHHHHHHHHhcC
5362 Confidence 233455666666665 45567777778887777654
5363
5364
5365 No 87
5366 >1EE4_B KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
5367 Probab=97.51 E-value=5.1e-08 Score=96.57 Aligned_cols=115 Identities=13% Similarity=0.098 Sum_probs=77.4 Template_Neff=13.200
5368
5369 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
5370 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
5371 .+++.+...+.+.++.++..++.++..+....+.....+...++++.+...+.+.++.++..++.++..++.........
5372 T Consensus 87 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 166 (423)
5373 T 1EE4_B 87 DAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDW 166 (423)
5374 T ss_dssp THHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCH
5375 T ss_pred ChHHHHHHHHhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCh
5376 Confidence 34556666676777888889999999887654433333444467777888887777888888999998887644222222
5377
5378
5379 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
5380 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
5381 ....++++.+...+. ..++.++..++.++..+...
5382 T Consensus 167 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 201 (423)
5383 T 1EE4_B 167 SVVSQALPTLAKLIY-SMDTETLVDACWAISYLSDG 201 (423)
5384 T ss_dssp HHHGGGHHHHHHHTT-CSCHHHHHHHHHHHHHHHSS
5385 T ss_pred HHHhhHHHHHHHHHH-cCCHHHHHHHHHHHHHHhcC
5386 Confidence 233455666666665 45567777778887777654
5387
5388
5389 No 88
5390 >4I2Z_A Protein UNC-45, Heat shock protein; chaperone, myosin folding, protein filaments; 2.9A {Caenorhabditis elegans}
5391 Probab=97.51 E-value=6.2e-08 Score=114.34 Aligned_cols=431 Identities=14% Similarity=0.098 Sum_probs=219.4 Template_Neff=8.600
5392
5393 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE--T 325 (747)
5394 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~--l 325 (747)
5395 +.++.++.+.+..++..++.+|.......... ..+. ...++.|..++.+.++.++..++..|..+.......... .
5396 T Consensus 443 ~~l~~~~~~~~~~~~~~a~~~l~~~~~~~~~~-~~i~-~~~v~~L~~l~~~~~~~v~~~A~~~L~kL~~~~~~~~~~~~~ 520 (961)
5397 T 4I2Z_A 443 PIMLEMAASQDHLMQGIAAELIVATVSKHERA-INML-KVGIPVLRALYDSEDPTVKVRALVGLCKIGAAGGDDISKATM 520 (961)
5398 T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHTTCCSSSSS-CHHH-HTHHHHHHHHHHCSSHHHHHHHHTTSSCC-------------
5399 T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHcChhHHH-HHHH-HhHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCCcchhhhcc
5400 Confidence 33334455556667777777777554332111 1122 235677777777778889999999999887643321110 1
5401
5402
5403 Q NP_000290.2 326 ---RRQNGIREAVSLLRRT--GNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVIIPFSGWCDGNSNMSREVV 398 (747)
5404 Q Consensus 326 ---l~~~IL~~Ll~lL~ss--~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~~~~~~~~~~~~~~~~~~ 398 (747)
5405 ....+...+..++... .+..++..++..|..+.........+.. ++++.|++++...-+...-| ++
5406 T Consensus 521 ~~~~~~~L~~~~~~~l~~~~~~~~~~~~~A~e~Layls~~~~vke~l~~d~~~l~~L~~ll~~~~~~~~~~-------~~ 593 (961)
5407 T 4I2Z_A 521 KEEAVISLAKTCKKFLLETEKYSVDIRRYACEGLSYLSLDADVKEWIVDDSLLLKALVLLAKKAGALCVYT-------LA 593 (961)
5408 T ss_dssp ----CCHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHHHHGGGGSHH-------HH
5409 T ss_pred chHHHHHHHHHHHHHHhcCcCCChHHHHHHHHHHHHHhcCHHHHHHHhcCHHHHHHHHHHHHHcChhHHHH-------HH
5410 Confidence 0112344444555411 2456888999999999876655555554 68888888887542111111 00
5411
5412
5413 Q NP_000290.2 399 DPEVFFNATGCL-RKRLG--MRELLALVPQRATSSRVNLSSADAGRQTMR--NYSGLIDSLMAYVQNCVAASRCDDKSVE 473 (747)
5414 Q Consensus 399 ~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (747)
5415 ..+-|-+... ++.+. |.+|..+..+.... ...+...+.-....+ --.|.+..|.+.+.. -+....+
5416 T Consensus 594 --~~l~nl~~~~~~~~~~~e~~~l~~~a~~~~~~-~~~~d~~~~v~~r~~~l~~~g~~~~Lv~ll~~------~s~~~r~ 664 (961)
5417 T 4I2Z_A 594 --TIYANLSNAFEKPKVDEEMVKLAQFAKHHVPE-THPKDTEEYVEKRVRALVEEGAVPACVAVSKT------ESKNALE 664 (961)
5418 T ss_dssp --HHHHHHTTCCCCCC----------CCCCSSTT-CCTTSSTTHHHHHHHHHHHSCSHHHHHHTCCC------SCSHHHH
5419 T ss_pred --HHHHHHhcCCCCCCCCHHHHHHHHHHhcCCCC-CCcCCCHHHHHHHHHHHHHCCCHHHHHHHhcC------CCHHHHH
5420 Confidence 0111111100 00000 11222221111110 000111111111111 113445555444432 1233445
5421
5422
5423 Q NP_000290.2 474 NCMCVLHNLSYRLDAEVPTRYRQLEYNARNAY-------TE---KSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWL 543 (747)
5424 Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~l 543 (747)
5425 .+..++++++-.- + .|-.-.+..+-..- ++ .....+..+-.. .-+..+.+...
5426 T Consensus 665 ~~~~~l~~l~~~~--~--~R~~iv~~G~v~~Ll~ll~~~~~~~~~~Aa~ALa~l~~-----~~~p~~~~~~~-------- 727 (961)
5427 T 4I2Z_A 665 LIARSLLAFAEYE--D--LRGRIIAEGGTVLCLRLTKEASGEGKIKAGHAIAKLGA-----KADPMISFPGQ-------- 727 (961)
5428 T ss_dssp HHHHHHHTTSCSS--T--THHHHTTTTHHHHHHHHHHHSCTHHHHHHHHHHHHHSS-----SSCSTTTSTTT--------
5429 T ss_pred HHHHHHHHHhCCH--H--HHHHHHHCchHHHHHHHHhcCChHHHHHHHHHHHHHHc-----cCChhhhcCCc--------
5430 Confidence 5666777776211 1 11110111100000 00 000000000000 00000111111
5431
5432
5433 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNM 622 (747)
5434 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsnL 622 (747)
5435 ...++++.|+.+|..+.+...+..++.+|.+|+..++. ....+.+.++++.|..+|. +.++.++..|+.++.+|
5436 T Consensus 728 ~~~~~i~pLv~lL~~~~~~~~~~eal~ALtnLa~~~~~-----~~~~I~~~~~~~~l~~lL~~~~~~~vr~aA~ell~nL 802 (961)
5437 T 4I2Z_A 728 RAYEVVKPLCDLLHPDVEGKANYDSLLTLTNLASVSDS-----IRGRILKEKAIPKIEEFWFMTDHEHLRAAAAELLLNL 802 (961)
5438 T ss_dssp HHHHTTSHHHHTTSCCSSCTTHHHHHHHHHHHHSSCHH-----HHHHHHHTTCHHHHGGGTSCSSCHHHHHHHHHHHHHS
5439 T ss_pred chhhHHHHHHHHhCCCCChHHHHHHHHHHHHHHcCCHH-----HHHHHHhcChHHHHHHHHhcCCCHHHHHHHHHHHHHH
5440 Confidence 01267899999987334556778899999999986533 3445566788999999888 77889999999999999
5441
5442
5443 Q NP_000290.2 623 SRHPLL-HRVM--GNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSS--SMLNNIINLCRSSAS 697 (747)
5444 Q Consensus 623 a~~~e~-~~ll--~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~--giL~~Ll~LL~s~~d 697 (747)
5445 +.++.. ..+. ..+.+..++.++.+. .+..++..|+.+|..++. .+.....+++. +.+..+..++.+. +
5446 T Consensus 803 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~-----~d~~~~~aA~~aLa~ls~-~~~~~~~i~~~~~~~~~il~~ll~~~-~ 875 (961)
5447 T 4I2Z_A 803 LFFEKFYEETVAPGTDRLKLWVLYSAEV-----EEERLSRASAAGFAILTE-DENACARIMDEIKSWPEVFKDIAMHE-D 875 (961)
5448 T ss_dssp SSSTTSSTTTTSSCCTHHHHHHHHHHSC-----SSSTHHHHHHHHHHHHHT-CHHHHHHHTTTCTTHHHHHHHHHHCS-S
5449 T ss_pred HcCHHHHHhhCCCCCccchhhhHHhccC-----CCHHHHHHHHHHHHHHhC-CHHHHHHHHHHHhchHHHHHHHhhCC-C
5450 Confidence 976544 2221 223444454443331 367888999999999884 46655555553 3466677777666 7
5451
5452
5453 Q NP_000290.2 698 PKAAEAARLLLSDMWS-SKELQGVLRQQG 725 (747)
5454 Q Consensus 698 ~eVr~aAL~aLsnL~~-~~~~~~~~~~~~ 725 (747)
5455 +.++..++.+|.+++. +.++...+-+.|
5456 T Consensus 876 ~~l~~ra~~~L~nl~~~~~~~~~~i~~~g 904 (961)
5457 T 4I2Z_A 876 AETQRRGLMGIANIMHSSNKLCSEIVSSE 904 (961)
5458 T ss_dssp TTHHHHHHHHHTTTSSSCHHHHTCCTTHH
5459 T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHhcc
5460 Confidence 8899999999999965 444444343344
5461
5462
5463 No 89
5464 >5XZX_A Importin subunit alpha-3, Ran-binding protein; nuclear import, TRANSPORT PROTEIN; 3.0A {Homo sapiens}
5465 Probab=97.48 E-value=6.3e-08 Score=95.65 Aligned_cols=360 Identities=17% Similarity=0.182 Sum_probs=211.7 Template_Neff=13.200
5466
5467 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
5468 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
5469 +++.+...+. ..++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++...+.....
5470 T Consensus 46 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 125 (416)
5471 T 5XZX_A 46 ILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDY 125 (416)
5472 T ss_dssp CHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHH
5473 T ss_pred cHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCChHHHHHHHhcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
5474 Confidence 4555666665 456678888888888887654433333334567777888887777888999999999887654333333
5475
5476
5477 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
5478 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
5479 +...+++..+...+....++.++..++.++..++.......... .++++.+..++.. .++++
5480 T Consensus 126 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~~ 189 (416)
5481 T 5XZX_A 126 VISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHH----------------TDVNI 189 (416)
5482 T ss_dssp HHHHTCHHHHTTSCSTTSCHHHHHHHHHHHHHHHHCCSSCCCHHHHHHHHHHHHHHTTC----------------CCHHH
5483 T ss_pred HHHCccHHHHHHhcCCCCCHHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhC----------------CCHHH
5484 Confidence 33345667777776533456778888888888876533211111 1566666666542 13444
5485
5486
5487 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
5488 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
5489 ...+..++..-... .+ .....+ --.+++..+...++. -+..-...+...|.++
5490 T Consensus 190 ~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l 242 (416)
5491 T 5XZX_A 190 LVDTVWALSYLTDA------GN--------------EQIQMV-IDSGIVPHLVPLLSH------QEVKVQTAALRAVGNI 242 (416)
5492 T ss_dssp HHHHHHHHHHHHHH------CH--------------HHHHHH-HHHTCHHHHGGGGGC------SCHHHHHHHHHHHHHH
5493 T ss_pred HHHHHHHHHHHhhc------CH--------------HHHHHH-HHCChHHHHHHHcCC------CCHHHHHHHHHHHHHH
5494 Confidence 44444333221100 00 000000 001334444333321 0111111222222222
5495
5496
5497 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
5498 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
5499 ...- ......+.+.++++.+..++. +.++
5500 T Consensus 243 ~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~ 271 (416)
5501 T 5XZX_A 243 VTGT--------------------------------------------------DEQTQVVLNCDALSHFPALLT-HPKE 271 (416)
5502 T ss_dssp TTSC--------------------------------------------------HHHHHHHHTTTCGGGSHHHHT-CSCH
5503 T ss_pred HcCC--------------------------------------------------HHHHHHHcCcccHHHHHHHhc-CCCH
5504 Confidence 1100 001111234467788888887 4677
5505
5506
5507 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGNQVFPE 639 (747)
5508 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~giI~~ 639 (747)
5509 .++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.. . .. ..+...++++.
5510 T Consensus 272 ~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~ 346 (416)
5511 T 5XZX_A 272 KINKEAVWFLSNITAGNQQ-----QVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPP 346 (416)
5512 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHTTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHH
5513 T ss_pred HHHHHHHHHHHHHhcCCHH-----HHHHHHhCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHCCCHHH
5514 Confidence 8888999999998765332 223334556888888888888888999999999999864 2 11 22334567788
5515
5516
5517 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA----KQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDM 711 (747)
5518 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~----~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL 711 (747)
5519 +..++.+ .++.++..++.+|.+++...+... ..+.+.++++.+..++.+. ++.++..++.+|.++
5520 T Consensus 347 l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~~ 415 (416)
5521 T 5XZX_A 347 FCNLLTV------KDAQVVQVVLDGLSNILKMAEDEAETIGNLIEECGGLEKIEQLQNHE-NEDIYKLAYEIIDQF 415 (416)
5522 T ss_dssp HHTTTTS------SCHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHTTHHHHHHTTCCTT-CHHHHHHHHHHHHHH
5523 T ss_pred HHHHccC------CCHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHcCHHHHHHHHhhCC-cHHHHHHHHHHHHHh
5524 Confidence 8888776 367888899999999987533211 1233345677888888766 778888888887764
5525
5526
5527 No 90
5528 >5MFO_F YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: CA, EDO; 1.3A {synthetic construct}
5529 Probab=97.46 E-value=6.9e-08 Score=85.28 Aligned_cols=134 Identities=25% Similarity=0.287 Sum_probs=89.4 Template_Neff=13.100
5530
5531 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
5532 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
5533 +++.+...+.+.++.++..++..+..++...+.....+...++++.+...+.+.++.++..++.++..++.........+
5534 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 84 (202)
5535 T 5MFO_F 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 84 (202)
5536 T ss_dssp THHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
5537 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
5538 Confidence 34556666666777888889999988876544444444445677888888887778888999999999886544333333
5539
5540
5541 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
5542 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
5543 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
5544 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 140 (202)
5545 T 5MFO_F 85 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 140 (202)
5546 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
5547 T ss_pred HHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhc
5548 Confidence 34456777777776 4566778888888888876422 2222223 55666666554
5549
5550
5551 No 91
5552 >3SL9_E Catenin beta-1, B-cell CLL/lymphoma 9; Armadillo repeat, components of the; HET: PEG, GOL, IMD, EDO; 2.2A {Homo sapiens}
5553 Probab=97.46 E-value=7.2e-08 Score=83.64 Aligned_cols=134 Identities=16% Similarity=0.201 Sum_probs=88.4 Template_Neff=12.600
5554
5555 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLG-GICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
5556 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~-IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
5557 .+++.+...+.+.++.++..++.++.++..... ....+.... +++.+..++.. .+..++..++.++..++.. ....
5558 T Consensus 13 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~-~~~~ 90 (167)
5559 T 3SL9_E 13 RAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA-SRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REGL 90 (167)
5560 T ss_dssp HHHHHHHHHHTCSCHHHHHHHHHHHHHHTTSHH-HHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS-HHHH
5561 T ss_pred CcHHHHHHHhCCCCHHHHHHHHHHHHHHccCHH-HHHHHHhCCchHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-HhHH
5562 Confidence 345556666666667788889999998876543 222233323 77777777776 6677888889999888743 3333
5563
5564
5565 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVII 381 (747)
5566 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~ 381 (747)
5567 ..+...+.++.+..++. ..++.++..++.++.+++.........+. ++++.|++++..
5568 T Consensus 91 ~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 150 (167)
5569 T 3SL9_E 91 LAIFKSGGIPALVKMLG-SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK 150 (167)
5570 T ss_dssp HHHHHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHCTTHHHHHHHTTHHHHHHHHHHH
5571 T ss_pred HHHHHCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHcCCHhHHHHHHHcCHHHHHHHHhcC
5572 Confidence 33444567777888776 55677888899999998875433333332 667777777654
5573
5574
5575 No 92
5576 >3NOW_A SD10334p; Armadillo Repeat, Hsp90, Myosin, Tetra-tricopeptide; 2.992A {Drosophila melanogaster}
5577 Probab=97.46 E-value=7.3e-08 Score=105.35 Aligned_cols=110 Identities=10% Similarity=0.050 Sum_probs=66.2 Template_Neff=12.800
5578
5579 Q NP_000290.2 247 IPKAVQYLSSQ--DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
5580 Q Consensus 247 L~~Ll~lL~ss--d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
5581 +..++..+.+. +..++..++..|..++... .........+.++.+...+.. .+..++..++.++..++........
5582 T Consensus 8 i~~l~~~l~~~~~~~~~r~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~ 86 (810)
5583 T 3NOW_A 8 VKQMMDLTFDLATPIDKRRAAANNLVVLAKEQ-TGAELLYKDHCIAKVASLTKVEKDQDIYVNMVHLVAALCENSVERTK 86 (810)
5584 T ss_dssp HHHHHHHHHSSCCSSHHHHHHHHHHHHHSSCH-HHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHH
5585 T ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHhccc-cccHHHHccccHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCHhHHH
5586 Confidence 33445555554 5778888888888887654 222223334567777777731 5678888999999888765332222
5587
5588
5589 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
5590 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
5591 .......++.+...+. ..++.++..++.++..++
5592 T Consensus 87 ~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~~~ 120 (810)
5593 T 3NOW_A 87 GVLTELGVPWFMRVLD-QKHENCVSTAQFCLQTIL 120 (810)
5594 T ss_dssp HHHHHSCHHHHHHHHH-CCSTTHHHHHHHHHHHHH
5595 T ss_pred HHHHHhcHHHHHHHhc-CCChhHHHHHHHHHHHHH
5596 Confidence 2222334566666665 345556666666666554
5597
5598
5599 No 93
5600 >5MFO_E YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: EDO, CA; 1.3A {synthetic construct}
5601 Probab=97.44 E-value=7.9e-08 Score=84.90 Aligned_cols=134 Identities=25% Similarity=0.287 Sum_probs=89.3 Template_Neff=13.100
5602
5603 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
5604 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
5605 +++.+...+.+.++.++..++..+..++...+.....+...++++.+...+.+.++.++..++.++..++.........+
5606 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 84 (202)
5607 T 5MFO_E 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 84 (202)
5608 T ss_dssp CHHHHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
5609 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHH
5610 Confidence 34556666666777888889999988876544434444445677888888887788889999999999886544333333
5611
5612
5613 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
5614 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
5615 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
5616 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 140 (202)
5617 T 5MFO_E 85 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 140 (202)
5618 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
5619 T ss_pred HHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhc
5620 Confidence 34456777777775 4566778888888888876422 2222223 55666666554
5621
5622
5623 No 94
5624 >4XZR_B Heh1-NLS, Kap60; karyopherins nuclear import ; 2.25A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
5625 Probab=97.44 E-value=8.1e-08 Score=95.04 Aligned_cols=115 Identities=13% Similarity=0.098 Sum_probs=77.3 Template_Neff=13.200
5626
5627 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
5628 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
5629 .+++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++.........
5630 T Consensus 87 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~ 166 (423)
5631 T 4XZR_B 87 DAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDW 166 (423)
5632 T ss_dssp TCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCCHHHHHHHHHHHHHHHCCCTTCCCH
5633 T ss_pred chHHHHHHHHhCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCCh
5634 Confidence 34556666677777888899999999887654433333444467777888887777888888999998887654222222
5635
5636
5637 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
5638 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
5639 ....++++.+...+. ..++.++..++.++..++..
5640 T Consensus 167 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 201 (423)
5641 T 4XZR_B 167 SVVSQALPTLAKLIY-SMDTETLVDACWAISYLSDG 201 (423)
5642 T ss_dssp HHHGGGHHHHHHHTT-CSCHHHHHHHHHHHHHHTSS
5643 T ss_pred HHhccHHHHHHHHhh-CCCHHHHHHHHHHHHHHhcC
5644 Confidence 233346666666665 44566777777777777654
5645
5646
5647 No 95
5648 >3OPB_A SWI5-dependent HO expression protein 4; HEAT and ARM fold, Myosin; 2.9A {Saccharomyces cerevisiae}
5649 Probab=97.44 E-value=9.1e-08 Score=108.58 Aligned_cols=168 Identities=20% Similarity=0.242 Sum_probs=116.3 Template_Neff=10.500
5650
5651 Q NP_000290.2 546 SDAIRTYLNLMGKSK-------------KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVV 612 (747)
5652 Q Consensus 546 ~G~I~~LL~LL~ss~-------------d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr 612 (747)
5653 .++++.|+.++.... +..++..++.+|.+++.......+......+...++++.|..++.+.++.++
5654 T Consensus 544 ~~~l~~L~~lL~~~~~~~~~~~~~~~~~~~~~~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~~~~~v~ 623 (778)
5655 T 3OPB_A 544 LNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQ 623 (778)
5656 T ss_dssp TTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHH
5657 T ss_pred cchHHHHHHHCCCCCCCCCCCCCChhhccHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHhcccHHHHHHHHhhCCCHHHH
5658 Confidence 456677777765211 4567778999999988752200000011222224688888888888888899
5659
5660
5661 Q NP_000290.2 613 RSGASLLSNMSRHPLL--HRVMGN------QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFS-SS 683 (747)
5662 Q Consensus 613 ~~AL~aLsnLa~~~e~--~~ll~~------giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve-~g 683 (747)
5663 ..++.+|++++..... ..++.. ++++.|+.++.. .+..++..++++|++++...+.....++. .+
5664 T Consensus 624 ~~a~~~L~~L~~~~~~~~~~~~~~~~~~~~~~l~~L~~ll~~------~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~ 697 (778)
5665 T 3OPB_A 624 RSTLELISNMMSHPLTIAAKFFNLENPQSLRNFNILVKLLQL------SDVESQRAVAAIFANIATTIPLIAKELLTKKE 697 (778)
5666 T ss_dssp HHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHCHHHHHHHTTCHH
5667 T ss_pred HHHHHHHHHHhcChhHHHHHhcCCCChhHHHhHHHHHHHhcC------CCHHHHHHHHHHHHHHHccCHHHHHHHhcCcc
5668 Confidence 9999999999987432 233332 678888888876 36789999999999997655554444443 67
5669
5670
5671 Q NP_000290.2 684 MLNNIINLCRSS-ASPKAAEAARLLLSDMWSSKELQG 719 (747)
5672 Q Consensus 684 iL~~Ll~LL~s~-~d~eVr~aAL~aLsnL~~~~~~~~ 719 (747)
5673 +++.|+.++.+. .+..++..++++|.+++...+...
5674 T Consensus 698 ~i~~L~~~L~~~~~~~~l~~~a~~aL~~L~~~~~~~~ 734 (778)
5675 T 3OPB_A 698 LIENAIQVFADQIDDIELRQRLLMLFFGLFEVIPDNG 734 (778)
5676 T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTCCSTT
5677 T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhCCcCC
5678 Confidence 889999998862 167789999999999997766544
5679
5680
5681 No 96
5682 >4I2W_A Protein UNC-45, Heat shock 70; chaperone, myosin folding, protein filaments; 3.6A {Caenorhabditis elegans}
5683 Probab=97.43 E-value=1e-07 Score=112.49 Aligned_cols=433 Identities=14% Similarity=0.102 Sum_probs=221.5 Template_Neff=8.600
5684
5685 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE-- 324 (747)
5686 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~-- 324 (747)
5687 ++.++.++.+.+..++..++.+|..+....... ..+. ...++.|..++.+.++.++..++..|..+..........
5688 T Consensus 442 ~~~l~~l~~~~~~~~~~~a~~~l~~~~~~~~~~-~~i~-~~~v~~L~~l~~~~~~~v~~~A~~~L~kL~~~~~~~~~~~~ 519 (961)
5689 T 4I2W_A 442 TPIMLEMAASQDHLMQGIAAELIVATVSKHERA-INML-KVGIPVLRALYDSEDPTVKVRALVGLCKIGAAGGDDISKAT 519 (961)
5690 T ss_dssp HHHHHHHHHSSCHHHHHTTTTTTTTTCCSCSSS-HHHH-HHHHHHHHHHHHCSCHHHHHHHHTTSSSCCC----------
5691 T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHcChhHHH-HHHH-HhHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCCcchhhhc
5692 Confidence 333334455556667777777777554332111 1122 235677777777778889999999999887543321100
5693
5694
5695 Q NP_000290.2 325 T---RRQNGIREAVSLLRRT--GNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
5696 Q Consensus 325 l---l~~~IL~~Ll~lL~ss--~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
5697 . ....+...+..++... .+..++..++..|..+.........+.. .+++.|++++...-+...-|-
5698 T Consensus 520 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~AvegLayLs~~~~vke~l~~d~~~l~~L~~ll~~~~~~~~~~~------- 592 (961)
5699 T 4I2W_A 520 MKEEAVISLAKTCKKFLLETEKYSVDIRRYACEGLSYLSLDADVKEWIVDDSLLLKALVLLAKKAGALCVYTL------- 592 (961)
5700 T ss_dssp --CCCTTHHHHHHHHHHHCCSSSCHHHHHHHHHHHHHTCSSHHHHHHHHHCHHHHHHHHHHHHHHGGGSHHHH-------
5701 T ss_pred cchHHHHHHHHHHHHHHhcCcCCChHHHHHHHHHHHHHhcCHHHHHHHhcCHHHHHHHHHHHHHcChhHHHHH-------
5702 Confidence 1 0112344455555411 2456888999999999876655555554 688889888875422111111
5703
5704
5705 Q NP_000290.2 398 VDPEVFFNATGCL-RKRL--GMRELLALVPQRATSSRVNLSSADAGRQTMRN--YSGLIDSLMAYVQNCVAASRCDDKSV 472 (747)
5706 Q Consensus 398 ~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (747)
5707 + ..+-|-+... ++.+ .|.+|..+..+..... ..+...+.-....+. -.|.+..|.+.+.. -+....
5708 T Consensus 593 ~--~~l~nl~~~~~~~~~~~e~~~l~~~a~~~~~~~-~~~d~~~~v~~r~~~l~~~g~~~~Lv~ll~~------~s~~~r 663 (961)
5709 T 4I2W_A 593 A--TIYANLSNAFEKPKVDEEMVKLAQFAKHHVPET-HPKDTEEYVEKRVRALVEEGAVPACVAVSKT------ESKNAL 663 (961)
5710 T ss_dssp H--HHHHHTTTCCCCCC----------CCCCCSTTC-TTTTSSTTHHHHHHHHHHSSSSHHHHHTTCC------CCSHHH
5711 T ss_pred H--HHHHHHhcCCCCCCCCHHHHHHHHHHhcCCCCC-CcCCCHHHHHHHHHHHHHCCCHHHHHHHhcC------CCHHHH
5712 Confidence 0 0111111110 0000 0122222211111110 011111111111111 12444444444332 122334
5713
5714
5715 Q NP_000290.2 473 ENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAY---T-E------KSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGW 542 (747)
5716 Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~ 542 (747)
5717 +.+..+|++++-.- +. |-.-.+..+-..- . + .....+..+-.. .-+..+.+...
5718 T Consensus 664 ~~~~~~l~~l~~~~--~~--R~~ivq~g~~~~Ll~ll~~~~~~~~~~Aa~ALa~l~~-----~~~p~~~~~~~------- 727 (961)
5719 T 4I2W_A 664 ELIARSLLAFAEYE--DL--RGRIIAEGGTVLCLRLTKEASGEGKIKAGHAIAKLGA-----KADPMISFPGQ------- 727 (961)
5720 T ss_dssp HHHHHHHHTTSSSS--TT--TTTTTTSSHHHHHHHHHHHSTTHHHHHHHHHHHTTSS-----SSCGGGTSTTT-------
5721 T ss_pred HHHHHHHHHHhCCH--HH--HHHHHHCchHHHHHHHHhcCChHHHHHHHHHHHHHHc-----cCChhhhcCCc-------
5722 Confidence 55566777776211 11 1000001100000 0 0 000000000000 00000111111
5723
5724
5725 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSN 621 (747)
5726 Q Consensus 543 lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsn 621 (747)
5727 ...++++.|+.+|..+.+...+..++.+|.+|+..++. ....+.+.++++.|..+|. +.++.++..|+.++.+
5728 T Consensus 728 -~~~~~i~pLv~lL~~~~~~~~~~eal~ALtnLa~~~~~-----~~~~I~~~~~~~~l~~lL~~~~~~~vr~aA~ell~n 801 (961)
5729 T 4I2W_A 728 -RAYEVVKPLCDLLHPDVEGKANYDSLLTLTNLASVSDS-----IRGRILKEKAIPKIEEFWFMTDHEHLRAAAAELLLN 801 (961)
5730 T ss_dssp -HHHHTTSGGGTSSSCCSSCTTTTTTHHHHHHHSSSCHH-----HHHHHHHTTCHHHHTTSSSCSTTHHHHHHHHHHHHT
5731 T ss_pred -chhhHHHHHHHHhCCCCChHHHHHHHHHHHHHHcCCHH-----HHHHHHhcChHHHHHHHHhcCCCHHHHHHHHHHHHH
5732 Confidence 11267899999987334556778899999999986533 3445556788899998888 7788999999999999
5733
5734
5735 Q NP_000290.2 622 MSRHPLL-HRVM--GNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSS--SMLNNIINLCRSSA 696 (747)
5736 Q Consensus 622 La~~~e~-~~ll--~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~--giL~~Ll~LL~s~~ 696 (747)
5737 |+.++.. ..+. ..+.+..++.++.+. .++.++..|+.+|+.++. .+.....+++. +.+..|..++.+.
5738 T Consensus 802 L~~~~~~~~~~~~~~~~~~~ll~~l~~~~-----~d~~~~~aA~~aLa~l~~-~~~~~~~i~~~~~~~~~~l~~ll~~~- 874 (961)
5739 T 4I2W_A 802 LLFFEKFYEETVAPGTDRLKLWVLYSAEV-----EEERLSRASAAGFAILTE-DENACARIMDEIKSWPEVFKDIAMHE- 874 (961)
5740 T ss_dssp TSSSSSSSTTTSSSCSSCHHHHHHHHHCC-----SSSTHHHHHHHHHHHHHS-SHHHHHHTGGGCTTHHHHHHHHHHCS-
5741 T ss_pred HHcCHHHHHhhCCCCCccchhhhHHhccC-----CCHHHHHHHHHHHHHHhC-CHHHHHHHHHHHhchHHHHHHHhhCC-
5742 Confidence 9976544 2221 223444444443331 357888999999999884 45555555553 3466677777666
5743
5744
5745 Q NP_000290.2 697 SPKAAEAARLLLSDMWS-SKELQGVLRQQGF 726 (747)
5746 Q Consensus 697 d~eVr~aAL~aLsnL~~-~~~~~~~~~~~~~ 726 (747)
5747 ++.++..++.+|.+++. +.+....+.+.|.
5748 T Consensus 875 ~~~l~~ra~~~l~nl~~~~~~~~~~~~~~g~ 905 (961)
5749 T 4I2W_A 875 DAETQRRGLMGIANIMHSSNKLCSEIVSSEV 905 (961)
5750 T ss_dssp STTHHHHHHHHTHHHHSSCSHHHHCCSSHHH
5751 T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHhccH
5752 Confidence 78899999999999965 4444443444443
5753
5754
5755 No 97
5756 >3TT9_A Plakophilin-2; CELL ADHESION; HET: GOL; 1.55A {Homo sapiens}
5757 Probab=97.42 E-value=9.1e-08 Score=88.50 Aligned_cols=221 Identities=45% Similarity=0.773 Sum_probs=134.5 Template_Neff=12.300
5758
5759 Q NP_000290.2 245 LTIPKAVQYLSSQD--EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNK 322 (747)
5760 Q Consensus 245 ~iL~~Ll~lL~ssd--~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
5761 ..++.++..+...+ ..++..++.++.+++.........+...++++.+..++...+..++..++.+|.+++.......
5762 T Consensus 8 ~~i~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~ 87 (233)
5763 T 3TT9_A 8 MTLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNK 87 (233)
5764 T ss_dssp CCHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHH
5765 T ss_pred hHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHccCHHHHHHHHHcchHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCcHH
5766 Confidence 34556666666544 6788888899988876444444445555678888888877777888999999999886444444
5767
5768
5769 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPE 401 (747)
5770 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~ 401 (747)
5771 ..+...+.++.++.++....+..++..++.++.+++........+.. +++..+..++.... .+-.....+.....+++
5772 T Consensus 88 ~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~ 166 (233)
5773 T 3TT9_A 88 LEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKLKNLMITEALLTLTENIIIPFS-GWPEGDYPKANGLLDFD 166 (233)
5774 T ss_dssp HHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGGHHHHHHHHHHHHCCCCCHHHH-CCCGGGCCCCCTTCCHH
5775 T ss_pred HHHHHcccHHHHHHHHhhCCCHHHHHHHHHHHHHHccCHHHHHHhhhhcHHHHHHHHHhhcc-CCCCCCCCcccCCCcHH
5776 Confidence 44445567777887775234567888999999999875544444444 66666666665432 11111222222334566
5777
5778
5779 Q NP_000290.2 402 VFFNATGCLRKRLGMRELLALVPQRATSSRVNLSS-ADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLH 480 (747)
5780 Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (747)
5781 +...+.++|.. +.. .+..++.+....++++.|...++....-...+.+-.+++..+|.
5782 T Consensus 167 ~~~~a~~~l~~---------------------l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~L~ 225 (233)
5783 T 3TT9_A 167 IFYNVTGCLRN---------------------MSSAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILH 225 (233)
5784 T ss_dssp HHHHHHHHHHH---------------------HTTSCHHHHHHHHTSTTHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
5785 T ss_pred HHHHHHHHHHH---------------------HHhcCHHHHHHHHHcccHHHHHHHHHHcccccCCCChHHHHHHHHHHH
5786 Confidence 65555555432 111 22334444444455666666554421101115567788999999
5787
5788
5789 Q NP_000290.2 481 NLSYRLD 487 (747)
5790 Q Consensus 481 ~~~~~~~ 487 (747)
5791 ||+++.+
5792 T Consensus 226 ~l~~~~~ 232 (233)
5793 T 3TT9_A 226 NLSYQLE 232 (233)
5794 T ss_dssp HHCCCCC
5795 T ss_pred Hhhhccc
5796 Confidence 9987654
5797
5798
5799 No 98
5800 >2Z6H_A Catenin beta-1; Beta-Catenin, C-terminal Domain, Activator, Cell; 2.2A {Homo sapiens}
5801 Probab=97.42 E-value=9.4e-08 Score=103.88 Aligned_cols=378 Identities=17% Similarity=0.155 Sum_probs=229.8 Template_Neff=11.700
5802
5803 Q NP_000290.2 241 ECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRST 319 (747)
5804 Q Consensus 241 ~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~ 319 (747)
5805 +....+++.+...+.+.++.++..++.++..+..............+++..+...+. ..+..++..++.+|..++....
5806 T Consensus 10 ~~~~~~i~~L~~~l~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~ 89 (644)
5807 T 2Z6H_A 10 ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHRE 89 (644)
5808 T ss_pred HHhCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCcHHHHHHHhCCChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCHH
5809 Confidence 344566777888888778889999999999887653222111111346666777666 4566788888888888865432
5810
5811
5812 Q NP_000290.2 320 TNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELK-EELIA-DALPVLADRVIIPFSGWCDGNSNMSREV 397 (747)
5813 Q Consensus 320 ~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~-~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~ 397 (747)
5814 ....+...+.++.+...+. ..++.++..++.++..++...... ..+.. ++++.|+.++...
5815 T Consensus 90 -~~~~~~~~~~i~~L~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~--------------- 152 (644)
5816 T 2Z6H_A 90 -GLLAIFKSGGIPALVKMLG-SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT--------------- 152 (644)
5817 T ss_pred -HHHHHHHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHhcCC---------------
5818 Confidence 2223333467777888876 556788889999999988653322 22222 6677777766531
5819
5820
5821 Q NP_000290.2 398 VDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMC 477 (747)
5822 Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (747)
5823 ++++...+..+|..-.... ...+..... .++++.|...+... .+.+....++.
5824 T Consensus 153 -~~~~~~~a~~~L~~l~~~~--------------------~~~~~~~~~-~~~~~~L~~~l~~~-----~~~~~~~~a~~ 205 (644)
5825 T 2Z6H_A 153 -NVKFLAITTDCLQILAYGN--------------------QESKLIILA-SGGPQALVNIMRTY-----TYEKLLWTTSR 205 (644)
5826 T ss_pred -CHHHHHHHHHHHHHHhcCC--------------------HHHHHHHHH-CCcHHHHHHHhcCC-----CCHHHHHHHHH
5827 Confidence 3344444444443211000 000111111 23444444444321 12222233333
5828
5829
5830 Q NP_000290.2 478 VLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMG 557 (747)
5831 Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ 557 (747)
5832 +|.+++..- .....+.+.++++.|+.++.
5833 T Consensus 206 ~L~~l~~~~---------------------------------------------------~~~~~~~~~~~l~~l~~~l~ 234 (644)
5834 T 2Z6H_A 206 VLKVLSVCS---------------------------------------------------SNKPAIVEAGGMQALGLHLT 234 (644)
5835 T ss_pred HHHHHccCh---------------------------------------------------HHHHHHHHCCHHHHHHHHhc
5836 Confidence 333332110 00012345667888888887
5837
5838
5839 Q NP_000290.2 558 KSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQ 635 (747)
5840 Q Consensus 558 ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~g 635 (747)
5841 ..+..++..++++|.+++..... ... ..++++.|+.++.+.+..++..++.+|.+++.. ... ..+...+
5842 T Consensus 235 -~~~~~~~~~a~~~L~~l~~~~~~------~~~--~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~ 305 (644)
5843 T 2Z6H_A 235 -DPSQRLVQNCLWTLRNLSDAATK------QEG--MEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVG 305 (644)
5844 T ss_pred -CCCHHHHHHHHHHHHHHhcCCCC------HHH--HCchHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCC
5845 Confidence 46778888999999999875321 111 256788888888888888999999999999865 222 2334556
5846
5847
5848 Q NP_000290.2 636 VFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL---AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
5849 Q Consensus 636 iI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~---~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
5850 +++.++..+... ..+..++..++.+|.+++...+.. ...+...++++.|+.++....+..++..++.+|.+++
5851 T Consensus 306 ~l~~L~~~l~~~----~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~v~~~a~~~L~~l~ 381 (644)
5852 T 2Z6H_A 306 GIEALVRTVLRA----GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLA 381 (644)
5853 T ss_pred HHHHHHHHHhcC----CCCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHh
5854 Confidence 777777776521 035678889999999998753322 2333344677888888875435678899999999999
5855
5856
5857 Q NP_000290.2 713 SSKELQGVLRQQGF 726 (747)
5858 Q Consensus 713 ~~~~~~~~~~~~~~ 726 (747)
5859 ...+.+..+.+.|.
5860 T Consensus 382 ~~~~~~~~l~~~~~ 395 (644)
5861 T 2Z6H_A 382 LCPANHAPLREQGA 395 (644)
5862 T ss_pred cCHHHHHHHHHCCc
5863 Confidence 87776655555443
5864
5865
5866 No 99
5867 >4U2X_E eVP24, KPNA5C; eVP24, importin alpha6, immune antagonist; 3.153A {Zaire ebolavirus}
5868 Probab=97.42 E-value=9.4e-08 Score=83.77 Aligned_cols=116 Identities=17% Similarity=0.149 Sum_probs=80.4 Template_Neff=12.500
5869
5870 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKLE 324 (747)
5871 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~~ 324 (747)
5872 +++.+..++.+.++.++..++.++.++....+.....+...++++.+...+.+.+..++..++.++.+++.. .......
5873 T Consensus 9 ~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 88 (175)
5874 T 4U2X_E 9 ALPCLLHLLSSPKESIRKEACWTVSNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRY 88 (175)
5875 T ss_dssp SSHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHH
5876 T ss_pred hHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCChHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCHHHHHH
5877 Confidence 455566666667788889999999998865443333444456777888887777778888899999988753 2222223
5878
5879
5880 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
5881 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
5882 +...+.++.+...+. ..++.++..++.++.+++....
5883 T Consensus 89 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~ 125 (175)
5884 T 4U2X_E 89 LVALGCIKPLCDLLT-VMDSKIVQVALNGLENILRLGE 125 (175)
5885 T ss_dssp HHHHTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHHHHH
5886 T ss_pred HHHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHhhcH
5887 Confidence 333456777777776 5567788888899888887543
5888
5889
5890 No 100
5891 >4RV1_D Engineered Protein OR497; STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE; 2.573A {SYNTHETIC CONSTRUCT}
5892 Probab=97.42 E-value=9.1e-08 Score=94.28 Aligned_cols=363 Identities=20% Similarity=0.249 Sum_probs=217.4 Template_Neff=13.300
5893
5894 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
5895 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
5896 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.++.++..++.++..+...........
5897 T Consensus 45 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 124 (420)
5898 T 4RV1_D 45 GVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 124 (420)
5899 T ss_dssp HHHHHHHTTSCSCSSSHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
5900 T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChHHHHHH
5901 Confidence 45556666666777888899999988876543333333334567777777777778888899999988876543333333
5902
5903
5904 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
5905 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
5906 ...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.+..++... ++++-
5907 T Consensus 125 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~~~ 187 (420)
5908 T 4RV1_D 125 VDAGGVEVLVKLLT-STDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST----------------DSEVQ 187 (420)
5909 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS----------------SHHHH
5910 T ss_pred HHcCHHHHHHHHHh-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhcCC----------------CHHHH
5911 Confidence 33456777777776 55677888899999988864322 222222 5566666655421 23332
5912
5913
5914 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
5915 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
5916 ..+..++.. +.. ........-.-.++++.+...+++ -+..-...+...|.++.
5917 T Consensus 188 ~~~~~~l~~---------l~~------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~ 240 (420)
5918 T 4RV1_D 188 KEAARALAN---------IAS------------GPTSAIKAIVDAGGVEVLVKLLTS------TDSEVQKEAARALANIA 240 (420)
5919 T ss_dssp HHHHHHHHH---------HHT------------SCHHHHHHHHTTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHH
5920 T ss_pred HHHHHHHHH---------HhC------------CCHHHHHHHHHCCHHHHHHHHhhC------CCHHHHHHHHHHHHHHh
5921 Confidence 222222221 100 000000000001233333322221 01111122222222221
5922
5923
5924 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
5925 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
5926 ... ......+.+.++++.++..+. +.++.
5927 T Consensus 241 ~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~~ 269 (420)
5928 T 4RV1_D 241 SGP--------------------------------------------------DEAIKAIVDAGGVEVLVKLLT-STDSE 269 (420)
5929 T ss_dssp TSC--------------------------------------------------HHHHHHHHHTTHHHHHHHHTT-CSSHH
5930 T ss_pred CCC--------------------------------------------------HHHHHHHhhccHHHHHHHHhC-CCCHH
5931 Confidence 100 001111234567777888887 46677
5932
5933
5934 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFPEVT 641 (747)
5935 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~~Ll 641 (747)
5936 ++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++... .. ......++++.+.
5937 T Consensus 270 ~~~~~~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~ 344 (420)
5938 T 4RV1_D 270 VQKEAARALANIASGPDE-----AIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLV 344 (420)
5939 T ss_dssp HHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHH
5940 T ss_pred HHHHHHHHHHHHHcCCHH-----HHHHHHHCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChHHHHHHHHHCCHHHHHH
5941 Confidence 888899999998875332 1223344578888888888888889999999999998763 22 2333446777788
5942
5943
5944 Q NP_000290.2 642 RLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
5945 Q Consensus 642 ~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
5946 .++.+ .++.++..++.+|.+++...+.....+.+.++++.+..++.+. ++.++..++.+|..+....
5947 T Consensus 345 ~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~~ 411 (420)
5948 T 4RV1_D 345 KLLTS------TDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTST-DSEVQKEAQRALENIKSGG 411 (420)
5949 T ss_dssp HHTTC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHHHTS
5950 T ss_pred HHhCC------CCHHHHHHHHHHHHHHHcCChhHHHHHHhccHHHHHHHHcCCC-CHHHHHHHHHHHHhhccCC
5951 Confidence 77776 3678899999999999876444444455556788888888766 7789999999999887644
5952
5953
5954 No 101
5955 >4BQK_A IMPORTIN SUBUNIT ALPHA-1A, T-DNA BORDER; TRANSPORT PROTEIN, HYDROLASE, NUCLEAR LOCALIZATION; HET: PEG; 1.997A {ORYZA SATIVA}
5956 Probab=97.41 E-value=9.4e-08 Score=96.14 Aligned_cols=158 Identities=18% Similarity=0.251 Sum_probs=116.4 Template_Neff=13.000
5957
5958 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
5959 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
5960 ..++++.|+.++. +.++.++..++.+|.+++...+. ....+...++++.+..++.+.++.++..++.+|.+++.
5961 T Consensus 170 ~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~ 243 (456)
5962 T 4BQK_A 170 TRPALPALARLIH-SNDEEVLTDACWALSYLSDGTND-----KIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVT 243 (456)
5963 T ss_dssp HTTHHHHHHHHTT-CCCHHHHHHHHHHHHHHTSSSHH-----HHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTT
5964 T ss_pred HHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCChH-----HHHHHHHCChHHHHHHHHhCCCHHHHHHHHHHHHHHHc
5965 Confidence 4456777888887 46778888899999998865332 22333456788889999888888899999999999987
5966
5967
5968 Q NP_000290.2 625 HPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
5969 Q Consensus 625 ~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
5970 ... . ..+...++++.+..++... .++.++..++.+|.+++...+.....+...++++.|..++.+. ++.++.
5971 T Consensus 244 ~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~ 317 (456)
5972 T 4BQK_A 244 GDDAQTQCIIDHQALPCLLSLLTQN-----LKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTA-EFDIKK 317 (456)
5973 T ss_dssp SCHHHHHHHHTTTHHHHHHHHHHSC-----CCHHHHHHHHHHHHHHHTSCHHHHHHHHHHTCHHHHHHHHHHS-CHHHHH
5974 T ss_pred CCHHHHHHHHHCChHHHHHHHHHcC-----CCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhhcC-CHHHHH
5975 Confidence 632 2 2334446777888877652 2577889999999999876555555555666788888888766 778888
5976
5977
5978 Q NP_000290.2 703 AARLLLSDMWSS 714 (747)
5979 Q Consensus 703 aAL~aLsnL~~~ 714 (747)
5980 .++.+|.+++..
5981 T Consensus 318 ~a~~~l~~l~~~ 329 (456)
5982 T 4BQK_A 318 EAAWAISNATSG 329 (456)
5983 T ss_dssp HHHHHHHHHHHH
5984 T ss_pred HHHHHHHHHHcC
5985 Confidence 999999988863
5986
5987
5988 No 102
5989 >5TBK_C Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
5990 Probab=97.41 E-value=1e-07 Score=99.66 Aligned_cols=160 Identities=15% Similarity=0.207 Sum_probs=115.0 Template_Neff=12.200
5991
5992 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
5993 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
5994 .+.++++.|+.++....+..++..++.+|.+++..... ........++++.+..++.+.++.++..++.+|.+++
5995 T Consensus 196 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~ 270 (521)
5996 T 5TBK_C 196 ISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDP-----PPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLT 270 (521)
5997 T ss_dssp HHTTCHHHHHTTCCTTSCHHHHHHHHHHHHHHHCCCSS-----CCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHH
5998 T ss_pred HHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCC-----CCCHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHh
5999 Confidence 45567788888886323446778899999998865321 1112223567888888888888889999999999998
6000
6001
6002 Q NP_000290.2 624 RH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
6003 Q Consensus 624 ~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
6004 .. ... ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.+..++.+. ++.++
6005 T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~ 343 (521)
6006 T 5TBK_C 271 DAGNEQIQMVIDSGIVPHLVPLLSH------QEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHP-KEKIN 343 (521)
6007 T ss_dssp HHCHHHHHHHHHTTCHHHHGGGGGC------SSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCGGGHHHHHTCS-CHHHH
6008 T ss_pred ccChHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCHHHhHHHHhhCC-CHHHH
6009 Confidence 76 222 233445677788888765 3677888999999999876444444555557788888888766 78889
6010
6011
6012 Q NP_000290.2 702 EAARLLLSDMWSSK 715 (747)
6013 Q Consensus 702 ~aAL~aLsnL~~~~ 715 (747)
6014 ..++.+|.+++...
6015 T Consensus 344 ~~a~~~l~~l~~~~ 357 (521)
6016 T 5TBK_C 344 KEAVWFLSNITAGN 357 (521)
6017 T ss_dssp HHHHHHHHHHTTSC
6018 T ss_pred HHHHHHHHHHhCCC
6019 Confidence 99999999988653
6020
6021
6022 No 103
6023 >5TBK_D Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
6024 Probab=97.41 E-value=1e-07 Score=99.66 Aligned_cols=160 Identities=15% Similarity=0.207 Sum_probs=115.0 Template_Neff=12.200
6025
6026 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
6027 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
6028 .+.++++.|+.++....+..++..++.+|.+++..... ........++++.+..++.+.++.++..++.+|.+++
6029 T Consensus 196 ~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~ 270 (521)
6030 T 5TBK_D 196 ISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDP-----PPPMETIQEILPALCVLIHHTDVNILVDTVWALSYLT 270 (521)
6031 T ss_dssp HHTCCHHHHHTTCCTTSCHHHHHHHHHHHHHHHCCCSS-----CCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHH
6032 T ss_pred HHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCC-----CCCHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHh
6033 Confidence 45567788888886323446778899999998865321 1112223567888888888888889999999999998
6034
6035
6036 Q NP_000290.2 624 RH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
6037 Q Consensus 624 ~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
6038 .. ... ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.+..++.+. ++.++
6039 T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~ 343 (521)
6040 T 5TBK_D 271 DAGNEQIQMVIDSGIVPHLVPLLSH------QEVKVQTAALRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHP-KEKIN 343 (521)
6041 T ss_dssp HHCHHHHHHHHHTTCHHHHGGGGGC------SSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCGGGHHHHHHCS-CHHHH
6042 T ss_pred ccChHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCHHHhHHHHhhCC-CHHHH
6043 Confidence 76 222 233445677788888765 3677888999999999876444444555557788888888766 78889
6044
6045
6046 Q NP_000290.2 702 EAARLLLSDMWSSK 715 (747)
6047 Q Consensus 702 ~aAL~aLsnL~~~~ 715 (747)
6048 ..++.+|.+++...
6049 T Consensus 344 ~~a~~~l~~l~~~~ 357 (521)
6050 T 5TBK_D 344 KEAVWFLSNITAGN 357 (521)
6051 T ss_dssp HHHHHHHHHHTTSC
6052 T ss_pred HHHHHHHHHHhCCC
6053 Confidence 99999999988653
6054
6055
6056 No 104
6057 >4U2X_F eVP24, KPNA5C; eVP24, importin alpha6, immune antagonist; 3.153A {Zaire ebolavirus}
6058 Probab=97.37 E-value=1.2e-07 Score=83.04 Aligned_cols=116 Identities=17% Similarity=0.149 Sum_probs=79.8 Template_Neff=12.500
6059
6060 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKLE 324 (747)
6061 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~~ 324 (747)
6062 +++.+..++.+.++.++..+++++.++..........+...++++.+..++.+.++.++..++.++..++.. .......
6063 T Consensus 9 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 88 (175)
6064 T 4U2X_F 9 ALPCLLHLLSSPKESIRKEACWTVSNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRY 88 (175)
6065 T ss_dssp CSHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHH
6066 T ss_pred hHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCChHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCHHHHHH
6067 Confidence 445566666666778889999999998865443333444446777888877776778888899999988753 2222233
6068
6069
6070 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
6071 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
6072 +...+.++.+...+. ..++.++..++.++.+++....
6073 T Consensus 89 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~ 125 (175)
6074 T 4U2X_F 89 LVALGCIKPLCDLLT-VMDSKIVQVALNGLENILRLGE 125 (175)
6075 T ss_dssp HHHHTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHHHHH
6076 T ss_pred HHHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcch
6077 Confidence 333456777777776 5566788888888888877543
6078
6079
6080 No 105
6081 >4V3Q_A YIII_M4_AII; DE NOVO PROTEIN, PROTEIN ENGINEERING; HET: GOL, CA; 1.8A {SYNTHETIC CONSTRUCT}
6082 Probab=97.37 E-value=1.2e-07 Score=87.00 Aligned_cols=113 Identities=25% Similarity=0.271 Sum_probs=78.0 Template_Neff=12.900
6083
6084 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
6085 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
6086 ++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+.
6087 T Consensus 10 ~~~~~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~ 89 (247)
6088 T 4V3Q_A 10 LPQMVQQLNSPDQQELQSALRKLSQIASGGDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVI 89 (247)
6089 T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
6090 T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHcCChhhhhhhhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHH
6091 Confidence 34455566677788888899999888765444444444556778888888777778888999999988765443333333
6092
6093
6094 Q NP_000290.2 327 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
6095 Q Consensus 327 ~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
6096 ..++++.+...+. +.++.++..++.++..++..
6097 T Consensus 90 ~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 122 (247)
6098 T 4V3Q_A 90 DAGALPALVQLLS-SPNEQILQEALWTLGNIASG 122 (247)
6099 T ss_dssp HTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTS
6100 T ss_pred HCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHcC
6101 Confidence 4456777777776 45667777788888777753
6102
6103
6104 No 106
6105 >3NMZ_A APC variant protein, Rho guanine; protein-protein complex, armadillo repeats, CELL; 3.01A {Homo sapiens}
6106 Probab=97.34 E-value=1.5e-07 Score=97.01 Aligned_cols=136 Identities=21% Similarity=0.259 Sum_probs=84.7 Template_Neff=12.000
6107
6108 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDE-SAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNK 322 (747)
6109 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~-~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
6110 .+++.+..++...++.++..++.+|.+++.... .....+...++++.+..++. ..+..++..++.++.+++.......
6111 T Consensus 243 ~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~ 322 (458)
6112 T 3NMZ_A 243 GCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 322 (458)
6113 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHHCCCChhHHHHHHHCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCchhH
6114 Confidence 456667777777777888999999999887543 22334444567777888777 5567788889999999886433333
6115
6116
6117 Q NP_000290.2 323 LETRR-QNGIREAVSLLRR---TGNAEIQKQLTGLLWNLSS----TDELKEELIA-DALPVLADRVI 380 (747)
6118 Q Consensus 323 ~~ll~-~~IL~~Ll~lL~s---s~d~eVr~~AL~aLsnLas----~~~~~~~Lve-giLe~Lv~LL~ 380 (747)
6119 ..+.. .+.++.+..++.. ..+..++..++.++.+++. .......+.+ ++++.|+.++.
6120 T Consensus 323 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~l~~~~~~~~l~~~l~ 389 (458)
6121 T 3NMZ_A 323 ADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLK 389 (458)
6122 T ss_pred HHHHHhcChHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhC
6123 Confidence 33333 4566666666641 1234566677777766652 2222222333 56666666654
6124
6125
6126 No 107
6127 >3L6X_A Catenin delta-1, E-cadherin; p120, catenin, cadherin, E-cadherin, armadillo; HET: SO4; 2.4A {Homo sapiens}
6128 Probab=97.34 E-value=1.6e-07 Score=102.08 Aligned_cols=377 Identities=16% Similarity=0.154 Sum_probs=185.5 Template_Neff=11.000
6129
6130 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
6131 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
6132 +++.|+.++.+.+..++..++.+|.+++.. .......+...+.++.++.++.. .+..++..++.+|.+++.... ...
6133 T Consensus 91 ~i~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~~v~~~a~~~L~~L~~~~~-~~~ 169 (584)
6134 T 3L6X_A 91 GIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSHDS-IKM 169 (584)
6135 T ss_dssp HHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTSGG-GHH
6136 T ss_pred cHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHcCChHHHHHHHHHHcCCHHHHHHHHHHHHHHhcCHH-HHH
6137 Confidence 466677777777788999999999999874 34444445556778888888875 366788888999988875432 222
6138
6139
6140 Q NP_000290.2 324 ETRRQNGIREAVSLLR-----------------RTGNAEIQKQLTGLLWNLSSTDE-LKEELIA--DALPVLADRVIIPF 383 (747)
6141 Q Consensus 324 ~ll~~~IL~~Ll~lL~-----------------ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve--giLe~Lv~LL~~~~ 383 (747)
6142 .+... .+..+...+. ...+..++..++.+|.+++.... ....+.. ++++.|+.+|....
6143 T Consensus 170 ~l~~~-~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~g~v~~L~~~l~~~~ 248 (584)
6144 T 3L6X_A 170 EIVDH-ALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEI 248 (584)
6145 T ss_dssp HHHHH-THHHCCCCCCHHHHCCC----------CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHH
6146 T ss_pred HHHHH-HHHHHHHhccccCCCCCCCCCcCCCCcccChHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHHHHHh
6147 Confidence 22222 4444444431 12235677888899998887542 3333333 67788888876432
6148
6149
6150 Q NP_000290.2 384 SGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMR--E------LLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLM 455 (747)
6151 Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (747)
6152 .. ...++++.-++..+|+.-..-. + .....+.-....+ .....++..+. -.+.++.|.
6153 T Consensus 249 ~~----------~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~-~~~~~~~l~ 314 (584)
6154 T 3L6X_A 249 GQ----------KDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTG---TSPARGYELLF-QPEVVRIYI 314 (584)
6155 T ss_dssp HT----------TCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC-----------------CCCCGGGGGG-SHHHHHHHH
6156 T ss_pred cC----------CCCChHHHHHHHHHHHHHHhhhhccChhHHHHHHhcCcCCCCCC---CCChhhhhHhh-ChhHHHHHH
6157 Confidence 10 0123334444444443211100 0 0000000000000 00111122221 134555555
6158
6159
6160 Q NP_000290.2 456 AYVQNCVAASRCDDKSVENCMCVLHNLSYRLD---AEVPTRYRQLEYNAR----------NAYTEKSSTGCFSNKSDKMM 522 (747)
6161 Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 522 (747)
6162 ..+... -+..-.+.+..+|.||+..-. .++....+ +...- +.........+..|-+.
6163 T Consensus 315 ~ll~~~-----~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~--~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~--- 384 (584)
6164 T 3L6X_A 315 SLLKES-----KTPAILEASAGAIQNLCAGRWTYGRYIRSALR--QEKALSAIADLLTNEHERVVKAASGALRNLAV--- 384 (584)
6165 T ss_dssp HHHHHC-----CCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHT--SHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHT---
6166 T ss_pred HHHHcC-----CCHHHHHHHHHHHHHHhCCCccCCHHHHHHHH--HcChHHHHHHHhcCCCHHHHHHHHHHHHHHhc---
6167 Confidence 554431 144556777888888876321 11111000 00000 00001111111111100
6168
6169
6170 Q NP_000290.2 523 NNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK--------KDATLEACAGALQNLTASKGLMSSGMSQLIGLKE 594 (747)
6171 Q Consensus 523 ~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~--------d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~ 594 (747)
6172 +...... +..++++.|+.+|.. . +..++..++.+|.+++..... ....+.+.
6173 T Consensus 385 -------------~~~~~~~-l~~~~l~~L~~~L~~-~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~-----~~~~l~~~ 444 (584)
6174 T 3L6X_A 385 -------------DARNKEL-IGKHAIPNLVKNLPG-GQQNSSWNFSEDTVISILNTINEVIAENLE-----AAKKLRET 444 (584)
6175 T ss_dssp -------------TCSCHHH-HHHHHHHHHHHTSSS-SSCSGGGTCCHHHHHHHHHHHHHHHTTCHH-----HHHHHHHT
6176 T ss_pred -------------ChHHHHH-HHcchHHHHHHcCCC-CCCCCCcCCCHHHHHHHHHHHHHHHhcCHH-----HHHHHHHC
6177 Confidence 0011111 224788888888863 3 334467888888888764332 23444577
6178
6179
6180 Q NP_000290.2 595 KGLPQIARLLQSG--NSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPE-VTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
6181 Q Consensus 595 giI~~Ll~LL~s~--d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~-Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
6182 ++++.|+.++... +..++..|+.+|.+++..... ..+...++++. +..++... ..++.++..++.+|.++..
6183 T Consensus 445 ~~l~~L~~ll~~~~~~~~v~~~a~~~L~~l~~~~~~~~~l~~~g~~~~~l~~~~~~~----~~~~~~~~~a~~~L~~l~~ 520 (584)
6184 T 3L6X_A 445 QGIEKLVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDFQVNLNNA----SRSQSSHSYDDSTLPLIDR 520 (584)
6185 T ss_dssp THHHHHHHHHTCSSSCHHHHHHHHHHHHHHHTSHHHHHHHHTTTCCGGGGCCC---------------------------
6186 T ss_pred CHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHcCCchhhceeccccc----ccCCCCCCcccccccccCC
6187 Confidence 8999999998753 477899999999999876444 33445566676 55553211 0357788889999999987
6188
6189
6190 Q NP_000290.2 671 SQ 672 (747)
6191 Q Consensus 671 ~s 672 (747)
6192 ..
6193 T Consensus 521 ~~ 522 (584)
6194 T 3L6X_A 521 NQ 522 (584)
6195 T ss_dssp --
6196 T ss_pred CC
6197 Confidence 53
6198
6199
6200 No 108
6201 >5MFI_B YIII(Dq.V2)4CqI, (KR)4; Designed armadillo repeat protein, peptide; 1.45A {synthetic construct}
6202 Probab=97.33 E-value=1.5e-07 Score=85.77 Aligned_cols=113 Identities=20% Similarity=0.252 Sum_probs=78.4 Template_Neff=13.000
6203
6204 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
6205 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
6206 +++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++.+++.........+
6207 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 84 (243)
6208 T 5MFI_B 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 84 (243)
6209 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHTTTSSCHHHHHHHHHHHHHHTTSCHHHHHHH
6210 T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
6211 Confidence 45556666666777888899999998876544443444445677888888877778888899999998886444333333
6212
6213
6214 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
6215 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
6216 ...++++.+...+. ..++.++..++.++..++.
6217 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~ 117 (243)
6218 T 5MFI_B 85 IEAGALSPLVKLLD-DASEEVIQEAVWAIANIAS 117 (243)
6219 T ss_dssp HHTTCHHHHHHHTS-SSCHHHHHHHHHHHHHHTT
6220 T ss_pred HHcCcHHHHHHHHh-cCCHHHHHHHHHHHHHHHc
6221 Confidence 33456777777775 4566677777888877775
6222
6223
6224 No 109
6225 >5MFJ_B YIII(Dq.V2)4CqI, (KR)5; Designed armadillo repeat protein, peptide; 1.53A {synthetic construct}
6226 Probab=97.33 E-value=1.5e-07 Score=85.77 Aligned_cols=113 Identities=20% Similarity=0.252 Sum_probs=77.5 Template_Neff=13.000
6227
6228 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
6229 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
6230 +++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++.+++.........+
6231 T Consensus 5 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 84 (243)
6232 T 5MFJ_B 5 ELPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 84 (243)
6233 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHGGGCSCTTTC-CHHHHHHHHTTSCHHHHHHH
6234 T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
6235 Confidence 45556666666777888899999998876544443444445677888888877778888899999998886444333333
6236
6237
6238 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
6239 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
6240 ...++++.+...+. ..++.++..++.++..++.
6241 T Consensus 85 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~ 117 (243)
6242 T 5MFJ_B 85 IEAGALSPLVKLLD-DASEEVIQEAVWAIANIAS 117 (243)
6243 T ss_dssp HHTTCHHHHHHHHH-HSCHHHHHHHHHHHHHHHT
6244 T ss_pred HHcCcHHHHHHHHh-cCCHHHHHHHHHHHHHHHc
6245 Confidence 33456777777775 4566677777888877775
6246
6247
6248 No 110
6249 >5VOZ_P V-type proton ATPase catalytic subunit; V-ATPase, SidK, rotational state 3;{Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
6250 Probab=97.30 E-value=2.1e-07 Score=101.03 Aligned_cols=134 Identities=14% Similarity=0.103 Sum_probs=89.5 Template_Neff=8.900
6251
6252 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICK--LVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
6253 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~--Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
6254 .++.++.++.+ +..++..++.+|..++... .........+.++. ++.++.. .+..++..++.+|..++... ...
6255 T Consensus 124 ~~~~li~lL~~-d~~i~~~a~~~L~~L~~~~-~~~~~~~~~~~l~~~~li~~L~~~~~~~~~~~a~~~L~~L~~~~-~~r 200 (478)
6256 T 5VOZ_P 124 LEQLFDVSLKG-DFQTVLISGFNVVSLLVQN-GLHNVKLVEKLLKNNNLINILQNIEQMDTCYVCIRLLQELAVIP-EYR 200 (478)
6257 T ss_dssp HHHHTTSTTSS-CHHHHHHHHHHHHHHHTSS-SCCCHHHHHHHHSSHHHHHHHHCSSCHHHHHHHHHHHHHHTTSH-HHH
6258 T ss_pred HHHHHHHHcCC-CHHHHHHHHHHHHHHHHhc-cccCcccchhhcccchHHHHHhccCCccHHHHHHHHHHHHcCCh-HHH
6259 Confidence 45666667766 6677888888888887643 22112223456666 7777753 35667888899999888643 333
6260
6261
6262 Q NP_000290.2 323 LETRR--QNGIREAVSLLRRT----------------GNAEIQKQLTGLLWNLSSTDELKEELIA---DALPVLADRVII 381 (747)
6263 Q Consensus 323 ~~ll~--~~IL~~Ll~lL~ss----------------~d~eVr~~AL~aLsnLas~~~~~~~Lve---giLe~Lv~LL~~ 381 (747)
6264 ..+.. .+.++.|+.++... .++.++..++.++..|+........+.. ++++.|+++++.
6265 T Consensus 201 ~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~~~~~~~~~~~~ql~~~a~~~L~~Ls~~~~~~~~l~~~~~~~i~~Lv~ll~~ 280 (478)
6266 T 5VOZ_P 201 DVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKI 280 (478)
6267 T ss_dssp HHHHHSTTSSHHHHHHHHHHHHHSCSSCCCTTTSSSHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHSHHHHGGGHHHHHH
6268 T ss_pred HHHHHccccchHHHHHHHHhccccccccccccccCcCcCHHHHHHHHHHHHHHhcCHHHHHHHHHHhHHHHHHHHHHHhc
6269 Confidence 33444 35777888877621 2567888899999999876555555543 688889998886
6270
6271
6272 Q NP_000290.2 382 P 382 (747)
6273 Q Consensus 382 ~ 382 (747)
6274 .
6275 T Consensus 281 ~ 281 (478)
6276 T 5VOZ_P 281 T 281 (478)
6277 T ss_dssp C
6278 T ss_pred c
6279 Confidence 4
6280
6281
6282 No 111
6283 >5D80_H V-type proton ATPase catalytic subunit; Hydrolase, Autoinhibition; 6.202A {Saccharomyces cerevisiae}
6284 Probab=97.30 E-value=2.1e-07 Score=101.03 Aligned_cols=134 Identities=14% Similarity=0.103 Sum_probs=89.5 Template_Neff=8.900
6285
6286 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICK--LVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
6287 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~--Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
6288 .++.++.++.+ +..++..++.+|..++... .........+.++. ++.++.. .+..++..++.+|..++... ...
6289 T Consensus 124 ~~~~li~lL~~-d~~i~~~a~~~L~~L~~~~-~~~~~~~~~~~l~~~~li~~L~~~~~~~~~~~a~~~L~~L~~~~-~~r 200 (478)
6290 T 5D80_H 124 LEQLFDVSLKG-DFQTVLISGFNVVSLLVQN-GLHNVKLVEKLLKNNNLINILQNIEQMDTCYVCIRLLQELAVIP-EYR 200 (478)
6291 T ss_pred HHHHHHHHcCC-CHHHHHHHHHHHHHHHHhc-cccCcccchhhcccchHHHHHhccCCccHHHHHHHHHHHHcCCh-HHH
6292 Confidence 45666667766 6677888888888887643 22112223456666 7777753 35667888899999888643 333
6293
6294
6295 Q NP_000290.2 323 LETRR--QNGIREAVSLLRRT----------------GNAEIQKQLTGLLWNLSSTDELKEELIA---DALPVLADRVII 381 (747)
6296 Q Consensus 323 ~~ll~--~~IL~~Ll~lL~ss----------------~d~eVr~~AL~aLsnLas~~~~~~~Lve---giLe~Lv~LL~~ 381 (747)
6297 ..+.. .+.++.|+.++... .++.++..++.++..|+........+.. ++++.|+++++.
6298 T Consensus 201 ~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~~~~~~~~~~~~ql~~~a~~~L~~Ls~~~~~~~~l~~~~~~~i~~Lv~ll~~ 280 (478)
6299 T 5D80_H 201 DVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKI 280 (478)
6300 T ss_pred HHHHHccccchHHHHHHHHhccccccccccccccCcCcCHHHHHHHHHHHHHHhcCHHHHHHHHHHhHHHHHHHHHHHhc
6301 Confidence 33444 35777888877621 2567888899999999876555555543 688889998886
6302
6303
6304 Q NP_000290.2 382 P 382 (747)
6305 Q Consensus 382 ~ 382 (747)
6306 .
6307 T Consensus 281 ~ 281 (478)
6308 T 5D80_H 281 T 281 (478)
6309 T ss_pred c
6310 Confidence 4
6311
6312
6313 No 112
6314 >1JDH_A BETA-CATENIN, hTcf-4; BETA-CATENIN, TCF4, PROTEIN-PROTEIN COMPLEX, TRANSCRIPTION; 1.9A {Homo sapiens} SCOP: a.118.1.1
6315 Probab=97.29 E-value=1.9e-07 Score=95.60 Aligned_cols=138 Identities=25% Similarity=0.275 Sum_probs=87.6 Template_Neff=13.100
6316
6317 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR--SPNQNVQQAAAGALRNLVFRSTTN- 321 (747)
6318 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~--s~d~eVr~~AL~aLs~La~~~~~~- 321 (747)
6319 .+++.+...+.+.+..++..++.++..++.........+...+.++.+...+. ..++.++..++.++..++......
6320 T Consensus 266 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~ 345 (529)
6321 T 1JDH_A 266 GLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAE 345 (529)
6322 T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHH
6323 T ss_pred hHHHHHHHHhCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCHHHHHHHHHHhcCCChHhHHHHHHHHHHHhcCcccHH
6324 Confidence 44555666666667778888888888887654433333344556666766554 345677888888888887654321
6325
6326
6327 Q NP_000290.2 322 --KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIP 382 (747)
6328 Q Consensus 322 --~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~~ 382 (747)
6329 .......+.++.+...+....++.++..++.++.+++........+.. ++++.|..++...
6330 T Consensus 346 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~l~~~l~~~ 409 (529)
6331 T 1JDH_A 346 MAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRA 409 (529)
6332 T ss_dssp HHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHH
6333 T ss_pred HHHHHHHhcccHHHHHHHHCCCCCHHHHHHHHHHHHHHhcChhhhHHHHhcCHHHHHHHHHHhc
6334 Confidence 112222356667777775223567888899999988876444444444 6777777777643
6335
6336
6337 No 113
6338 >2Z6G_A B-catenin; Full-Length, Beta-Catenin, CELL ADHESION; 3.4A {Danio rerio}
6339 Probab=97.28 E-value=2.2e-07 Score=105.08 Aligned_cols=353 Identities=20% Similarity=0.229 Sum_probs=182.2 Template_Neff=10.700
6340
6341 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
6342 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
6343 .+++.+..++.+.+..++..++.+|..++.........+...+++..++.++... +..++..++.+|..+..... ...
6344 T Consensus 276 ~~~~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~v~~~a~~~L~~l~~~~~-~~~ 354 (780)
6345 T 2Z6G_A 276 GGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS-NKP 354 (780)
6346 T ss_pred CHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCHH-HHH
6347 Confidence 3455566666666778888888888888764443333333445677777777654 56777888888888775432 222
6348
6349
6350 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
6351 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
6352 .+...++++.+...+. ..+..++..++.+|..++...... ....++++.|+.++... ++++.
6353 T Consensus 355 ~~~~~~~l~~L~~~l~-~~~~~v~~~al~~L~~l~~~~~~~-~~~~~~l~~L~~~l~~~----------------~~~v~ 416 (780)
6354 T 2Z6G_A 355 AIVEAGGMQALGLHLT-DPSQRLVQNCLWTLRNLSDAATKQ-EGMEGLLGTLVQLLGSD----------------DINVV 416 (780)
6355 T ss_pred HHHHCCHHHHHHHHcc-CCCHHHHHHHHHHHHHHhcCCCCH-HHHcChHHHHHHHhcCC----------------CHHHH
6356 Confidence 2333456777777776 556778888999998887643321 11125566666666421 23344
6357
6358
6359 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
6360 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
6361 ..+..+|..-..- .+. .+. .-.-.+.++.|...+.. ..-+..-.+.+.+.|.++.
6362 T Consensus 417 ~~a~~~L~~l~~~------~~~--------------~~~-~~~~~~~l~~L~~~l~~----~~~~~~v~~~a~~~L~~l~ 471 (780)
6363 T 2Z6G_A 417 TCAAGILSNLTCN------NYK--------------NKM-MVCQVGGIEALVRTVLR----AGDREDITEPAICALRHLT 471 (780)
6364 T ss_pred HHHHHHHHHHHcC------CHH--------------HHH-HHHHCChHHHHHHHHhc----CCCCHHHHHHHHHHHHHHH
6365 Confidence 4444443221100 000 000 00012233333322211 0112233456666666666
6366
6367
6368 Q NP_000290.2 484 YRLDAEV------------PTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRT 551 (747)
6369 Q Consensus 484 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~ 551 (747)
6370 .+..... +.-.+-+.. ..+....+....++.+-.. .......+.+.++++.
6371 T Consensus 472 ~~~~~~~~~~~~~~~~~~i~~L~~ll~~-~~~~~v~~~a~~~L~~l~~----------------~~~~~~~~~~~~~l~~ 534 (780)
6372 T 2Z6G_A 472 SRHQDAEMAQNAVRLHYGLPVVVKLLHP-PSHWPLIKATVGLIRNLAL----------------CPANHAPLREQGAIPR 534 (780)
6373 T ss_pred cCCccHHHHHHHHHHCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHhc----------------CHHHHHHHHhCChHHH
6374 Confidence 5442110 000000000 0000000011111111100 0011112345566666
6375
6376
6377 Q NP_000290.2 552 YLNLMGKSKK----------------------DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS 609 (747)
6378 Q Consensus 552 LL~LL~ss~d----------------------~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~ 609 (747)
6379 |+.++.. .. ..++..++.+|.+++.... ....+...++++.|+.++.+.++
6380 T Consensus 535 L~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~aL~~L~~~~~------~~~~~~~~~~l~~L~~~l~~~~~ 607 (780)
6381 T 2Z6G_A 535 LVQLLVR-AHQDTQRRTSMGGTQQQFVEGVRMEEIVEACTGALHILARDIH------NRIVIRGLNTIPLFVQLLYSPIE 607 (780)
6382 T ss_pred HHHHhcC-CCHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHHHhCChh------HHHHHHhCCcHHHHHHHhcCCCH
6383 Confidence 7666652 22 2366777777777775422 12222345667777777777677
6384
6385
6386 Q NP_000290.2 610 DVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
6387 Q Consensus 610 eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
6388 .++..++.+|.+++..... ..+...++++.|..++.+ .++.++..++.+|.+|+..
6389 T Consensus 608 ~v~~~a~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~------~~~~v~~~a~~~L~~L~~~ 664 (780)
6390 T 2Z6G_A 608 NIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHS------RNEGVATYAAAVLFRMSED 664 (780)
6391 T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHCCcHHHHHHHhcC------CCHHHHHHHHHHHHHHHCC
6392 Confidence 7788888888888755332 233345566777777665 3567777788888887764
6393
6394
6395 No 114
6396 >1HO8_A VACUOLAR ATP SYNTHASE SUBUNIT H; HEAT repeat, HYDROLASE; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
6397 Probab=97.27 E-value=2.5e-07 Score=100.53 Aligned_cols=135 Identities=14% Similarity=0.099 Sum_probs=89.8 Template_Neff=8.900
6398
6399 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICK--LVDLLRS-PNQNVQQAAAGALRNLVFRSTTN 321 (747)
6400 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~--Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~ 321 (747)
6401 ..++.++.++.+ +..++..++.+|..++... .........+.++. ++.++.. .+..++..++.+|..++... ..
6402 T Consensus 125 ~~~~~li~lL~~-d~~i~~~a~~~L~~L~~~~-~~~~~~~~~~~l~~~~lv~~L~~~~~~~~~~~a~~~L~~L~~~~-~~ 201 (480)
6403 T 1HO8_A 125 QLEQLFDVSLKG-DFQTVLISGFNVVSLLVQN-GLHNVKLVEKLLKNNNLINILQNIEQMDTCYVCIRLLQELAVIP-EY 201 (480)
6404 T ss_dssp HHHHHHHHCSCS-SHHHHHHHHHHHHHHHTST-TTCCHHHHHHHHHCHHHHHHHHCTTCHHHHHHHHHHHHHHHTSH-HH
6405 T ss_pred hHHHHHHHHcCC-CHHHHHHHHHHHHHHHHhc-cccCcccchhhcccchHHHHHhcccCccHHHHHHHHHHHHcCCh-HH
6406 Confidence 345666777766 6677888888888887643 22112223456776 7777753 35667888899998888643 33
6407
6408
6409 Q NP_000290.2 322 KLETRR--QNGIREAVSLLRRT----------------GNAEIQKQLTGLLWNLSSTDELKEELIA---DALPVLADRVI 380 (747)
6410 Q Consensus 322 ~~~ll~--~~IL~~Ll~lL~ss----------------~d~eVr~~AL~aLsnLas~~~~~~~Lve---giLe~Lv~LL~ 380 (747)
6411 ...+.. .+.++.|+.++... .++.++..++.++..|.........+.. ++++.|+++++
6412 T Consensus 202 r~~~~~~~~~~i~~Lv~lL~~~~~~~~~~~~~~~~~~~~~~ql~~~a~~~L~~Ls~~~~~~~~i~~~~~~~i~~Lv~ll~ 281 (480)
6413 T 1HO8_A 202 RDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVK 281 (480)
6414 T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHTTSHHHHHHHHTTSHHHHHHHHHHHH
6415 T ss_pred HHHHHHccccchHHHHHHHHhccccchhcchhhccCcCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhHHHHHHHHHHHh
6416 Confidence 333444 35677787777621 2567888899999998876555555543 68888999888
6417
6418
6419 Q NP_000290.2 381 IP 382 (747)
6420 Q Consensus 381 ~~ 382 (747)
6421 ..
6422 T Consensus 282 ~~ 283 (480)
6423 T 1HO8_A 282 IT 283 (480)
6424 T ss_dssp HC
6425 T ss_pred hc
6426 Confidence 64
6427
6428
6429 No 115
6430 >6S9O_F designed Armadillo repeat protein with; peptide binder, repeat protein, designed; HET: CA, EDO; 3.17A {synthetic construct}
6431 Probab=97.21 E-value=2.9e-07 Score=88.31 Aligned_cols=135 Identities=25% Similarity=0.275 Sum_probs=88.9 Template_Neff=13.100
6432
6433 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
6434 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
6435 +++.+...+.+.+..++..++.++..+..........+...++++.+...+...++.++..++.++..++..........
6436 T Consensus 173 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 252 (344)
6437 T 6S9O_F 173 ALPALVQLLSSPNEQILQLALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 252 (344)
6438 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
6439 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHHcCChHHHHHHHhcChHHHHHHHccCCCHHHHHHHHHHHHHHHcCcHHHHHHH
6440 Confidence 45556666666677888889999988876543333333334567777777777777888889999988875544333333
6441
6442
6443 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVII 381 (747)
6444 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~~ 381 (747)
6445 ...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.|..++..
6446 T Consensus 253 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 309 (344)
6447 T 6S9O_F 253 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSH 309 (344)
6448 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGC
6449 T ss_pred HHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHhhC
6450 Confidence 34456777777776 55677888899999988865322 222222 566666666643
6451
6452
6453 No 116
6454 >1XM9_A plakophilin 1 Plakophilin-1; armadillo repeat, CELL ADHESION; 2.8A {Homo sapiens} SCOP: a.118.1.24
6455 Probab=97.20 E-value=3.2e-07 Score=93.10 Aligned_cols=114 Identities=15% Similarity=0.165 Sum_probs=77.3 Template_Neff=12.600
6456
6457 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP------NQNVQQAAAGALRNLVFRST 319 (747)
6458 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~------d~eVr~~AL~aLs~La~~~~ 319 (747)
6459 +++.+..++.+.++.++..++.+|.+++... .....+ ...+++.+..++... +..++..++.++.+++...+
6460 T Consensus 332 ~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~-~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~L~~l~~~~~ 409 (457)
6461 T 1XM9_A 332 GLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LLHRVM-GNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP 409 (457)
6462 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSG-GGHHHH-HHHTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCT
6463 T ss_pred hHHHHHHHHhcCCHHHHHHHHHHHHHHhcCH-HHHHHH-HcccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHhcCH
6464 Confidence 4556666676677788889999999988542 222222 234667777777655 57788888999988875444
6465
6466
6467 Q NP_000290.2 320 TNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD 361 (747)
6468 Q Consensus 320 ~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~ 361 (747)
6469 .....+...+.++.+..++....++.++..++.++..++...
6470 T Consensus 410 ~~~~~~~~~~~~~~l~~ll~~~~~~~v~~~a~~~L~~l~~~~ 451 (457)
6471 T 1XM9_A 410 QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 451 (457)
6472 T ss_dssp HHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSSST
6473 T ss_pred HHHHHHHhccHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhcH
6474 Confidence 444444455677778887762256778888888888887644
6475
6476
6477 No 117
6478 >1XQS_B HSPBP1 protein, Heat shock 70; armadillo repeat, superhelical twist, CHAPERONE; HET: AMP; 2.9A {Homo sapiens} SCOP: a.118.1.21
6479 Probab=97.20 E-value=3.3e-07 Score=87.92 Aligned_cols=134 Identities=22% Similarity=0.180 Sum_probs=90.6 Template_Neff=11.900
6480
6481 Q NP_000290.2 246 TIPKAVQ-YLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
6482 Q Consensus 246 iL~~Ll~-lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
6483 +++.++. ++.+.+..++..++.++.+++.........+...++++.+..++... +..++..++.++.+++........
6484 T Consensus 66 ~i~~l~~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~ 145 (280)
6485 T 1XQS_B 66 GMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLL 145 (280)
6486 T ss_dssp HHHHCCCCCTSCSCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHHSCSCHHHHHHHHHHHHHTTSSCHHHHH
6487 T ss_pred cHHHHHHHHhhcCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHhcCHHHHH
6488 Confidence 3455555 66666677888899999998865444344444456777788877765 677888899999998865443333
6489
6490
6491 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
6492 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
6493 .+...+.++.+..++. ..+..++..++.++.+++.... ....+.. ++++.|+.++.
6494 T Consensus 146 ~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 203 (280)
6495 T 1XQS_B 146 QFLRLDGFSVLMRAMQ-QQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVR 203 (280)
6496 T ss_dssp HHHTTTHHHHHHHHHT-SSCHHHHHHHHHHHHHHHHHCGGGHHHHHTTTHHHHHHHHHT
6497 T ss_pred HHHHCCHHHHHHHHhh-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCHHHHHHHHHc
6498 Confidence 3444466777777776 4566788889999998887543 3333333 67777777764
6499
6500
6501 No 118
6502 >5MFI_B YIII(Dq.V2)4CqI, (KR)4; Designed armadillo repeat protein, peptide; 1.45A {synthetic construct}
6503 Probab=97.18 E-value=3.4e-07 Score=83.37 Aligned_cols=134 Identities=19% Similarity=0.243 Sum_probs=88.0 Template_Neff=13.000
6504
6505 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
6506 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
6507 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
6508 T Consensus 47 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 126 (243)
6509 T 5MFI_B 47 ALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 126 (243)
6510 T ss_dssp CHHHHHHTTTSSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTSSSCHHHHHHHHHHHHHHTTSCHHHHHHH
6511 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHH
6512 Confidence 45566666766777888889999998886544433334445677778888877777888889999998876444333333
6513
6514
6515 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
6516 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
6517 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
6518 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 182 (243)
6519 T 5MFI_B 127 IEAGALSPLVKLLD-DASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLD 182 (243)
6520 T ss_dssp HHTTCHHHHHHTTT-SSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHGGG
6521 T ss_pred HHCCcHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHcc
6522 Confidence 44456777777776 5566778888888888876322 2222222 45666665554
6523
6524
6525 No 119
6526 >5MFJ_B YIII(Dq.V2)4CqI, (KR)5; Designed armadillo repeat protein, peptide; 1.53A {synthetic construct}
6527 Probab=97.18 E-value=3.4e-07 Score=83.37 Aligned_cols=134 Identities=19% Similarity=0.243 Sum_probs=87.2 Template_Neff=13.000
6528
6529 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
6530 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
6531 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
6532 T Consensus 47 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 126 (243)
6533 T 5MFJ_B 47 ALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 126 (243)
6534 T ss_dssp CHHHHHHGGGCSCTTTC-CHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHTSCHHHHHHH
6535 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHH
6536 Confidence 45566666766777888889999998886544433334445677778888877777888889999998876444333333
6537
6538
6539 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
6540 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
6541 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
6542 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 182 (243)
6543 T 5MFJ_B 127 IEAGALSPLVKLLD-DASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLD 182 (243)
6544 T ss_dssp HHTTCHHHHHHTTT-SSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHGGG
6545 T ss_pred HHCCcHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHcc
6546 Confidence 44456777777776 5566778888888888876322 2222222 45666665554
6547
6548
6549 No 120
6550 >6SA6_A DARPin-Armadillo fusion A5; protein fusion, DARPin, Armadillo, shared; HET: EDO; 1.6A {synthetic construct}
6551 Probab=97.16 E-value=3.9e-07 Score=91.03 Aligned_cols=134 Identities=25% Similarity=0.292 Sum_probs=90.1 Template_Neff=12.400
6552
6553 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
6554 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
6555 +++.+...+.+.++.++..++.++.+++.........+...++++.+..++...++.++..++.++.+++.........+
6556 T Consensus 200 ~i~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 279 (397)
6557 T 6SA6_A 200 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 279 (397)
6558 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
6559 T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCcHHHHHHH
6560 Confidence 45566667776777888899999999887544444444455678888888887788889999999999876443333333
6561
6562
6563 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
6564 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
6565 ...++++.+...+. ..++.++..++.++.+++..... ...+.. ++++.|+.++.
6566 T Consensus 280 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 335 (397)
6567 T 6SA6_A 280 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLS 335 (397)
6568 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
6569 T ss_pred HhCChHHHHHHHhc-CCcHHHHHHHHHHHHHHhcCcHHHHHHHHhcChHHHHHHHhc
6570 Confidence 34456777777776 45667778888888888654322 222222 56666666654
6571
6572
6573 No 121
6574 >6SA8_A ring-like DARPin-Armadillo fusion H83_D01, LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG; protein fusion, DARPin, Armadillo, shared; 2.4A {synthetic construct}
6575 Probab=97.16 E-value=4e-07 Score=98.84 Aligned_cols=135 Identities=26% Similarity=0.299 Sum_probs=93.7 Template_Neff=11.900
6576
6577 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
6578 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
6579 .+++.+...+.+.++.++..++.++.+++...+.....+...+.++.+...+.+.+..++..++.++..++.........
6580 T Consensus 220 ~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 299 (671)
6581 T 6SA8_A 220 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 299 (671)
6582 T ss_dssp THHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
6583 T ss_pred ChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCcHHHHH
6584 Confidence 34566667777777888999999999987654443334444567788888887777888899999999888654333333
6585
6586
6587 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELK-EELIA-DALPVLADRVI 380 (747)
6588 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~-~~Lve-giLe~Lv~LL~ 380 (747)
6589 +...++++.+...+. ..++.++..++.++..++...... ..+.. ++++.|..++.
6590 T Consensus 300 ~~~~~~~~~L~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~l~~~l~ 356 (671)
6591 T 6SA8_A 300 VIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 356 (671)
6592 T ss_dssp HHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
6593 T ss_pred HHHhChHHHHHHHhc-CCcHHHHHHHHHHHHHHhcCCcHHHHHHHhcChHHHHHHHhc
6594 Confidence 444567778888886 556788889999999987643322 22333 66777777775
6595
6596
6597 No 122
6598 >1XQR_A HspBP1 protein; armadillo repeat, superhelical twist, CHAPERONE; HET: MSE; 2.1A {Homo sapiens} SCOP: a.118.1.21
6599 Probab=97.14 E-value=4.4e-07 Score=88.91 Aligned_cols=134 Identities=22% Similarity=0.180 Sum_probs=91.0 Template_Neff=11.300
6600
6601 Q NP_000290.2 246 TIPKAVQ-YLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
6602 Q Consensus 246 iL~~Ll~-lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
6603 +++.++. ++...++.++..++.+|.+++.........+...++++.+..++... +..++..++.++.+++........
6604 T Consensus 82 ~~~~l~~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~l~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~ 161 (296)
6605 T 1XQR_A 82 GMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLL 161 (296)
6606 T ss_dssp HHHHCCCCCTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHH
6607 T ss_pred cHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHH
6608 Confidence 3455555 66666677888899999998865443334444456777788777765 677888999999999865443333
6609
6610
6611 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
6612 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
6613 .+...+.++.+...+. ..+..++..++.++.+++.... ....+.. ++++.|+.++.
6614 T Consensus 162 ~~~~~~~i~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~ 219 (296)
6615 T 1XQR_A 162 QFLRLDGFSVLMRAMQ-QQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVR 219 (296)
6616 T ss_dssp HHHHTTHHHHHHHHHH-SSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHT
6617 T ss_pred HHHHCCHHHHHHHHhh-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCCHHHHHHHHHc
6618 Confidence 3444456777777776 4567788889999999887543 3333333 67777777764
6619
6620
6621 No 123
6622 >4UAD_A Importin alpha import adaptor, Influenza; importin karyopherin complex NLS, PROTEIN; 2.42A {Homo sapiens}
6623 Probab=97.13 E-value=4.5e-07 Score=91.78 Aligned_cols=368 Identities=15% Similarity=0.162 Sum_probs=225.0 Template_Neff=12.900
6624
6625 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDE--SAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTN 321 (747)
6626 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~--~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~ 321 (747)
6627 .+++.+...+.+.++.++..++.+|..+..... .....+...++++.+...+.. .++.++..++.++..++......
6628 T Consensus 23 ~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~ 102 (479)
6629 T 4UAD_A 23 VITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPRVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQ 102 (479)
6630 T ss_dssp CCCHHHHHHHTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHSTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHTTSCHHH
6631 T ss_pred hhHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCChhHhhcCcchHHHHHHHhhcCCCHHHHHHHHHHHHHHhCCCchH
6632 Confidence 456666777777778889999999988876422 111122223567777777765 66778888999998887654333
6633
6634
6635 Q NP_000290.2 322 KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVD 399 (747)
6636 Q Consensus 322 ~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~ 399 (747)
6637 ...+...++++.+..++. ..++.++..++.++..++.... ....+.. ++++.|+.++... .+
6638 T Consensus 103 ~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------~~ 166 (479)
6639 T 4UAD_A 103 TKIVIEAGAVPIFIELLN-SDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKS---------------TR 166 (479)
6640 T ss_dssp HHHHHHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHC---------------CC
6641 T ss_pred HHHHHHcCHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCChHHHHHHHhCCcHHHHHHHhhcC---------------Cc
6642 Confidence 333333457777788776 5567888899999998887533 2223333 5666666666521 12
6643
6644
6645 Q NP_000290.2 400 PEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVL 479 (747)
6646 Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (747)
6647 +++-..+..+|..-.. ............+.++.|...+.. -+..-...+...|
6648 T Consensus 167 ~~~~~~a~~~l~~l~~---------------------~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l 219 (479)
6649 T 4UAD_A 167 LTMTRNAVWALSNLCR---------------------GKNPPPEFAKVSPCLPVLSRLLFS------SDSDLLADACWAL 219 (479)
6650 T ss_dssp HHHHHHHHHHHHHHHC---------------------CCSSCCCGGGTGGGHHHHHHHTTC------CCHHHHHHHHHHH
6651 T ss_pred hHHHHHHHHHHHHHHc---------------------CCCCCchhhcccchHHHHHHHhcC------CCHHHHHHHHHHH
6652 Confidence 3333333333321110 000011111122334433333321 1111222233333
6653
6654
6655 Q NP_000290.2 480 HNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKS 559 (747)
6656 Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss 559 (747)
6657 .++.... ......+.+.++++.++.++. +
6658 T Consensus 220 ~~l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~ 248 (479)
6659 T 4UAD_A 220 SYLSDGP--------------------------------------------------NEKIQAVIDSGVCRRLVELLM-H 248 (479)
6660 T ss_dssp HHHTSSS--------------------------------------------------HHHHHHHHHTTCHHHHHHGGG-C
6661 T ss_pred HHHhcCc--------------------------------------------------hHHHHHHHhCCHHHHHHHHhc-C
6662 Confidence 3322100 000111234567788888887 4
6663
6664
6665 Q NP_000290.2 560 KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVF 637 (747)
6666 Q Consensus 560 ~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI 637 (747)
6667 .++.++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++... .. ..+...+++
6668 T Consensus 249 ~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~ 323 (479)
6669 T 4UAD_A 249 NDYKVASPALRAVGNIVTGDDI-----QTQVILNCSALPCLLHLLSSPKESIRKEACWTISNITAGNRAQIQAVIDANIF 323 (479)
6670 T ss_dssp SCHHHHHHHHHHHHHHTTSCHH-----HHHHHHTTTCHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCH
6671 T ss_pred CCHHhHHHHHHHHHHHhcCCHH-----HHHHHHhcChHHHHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHH
6672 Confidence 6778888999999998875332 1223334578888999998888889999999999998763 22 233445678
6673
6674
6675 Q NP_000290.2 638 PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
6676 Q Consensus 638 ~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~-s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
6677 +.+..++.+ .++.++..++.+|.+++.. .+.....+.+.++++.+..++.+. ++.++..++.+|.+++...+
6678 T Consensus 324 ~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~~~ 396 (479)
6679 T 4UAD_A 324 PVLIEILQK------AEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVM-DSKIVQVALNGLENILRLGE 396 (479)
6680 T ss_dssp HHHHHHHHH------SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHGGGGCS-CHHHHHHHHHHHHHHHHHHH
6681 T ss_pred HHHHHHHhc------cCHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCcHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHHH
6682 Confidence 888888876 3678899999999999864 233444455556788888888866 78889999999999987654
6683
6684
6685 Q NP_000290.2 717 LQ 718 (747)
6686 Q Consensus 717 ~~ 718 (747)
6687 ..
6688 T Consensus 397 ~~ 398 (479)
6689 T 4UAD_A 397 QE 398 (479)
6690 T ss_dssp HH
6691 T ss_pred Hh
6692 Confidence 43
6693
6694
6695 No 124
6696 >5MFD_C YIIIM''6AII, Capsid decoration protein,pD_(KR)5; Designed armadillo repeat protein, peptide; HET: CA; 2.3A {synthetic construct}
6697 Probab=97.07 E-value=6.1e-07 Score=84.84 Aligned_cols=114 Identities=25% Similarity=0.284 Sum_probs=75.6 Template_Neff=13.300
6698
6699 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
6700 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
6701 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..+...........
6702 T Consensus 89 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 168 (328)
6703 T 5MFD_C 89 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 168 (328)
6704 T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
6705 T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
6706 Confidence 45556666666677788888999988876543333333344567777777777777888889999988875443332333
6707
6708
6709 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
6710 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
6711 ...++++.+...+. ..+..++..++.++..++..
6712 T Consensus 169 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 202 (328)
6713 T 5MFD_C 169 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASG 202 (328)
6714 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHHTS
6715 T ss_pred HHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHcC
6716 Confidence 33456666777775 45566777777777777653
6717
6718
6719 No 125
6720 >6HB3_B Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; 3.0A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
6721 Probab=97.07 E-value=7e-07 Score=92.28 Aligned_cols=121 Identities=9% Similarity=-0.026 Sum_probs=77.4 Template_Neff=10.100
6722
6723 Q NP_000290.2 246 TIPKAVQYLSS---QDEKYQAIGAYYIQHTCFQDESAKQQVY--QLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTT 320 (747)
6724 Q Consensus 246 iL~~Ll~lL~s---sd~eVr~sAL~aLsnLs~~~~~~~~~li--~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~ 320 (747)
6725 .++.|+.++.. .+..++..++.+|.++... ......+. ..+.++.++.++...+..++..++.+|.+++....
6726 T Consensus 52 ~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~-~~~~~~l~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~nl~~~~~- 129 (369)
6727 T 6HB3_B 52 PIKDIIKMIMDPEHGTRVIIQQGVTILVNLSED-KLVRNIILSDDKKFLKFLVWKIVDLTNPNADIMCILLSNLAKDDG- 129 (369)
6728 T ss_pred cHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCC-HHHHHHHHhccCCcHHHHHHHhcCCCHHHHHHHHHHHHHHcCChH-
6729 Confidence 56667777743 3567888899999998754 33344444 56788888888877667788888999988886432
6730
6731
6732 Q NP_000290.2 321 NKLET-------------------------RRQNGIREAVSLLRRTG------NAEIQKQLTGLLWNLSSTDELKEELIA 369 (747)
6733 Q Consensus 321 ~~~~l-------------------------l~~~IL~~Ll~lL~ss~------d~eVr~~AL~aLsnLas~~~~~~~Lve 369 (747)
6734 ....+ ...++++.++.++. .. +..++..++.+|.+++........+.+
6735 T Consensus 130 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~Lv~~l~-~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~l~~ 208 (369)
6736 T 6HB3_B 130 ILAVLNIKRNSSGEEVDDGLKLAALNKEVFKSLRAMDCLMDCFV-KGYDKKLTKYASFNYLAFFFADISRFKLGRMYFIE 208 (369)
6737 T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHCCcHHHHHHHhc-CCCCccCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
6738 Confidence 11212 11345666666665 32 345666777777777765444444444
6739
6740
6741 No 126
6742 >3OPB_A SWI5-dependent HO expression protein 4; HEAT and ARM fold, Myosin; 2.9A {Saccharomyces cerevisiae}
6743 Probab=97.06 E-value=7.2e-07 Score=100.91 Aligned_cols=156 Identities=12% Similarity=0.164 Sum_probs=96.5 Template_Neff=10.500
6744
6745 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKE------KGLPQIARLLQSGNSDVVRSGASLL 619 (747)
6746 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~------giI~~Ll~LL~s~d~eVr~~AL~aL 619 (747)
6747 .++++.|+.++. +.+..++..++.+|.+++..... ....+.+. ++++.|+.++.+.++.++..++++|
6748 T Consensus 605 ~~~~~~L~~ll~-~~~~~v~~~a~~~L~~L~~~~~~-----~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L 678 (778)
6749 T 3OPB_A 605 KVYWSTIENLML-DENVPLQRSTLELISNMMSHPLT-----IAAKFFNLENPQSLRNFNILVKLLQLSDVESQRAVAAIF 678 (778)
6750 T ss_dssp HHHHHHHHHGGG-CSSHHHHHHHHHHHHHHHTSGGG-----TGGGTSCCSSHHHHHHHHHHHHGGGCSCHHHHHHHHHHH
6751 T ss_pred ccHHHHHHHHhh-CCCHHHHHHHHHHHHHHhcChhH-----HHHHhcCCCChhHHHhHHHHHHHhcCCCHHHHHHHHHHH
6752 Confidence 356777777776 35677788888888888864321 12222332 6778888888777778888888888
6753
6754
6755 Q NP_000290.2 620 SNMSRH-PLL-HRVMG-NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA----K-QYFS-SSMLNNIIN 690 (747)
6756 Q Consensus 620 snLa~~-~e~-~~ll~-~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~----~-~Lve-~giL~~Ll~ 690 (747)
6757 ++++.. +.. ...+. .++++.|+.++.+.. .+..++..++++|.+++...+... . .+.+ .++++.|..
6758 T Consensus 679 ~~l~~~~~~~~~~l~~~~~~i~~L~~~L~~~~----~~~~l~~~a~~aL~~L~~~~~~~~~~~~~~~l~~~~~~~~~L~~ 754 (778)
6759 T 3OPB_A 679 ANIATTIPLIAKELLTKKELIENAIQVFADQI----DDIELRQRLLMLFFGLFEVIPDNGTNEVYPLLQENQKLKDALNM 754 (778)
6760 T ss_dssp HHHHHHCHHHHHHHTTCHHHHHHHHHHHHHTT----TCHHHHHHHHHHHHHHHTTCCSTTTTSCCHHHHSCHHHHHHHHH
6761 T ss_pred HHHHccCHHHHHHHhcCccHHHHHHHHHHhCC----CCHHHHHHHHHHHHHHHhhCCcCCCccchhHHhcCHHHHHHHHH
6762 Confidence 888755 222 23332 567777777776510 145678888888888886533222 0 1222 256777777
6763
6764
6765 Q NP_000290.2 691 LCRSSA-SPKAAEAARLLLSDM 711 (747)
6766 Q Consensus 691 LL~s~~-d~eVr~aAL~aLsnL 711 (747)
6767 ++.... ++.++..+..+|.++
6768 T Consensus 755 ~l~~~~~~~~~~~~~~~~L~~l 776 (778)
6769 T 3OPB_A 755 SLKRGDSGPEFSAAIPVILAKI 776 (778)
6770 T ss_dssp HHSSSSSCSSTTSHHHHHHTTC
6771 T ss_pred HHhhCCCCHHHHHHHHHHHHhc
6772 Confidence 776431 335555566555543
6773
6774
6775 No 127
6776 >4HXT_A De Novo Protein OR329; Structural Genomics, PSI-Biology, Protein Structure; 1.95A {artificial gene}
6777 Probab=97.02 E-value=7.7e-07 Score=80.85 Aligned_cols=113 Identities=29% Similarity=0.332 Sum_probs=76.4 Template_Neff=13.200
6778
6779 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
6780 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
6781 ++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..++.........+.
6782 T Consensus 4 ~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~ 83 (252)
6783 T 4HXT_A 4 VEKLVKLLTSTDSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIV 83 (252)
6784 T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
6785 T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHCCHHHHHHHHhhCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
6786 Confidence 44556666667778888999999988765433333334446677777777777778888999999988765433333333
6787
6788
6789 Q NP_000290.2 327 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
6790 Q Consensus 327 ~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
6791 ..++++.+...+. ..++.++..++.++.+++..
6792 T Consensus 84 ~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 116 (252)
6793 T 4HXT_A 84 DAGGVEVLVKLLT-STDSEVQKEAARALANIASG 116 (252)
6794 T ss_dssp HTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTS
6795 T ss_pred HCChHHHHHHHcc-CCCHHHHHHHHHHHHHHHcC
6796 Confidence 3456667777775 45567777777887777653
6797
6798
6799 No 128
6800 >3GQ2_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.18A {Bos taurus}
6801 Probab=97.01 E-value=9.1e-07 Score=98.43 Aligned_cols=136 Identities=15% Similarity=0.144 Sum_probs=91.1 Template_Neff=10.100
6802
6803 Q NP_000290.2 245 LTIPKAVQYLSS--QDEKYQAIGAYYIQHTCFQDES-----------------AKQQVY-QLGGICKLVDLLRSPNQNVQ 304 (747)
6804 Q Consensus 245 ~iL~~Ll~lL~s--sd~eVr~sAL~aLsnLs~~~~~-----------------~~~~li-~~~IL~~Ll~lL~s~d~eVr 304 (747)
6805 .+++.|+..+.. .+..+...++.+|..++..... ....+. ..+.++.++.++...+..++
6806 T Consensus 60 ~~l~~Li~~L~~~~~d~~~~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Ll~ll~~~~~~~~ 139 (651)
6807 T 3GQ2_A 60 QAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVR 139 (651)
6808 T ss_dssp HHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHCCSSSCC----------CHHHHHHHHHHTSHHHHHTHHHHTTCCCHHHH
6809 T ss_pred cHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCChHhhhhcccccchHHHHHHHHHHHhcCchHHHHHHHccCCCHHHH
6810 Confidence 456667777764 4567788888888888764332 112222 35667777777777777888
6811
6812
6813 Q NP_000290.2 305 QAAAGALRNLVFRSTTNKL-ETR-RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVI 380 (747)
6814 Q Consensus 305 ~~AL~aLs~La~~~~~~~~-~ll-~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~ 380 (747)
6815 ..++.+|..++........ .+. ..+.+..++.++. ..+..++..++.+|.+++.. ......+.. ++++.|+.++.
6816 T Consensus 140 ~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~-~~~~~i~~~a~~~L~~l~~~~~~~~~~l~~~g~~~~L~~ll~ 218 (651)
6817 T 3GQ2_A 140 WPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA-DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIIT 218 (651)
6818 T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHGGGGG-CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
6819 T ss_pred HHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCChHHHHHHHHH
6820 Confidence 9999999988865432211 222 3456778888886 55677888999999999873 333333333 88888888886
6821
6822
6823 Q NP_000290.2 381 I 381 (747)
6824 Q Consensus 381 ~ 381 (747)
6825 .
6826 T Consensus 219 ~ 219 (651)
6827 T 3GQ2_A 219 E 219 (651)
6828 T ss_dssp H
6829 T ss_pred H
6830 Confidence 4
6831
6832
6833 No 129
6834 >3GRL_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.0A {Bos taurus}
6835 Probab=97.01 E-value=9.1e-07 Score=98.43 Aligned_cols=136 Identities=15% Similarity=0.144 Sum_probs=90.5 Template_Neff=10.100
6836
6837 Q NP_000290.2 245 LTIPKAVQYLSS--QDEKYQAIGAYYIQHTCFQDES-----------------AKQQVY-QLGGICKLVDLLRSPNQNVQ 304 (747)
6838 Q Consensus 245 ~iL~~Ll~lL~s--sd~eVr~sAL~aLsnLs~~~~~-----------------~~~~li-~~~IL~~Ll~lL~s~d~eVr 304 (747)
6839 .+++.|+..+.. .+..+...++.+|..++..... ....+. ..+.++.++.++...+..++
6840 T Consensus 60 ~~l~~Li~~L~~~~~d~~~~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Ll~ll~~~~~~~~ 139 (651)
6841 T 3GRL_A 60 QAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVR 139 (651)
6842 T ss_dssp CCHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHHHH
6843 T ss_pred cHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCChHhhhhcccccchHHHHHHHHHHHhcCchHHHHHHHccCCCHHHH
6844 Confidence 456667777764 4567788888888888764332 112222 35667777777777777888
6845
6846
6847 Q NP_000290.2 305 QAAAGALRNLVFRSTTNKL-ETR-RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVI 380 (747)
6848 Q Consensus 305 ~~AL~aLs~La~~~~~~~~-~ll-~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~ 380 (747)
6849 ..++.+|..++........ .+. ..+.+..++.++. ..+..++..++.+|.+++.. ......+.. ++++.|+.++.
6850 T Consensus 140 ~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~-~~~~~i~~~a~~~L~~l~~~~~~~~~~l~~~g~~~~L~~ll~ 218 (651)
6851 T 3GRL_A 140 WPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA-DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIIT 218 (651)
6852 T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGG-CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
6853 T ss_pred HHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCChHHHHHHHHH
6854 Confidence 9999999988865432211 222 3456778888886 55677888999999999873 333333333 88888888886
6855
6856
6857 Q NP_000290.2 381 I 381 (747)
6858 Q Consensus 381 ~ 381 (747)
6859 .
6860 T Consensus 219 ~ 219 (651)
6861 T 3GRL_A 219 E 219 (651)
6862 T ss_dssp H
6863 T ss_pred H
6864 Confidence 4
6865
6866
6867 No 130
6868 >4HXT_A De Novo Protein OR329; Structural Genomics, PSI-Biology, Protein Structure; 1.95A {artificial gene}
6869 Probab=97.01 E-value=8.1e-07 Score=80.69 Aligned_cols=114 Identities=27% Similarity=0.320 Sum_probs=76.2 Template_Neff=13.200
6870
6871 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
6872 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
6873 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+.+.+..++..++.++..++...+.....+
6874 T Consensus 45 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 124 (252)
6875 T 4HXT_A 45 GVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 124 (252)
6876 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
6877 T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCChHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
6878 Confidence 45556666666677888889999998876544333333444667777777777777888889999988876443332233
6879
6880
6881 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
6882 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
6883 ...++++.+...+. ..++.++..++.++..++..
6884 T Consensus 125 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 158 (252)
6885 T 4HXT_A 125 VDAGGVEVLVKLLT-STDSEVQKEAARALANIASG 158 (252)
6886 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTS
6887 T ss_pred HHCCHHHHHHHHhh-CCCHHHHHHHHHHHHHHHcC
6888 Confidence 33356666666665 45567777788888877764
6889
6890
6891 No 131
6892 >4PLS_B Arm00010; PEPTIDE BINDING PROTEIN, designed armadillo; HET: CA; 2.35A {synthetic construct}
6893 Probab=97.00 E-value=8.3e-07 Score=82.05 Aligned_cols=114 Identities=25% Similarity=0.284 Sum_probs=75.7 Template_Neff=13.200
6894
6895 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
6896 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
6897 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.++.++..++.++..++.........+
6898 T Consensus 44 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 123 (281)
6899 T 4PLS_B 44 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 123 (281)
6900 T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
6901 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
6902 Confidence 45566666666777888889999998876443333333444577777777777777888888898888876433332333
6903
6904
6905 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
6906 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
6907 ...++++.+...+. ..++.++..++.++..++..
6908 T Consensus 124 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 157 (281)
6909 T 4PLS_B 124 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASG 157 (281)
6910 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTS
6911 T ss_pred HHCCHHHHHHHHcc-CCCHHHHHHHHHHHHHHHcC
6912 Confidence 33456666777665 44566777777777776653
6913
6914
6915 No 132
6916 >5IZA_A Adenomatous polyposis coli protein, ACE-GLY-GLY-GLU-ALA-LEU-ALA-TRP-NH2; APC, ASEF, Colon CANCER, Drug; 1.5A {Homo sapiens}
6917 Probab=96.99 E-value=9.5e-07 Score=87.41 Aligned_cols=114 Identities=22% Similarity=0.254 Sum_probs=75.1 Template_Neff=12.000
6918
6919 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
6920 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
6921 .+++.+..++.+.++.++..++.++.+++.. .......+...++++.+..++.. .+..++..++.+|.+++.......
6922 T Consensus 127 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~ 206 (354)
6923 T 5IZA_A 127 GCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 206 (354)
6924 T ss_dssp HHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHHHH
6925 T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCChHhH
6926 Confidence 3455666677766778888999999998874 22223334445677778888776 677888889999999886533333
6927
6928
6929 Q NP_000290.2 323 LETRR-QNGIREAVSLLRR---TGNAEIQKQLTGLLWNLS 358 (747)
6930 Q Consensus 323 ~~ll~-~~IL~~Ll~lL~s---s~d~eVr~~AL~aLsnLa 358 (747)
6931 ..+.. .++++.+..++.. ..+..++..++.++..+.
6932 T Consensus 207 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~L~~l~ 246 (354)
6933 T 5IZA_A 207 ADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVS 246 (354)
6934 T ss_dssp HHHHTSTTHHHHHHHHTCSSCSSCCHHHHHHHHHHHHHHH
6935 T ss_pred HHHHhhccHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHH
6936 Confidence 33444 4667777777651 112456666777777765
6937
6938
6939 No 133
6940 >5IZ8_A Adenomatous polyposis coli protein, ACE-ALA-GLY-GLU-ALA-LEU-ALA-ASP-NH2; APC, ASEF, Colon CANCER, Drug; HET: PGE; 3.06A {Homo sapiens}
6941 Probab=96.97 E-value=1e-06 Score=87.19 Aligned_cols=113 Identities=22% Similarity=0.270 Sum_probs=74.6 Template_Neff=12.000
6942
6943 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
6944 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
6945 +++.+..++.+.++.++..++.++.+++.. .......+...++++.+..++.. .+..++..++.+|.+++........
6946 T Consensus 128 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~ 207 (354)
6947 T 5IZ8_A 128 CMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKA 207 (354)
6948 T ss_dssp HHHHHHHGGGSSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTSCHHHHH
6949 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCChHhHH
6950 Confidence 455666677666778888999999998874 22223334445677778888776 6778888899999998865333333
6951
6952
6953 Q NP_000290.2 324 ETRR-QNGIREAVSLLRR---TGNAEIQKQLTGLLWNLS 358 (747)
6954 Q Consensus 324 ~ll~-~~IL~~Ll~lL~s---s~d~eVr~~AL~aLsnLa 358 (747)
6955 .+.. .++++.+..++.. ..+..++..++.++..+.
6956 T Consensus 208 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~L~~l~ 246 (354)
6957 T 5IZ8_A 208 DICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVS 246 (354)
6958 T ss_dssp HHHTSTTHHHHHHHHTTCCCTTSCCHHHHHHHHHHHHHH
6959 T ss_pred HHHhhccHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHH
6960 Confidence 3444 4667777777651 112456666777777765
6961
6962
6963 No 134
6964 >6SA7_B DARPin-Armadillo fusion C8long83; protein fusion, DARPin, Armadillo, shared; 3.3A {synthetic construct}
6965 Probab=96.96 E-value=1.1e-06 Score=90.60 Aligned_cols=135 Identities=25% Similarity=0.264 Sum_probs=91.1 Template_Neff=12.500
6966
6967 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
6968 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
6969 +++.+...+.+.++.++..++.+|.+++.........+...++++.+..++...++.++..++.+|..++.........+
6970 T Consensus 342 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 421 (510)
6971 T 6SA7_B 342 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 421 (510)
6972 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
6973 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
6974 Confidence 34445555556667788888888888876544433334445677788888877778888899999998875544433344
6975
6976
6977 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVII 381 (747)
6978 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~~ 381 (747)
6979 ...++++.+..++. ..++.++..++.++..++.... ....+.. ++++.|..++..
6980 T Consensus 422 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 478 (510)
6981 T 6SA7_B 422 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSH 478 (510)
6982 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGC
6983 T ss_pred HHcCcHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCchHHHHHHHCCHHHHHHHHhhc
6984 Confidence 44567778888886 5677889999999999985432 2222333 667777776653
6985
6986
6987 No 135
6988 >4V3Q_A YIII_M4_AII; DE NOVO PROTEIN, PROTEIN ENGINEERING; HET: GOL, CA; 1.8A {SYNTHETIC CONSTRUCT}
6989 Probab=96.95 E-value=1.1e-06 Score=80.29 Aligned_cols=135 Identities=24% Similarity=0.251 Sum_probs=89.9 Template_Neff=12.900
6990
6991 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
6992 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
6993 .+++.+...+.+.+..++..++.++.+++.........+...++++.+...+.+.+..++..++.++..++.........
6994 T Consensus 92 ~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 171 (247)
6995 T 4V3Q_A 92 GALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQA 171 (247)
6996 T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
6997 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHH
6998 Confidence 34556666666667788888899998887654433333344567777888777777788888999998887654333333
6999
7000
7001 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
7002 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
7003 ....++++.+...+. ..++.++..++.++..++.... ....+.. ++++.|..++.
7004 T Consensus 172 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 228 (247)
7005 T 4V3Q_A 172 VIDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQKQAVKEAGALEKLEQLQS 228 (247)
7006 T ss_dssp HHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT
7007 T ss_pred HHHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHh
7008 Confidence 334456777777776 5567788889999998886532 2222333 66677776665
7009
7010
7011 No 136
7012 >5Z8H_A Adenomatous polyposis coli protein, Peptide; APC, inhibitor, PROTEIN BINDING-INHIBITOR complex; HET: PHQ, GOL; 1.79A {Homo sapiens}
7013 Probab=96.93 E-value=1.2e-06 Score=84.95 Aligned_cols=134 Identities=21% Similarity=0.263 Sum_probs=83.9 Template_Neff=12.500
7014
7015 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNK 322 (747)
7016 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
7017 .+++.+...+.+.++.++..++.++.+++.. .......+...++++.+..++.. .++.++..++.++.+++.......
7018 T Consensus 122 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~ 201 (339)
7019 T 5Z8H_A 122 GCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENK 201 (339)
7020 T ss_pred ChHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCCHHHHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHH
7021 Confidence 3455666667666778888999999998874 22223334445677778887776 577788889999999886444333
7022
7023
7024 Q NP_000290.2 323 LETRR-QNGIREAVSLLRRTGN----AEIQKQLTGLLWNLSS----TDELKEELIA-DALPVLADRV 379 (747)
7025 Q Consensus 323 ~~ll~-~~IL~~Ll~lL~ss~d----~eVr~~AL~aLsnLas----~~~~~~~Lve-giLe~Lv~LL 379 (747)
7026 ..+.. .++++.+..++. ..+ ..++..++.++.++.. .......+.. ++++.++.++
7027 T Consensus 202 ~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l 267 (339)
7028 T 5Z8H_A 202 ADICAVDGALAFLVGTLT-YRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHL 267 (339)
7029 T ss_pred HHHHHhcChHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHhhccCHHHHHHHHHCCHHHHHHHHH
7030 Confidence 34444 466777777775 222 5667777777777752 2222222222 5555555555
7031
7032
7033 No 137
7034 >5AEI_B DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII; DE NOVO PROTEIN, PROTEIN-PEPTIDE COMPLEX; HET: CA, ACT; 1.83A {SYNTHETIC CONSTRUCT}
7035 Probab=96.89 E-value=1.4e-06 Score=80.58 Aligned_cols=112 Identities=27% Similarity=0.322 Sum_probs=75.3 Template_Neff=13.200
7036
7037 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7038 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7039 +++.+...+.+.+..++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
7040 T Consensus 173 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 252 (286)
7041 T 5AEI_B 173 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAV 252 (286)
7042 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
7043 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHccCCCHHHHHHHHHHHHHHhCCCHHHHHHH
7044 Confidence 45556666666677788888999988876544333333344567777777777777888889999988885544333333
7045
7046
7047 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
7048 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
7049 ...++++.+...+. ..++.++..++.++..++
7050 T Consensus 253 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 284 (286)
7051 T 5AEI_B 253 KEAGALEKLEQLQS-HENEKIQKEAQEALEKLQ 284 (286)
7052 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHH
7053 T ss_pred HHcCHHHHHHHHhh-CCCHHHHHHHHHHHHHHh
7054 Confidence 34456677777776 456677777877777664
7055
7056
7057 No 138
7058 >5IZA_A Adenomatous polyposis coli protein, ACE-GLY-GLY-GLU-ALA-LEU-ALA-TRP-NH2; APC, ASEF, Colon CANCER, Drug; 1.5A {Homo sapiens}
7059 Probab=96.88 E-value=1.5e-06 Score=85.84 Aligned_cols=124 Identities=24% Similarity=0.343 Sum_probs=84.2 Template_Neff=12.000
7060
7061 Q NP_000290.2 258 DEKYQAIGAYYIQHTCFQDESAKQQVYQ-LGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKLETRRQNGIREAV 335 (747)
7062 Q Consensus 258 d~eVr~sAL~aLsnLs~~~~~~~~~li~-~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~~ll~~~IL~~Ll 335 (747)
7063 +..++..++.++.+++.........+.. .++++.+..++...++.++..++.++.+++.. .......+...++++.+.
7064 T Consensus 97 ~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~ 176 (354)
7065 T 5IZA_A 97 SITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALM 176 (354)
7066 T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHH
7067 T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHccchHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHH
7068 Confidence 5677888888888887644333333333 46777888888777788889999999998864 222233344456777788
7069
7070
7071 Q NP_000290.2 336 SLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA--DALPVLADRVII 381 (747)
7072 Q Consensus 336 ~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve--giLe~Lv~LL~~ 381 (747)
7073 .++....++.++..++.++.+++.. ......+.. ++++.|+.++..
7074 T Consensus 177 ~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 225 (354)
7075 T 5IZA_A 177 ECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTY 225 (354)
7076 T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTSTTHHHHHHHHTCS
7077 T ss_pred HHHHhcCCHHHHHHHHHHHHHHHcCChHhHHHHHhhccHHHHHHHHHhh
7078 Confidence 8876225677888899999999876 444434433 667777777664
7079
7080
7081 No 139
7082 >5IZ8_A Adenomatous polyposis coli protein, ACE-ALA-GLY-GLU-ALA-LEU-ALA-ASP-NH2; APC, ASEF, Colon CANCER, Drug; HET: PGE; 3.06A {Homo sapiens}
7083 Probab=96.88 E-value=1.6e-06 Score=85.78 Aligned_cols=124 Identities=24% Similarity=0.343 Sum_probs=84.2 Template_Neff=12.000
7084
7085 Q NP_000290.2 258 DEKYQAIGAYYIQHTCFQDESAKQQVYQ-LGGICKLVDLLRSPNQNVQQAAAGALRNLVFR-STTNKLETRRQNGIREAV 335 (747)
7086 Q Consensus 258 d~eVr~sAL~aLsnLs~~~~~~~~~li~-~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~-~~~~~~~ll~~~IL~~Ll 335 (747)
7087 +..++..++.++.+++.........+.. .++++.+..++...++.++..++.++.+++.. .......+...++++.+.
7088 T Consensus 97 ~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~ 176 (354)
7089 T 5IZ8_A 97 SITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALM 176 (354)
7090 T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGSSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHH
7091 T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHccchHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCChhHHHHHHHCCHHHHHH
7092 Confidence 5677888888888887644333333333 46777888888777788888999999998864 222233344456777788
7093
7094
7095 Q NP_000290.2 336 SLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA--DALPVLADRVII 381 (747)
7096 Q Consensus 336 ~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve--giLe~Lv~LL~~ 381 (747)
7097 .++....++.++..++.+|.+++.. ......+.. ++++.|+.++..
7098 T Consensus 177 ~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 225 (354)
7099 T 5IZ8_A 177 ECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTY 225 (354)
7100 T ss_dssp HHHHHCCSHHHHHHHHHHHHHHHTSCHHHHHHHHTSTTHHHHHHHHTTC
7101 T ss_pred HHHHhcCCHHHHHHHHHHHHHHHcCChHhHHHHHhhccHHHHHHHHHhh
7102 Confidence 8876225677888899999999876 444333433 667777777664
7103
7104
7105 No 140
7106 >3NMZ_A APC variant protein, Rho guanine; protein-protein complex, armadillo repeats, CELL; 3.01A {Homo sapiens}
7107 Probab=96.87 E-value=1.6e-06 Score=88.90 Aligned_cols=135 Identities=18% Similarity=0.233 Sum_probs=88.1 Template_Neff=12.000
7108
7109 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQ-LGGICKLVDLLR----SPNQNVQQAAAGALRNLV---F 316 (747)
7110 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~-~~IL~~Ll~lL~----s~d~eVr~~AL~aLs~La---~ 316 (747)
7111 +++.+..++. ..+..++..++.+|.+++...+.....+.. .++++.+..++. ..+..++..++.++.+++ .
7112 T Consensus 287 ~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~a~~~l~~l~~~~~ 366 (458)
7113 T 3NMZ_A 287 SVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIA 366 (458)
7114 T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCchhHHHHHHhcChHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHhc
7115 Confidence 4555666665 456778888999999988743333333333 566777777765 224566777888887765 2
7116
7117
7118 Q NP_000290.2 317 RSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS-TDELKEELIA-DALPVLADRVII 381 (747)
7119 Q Consensus 317 ~~~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas-~~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
7120 ........+...++++.+..++. ..++.++..++.+|..++. .......+.. ++++.|..++..
7121 T Consensus 367 ~~~~~~~~l~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~~~~L~~ll~~ 432 (458)
7122 T 3NMZ_A 367 TNEDHRQILRENNCLQTLLQHLK-SHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHS 432 (458)
7123 T ss_pred CCHHHHHHHHHCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHHhC
7124 Confidence 22223333344467777888886 5567889999999999987 3444444544 788888887754
7125
7126
7127 No 141
7128 >6SA7_B DARPin-Armadillo fusion C8long83; protein fusion, DARPin, Armadillo, shared; 3.3A {synthetic construct}
7129 Probab=96.87 E-value=1.6e-06 Score=89.20 Aligned_cols=134 Identities=26% Similarity=0.306 Sum_probs=91.2 Template_Neff=12.500
7130
7131 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7132 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7133 +++.+...+.+.+..++..++.+|.+++.........+...++++.+...+.+.++.++..++.+|..++.........+
7134 T Consensus 300 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 379 (510)
7135 T 6SA7_B 300 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 379 (510)
7136 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
7137 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHHHhCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHHHH
7138 Confidence 45566666666677888889999998876544333344445677778888877778888899999999886544333333
7139
7140
7141 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
7142 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
7143 ...++++.+...+. ..++.++..++.+|..++.... ....+.. ++++.|+.++.
7144 T Consensus 380 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 435 (510)
7145 T 6SA7_B 380 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 435 (510)
7146 T ss_dssp HHTTHHHHHHHHHT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
7147 T ss_pred HHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHhc
7148 Confidence 44467777887776 5577888889999998865432 2223333 66777777664
7149
7150
7151 No 142
7152 >5TBK_C Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
7153 Probab=96.87 E-value=1.7e-06 Score=90.04 Aligned_cols=367 Identities=17% Similarity=0.192 Sum_probs=215.7 Template_Neff=12.200
7154
7155 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
7156 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
7157 +++.+...+... ++.++..++.++..++.........+...++++.+..++.+.++.++..++.++..++.........
7158 T Consensus 115 ~i~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 194 (521)
7159 T 5TBK_C 115 ILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDY 194 (521)
7160 T ss_dssp HHHHHHHHHHCCSCHHHHHHHHHHHHHHHTSCHHHHHHHHTTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHHHH
7161 T ss_pred cHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
7162 Confidence 445555555543 6678888888888887654333333334467777888887777888999999999888654433333
7163
7164
7165 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
7166 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
7167 +...+++..+...+....+..++..++.++..++.......... .++++.+..++... ++++
7168 T Consensus 195 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v 258 (521)
7169 T 5TBK_C 195 VISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHT----------------DVNI 258 (521)
7170 T ss_dssp HHHTTCHHHHHTTCCTTSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCS----------------CHHH
7171 T ss_pred HHHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhhCC----------------CHHH
7172 Confidence 33445677777777533344678888888888876533221111 15566666665431 2334
7173
7174
7175 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
7176 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
7177 ...+..+|..-... .+ ..++.+. -.+++..|...+.. .+..-...++..|.++
7178 T Consensus 259 ~~~a~~~L~~l~~~------~~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l 311 (521)
7179 T 5TBK_C 259 LVDTVWALSYLTDA------GN--------------EQIQMVI-DSGIVPHLVPLLSH------QEVKVQTAALRAVGNI 311 (521)
7180 T ss_dssp HHHHHHHHHHHHHH------CH--------------HHHHHHH-HTTCHHHHGGGGGC------SSHHHHHHHHHHHHHH
7181 T ss_pred HHHHHHHHHHHhcc------Ch--------------HHHHHHH-HCChHHHHHHHhcC------CCHHHHHHHHHHHHHH
7182 Confidence 33343333221100 00 0000000 02333434333321 0111112222223332
7183
7184
7185 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
7186 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
7187 ...- ......+.+.++++.|..++. +.++
7188 T Consensus 312 ~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~ 340 (521)
7189 T 5TBK_C 312 VTGT--------------------------------------------------DEQTQVVLNCDALSHFPALLT-HPKE 340 (521)
7190 T ss_dssp HTSC--------------------------------------------------HHHHHHHHHTTCGGGHHHHHT-CSCH
7191 T ss_pred HcCC--------------------------------------------------HHHHHHHHhCCHHHhHHHHhh-CCCH
7192 Confidence 2110 000112234467788888887 4677
7193
7194
7195 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGNQVFPE 639 (747)
7196 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~giI~~ 639 (747)
7197 .++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...++++.
7198 T Consensus 341 ~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~~~~ 415 (521)
7199 T 5TBK_C 341 KINKEAVWFLSNITAGNQQ-----QVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPP 415 (521)
7200 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHTTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTTCHHH
7201 T ss_pred HHHHHHHHHHHHHhCCCHH-----HHHHHHHCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHH
7202 Confidence 8888999999999865332 223334557888888888887888999999999999864 2 11 22233467788
7203
7204
7205 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA----KQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
7206 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~----~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
7207 |..++.. .++.++..++.+|.+++...+... ..+.+.++++.|..++.+. ++.++..++.+|.+++...
7208 T Consensus 416 L~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a~~~L~~l~~~~ 488 (521)
7209 T 5TBK_C 416 FCNLLTV------KDAQVVQVVLDGLSNILKMAEDEAETIGNLIEECGGLEKIEQLQNHE-NEDIYKLAYEIIDQFFSSD 488 (521)
7210 T ss_dssp HHGGGGS------SCHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHTTHHHHHHHHCSTT-CHHHHHHHHHHHHHHCCC-
7211 T ss_pred HHHHcCC------CCHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHCCHHHHHHHHhcCC-CHHHHHHHHHHHHHhcCCC
7212 Confidence 8888765 367888899999999887533211 2233446778888888766 7889999999999999766
7213
7214
7215 Q NP_000290.2 716 ELQ 718 (747)
7216 Q Consensus 716 ~~~ 718 (747)
7217 +..
7218 T Consensus 489 ~~~ 491 (521)
7219 T 5TBK_C 489 DID 491 (521)
7220 T ss_dssp ---
7221 T ss_pred CCC
7222 Confidence 543
7223
7224
7225 No 143
7226 >5TBK_D Importin subunit alpha-3, Regulator of; Nuclear Import, Importin alpha, RCC1; 3.45A {Homo sapiens}
7227 Probab=96.87 E-value=1.7e-06 Score=90.04 Aligned_cols=367 Identities=17% Similarity=0.192 Sum_probs=215.0 Template_Neff=12.200
7228
7229 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
7230 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
7231 +++.+...+... ++.++..++.++..++.........+...++++.+..++.+.++.++..++.++..++.........
7232 T Consensus 115 ~i~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 194 (521)
7233 T 5TBK_D 115 ILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQAVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDY 194 (521)
7234 T ss_dssp HHHHHHHHHHCCSCHHHHHHHHHHHHHHHTSCHHHHHHHHTTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHHHH
7235 T ss_pred cHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHH
7236 Confidence 445555555543 6678888888888887654333333334467777888887777888999999999888654433333
7237
7238
7239 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELI--ADALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 402 (747)
7240 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lv--egiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~ 402 (747)
7241 +...+++..+...+....+..++..++.++..++.......... .++++.+..++... ++++
7242 T Consensus 195 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----------------~~~v 258 (521)
7243 T 5TBK_D 195 VISLGVVKPLLSFISPSIPITFLRNVTWVMVNLCRHKDPPPPMETIQEILPALCVLIHHT----------------DVNI 258 (521)
7244 T ss_dssp HHHTCCHHHHHTTCCTTSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCS----------------CHHH
7245 T ss_pred HHHCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhhCC----------------CHHH
7246 Confidence 33445677777777533344678888888888876533221111 15566666665431 2334
7247
7248
7249 Q NP_000290.2 403 FFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 482 (747)
7250 Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (747)
7251 ...+..+|..-... .+ ..++.+. -.+++..|...+.. .+..-...++..|.++
7252 T Consensus 259 ~~~a~~~L~~l~~~------~~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~v~~~a~~~L~~l 311 (521)
7253 T 5TBK_D 259 LVDTVWALSYLTDA------GN--------------EQIQMVI-DSGIVPHLVPLLSH------QEVKVQTAALRAVGNI 311 (521)
7254 T ss_dssp HHHHHHHHHHHHHH------CH--------------HHHHHHH-HTTCHHHHGGGGGC------SSHHHHHHHHHHHHHH
7255 T ss_pred HHHHHHHHHHHhcc------Ch--------------HHHHHHH-HCChHHHHHHHhcC------CCHHHHHHHHHHHHHH
7256 Confidence 33343333221100 00 0000000 02333434333321 0111112222223332
7257
7258
7259 Q NP_000290.2 483 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKD 562 (747)
7260 Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~ 562 (747)
7261 ...- ......+.+.++++.|..++. +.++
7262 T Consensus 312 ~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~~ 340 (521)
7263 T 5TBK_D 312 VTGT--------------------------------------------------DEQTQVVLNCDALSHFPALLT-HPKE 340 (521)
7264 T ss_dssp HTSC--------------------------------------------------HHHHHHHHHTTCGGGHHHHHH-CSCH
7265 T ss_pred HcCC--------------------------------------------------HHHHHHHHhCCHHHhHHHHhh-CCCH
7266 Confidence 2110 000112234467788888887 4677
7267
7268
7269 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P-LL-HRVMGNQVFPE 639 (747)
7270 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~-e~-~~ll~~giI~~ 639 (747)
7271 .++..++.+|.+++...+. ....+...++++.|..++.+.++.++..++.+|.+++.. . .. ..+...++++.
7272 T Consensus 341 ~v~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~~~~ 415 (521)
7273 T 5TBK_D 341 KINKEAVWFLSNITAGNQQ-----QVQAVIDANLVPMIIHLLDKGDFGTQKEAAWAISNLTISGRKDQVAYLIQQNVIPP 415 (521)
7274 T ss_dssp HHHHHHHHHHHHHTTSCHH-----HHHHHHTTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTTCHHH
7275 T ss_pred HHHHHHHHHHHHHhCCCHH-----HHHHHHHCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHH
7276 Confidence 8888999999999865332 223334557888888888887888999999999999864 2 11 22233467788
7277
7278
7279 Q NP_000290.2 640 VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA----KQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
7280 Q Consensus 640 Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~----~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
7281 |..++.. .++.++..++.+|.+++...+... ..+.+.++++.|..++.+. ++.++..++.+|.+++...
7282 T Consensus 416 L~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~l~~ll~~~-~~~v~~~a~~~L~~l~~~~ 488 (521)
7283 T 5TBK_D 416 FCNLLTV------KDAQVVQVVLDGLSNILKMAEDEAETIGNLIEECGGLEKIEQLQNHE-NEDIYKLAYEIIDQFFSSD 488 (521)
7284 T ss_dssp HHGGGGS------SCHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHCC--
7285 T ss_pred HHHHcCC------CCHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHCCHHHHHHHHhcCC-CHHHHHHHHHHHHHhcCCC
7286 Confidence 8888765 367888899999999887533211 2233446778888888766 7889999999999999766
7287
7288
7289 Q NP_000290.2 716 ELQ 718 (747)
7290 Q Consensus 716 ~~~ 718 (747)
7291 +..
7292 T Consensus 489 ~~~ 491 (521)
7293 T 5TBK_D 489 DID 491 (521)
7294 T ss_dssp ---
7295 T ss_pred CCC
7296 Confidence 543
7297
7298
7299 No 144
7300 >6HB1_A Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; 2.33A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
7301 Probab=96.86 E-value=1.8e-06 Score=89.00 Aligned_cols=169 Identities=9% Similarity=0.050 Sum_probs=120.8 Template_Neff=10.100
7302
7303 Q NP_000290.2 547 DAIRTYLNLMGK--SKKDATLEACAGALQNLTASKGLMSSGMSQLIGL--KEKGLPQIARLLQSGNSDVVRSGASLLSNM 622 (747)
7304 Q Consensus 547 G~I~~LL~LL~s--s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~lli--e~giI~~Ll~LL~s~d~eVr~~AL~aLsnL 622 (747)
7305 ++++.|+.++.. +.++.++..++++|.+++.... ....+. +.++++.|+.++.+.+..++..++++|.++
7306 T Consensus 51 ~~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~~~------~~~~l~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~nl 124 (369)
7307 T 6HB1_A 51 RPIKDIIKMIMDPEHGTRVIIQQGVTILVNLSEDKL------VRNIILSDDKKFLKFLVWKIVDLTNPNADIMCILLSNL 124 (369)
7308 T ss_dssp HHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHTTSHH------HHHCCCCCSTHHHHHHHHHHHCTTCTTHHHHHHHHHHH
7309 T ss_pred hHHHHHHHHHhCcccCcHHHHHHHHHHHHHHhCCHH------HHHHHhhcChHHHHHHHHHHHcCCCccHHHHHHHHHHH
7310 Confidence 588999999952 1356788899999999986532 244445 689999999999887778889999999999
7311
7312
7313 Q NP_000290.2 623 SRHPLLH-RV-------------------------MGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA 676 (747)
7314 Q Consensus 623 a~~~e~~-~l-------------------------l~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~ 676 (747)
7315 +...... .+ ...++++.|+.++.........++.++..++++|.+|+.. +..+
7316 T Consensus 125 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~Lv~~l~~~~~~~~~~~~~~~~a~~~l~~l~~~-~~~~ 203 (369)
7317 T 6HB1_A 125 AKDDGILAVLNIKRNSSGEEVDDGLKLAALNKEVFKSLRAMDCLMDCFVKGYDKKLTKYASFNYLAFFFADISRF-KLGR 203 (369)
7318 T ss_dssp TTSGGGGGGGGCBCSCSSSEEETTEEECCCCTTTCCCSBHHHHHHHHHHHCGGGSSCSSCCCTTHHHHHHHHTTS-HHHH
7319 T ss_pred ccChhHHHHHhhcCCCCCCchhhhHHHHHHcHHHHHHhhHHHHHHHHHhhcCcccCCchhchHHHHHHHHHHcCC-HHHH
7320 Confidence 9864332 22 1246778888887652000000456788899999999875 5666
7321
7322
7323 Q NP_000290.2 677 KQYFSSS------MLNNIINLCR-SSASPKAAEAARLLLSDMWSSKELQGVLRQ 723 (747)
7324 Q Consensus 677 ~~Lve~g------iL~~Ll~LL~-s~~d~eVr~aAL~aLsnL~~~~~~~~~~~~ 723 (747)
7325 ..+.+.+ .+..++.++. +. +..++..++.+|.+++.+.+....+..
7326 T Consensus 204 ~~l~~~g~~~~~~~l~~ll~~l~~~~-~~~~~~~a~~~L~nl~~~~~~~~~i~~ 256 (369)
7327 T 6HB1_A 204 MYFIEEQEYDGVVPISKLLVFTEKYD-AKVRREGVASTIKNSLFDSETHERLLK 256 (369)
7328 T ss_dssp HHHHSCCTTTCCCGGGGTGGGGGCTT-CHHHHHHHHHHHHHHTCCGGGHHHHHH
7329 T ss_pred HHHhhcccccCcccHHHHHHHhcccC-CHHHHHHHHHHHHHHhcCHHHHHHHhc
7330 Confidence 6677766 4666666665 34 678899999999999988775544443
7331
7332
7333 No 145
7334 >6HB2_D Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; HET: MSE; 2.7A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
7335 Probab=96.86 E-value=1.8e-06 Score=89.00 Aligned_cols=169 Identities=9% Similarity=0.050 Sum_probs=120.8 Template_Neff=10.100
7336
7337 Q NP_000290.2 547 DAIRTYLNLMGK--SKKDATLEACAGALQNLTASKGLMSSGMSQLIGL--KEKGLPQIARLLQSGNSDVVRSGASLLSNM 622 (747)
7338 Q Consensus 547 G~I~~LL~LL~s--s~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~lli--e~giI~~Ll~LL~s~d~eVr~~AL~aLsnL 622 (747)
7339 ++++.|+.++.. +.++.++..++++|.+++.... ....+. +.++++.|+.++.+.+..++..++++|.++
7340 T Consensus 51 ~~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~~~------~~~~l~~~~~g~i~~L~~ll~~~~~~~~~~a~~~L~nl 124 (369)
7341 T 6HB2_D 51 RPIKDIIKMIMDPEHGTRVIIQQGVTILVNLSEDKL------VRNIILSDDKKFLKFLVWKIVDLTNPNADIMCILLSNL 124 (369)
7342 T ss_dssp HHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHTTSHH------HHHCCCCCCTHHHHHHHHHHSCTTCTTHHHHHHHHHHH
7343 T ss_pred hHHHHHHHHHhCcccCcHHHHHHHHHHHHHHhCCHH------HHHHHhhcChHHHHHHHHHHHcCCCccHHHHHHHHHHH
7344 Confidence 588999999952 1356788899999999986532 244445 689999999999887778889999999999
7345
7346
7347 Q NP_000290.2 623 SRHPLLH-RV-------------------------MGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA 676 (747)
7348 Q Consensus 623 a~~~e~~-~l-------------------------l~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~ 676 (747)
7349 +...... .+ ...++++.|+.++.........++.++..++++|.+|+.. +..+
7350 T Consensus 125 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~Lv~~l~~~~~~~~~~~~~~~~a~~~l~~l~~~-~~~~ 203 (369)
7351 T 6HB2_D 125 AKDDGILAVLNIKRNSSGEEVDDGLKLAALNKEVFKSLRAMDCLMDCFVKGYDKKLTKYASFNYLAFFFADISRF-KLGR 203 (369)
7352 T ss_dssp TTSGGGGGGGGCBCSCSSSEEETTEEECCCCTTTCCCSBHHHHHHHHHHHHGGGSSCSSCCCTTHHHHHHHHTTS-HHHH
7353 T ss_pred ccChhHHHHHhhcCCCCCCchhhhHHHHHHcHHHHHHhhHHHHHHHHHhhcCcccCCchhchHHHHHHHHHHcCC-HHHH
7354 Confidence 9864332 22 1246778888887652000000456788899999999875 5666
7355
7356
7357 Q NP_000290.2 677 KQYFSSS------MLNNIINLCR-SSASPKAAEAARLLLSDMWSSKELQGVLRQ 723 (747)
7358 Q Consensus 677 ~~Lve~g------iL~~Ll~LL~-s~~d~eVr~aAL~aLsnL~~~~~~~~~~~~ 723 (747)
7359 ..+.+.+ .+..++.++. +. +..++..++.+|.+++.+.+....+..
7360 T Consensus 204 ~~l~~~g~~~~~~~l~~ll~~l~~~~-~~~~~~~a~~~L~nl~~~~~~~~~i~~ 256 (369)
7361 T 6HB2_D 204 MYFIEEQEYDGVVPISKLLVFTEKYD-AKVRREGVASTIKNSLFDSETHERLLK 256 (369)
7362 T ss_dssp HHHHSCCTTTCSCTHHHHGGGGGCTT-CHHHHHHHHHHHHHHTCSGGGHHHHHH
7363 T ss_pred HHHhhcccccCcccHHHHHHHhcccC-CHHHHHHHHHHHHHHhcCHHHHHHHhc
7364 Confidence 6677766 4666666665 34 678899999999999988775544443
7365
7366
7367 No 146
7368 >5MFD_C YIIIM''6AII, Capsid decoration protein,pD_(KR)5; Designed armadillo repeat protein, peptide; HET: CA; 2.3A {synthetic construct}
7369 Probab=96.84 E-value=1.8e-06 Score=81.45 Aligned_cols=114 Identities=25% Similarity=0.284 Sum_probs=77.1 Template_Neff=13.300
7370
7371 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7372 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7373 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..+..........+
7374 T Consensus 47 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 126 (328)
7375 T 5MFD_C 47 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 126 (328)
7376 T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
7377 T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHhcCcHHHHHHHhhcCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
7378 Confidence 45566666777777888899999988876543333333344567777777777777888889999988876533333333
7379
7380
7381 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
7382 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
7383 ...++++.+...+. ..++.++..++.++..+...
7384 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 160 (328)
7385 T 5MFD_C 127 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASG 160 (328)
7386 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTS
7387 T ss_pred HHCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcC
7388 Confidence 33456667777775 45667777788888777653
7389
7390
7391 No 147
7392 >6SA7_B DARPin-Armadillo fusion C8long83; protein fusion, DARPin, Armadillo, shared; 3.3A {synthetic construct}
7393 Probab=96.84 E-value=1.8e-06 Score=88.77 Aligned_cols=115 Identities=27% Similarity=0.318 Sum_probs=78.7 Template_Neff=12.500
7394
7395 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7396 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7397 +++.+...+.+.++.++..++.+|..++.........+...++++.+..++.+.++.++..++.++..++.........+
7398 T Consensus 384 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 463 (510)
7399 T 6SA7_B 384 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAV 463 (510)
7400 T ss_dssp HHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
7401 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCchHHHHH
7402 Confidence 34445555555667778888888888865544433344445677888888887788889999999999985544433333
7403
7404
7405 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD 361 (747)
7406 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~ 361 (747)
7407 ...++++.+..++. +.++.++..++.++..+....
7408 T Consensus 464 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~ 498 (510)
7409 T 6SA7_B 464 KEAGALEKLEQLQS-HENEKIQKEAQEALEKLGSGG 498 (510)
7410 T ss_dssp HHTTHHHHHHHGGG-CSSHHHHHHHHHHHHHHTC--
7411 T ss_pred HHCCHHHHHHHHhh-ccchHHHHHHHHHHHHHhhcc
7412 Confidence 34456777777776 556788888999888887643
7413
7414
7415 No 148
7416 >6S9O_F designed Armadillo repeat protein with; peptide binder, repeat protein, designed; HET: CA, EDO; 3.17A {synthetic construct}
7417 Probab=96.77 E-value=2.5e-06 Score=81.50 Aligned_cols=115 Identities=28% Similarity=0.317 Sum_probs=77.6 Template_Neff=13.100
7418
7419 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
7420 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
7421 .+++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++.........
7422 T Consensus 46 ~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 125 (344)
7423 T 6S9O_F 46 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALRNIASGGNEQIQA 125 (344)
7424 T ss_dssp TCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHSCSCHHHHHHHHHHHHHHTTSCHHHHHH
7425 T ss_pred ChHHHHHHHcCCCCHHHHHHHHHHHHHHhcCChhHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCchHHHH
7426 Confidence 34556666677777788889999999887654333333334456777777777777788888999998887643333333
7427
7428
7429 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
7430 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
7431 +...++++.+...+. ..++.++..++.++..++..
7432 T Consensus 126 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 160 (344)
7433 T 6S9O_F 126 VIDAGALPALVQLLS-SPNEQILSSALGALSNIASG 160 (344)
7434 T ss_dssp HHHTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTS
7435 T ss_pred HHhCCHHHHHHHHhc-CCcHHHHHHHHHHHHHHHcC
7436 Confidence 333456677777775 45667777888888877653
7437
7438
7439 No 149
7440 >1XM9_A plakophilin 1 Plakophilin-1; armadillo repeat, CELL ADHESION; 2.8A {Homo sapiens} SCOP: a.118.1.24
7441 Probab=96.77 E-value=2.5e-06 Score=86.12 Aligned_cols=167 Identities=15% Similarity=0.182 Sum_probs=108.5 Template_Neff=12.600
7442
7443 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL----------------QS 606 (747)
7444 Q Consensus 543 lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL----------------~s 606 (747)
7445 +++.++++.|+.++....++.++..++.+|.+++.... ....+. .++++.|+.++ ..
7446 T Consensus 82 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~------~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 154 (457)
7447 T 1XM9_A 82 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE------LKEELI-ADALPVLADRVIIPFSGWCDGNSNMSREV 154 (457)
7448 T ss_dssp HHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSS------THHHHH-HHHHHHCCCCCCHHHHTCC---------C
7449 T ss_pred HHhcChHHHHHHHhhhCCCHHHHHHHHHHHHHHhCCHH------HHHHHH-cchHHHHHHHhccccCCCCCCCCCccccc
7450 Confidence 45677888888888633566788889999999987422 123333 57888888888 56
7451
7452
7453 Q NP_000290.2 607 GNSDVVRSGASLLSNMSRHPLL-HRVMG-NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP----------- 673 (747)
7454 Q Consensus 607 ~d~eVr~~AL~aLsnLa~~~e~-~~ll~-~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~----------- 673 (747)
7455 .++.++..++++|.+++..... ..+.. .++++.++.++.........+..++..++.+|.+++...+
7456 T Consensus 155 ~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 234 (457)
7457 T 1XM9_A 155 VDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLE 234 (457)
7458 T ss_dssp CCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHH
7459 T ss_pred CCHHHHHHHHHHHHHHccChHHHHHHHhcccHHHHHHHHHHHhhhcCcCCHHHHHHHHHHHHHHhcccccCCCcchhhhh
7460 Confidence 6788899999999999976433 22332 3567777777764100000256788889999999886311
7461
7462
7463 Q NP_000290.2 674 ---------------------------------------QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
7464 Q Consensus 674 ---------------------------------------e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
7465 .....+...++++.++.++....+..++..++.+|.+++..
7466 T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~ 314 (457)
7467 T 1XM9_A 235 YNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTAS 314 (457)
7468 T ss_dssp HTC----------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTC
7469 T ss_pred hcccccccccccccccCcccchhccccccCCCCcccCCCchhHHhhchhHHHHHHHHhccCCCHHHHHHHHHHHHHHHhc
7470 Confidence 11122334456667777766532556677788888887765
7471
7472
7473 Q NP_000290.2 715 KE 716 (747)
7474 Q Consensus 715 ~~ 716 (747)
7475 .+
7476 T Consensus 315 ~~ 316 (457)
7477 T 1XM9_A 315 KG 316 (457)
7478 T ss_dssp SS
7479 T ss_pred cc
7480 Confidence 54
7481
7482
7483 No 150
7484 >4HXT_A De Novo Protein OR329; Structural Genomics, PSI-Biology, Protein Structure; 1.95A {artificial gene}
7485 Probab=96.77 E-value=2.5e-06 Score=77.32 Aligned_cols=114 Identities=27% Similarity=0.311 Sum_probs=76.9 Template_Neff=13.200
7486
7487 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7488 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7489 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+.+.++.++..++.++..++...+.....+
7490 T Consensus 129 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 208 (252)
7491 T 4HXT_A 129 GVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAI 208 (252)
7492 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHH
7493 T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
7494 Confidence 34555555666667788888888888876543333333344567777777777777888889999988886544333333
7495
7496
7497 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
7498 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
7499 ...++++.+...+. ..++.++..++.++.+++..
7500 T Consensus 209 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~ 242 (252)
7501 T 4HXT_A 209 VDAGGVEVLQKLLT-STDSEVQKEAQRALENIKSG 242 (252)
7502 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHHHT
7503 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcC
7504 Confidence 33356777777776 45677888888888888764
7505
7506
7507 No 151
7508 >6SA6_A DARPin-Armadillo fusion A5; protein fusion, DARPin, Armadillo, shared; HET: EDO; 1.6A {synthetic construct}
7509 Probab=96.73 E-value=3e-06 Score=84.23 Aligned_cols=132 Identities=23% Similarity=0.240 Sum_probs=87.4 Template_Neff=12.400
7510
7511 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRR 327 (747)
7512 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~ 327 (747)
7513 ..++..+.+.+..++..++.++.+++.........+...++++.+..++.+.++.++..++.++.+++.........+..
7514 T Consensus 160 ~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 239 (397)
7515 T 6SA6_A 160 AALVLKLNANDDQIIQEALWKLGNHASGGNLRIQWVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVID 239 (397)
7516 T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHTTTHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH
7517 T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHhhCCchHHHHHHHCCcHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHH
7518 Confidence 34445555567788889999999988755444444445567788888888777788889999999988654443334444
7519
7520
7521 Q NP_000290.2 328 QNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
7522 Q Consensus 328 ~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
7523 .++++.+..++. ..++.++..++.++.+++..... ...+.. ++++.|+.+|.
7524 T Consensus 240 ~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 293 (397)
7525 T 6SA6_A 240 AGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLS 293 (397)
7526 T ss_dssp TTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT
7527 T ss_pred CCcHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCcHHHHHHHHhCChHHHHHHHhc
7528 Confidence 567777888876 55677888888888888654222 222222 45555555543
7529
7530
7531 No 152
7532 >3NMZ_A APC variant protein, Rho guanine; protein-protein complex, armadillo repeats, CELL; 3.01A {Homo sapiens}
7533 Probab=96.71 E-value=3.3e-06 Score=86.51 Aligned_cols=135 Identities=22% Similarity=0.327 Sum_probs=88.0 Template_Neff=12.000
7534
7535 Q NP_000290.2 246 TIPKAVQYLSSQ-----------DEKYQAIGAYYIQHTCFQDESAKQQVYQ-LGGICKLVDLLRSPNQNVQQAAAGALRN 313 (747)
7536 Q Consensus 246 iL~~Ll~lL~ss-----------d~eVr~sAL~aLsnLs~~~~~~~~~li~-~~IL~~Ll~lL~s~d~eVr~~AL~aLs~ 313 (747)
7537 +++.+..++... +..++..++.+|.+++.........+.. .++++.+..++...+..++..++.++.+
7538 T Consensus 190 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~L~~ 269 (458)
7539 T 3NMZ_A 190 GLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRN 269 (458)
7540 T ss_pred hHHHHHHHHhccccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHH
7541 Confidence 445555555543 5678888999999988754433332333 4677888888877778889999999999
7542
7543
7544 Q NP_000290.2 314 LVFRST-TNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELI--ADALPVLADRVI 380 (747)
7545 Q Consensus 314 La~~~~-~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lv--egiLe~Lv~LL~ 380 (747)
7546 ++.... .....+...++++.+..++....+..++..++.++.+++.. ......+. .++++.|+.++.
7547 T Consensus 270 l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 340 (458)
7548 T 3NMZ_A 270 LSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLT 340 (458)
7549 T ss_pred HHCCCChhHHHHHHHCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCchhHHHHHHhcChHHHHHHHHc
7550 Confidence 886543 22333444457777777775234567888889999998873 33333333 256666666654
7551
7552
7553 No 153
7554 >6HB1_A Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; 2.33A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
7555 Probab=96.61 E-value=5.3e-06 Score=85.37 Aligned_cols=93 Identities=22% Similarity=0.297 Sum_probs=66.7 Template_Neff=10.100
7556
7557 Q NP_000290.2 287 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ--NGIREAVSLLRR--TGNAEIQKQLTGLLWNLSSTDE 362 (747)
7558 Q Consensus 287 ~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~--~IL~~Ll~lL~s--s~d~eVr~~AL~aLsnLas~~~ 362 (747)
7559 +.++.++.++...++.++..++.++.++..... ...+... +.++.|+.++.. ..++.++..++.+|.+++....
7560 T Consensus 9 ~~i~~lv~lL~~~~~~v~~~a~~~L~~l~~~~~--~~~l~~~~~~~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~~~ 86 (369)
7561 T 6HB1_A 9 SQLNELVEFLHSPQPAVRQIAIDNLVGFSAGPT--SKVFKNDSYRPIKDIIKMIMDPEHGTRVIIQQGVTILVNLSEDKL 86 (369)
7562 T ss_dssp CCHHHHHHGGGCSCHHHHHHHHHHHGGGGSSGG--GGGGGHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHTTSHH
7563 T ss_pred hhHHHHHHHhcCCCHHHHHHHHHHHhHhcCCCC--chhhhcCCchHHHHHHHHHhCcccCcHHHHHHHHHHHHHHhCCHH
7564 Confidence 456677777777777888899999988876543 2333333 478888888852 1356788899999999987655
7565
7566
7567 Q NP_000290.2 363 LKEELI--A-DALPVLADRVII 381 (747)
7568 Q Consensus 363 ~~~~Lv--e-giLe~Lv~LL~~ 381 (747)
7569 ....+. + ++++.|+.++..
7570 T Consensus 87 ~~~~l~~~~~g~i~~L~~ll~~ 108 (369)
7571 T 6HB1_A 87 VRNIILSDDKKFLKFLVWKIVD 108 (369)
7572 T ss_dssp HHHCCCCCSTHHHHHHHHHHHC
7573 T ss_pred HHHHHhhcChHHHHHHHHHHHc
7574 Confidence 556666 5 888888888874
7575
7576
7577 No 154
7578 >6HB2_D Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; HET: MSE; 2.7A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
7579 Probab=96.61 E-value=5.3e-06 Score=85.37 Aligned_cols=93 Identities=22% Similarity=0.297 Sum_probs=66.7 Template_Neff=10.100
7580
7581 Q NP_000290.2 287 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ--NGIREAVSLLRR--TGNAEIQKQLTGLLWNLSSTDE 362 (747)
7582 Q Consensus 287 ~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~--~IL~~Ll~lL~s--s~d~eVr~~AL~aLsnLas~~~ 362 (747)
7583 +.++.++.++...++.++..++.++.++..... ...+... +.++.|+.++.. ..++.++..++.+|.+++....
7584 T Consensus 9 ~~i~~lv~lL~~~~~~v~~~a~~~L~~l~~~~~--~~~l~~~~~~~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~~~ 86 (369)
7585 T 6HB2_D 9 SQLNELVEFLHSPQPAVRQIAIDNLVGFSAGPT--SKVFKNDSYRPIKDIIKMIMDPEHGTRVIIQQGVTILVNLSEDKL 86 (369)
7586 T ss_dssp HHHHHHHGGGGCSCHHHHHHHHHHHGGGGSSGG--GGGGGHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHTTSHH
7587 T ss_pred hhHHHHHHHhcCCCHHHHHHHHHHHhHhcCCCC--chhhhcCCchHHHHHHHHHhCcccCcHHHHHHHHHHHHHHhCCHH
7588 Confidence 456677777777777888899999988876543 2333333 478888888852 1356788899999999987655
7589
7590
7591 Q NP_000290.2 363 LKEELI--A-DALPVLADRVII 381 (747)
7592 Q Consensus 363 ~~~~Lv--e-giLe~Lv~LL~~ 381 (747)
7593 ....+. + ++++.|+.++..
7594 T Consensus 87 ~~~~l~~~~~g~i~~L~~ll~~ 108 (369)
7595 T 6HB2_D 87 VRNIILSDDKKFLKFLVWKIVD 108 (369)
7596 T ss_dssp HHHCCCCCCTHHHHHHHHHHSC
7597 T ss_pred HHHHHhhcChHHHHHHHHHHHc
7598 Confidence 556666 5 888888888874
7599
7600
7601 No 155
7602 >2W3C_A GENERAL VESICULAR TRANSPORT FACTOR P115; MEMBRANE VESICLE TETHERING, ARMADILLO FOLD; HET: PEG; 2.22A {HOMO SAPIENS}
7603 Probab=96.59 E-value=5.7e-06 Score=90.00 Aligned_cols=135 Identities=13% Similarity=0.124 Sum_probs=95.4 Template_Neff=10.400
7604
7605 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDE-SAKQQVY-QLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
7606 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~-~~~~~li-~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
7607 .++.++.++.+.+..++..++.+|..++...+ .....+. ..+.++.++.++.+.+..++..++.+|..++........
7608 T Consensus 71 ~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~ 150 (577)
7609 T 2W3C_A 71 NVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQK 150 (577)
7610 T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHH
7611 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHHHhchHHHHHHHHhCCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHH
7612 Confidence 45566666766778889999999999987543 2222333 246788888888877788899999999999875444444
7613
7614
7615 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGN----AEIQKQLTGLLWNLSSTDELKEEL-IA-DALPVLADRVII 381 (747)
7616 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d----~eVr~~AL~aLsnLas~~~~~~~L-ve-giLe~Lv~LL~~ 381 (747)
7617 .+...+.++.|+.++. ... ..++..++.+|.+++........+ .+ ++++.|+.+|..
7618 T Consensus 151 ~~~~~g~~~~L~~ll~-~~~~~~~~~v~~~al~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~ 213 (577)
7619 T 2W3C_A 151 IVAFENAFERLLDIIS-EEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEV 213 (577)
7620 T ss_dssp HHHHTTHHHHHHHHHH-HTTGGGSCHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGSGGGCC
7621 T ss_pred HHHcCCHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHccCHHHHHHHHhcChHHHHHHHHhc
7622 Confidence 4444678888888886 322 257788899999998765433333 34 788889888875
7623
7624
7625 No 156
7626 >4XZR_B Heh1-NLS, Kap60; karyopherins nuclear import ; 2.25A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
7627 Probab=96.58 E-value=5.2e-06 Score=81.38 Aligned_cols=114 Identities=19% Similarity=0.154 Sum_probs=76.5 Template_Neff=13.200
7628
7629 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7630 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7631 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..++..........
7632 T Consensus 172 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 251 (423)
7633 T 4XZR_B 172 ALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVV 251 (423)
7634 T ss_dssp GHHHHHHHTTCSCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
7635 T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
7636 Confidence 45556666666677788888888888876544333334444567777777777777888889999988876543332223
7637
7638
7639 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
7640 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
7641 ...++++.+...+. ..++.++..++.++..++..
7642 T Consensus 252 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 285 (423)
7643 T 4XZR_B 252 INAGVLPALRLLLS-SPKENIKKEACWTISNITAG 285 (423)
7644 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTS
7645 T ss_pred HHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHhcC
7646 Confidence 33356667777775 45667777888888877764
7647
7648
7649 No 157
7650 >3TT9_A Plakophilin-2; CELL ADHESION; HET: GOL; 1.55A {Homo sapiens}
7651 Probab=96.56 E-value=6e-06 Score=75.59 Aligned_cols=136 Identities=22% Similarity=0.238 Sum_probs=88.7 Template_Neff=12.300
7652
7653 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
7654 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
7655 +++.+..++.+.+..++..++.+|.+++.........+...+.++.++.++. ..+..++..++.++.+++... .....
7656 T Consensus 53 ~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~-~~~~~ 131 (233)
7657 T 3TT9_A 53 GILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSND-KLKNL 131 (233)
7658 T ss_dssp HHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSG-GGHHH
7659 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCcHHHHHHHcccHHHHHHHHhhCCCHHHHHHHHHHHHHHccCH-HHHHH
7660 Confidence 4556666676667788889999999988644444444555577788888887 556778888999999987643 22233
7661
7662
7663 Q NP_000290.2 325 TRRQNGIREAVSLLRRT--------------GNAEIQKQLTGLLWNLSS-TDELKEELIA-DA-LPVLADRVIIP 382 (747)
7664 Q Consensus 325 ll~~~IL~~Ll~lL~ss--------------~d~eVr~~AL~aLsnLas-~~~~~~~Lve-gi-Le~Lv~LL~~~ 382 (747)
7665 +...+++..+..++... .+..++..++.++.+++. .......+.. +. ++.|+.++...
7666 T Consensus 132 ~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 206 (233)
7667 T 3TT9_A 132 MITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGT 206 (233)
7668 T ss_dssp HHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHH
7669 T ss_pred hhhhcHHHHHHHHHhhccCCCCCCCCcccCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcccHHHHHHHHHHcc
7670 Confidence 33334455555554311 135677888899999887 4444444444 55 78888877653
7671
7672
7673 No 158
7674 >6HB3_B Protein HGH1; solenoid protein, Armadillo repeat, CHAPERONE; 3.0A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
7675 Probab=96.56 E-value=6.6e-06 Score=84.61 Aligned_cols=93 Identities=22% Similarity=0.297 Sum_probs=66.7 Template_Neff=10.100
7676
7677 Q NP_000290.2 287 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ--NGIREAVSLLRR--TGNAEIQKQLTGLLWNLSSTDE 362 (747)
7678 Q Consensus 287 ~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~--~IL~~Ll~lL~s--s~d~eVr~~AL~aLsnLas~~~ 362 (747)
7679 +.++.++.++...+..++..++.++.++..... ...+... +.++.|+.++.. ..+..++..++.+|.+++....
7680 T Consensus 9 ~~~~~lv~lL~~~~~~v~~~a~~~L~~l~~~~~--~~~l~~~~~~~i~~Lv~ll~~~~~~~~~~~~~al~~L~~l~~~~~ 86 (369)
7681 T 6HB3_B 9 SQLNELVEFLHSPQPAVRQIAIDNLVGFSAGPT--SKVFKNDSYRPIKDIIKMIMDPEHGTRVIIQQGVTILVNLSEDKL 86 (369)
7682 T ss_pred CcHHHHHHHccCCCHHHHHHHHHHHHHHcCChh--HHHHHHhCCCcHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCHH
7683 Confidence 456677777776677888899999988876543 2333333 478888888852 1356788899999999987655
7684
7685
7686 Q NP_000290.2 363 LKEELI--A-DALPVLADRVII 381 (747)
7687 Q Consensus 363 ~~~~Lv--e-giLe~Lv~LL~~ 381 (747)
7688 ....+. . ++++.|+.+|..
7689 T Consensus 87 ~~~~l~~~~~g~i~~L~~ll~~ 108 (369)
7690 T 6HB3_B 87 VRNIILSDDKKFLKFLVWKIVD 108 (369)
7691 T ss_pred HHHHHHhccCCcHHHHHHHhcC
7692 Confidence 556666 5 888888888874
7693
7694
7695 No 159
7696 >6SA8_A ring-like DARPin-Armadillo fusion H83_D01, LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG; protein fusion, DARPin, Armadillo, shared; 2.4A {synthetic construct}
7697 Probab=96.54 E-value=6.4e-06 Score=88.93 Aligned_cols=322 Identities=20% Similarity=0.248 Sum_probs=204.5 Template_Neff=11.900
7698
7699 Q NP_000290.2 286 LGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELK 364 (747)
7700 Q Consensus 286 ~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~ 364 (747)
7701 ...++.+...+...+..++..++.+|..++.........+...++++.+...+. ..++.++..++.++..++... ...
7702 T Consensus 177 ~~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~ 255 (671)
7703 T 6SA8_A 177 KKILKDLVKKLSSPNENELQNALWTLGNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQI 255 (671)
7704 T ss_dssp HHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTSCHHHH
7705 T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCChHHH
7706 Confidence 355667777777777778888888888887654333333444567777888886 557788999999999988743 222
7707
7708
7709 Q NP_000290.2 365 EELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQT 443 (747)
7710 Q Consensus 365 ~~Lve-giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (747)
7711 ..+.. ++++.|+.++.. .++++-..+..+|..-. .. ....+..
7712 T Consensus 256 ~~~~~~~~~~~l~~~l~~----------------~~~~v~~~a~~~L~~l~---------~~-----------~~~~~~~ 299 (671)
7713 T 6SA8_A 256 QAVIDAGALPALVQLLSS----------------PNEQILQEALWALSNIA---------SG-----------GNEQIQA 299 (671)
7714 T ss_dssp HHHHHTTCHHHHHHHTTC----------------SCHHHHHHHHHHHHHHT---------TS-----------CHHHHHH
7715 T ss_pred HHHHHcCHHHHHHHHhcC----------------CCHHHHHHHHHHHHHHH---------cC-----------CcHHHHH
7716 Confidence 33333 677777777753 13444444444443211 00 0001111
7717
7718
7719 Q NP_000290.2 444 MRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMN 523 (747)
7720 Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (747)
7721 . -..++++.|+..++. .+..-...+...|.++....
7722 T Consensus 300 ~-~~~~~~~~L~~~l~~------~~~~v~~~a~~~L~~l~~~~------------------------------------- 335 (671)
7723 T 6SA8_A 300 V-IDAGALPALVQLLSS------PNEQILQEALWALSNIASGG------------------------------------- 335 (671)
7724 T ss_dssp H-HHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSC-------------------------------------
7725 T ss_pred H-HHhChHHHHHHHhcC------CcHHHHHHHHHHHHHHhcCC-------------------------------------
7726 Confidence 1 113455555544431 11112222333333332110
7727
7728
7729 Q NP_000290.2 524 NNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARL 603 (747)
7730 Q Consensus 524 ~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~L 603 (747)
7731 ......+.+.++++.|+.++. ..++.++..++.+|.+++...+. ....+...++++.|+.+
7732 T Consensus 336 -------------~~~~~~~~~~~~l~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~ 396 (671)
7733 T 6SA8_A 336 -------------NEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNE-----QIQAVIDAGALPALVQL 396 (671)
7734 T ss_dssp -------------HHHHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHG
7735 T ss_pred -------------cHHHHHHHhcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCcH-----HHHHHHHcCcHHHHHHH
7736 Confidence 001112345667888888887 46778888999999999874332 23333456788899999
7737
7738
7739 Q NP_000290.2 604 LQSGNSDVVRSGASLLSNMSRHP-LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFS 681 (747)
7740 Q Consensus 604 L~s~d~eVr~~AL~aLsnLa~~~-e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve 681 (747)
7741 +.+.++.++..++.+|.+++... .. ......++++.|+.++.+ .++.++..++.+|.+++...+.....+.+
7742 T Consensus 397 l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~ 470 (671)
7743 T 6SA8_A 397 LSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSS------PNEQILQEALWALSNIASGGNEQIQAVID 470 (671)
7744 T ss_dssp GGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGC------SCHHHHHHHHHHHHHHHTSCHHHHHHHHH
7745 T ss_pred hcCCCHHHHHHHHHHHHhhcCCCHHHHHHHHhcCcHHHHHHHcCC------CCHHHHHHHHHHHHHHHcCChHHHHHHHh
7746 Confidence 98888899999999999998762 22 233445678888888876 36788999999999999765544455556
7747
7748
7749 Q NP_000290.2 682 SSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
7750 Q Consensus 682 ~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
7751 .++++.|+.++.+. ++.++..++.+|.+++..
7752 T Consensus 471 ~~~~~~l~~~l~~~-~~~v~~~a~~~l~~l~~~ 502 (671)
7753 T 6SA8_A 471 AGALPALVQLLSSP-NEQIQDEAEKTLLNIANG 502 (671)
7754 T ss_dssp TTHHHHHHHHTTCS-CHHHHHHHHHHHHHHHTS
7755 T ss_pred cCcHHHHHHHhhCC-CHHHHHHHHHHHHHHHcC
7756 Confidence 67788888888876 788899999999998854
7757
7758
7759 No 160
7760 >1EE4_A KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
7761 Probab=96.51 E-value=6.8e-06 Score=80.51 Aligned_cols=114 Identities=22% Similarity=0.183 Sum_probs=77.4 Template_Neff=13.200
7762
7763 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7764 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7765 +++.+...+.+.++.++..++.++..+..............++++.+...+.+.++.++..++.++..++...+.....+
7766 T Consensus 214 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 293 (423)
7767 T 1EE4_A 214 IPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAV 293 (423)
7768 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
7769 T ss_pred HHHHHHHHhcCCCcchhHHHHHHHHHHHhCChHHHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHH
7770 Confidence 44556666666677888889999988876543333333334667777777777777888899999988876544333333
7771
7772
7773 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
7774 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
7775 ...++++.+...+. ..++.++..++.++..++..
7776 T Consensus 294 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 327 (423)
7777 T 1EE4_A 294 IDANLIPPLVKLLE-VAEDKTKKEACWAISNASSG 327 (423)
7778 T ss_dssp HHTTCHHHHHHHHH-HSCHHHHHHHHHHHHHHHGG
7779 T ss_pred HHCCcHHHHHHHHh-cCCHHHHHHHHHHHHHHHcC
7780 Confidence 34456677777775 55667788888888887764
7781
7782
7783 No 161
7784 >1EE4_B KARYOPHERIN ALPHA; ARM repeat, TRANSPORT PROTEIN; 2.1A {Saccharomyces cerevisiae} SCOP: a.118.1.1
7785 Probab=96.51 E-value=6.8e-06 Score=80.51 Aligned_cols=114 Identities=22% Similarity=0.183 Sum_probs=77.4 Template_Neff=13.200
7786
7787 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
7788 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
7789 +++.+...+.+.++.++..++.++..+..............++++.+...+.+.++.++..++.++..++...+.....+
7790 T Consensus 214 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 293 (423)
7791 T 1EE4_B 214 IPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAV 293 (423)
7792 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHH
7793 T ss_pred HHHHHHHHhcCCCcchhHHHHHHHHHHHhCChHHHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHH
7794 Confidence 44556666666677888889999988876543333333334667777777777777888899999988876544333333
7795
7796
7797 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
7798 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
7799 ...++++.+...+. ..++.++..++.++..++..
7800 T Consensus 294 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 327 (423)
7801 T 1EE4_B 294 IDANLIPPLVKLLE-VAEDKTKKEACWAISNASSG 327 (423)
7802 T ss_dssp HHTTCHHHHHHHHH-HSCHHHHHHHHHHHHHHHGG
7803 T ss_pred HHCCcHHHHHHHHh-cCCHHHHHHHHHHHHHHHcC
7804 Confidence 34456677777775 55667788888888887764
7805
7806
7807 No 162
7808 >5KC2_B Phosphatidylinositol 3-kinase VPS34 (E.C.2.7.1.137), Serine/threonine-protein; autophagy, phosphatidylinositol 3-kinase (PtdIns3K), endocytosis; 28.0A {Saccharomyces cerevisiae}
7809 Probab=96.45 E-value=9.9e-06 Score=98.55 Aligned_cols=150 Identities=9% Similarity=0.041 Sum_probs=112.4 Template_Neff=9.500
7810
7811 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
7812 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
7813 .++++.|+.+|. +.++.++..|+.+|..++.... ...+.+.. ++.|+.+|.+.++.++..++.+|++|+..
7814 T Consensus 618 ~~~l~~L~~~l~-d~~~~vR~~a~~al~~l~~~~~-------~~~~~~~~-lp~L~~lL~d~~~~vr~~al~aL~~L~~~ 688 (1454)
7815 T 5KC2_B 618 DIILSHLITYLN-DKDPALRVSLIQTISGISILLG-------TVTLEQYI-LPLLIQTITDSEELVVISVLQSLKSLFKT 688 (1454)
7816 T ss_pred hhhHHHHHHHcc-CCCHHHHHHHHHHHHHHHHhhH-------HHHHHHcC-HHHHHHHhcCCCHHHHHHHHHHHHHHhhC
7817 Confidence 346788889998 5888999999999999986431 22223333 89999999988889999999999999876
7818
7819
7820 Q NP_000290.2 626 P-LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
7821 Q Consensus 626 ~-e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
7822 . .....+.. +++.+..++.+ .++.++..++.+|..|+..... .... ..+++.|+.+|.+. +..+++.|
7823 T Consensus 689 ~~~~~~~~~~-~l~~l~~~l~~------~~~~vr~~a~~~L~~l~~~~~~--~~~~-~~~~~~L~~~L~d~-~~~vr~~a 757 (1454)
7824 T 5KC2_B 689 GLIRKKYYID-ISKTTSPLLLH------PNNWIRQFTLMIIIEIINKLSK--AEVY-CILYPIIRPFFEFD-VEFNFKSM 757 (1454)
7825 T ss_pred CHHHHHHHHH-HHHHHHHHHCC------CCHHHHHHHHHHHHHHhcCCCC--HHHH-cChHHHHHHHhcCC-CHHHHHHH
7826 Confidence 3 22222222 66777777766 3788999999999999875321 1122 45788899999877 88999999
7827
7828
7829 Q NP_000290.2 705 RLLLSDMWSSK 715 (747)
7830 Q Consensus 705 L~aLsnL~~~~ 715 (747)
7831 +.+|..++..+
7832 T Consensus 758 ~~~L~~~~~~~ 768 (1454)
7833 T 5KC2_B 758 ISCCKQPVSRS 768 (1454)
7834 T ss_pred HHHHHHHhhcc
7835 Confidence 99999988765
7836
7837
7838 No 163
7839 >4B18_A IMPORTIN SUBUNIT ALPHA-1, TELOMERASE REVERSE; TRANSPORT PROTEIN - PEPTIDE COMPLEX; 2.52A {HOMO SAPIENS}
7840 Probab=96.44 E-value=8.9e-06 Score=80.74 Aligned_cols=366 Identities=18% Similarity=0.167 Sum_probs=217.7 Template_Neff=13.000
7841
7842 Q NP_000290.2 245 LTIPKAVQYLSS-QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
7843 Q Consensus 245 ~iL~~Ll~lL~s-sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
7844 .+++.+...+.. .++.++..++.++..++.........+...++++.+...+.+.+..++..++.++..++........
7845 T Consensus 61 ~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~ 140 (447)
7846 T 4B18_A 61 GVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRD 140 (447)
7847 T ss_dssp THHHHHHHHTTCTTCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
7848 T ss_pred cHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCcHHHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHHccChhHHH
7849 Confidence 345556666655 5677888889999888765433333333456777888888777788889999999988765443333
7850
7851
7852 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVIIPFSGWCDGNSNMSREVVDPE 401 (747)
7853 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~ 401 (747)
7854 .+...++++.+...+....++.++..++.++..++........... ++++.+..++.. .+++
7855 T Consensus 141 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~ 204 (447)
7856 T 4B18_A 141 YVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFV----------------SDTD 204 (447)
7857 T ss_dssp HHHHTTCHHHHHHGGGCTTCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTS----------------CCHH
7858 T ss_pred HHHHCCcHHHHHHHhhcCCChhHHHHHHHHHHHHhcCCCCCCcccccccHHHHHHHHhhC----------------CCHH
7859 Confidence 3334456777777775333457888888999888765432222211 455556655532 1334
7860
7861
7862 Q NP_000290.2 402 VFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHN 481 (747)
7863 Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (747)
7864 +...+..++..-... -+ ...+.+. -.+++..|...+.. .+..-.+.+...|.+
7865 T Consensus 205 ~~~~a~~~l~~l~~~------~~--------------~~~~~~~-~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~ 257 (447)
7866 T 4B18_A 205 VLADACWALSYLSDG------PN--------------DKIQAVI-DAGVCRRLVELLMH------NDYKVVSPALRAVGN 257 (447)
7867 T ss_dssp HHHHHHHHHHHHTSS------SH--------------HHHHHHH-HTTCHHHHHHHTTC------SCHHHHHHHHHHHHH
7868 T ss_pred HHHHHHHHHHHHhcC------CH--------------HHHHHHH-HCCHHHHHHHHHcC------CCHHHHHHHHHHHHH
7869 Confidence 444444333221100 00 0000000 12333333333321 111112222222322
7870
7871
7872 Q NP_000290.2 482 LSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKK 561 (747)
7873 Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d 561 (747)
7874 +.... ......+.+.++++.|+.++. +.+
7875 T Consensus 258 l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~ 286 (447)
7876 T 4B18_A 258 IVTGD--------------------------------------------------DIQTQVILNCSALQSLLHLLS-SPK 286 (447)
7877 T ss_dssp HTTSC--------------------------------------------------HHHHHHHHHTTHHHHHHHHTT-CSS
7878 T ss_pred HhcCC--------------------------------------------------hHHHHHHhhcchHHHHHHHhc-CCC
7879 Confidence 22110 000112234567888888887 467
7880
7881
7882 Q NP_000290.2 562 DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGNQVFP 638 (747)
7883 Q Consensus 562 ~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~giI~ 638 (747)
7884 +.++..++.+|.+++..... ....+...++++.+..++.+.++.++..++.+|.+++.. ... ..+...++++
7885 T Consensus 287 ~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~ 361 (447)
7886 T 4B18_A 287 ESIKKEACWTISNITAGNRA-----QIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIK 361 (447)
7887 T ss_dssp HHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHH
7888 T ss_pred HHHHHHHHHHHHHHhcCCHH-----HHHHHHhCChHHHHHHHHhcCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCcHH
7889 Confidence 78888999999999875332 223334567888899998888888999999999999875 222 2334446778
7890
7891
7892 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK-----------QYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
7893 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~-----------~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
7894 .+..++.+ .++.++..++.+|.+++...+.... .+.+.++++.+..++.+. ++.++..++.+
7895 T Consensus 362 ~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~~v~~~a~~~ 434 (447)
7896 T 4B18_A 362 PLCDLLTV------MDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSHE-NQEIYQKAFDL 434 (447)
7897 T ss_dssp HHHHGGGS------SCHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCHHHHHHHHTTHHHHHHHGGGSS-CHHHHHHHHHH
7898 T ss_pred HHHHHhhC------CCHHHHHHHHHHHHHHHHHhHHHHhhCCCCCCHHHHHHHHhccHHHHHHHHhCC-CHHHHHHHHHH
7899 Confidence 88888776 3678889999999999875332221 233445677777777666 77889999999
7900
7901
7902 Q NP_000290.2 708 LSDMWSSKE 716 (747)
7903 Q Consensus 708 LsnL~~~~~ 716 (747)
7904 +.++....+
7905 T Consensus 435 l~~l~~~~~ 443 (447)
7906 T 4B18_A 435 IEHYFGTED 443 (447)
7907 T ss_dssp HHHHCC---
7908 T ss_pred HHHHhcCcc
7909 Confidence 988876543
7910
7911
7912 No 164
7913 >1JDH_A BETA-CATENIN, hTcf-4; BETA-CATENIN, TCF4, PROTEIN-PROTEIN COMPLEX, TRANSCRIPTION; 1.9A {Homo sapiens} SCOP: a.118.1.1
7914 Probab=96.44 E-value=9e-06 Score=82.47 Aligned_cols=363 Identities=19% Similarity=0.190 Sum_probs=216.7 Template_Neff=13.100
7915
7916 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
7917 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
7918 .+++.+...+.+.++.++..++.++..+....+.....+...++++.+...+... +..++..++.++..+..... ...
7919 T Consensus 143 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~-~~~ 221 (529)
7920 T 1JDH_A 143 GGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS-NKP 221 (529)
7921 T ss_dssp THHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTT-HHH
7922 T ss_pred ChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCChhHHHHHHHccCCcHHHHHHHHHHHHHHhcCCc-cHH
7923 Confidence 3455666667667788888999999988754444333444455777777777654 56778888888888875432 222
7924
7925
7926 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
7927 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
7928 .+...++++.+...+. ..++.++..++.++..++....... ...++++.+..++.. -++++.
7929 T Consensus 222 ~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~-~~~~~~~~l~~~l~~----------------~~~~~~ 283 (529)
7930 T 1JDH_A 222 AIVEAGGMQALGLHLT-DPSQRLVQNCLWTLRNLSDAATKQE-GMEGLLGTLVQLLGS----------------DDINVV 283 (529)
7931 T ss_dssp HHHHTTHHHHHHTTTT-SSCHHHHHHHHHHHHHHHTTCTTCS-CCHHHHHHHHHHTTC----------------SCHHHH
7932 T ss_pred HHHHCCHHHHHHHHcc-CCCHHHHHHHHHHHHHHcchhhhHH-HHchHHHHHHHHhCC----------------CCHHHH
7933 Confidence 3333456777777776 4566788888888888876432211 112455556655541 123333
7934
7935
7936 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
7937 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
7938 ..+..++..-... .+. .+..+ .-.+.++.++..+.. ..-+..-.+.+...|.++.
7939 T Consensus 284 ~~a~~~l~~l~~~------~~~--------------~~~~~-~~~~~~~~l~~~l~~----~~~~~~~~~~a~~~l~~l~ 338 (529)
7940 T 1JDH_A 284 TCAAGILSNLTCN------NYK--------------NKMMV-CQVGGIEALVRTVLR----AGDREDITEPAICALRHLT 338 (529)
7941 T ss_dssp HHHHHHHHHHTTT------CHH--------------HHHHH-HHTTHHHHHHHHHHH----HTTCHHHHHHHHHHHHHHT
7942 T ss_pred HHHHHHHHHHhcC------CHH--------------HHHHH-HHcCHHHHHHHHHHh----cCCChHhHHHHHHHHHHHh
7943 Confidence 3333333221100 000 00000 012233333332211 0111222333444444443
7944
7945
7946 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
7947 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
7948 ....... .....+...++++.++.++....++.
7949 T Consensus 339 ~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~l~~~l~~~~~~~ 371 (529)
7950 T 1JDH_A 339 SRHQEAE-----------------------------------------------MAQNAVRLHYGLPVVVKLLHPPSHWP 371 (529)
7951 T ss_dssp SSSTTHH-----------------------------------------------HHHHHHHHTTCHHHHHHTTSTTCCHH
7952 T ss_pred cCcccHH-----------------------------------------------HHHHHHHhcccHHHHHHHHCCCCCHH
7953 Confidence 2211000 00111234566778888887323667
7954
7955
7956 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN----------------------SDVVRSGASLLSN 621 (747)
7957 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d----------------------~eVr~~AL~aLsn 621 (747)
7958 ++..++.+|.+++.... ....+...++++.|..++.+.+ +.++..++.+|.+
7959 T Consensus 372 ~~~~a~~~l~~l~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~ 445 (529)
7960 T 1JDH_A 372 LIKATVGLIRNLALCPA------NHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHI 445 (529)
7961 T ss_dssp HHHHHHHHHHHHTTSGG------GHHHHHHTTHHHHHHHHHHHHHHHHC-----------CBTTBCHHHHHHHHHHHHHH
7962 T ss_pred HHHHHHHHHHHHhcChh------hhHHHHhcCHHHHHHHHHHhcChhHHHHHhccCcchhHhccCCHHHHHHHHHHHHHH
7963 Confidence 88889999999887532 1333345678888888887654 6788889999999
7964
7965
7966 Q NP_000290.2 622 MSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
7967 Q Consensus 622 La~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
7968 ++..... ..+...++++.+..++.+ .++.++..++.+|.+++.. +.....+...++++.|..++.+. ++.+
7969 T Consensus 446 l~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~v 517 (529)
7970 T 1JDH_A 446 LARDVHNRIVIRGLNTIPLFVQLLYS------PIENIQRVAAGVLCELAQD-KEAAEAIEAEGATAPLTELLHSR-NEGV 517 (529)
7971 T ss_dssp HTTSHHHHHHHHHTTCHHHHHHGGGC------SCHHHHHHHHHHHHHHTTS-HHHHHHHHHTTCHHHHHHGGGCS-SHHH
7972 T ss_pred HhcCccchHHHHhcCcHHHHHHHhcC------CCHHHHHHHHHHHHHHhcC-HHHHHHHHHcCcHHHHHHHHhcC-CHHH
7973 Confidence 9876433 233445677888888876 3678899999999999875 44455555667888899988876 7889
7974
7975
7976 Q NP_000290.2 701 AEAARLLLSDMW 712 (747)
7977 Q Consensus 701 r~aAL~aLsnL~ 712 (747)
7978 +..++.+|.+++
7979 T Consensus 518 ~~~a~~~L~~l~ 529 (529)
7980 T 1JDH_A 518 ATYAAAVLFRMS 529 (529)
7981 T ss_dssp HHHHHHHHHHHC
7982 T ss_pred HHHHHHHHHhcC
7983 Confidence 999999888763
7984
7985
7986 No 165
7987 >5MFI_B YIII(Dq.V2)4CqI, (KR)4; Designed armadillo repeat protein, peptide; 1.45A {synthetic construct}
7988 Probab=96.43 E-value=9.2e-06 Score=73.31 Aligned_cols=135 Identities=19% Similarity=0.216 Sum_probs=90.0 Template_Neff=13.000
7989
7990 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
7991 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
7992 .+++.+...+.+.+..++..++.++.++....+.....+...++++.+...+.+.+..++..++.++..++.........
7993 T Consensus 88 ~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 167 (243)
7994 T 5MFI_B 88 GALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQK 167 (243)
7995 T ss_dssp TCHHHHHHHTSSSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHTTTSSCHHHHHHHHHHHHHHHTSCHHHHHH
7996 T ss_pred CcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHH
7997 Confidence 34555666666667778888999999887644443334444567777888887777788888999998888644433333
7998
7999
8000 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
8001 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
8002 ....++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
8003 T Consensus 168 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 224 (243)
8004 T 5MFI_B 168 LIEAGALSPLVKLLD-DASEEVIQEAVWAIANIASGNNEQIQKLEEAGAEPALEKLQS 224 (243)
8005 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGG
8006 T ss_pred HHHCCcHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhc
8007 Confidence 334456777777776 5567888889999999886332 2222333 56666666654
8008
8009
8010 No 166
8011 >5MFJ_B YIII(Dq.V2)4CqI, (KR)5; Designed armadillo repeat protein, peptide; 1.53A {synthetic construct}
8012 Probab=96.43 E-value=9.2e-06 Score=73.31 Aligned_cols=135 Identities=19% Similarity=0.216 Sum_probs=90.0 Template_Neff=13.000
8013
8014 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
8015 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
8016 .+++.+...+.+.+..++..++.++.++....+.....+...++++.+...+.+.+..++..++.++..++.........
8017 T Consensus 88 ~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 167 (243)
8018 T 5MFJ_B 88 GALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQK 167 (243)
8019 T ss_dssp TCHHHHHHHHHHSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHTTTSSCHHHHHHHHHHHHHHHTSCHHHHHH
8020 T ss_pred CcHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHH
8021 Confidence 34555666666667778888999999887644443334444567777888887777788888999998888644433333
8022
8023
8024 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
8025 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
8026 ....++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
8027 T Consensus 168 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 224 (243)
8028 T 5MFJ_B 168 LIEAGALSPLVKLLD-DASEEVIQEAVWAIANIASGNNEQIQKLEEAGAEPALEKLQS 224 (243)
8029 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHTSS
8030 T ss_pred HHHCCcHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHhc
8031 Confidence 334456777777776 5567888889999999886332 2222333 56666666654
8032
8033
8034 No 167
8035 >4MFU_A Beta-catenin-like protein 1; ARM repeats, GENE REGULATION; 2.744A {Homo sapiens}
8036 Probab=96.43 E-value=1.1e-05 Score=87.33 Aligned_cols=182 Identities=12% Similarity=0.061 Sum_probs=127.6 Template_Neff=8.700
8037
8038 Q NP_000290.2 539 GSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLM----SSGMSQLIGLKEKGLPQIARLLQS------GN 608 (747)
8039 Q Consensus 539 ~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~----s~~~~~~llie~giI~~Ll~LL~s------~d 608 (747)
8040 ....+++.|+++.|+.+|. +++..+...++.+|.+++...... ........+.+.++++.|+.+|.. .+
8041 T Consensus 60 ~~~~lv~~g~i~~Lv~LL~-~~n~~i~~~a~~~L~~Lt~~~~~~~~~~~~~~~~~~l~~~g~l~~Lv~~L~~~~e~~~~d 138 (490)
8042 T 4MFU_A 60 LYHLLVELNAVQSLLGLLG-HDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEE 138 (490)
8043 T ss_dssp CTHHHHHTTHHHHHHHHTS-CSSHHHHHHHHHHHHHHHHGGGSSCCCHHHHHHHHHHHHTTHHHHHHHHHHHCCTTCHHH
8044 T ss_pred HHHHHHHCChHHHHHHHhC-CCCHHHHHHHHHHHHHHcCcccccCChhhHHHHHHHHHhCCHHHHHHHHHHhccccccch
8045 Confidence 3455678899999999998 466778888999999998643200 000013344577889999998875 55
8046
8047
8048 Q NP_000290.2 609 SDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLN 686 (747)
8049 Q Consensus 609 ~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~ 686 (747)
8050 ...+..++.+|.+|+.. +.. ..+...++++.|+.++.... ....++..++.+|.+|+..++..+..+.+.++++
8051 T Consensus 139 ~~~~~~al~~L~nL~~~~~~~~~~i~~~~~l~~Ll~~L~~~~----~~~~~k~~a~~~L~~L~~~~~~~~~~l~~~g~i~ 214 (490)
8052 T 4MFU_A 139 ADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKRLKAKM----PFDANKLYCSEVLAILLQDNDENRELLGELDGID 214 (490)
8053 T ss_dssp HHHHHHHHHHHHHHHHHSTTHHHHHCCCCCHHHHHHHHHCCS----CCCHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHH
8054 T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHCCHHHHHHHHHHcCC----CCHHHHHHHHHHHHHHHcCCHHHHHHHHhCchHH
8055 Confidence 67888999999999976 333 33445678888988887620 1367788999999999986566667777778899
8056
8057
8058 Q NP_000290.2 687 NIINLCRS-----SA---SPKAAEAARLLLSDMWSSKELQGVLRQQG 725 (747)
8059 Q Consensus 687 ~Ll~LL~s-----~~---d~eVr~aAL~aLsnL~~~~~~~~~~~~~~ 725 (747)
8060 .|+.++.. +. .......++.+|.+++...+.+..+.+.|
8061 T Consensus 215 ~Ll~lL~~~~~~d~~~~~~~e~~en~~~aL~~L~~~~~~~~~f~~~~ 261 (490)
8062 T 4MFU_A 215 VLLQQLSVFKRHNPSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGE 261 (490)
8063 T ss_dssp HHHHHHHTTSSSCCSSHHHHHHHHHHHHHHHHHHHSTHHHHHHHHTT
8064 T ss_pred HHHHHHHhhhhcCCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHCC
8065 Confidence 99998851 11 12344556889999887776655554443
8066
8067
8068 No 168
8069 >5AEI_B DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII; DE NOVO PROTEIN, PROTEIN-PEPTIDE COMPLEX; HET: CA, ACT; 1.83A {SYNTHETIC CONSTRUCT}
8070 Probab=96.41 E-value=1e-05 Score=74.57 Aligned_cols=134 Identities=26% Similarity=0.306 Sum_probs=85.5 Template_Neff=13.200
8071
8072 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8073 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8074 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..++..........
8075 T Consensus 89 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 168 (286)
8076 T 5AEI_B 89 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 168 (286)
8077 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
8078 T ss_pred hHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCChHHHHHH
8079 Confidence 44556666666677788888999888876533333333344567777777777777888889999988876543333333
8080
8081
8082 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
8083 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
8084 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
8085 T Consensus 169 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 224 (286)
8086 T 5AEI_B 169 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 224 (286)
8087 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
8088 T ss_pred HHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHcc
8089 Confidence 33456677777775 4566778888888888876422 2222222 45565655554
8090
8091
8092 No 169
8093 >4PLS_B Arm00010; PEPTIDE BINDING PROTEIN, designed armadillo; HET: CA; 2.35A {synthetic construct}
8094 Probab=96.39 E-value=1.1e-05 Score=74.12 Aligned_cols=111 Identities=25% Similarity=0.289 Sum_probs=73.2 Template_Neff=13.200
8095
8096 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8097 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8098 +++.+...+.+.++.++..++.++..++...+.....+...++++.+...+.+.++.++..++.++..++...+.....+
8099 T Consensus 170 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 249 (281)
8100 T 4PLS_B 170 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQKQAV 249 (281)
8101 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
8102 T ss_pred hHHHHHHHhcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHccCCCHHHHHHHHHHHHHHHcCChhHHHHH
8103 Confidence 45556666666677888889999988876544333333444577777787877777888899999998885544333333
8104
8105
8106 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNL 357 (747)
8107 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnL 357 (747)
8108 ...++++.+...+. ..++.++..++.++..+
8109 T Consensus 250 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l 280 (281)
8110 T 4PLS_B 250 KEAGAEPALEQLQS-SPNEKIQKEAQEALEKI 280 (281)
8111 T ss_dssp HTTTHHHHHHTTTS-CSCHHHHHHHHHHHHHC
8112 T ss_pred HHCChHHHHHHHhc-CCCHHHHHHHHHHHHhh
8113 Confidence 33356666666665 45666777777666554
8114
8115
8116 No 170
8117 >4HM9_A Beta-catenin-like protein 1; all alpha-helical, armadillo repeats, PROTEIN; 3.1001A {Homo sapiens}
8118 Probab=96.38 E-value=1.4e-05 Score=88.57 Aligned_cols=181 Identities=12% Similarity=0.075 Sum_probs=128.1 Template_Neff=8.100
8119
8120 Q NP_000290.2 539 GSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSS---G--MSQLIGLKEKGLPQIARLLQS------G 607 (747)
8121 Q Consensus 539 ~~~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~---~--~~~~llie~giI~~Ll~LL~s------~ 607 (747)
8122 ....+++.|+++.|+.+|. +.+..++..++.+|.+|+..... .. . .....+.+.++++.|+.+|.. .
8123 T Consensus 138 ~~~~lv~~g~i~~Lv~LL~-~~n~di~~~a~~~L~~Lt~~~~~-~~~~~~~~~l~~~l~e~g~l~~Lv~~L~~l~e~~~~ 215 (568)
8124 T 4HM9_A 138 LYHLLVELNAVQSLLGLLG-HDNTDVSIAVVDLLQELTDIDTL-HESEEGAEVLIDALVDGQVVALLVQNLERLDESVKE 215 (568)
8125 T ss_dssp GHHHHHHTTHHHHHHHGGG-CSSHHHHHHHHHHHHHHTCHHHH-TTCHHHHHHHHHHHHHTTHHHHHHHHHTTCCTTSHH
8126 T ss_pred HHHHHHHCChHHHHHHHhC-CCCHHHHHHHHHHHHHHhCCccc-cCChhhHHHHHHHHHhCCHHHHHHHHHhcccccccc
8127 Confidence 4455678899999999998 46678888999999999864320 00 0 013344567889999998876 5
8128
8129
8130 Q NP_000290.2 608 NSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSML 685 (747)
8131 Q Consensus 608 d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL 685 (747)
8132 +...+..++.+|.+|+.. +.. ..+...++++.|+.++.... .....+..|+.+|.+|+..++..+..+.+.+++
8133 T Consensus 216 d~~~~~~al~iL~nL~~~~~~~~~~i~~~g~l~~Ll~lL~~~~----~~~~~k~~AaeiL~~L~~~~~~~r~~l~~~g~I 291 (568)
8134 T 4HM9_A 216 EADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKRLKAKM----PFDANKLYCSEVLAILLQDNDENRELLGELDGI 291 (568)
8135 T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHCCCCCHHHHHHHHHSSC----CCCHHHHHHHHHHHHHHTTCHHHHHHHHHTTHH
8136 T ss_pred hHHHHHHHHHHHHHHhccCHHHHHHHHHCCHHHHHHHHHHcCC----CCHHHHHHHHHHHHHHHcCCHHHHHHHHhCchH
8137 Confidence 567888999999999975 333 23445678888998887520 145678889999999998656677777778889
8138
8139
8140 Q NP_000290.2 686 NNIINLCRS-----SA---SPKAAEAARLLLSDMWSSKELQGVLRQQG 725 (747)
8141 Q Consensus 686 ~~Ll~LL~s-----~~---d~eVr~aAL~aLsnL~~~~~~~~~~~~~~ 725 (747)
8142 +.|+.++.. .. .....+.++.+|..++...+.+..+...|
8143 T Consensus 292 ~~LL~lL~~y~~~d~~~~~e~e~~en~~~aL~~L~~~~~~r~~f~~~~ 339 (568)
8144 T 4HM9_A 292 DVLLQQLSVFKRHNPSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGE 339 (568)
8145 T ss_dssp HHHHHHHGGGTTSCCSSSHHHHHHHHHHHHHHHHTTSTHHHHHHHHTT
8146 T ss_pred HHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHCC
8147 Confidence 999998851 11 12345566889999888776655444443
8148
8149
8150 No 171
8151 >3L6X_A Catenin delta-1, E-cadherin; p120, catenin, cadherin, E-cadherin, armadillo; HET: SO4; 2.4A {Homo sapiens}
8152 Probab=96.36 E-value=1.3e-05 Score=86.31 Aligned_cols=135 Identities=19% Similarity=0.251 Sum_probs=86.7 Template_Neff=11.000
8153
8154 Q NP_000290.2 246 TIPKAVQYLSS------QDEKYQAIGAYYIQHTCFQDE-------------------------SAKQQVYQLGGICKLVD 294 (747)
8155 Q Consensus 246 iL~~Ll~lL~s------sd~eVr~sAL~aLsnLs~~~~-------------------------~~~~~li~~~IL~~Ll~ 294 (747)
8156 +++.++.++.. .+..++..++.+|.+++.... .....+...++++.+..
8157 T Consensus 236 ~v~~L~~~l~~~~~~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~ 315 (584)
8158 T 3L6X_A 236 LVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGTSPARGYELLFQPEVVRIYIS 315 (584)
8159 T ss_dssp HHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHTTHHHHSTTCCC--------------CCCCGGGGGGSHHHHHHHHH
8160 T ss_pred HHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHhhhhccChhHHHHHHhcCcCCCCCCCCChhhhhHhhChhHHHHHHH
8161 Confidence 34555565553 356677888888888875421 11223334567777777
8162
8163
8164 Q NP_000290.2 295 LLRSP-NQNVQQAAAGALRNLVFRS----TTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA 369 (747)
8165 Q Consensus 295 lL~s~-d~eVr~~AL~aLs~La~~~----~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve 369 (747)
8166 ++... ++.++..++.+|.+++... ......+...++++.+..++. ..+..++..++.+|.+++........+..
8167 T Consensus 316 ll~~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~~~~~~~~l~~L~~ll~-~~~~~v~~~a~~~L~~L~~~~~~~~~l~~ 394 (584)
8168 T 3L6X_A 316 LLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLT-NEHERVVKAASGALRNLAVDARNKELIGK 394 (584)
8169 T ss_dssp HHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGG-CSCHHHHHHHHHHHHHHHTTCSCHHHHHH
8170 T ss_pred HHHcCCCHHHHHHHHHHHHHHhCCCccCCHHHHHHHHHcChHHHHHHHhc-CCCHHHHHHHHHHHHHHhcChHHHHHHHc
8171 Confidence 77765 7788889999999987642 222233334467778888886 56678888999999999876444333333
8172
8173
8174 Q NP_000290.2 370 DALPVLADRVII 381 (747)
8175 Q Consensus 370 giLe~Lv~LL~~ 381 (747)
8176 ++++.|+.+|..
8177 T Consensus 395 ~~l~~L~~~L~~ 406 (584)
8178 T 3L6X_A 395 HAIPNLVKNLPG 406 (584)
8179 T ss_dssp HHHHHHHHTSSS
8180 T ss_pred chHHHHHHcCCC
8181 Confidence 566666666643
8182
8183
8184 No 172
8185 >4U5L_A deltaIBB-importin-alpha1; TPX2, inhibitor, TRANSPORT PROTEIN; HET: 3D6; 2.53A {Mus musculus}
8186 Probab=96.35 E-value=1.2e-05 Score=78.71 Aligned_cols=134 Identities=17% Similarity=0.197 Sum_probs=87.3 Template_Neff=13.200
8187
8188 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8189 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8190 +++.+...+.+.++.++..++.++..++...+.....+...++++.+..++.+.++.++..++.++..++...+.....+
8191 T Consensus 223 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 302 (426)
8192 T 4U5L_A 223 VVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQV 302 (426)
8193 T ss_dssp CHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
8194 T ss_pred hHHHHHHHhcCCCccHHHHHHHHHHHHhcCCHHHHHHHhccchHHHHHHHhcCCChHHHHHHHHHHHHHhcCCHHHHHHH
8195 Confidence 45566666666777888889999998886544333344445677778888877778888899999998886544333333
8196
8197
8198 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD--ELKEELIA-DALPVLADRVI 380 (747)
8199 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~--~~~~~Lve-giLe~Lv~LL~ 380 (747)
8200 ...++++.+...+. ..++.++..++.++..++... .....+.. ++++.|..++.
8201 T Consensus 303 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 359 (426)
8202 T 4U5L_A 303 VNHGLVPFLVGVLS-KADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLS 359 (426)
8203 T ss_dssp HHTTCHHHHHHHHH-SSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGG
8204 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCCHHHHHHHHhCCcHHHHHHHhc
8205 Confidence 33456777777776 456677888888888887631 11122222 45555555544
8206
8207
8208 No 173
8209 >2JDQ_A IMPORTIN ALPHA-1 SUBUNIT, POLYMERASE BASIC; TRANSPORT, PB2 SUBUNIT, NUCLEAR PROTEIN; 2.2A {HOMO SAPIENS}
8210 Probab=96.34 E-value=1.3e-05 Score=79.63 Aligned_cols=366 Identities=18% Similarity=0.167 Sum_probs=218.3 Template_Neff=13.000
8211
8212 Q NP_000290.2 245 LTIPKAVQYLSS-QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
8213 Q Consensus 245 ~iL~~Ll~lL~s-sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
8214 .+++.+...+.. .++.++..++.++..++.........+...++++.+...+.+.+..++..++.++..++........
8215 T Consensus 64 ~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~ 143 (450)
8216 T 2JDQ_A 64 GVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRD 143 (450)
8217 T ss_dssp THHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHH
8218 T ss_pred chHHHHHHHHccCCCHHHHHHHHHHHHHHhCCCcHHHHHHHHcChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCChHHHH
8219 Confidence 345556666655 5677888888888888765443333333456777888888777788899999999988765443333
8220
8221
8222 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVIIPFSGWCDGNSNMSREVVDPE 401 (747)
8223 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~Lve--giLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~ 401 (747)
8224 .+...++++.+...+....++.++..++.++..++........... ++++.+..++.. .+++
8225 T Consensus 144 ~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----------------~~~~ 207 (450)
8226 T 2JDQ_A 144 YVLDCNILPPLLQLFSKQNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFV----------------SDTD 207 (450)
8227 T ss_dssp HHHHTTCHHHHHHHTTSCCCHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTTC----------------CCHH
8228 T ss_pred HHHHCCCHHHHHHHHhhccchhHHHHHHHHHHHHhcCCCCCchhhhhhhHHHHHHHHhcC----------------CCHH
8229 Confidence 3334566777777776333457888888999888765432222221 455556655543 1334
8230
8231
8232 Q NP_000290.2 402 VFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHN 481 (747)
8233 Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (747)
8234 +...+..+|..-... .+ ...+.. -..+++..|...+++ -+..-.+.++..|.+
8235 T Consensus 208 ~~~~a~~~l~~l~~~------~~--------------~~~~~~-~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~ 260 (450)
8236 T 2JDQ_A 208 VLADACWALSYLSDG------PN--------------DKIQAV-IDAGVCRRLVELLMH------NDYKVVSPALRAVGN 260 (450)
8237 T ss_dssp HHHHHHHHHHHHTSS------SH--------------HHHHHH-HHTTTHHHHHHHTTC------SCHHHHHHHHHHHHH
8238 T ss_pred HHHHHHHHHHHHhcC------CH--------------HHHHHH-HHCCHHHHHHHHHcC------CCHHHHHHHHHHHHH
8239 Confidence 444444333221000 00 000000 012344444433321 011111222222222
8240
8241
8242 Q NP_000290.2 482 LSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKK 561 (747)
8243 Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d 561 (747)
8244 +...- ......+.+.++++.++.++. +.+
8245 T Consensus 261 l~~~~--------------------------------------------------~~~~~~~~~~~~~~~l~~~l~-~~~ 289 (450)
8246 T 2JDQ_A 261 IVTGD--------------------------------------------------DIQTQVILNCSALQSLLHLLS-SPK 289 (450)
8247 T ss_dssp HTTSC--------------------------------------------------HHHHHHHHTTTHHHHHHHHTT-CSS
8248 T ss_pred HhhCC--------------------------------------------------hHHHHHHhhcchHHHHHHHhc-CCC
8249 Confidence 22100 000112234567888888887 467
8250
8251
8252 Q NP_000290.2 562 DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLL-HRVMGNQVFP 638 (747)
8253 Q Consensus 562 ~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~--~e~-~~ll~~giI~ 638 (747)
8254 +.++..++.+|.+++..... ....+...++++.|..++.+.++.++..++.+|.+++.. +.. ..+...++++
8255 T Consensus 290 ~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~ 364 (450)
8256 T 2JDQ_A 290 ESIKKEACWTISNITAGNRA-----QIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIK 364 (450)
8257 T ss_dssp HHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHH
8258 T ss_pred HHHHHHHHHHHHHHhcCCHH-----HHHHHHhCCHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHCCcHH
8259 Confidence 78888999999999875332 223334567888899998888888999999999999876 222 2334456788
8260
8261
8262 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK-----------QYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
8263 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~-----------~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
8264 .+..++.+ .++.++..++.+|.+++...+.... .+.+.+.++.+..++.+. ++.++..++.+
8265 T Consensus 365 ~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~-~~~v~~~a~~~ 437 (450)
8266 T 2JDQ_A 365 PLCDLLTV------MDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFLQSHE-NQEIYQKAFDL 437 (450)
8267 T ss_dssp HHHHGGGS------SCHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCHHHHHHHHHHCHHHHHHHHCHH-HHHHHHHHHHH
8268 T ss_pred HHHHHhhC------CCHHHHHHHHHHHHHHHHHhHHHHhhCCCCCCHHHHHHHHhccHHHHHHHHhCC-CHHHHHHHHHH
8269 Confidence 88888876 3678888999999999875332221 233445667776666665 77889999999
8270
8271
8272 Q NP_000290.2 708 LSDMWSSKE 716 (747)
8273 Q Consensus 708 LsnL~~~~~ 716 (747)
8274 +.++....+
8275 T Consensus 438 l~~~~~~~~ 446 (450)
8276 T 2JDQ_A 438 IEHYFGTED 446 (450)
8277 T ss_dssp HHHHHCCC-
8278 T ss_pred HHHHhcCcc
8279 Confidence 988876544
8280
8281
8282 No 174
8283 >3GQ2_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.18A {Bos taurus}
8284 Probab=96.33 E-value=1.5e-05 Score=88.20 Aligned_cols=169 Identities=12% Similarity=0.125 Sum_probs=105.6 Template_Neff=10.100
8285
8286 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKK----DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS-----DV-- 611 (747)
8287 Q Consensus 543 lve~G~I~~LL~LL~ss~d----~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~-----eV-- 611 (747)
8288 +++.|+++.|+.++.. .. ..++..++.+|.+++..+.. ....+.+.++++.|..++...+. ..
8289 T Consensus 204 l~~~g~~~~L~~ll~~-~~~~~~~~v~~~al~~L~~L~~~~~~-----~~~~~~e~~~i~~L~~lL~~~~~~~~~~~~~~ 277 (651)
8290 T 3GQ2_A 204 VAFENAFERLLDIITE-EGNSDGGIVVEDCLILLQNLLKNNNS-----NQNFFKEGSYIQRMKPWFEVGDENSGWSAQKV 277 (651)
8291 T ss_dssp HHHTTHHHHHHHHHHH-TTGGGSHHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTCGGGTGGGGCCCSSCCCCCHHHH
8292 T ss_pred HHhCChHHHHHHHHHH-hCCCCccHHHHHHHHHHHHHHhCCHH-----HHHHHHhcChHHHHHHHHhcCCccCCCchHHH
8293 Confidence 4577889999998873 32 25777899999999875432 34455567889999988874331 11
8294
8295
8296 Q NP_000290.2 612 --VRSGASLLSNMSRH-------PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFS 681 (747)
8297 Q Consensus 612 --r~~AL~aLsnLa~~-------~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve 681 (747)
8298 ...++.++..++.. ... ..+...++++.|+.++.... .+..++..++.+|++++..++.....+.+
8299 T Consensus 278 ~~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~g~l~~L~~ll~~~~----~~~~v~~~a~~~La~l~~~~~~~q~~~~~ 353 (651)
8300 T 3GQ2_A 278 TNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMATG----VPADILTETINTVSEVIRGCQVNQDYFAS 353 (651)
8301 T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTTHHHHHHHHHHCSS----CCHHHHHHHHHHHHHHHTTCHHHHHHHHH
8302 T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHhcCHHHHHHHHh
8303 Confidence 22334444444421 112 23356678888888886520 14578889999999998865555444444
8304
8305
8306 Q NP_000290.2 682 S--------SMLNNIINLCRSS-ASPKAAEAARLLLSDMWSS-KELQGVL 721 (747)
8307 Q Consensus 682 ~--------giL~~Ll~LL~s~-~d~eVr~aAL~aLsnL~~~-~~~~~~~ 721 (747)
8308 . +.+..|+.++... .+..++..++.+|.+++.. .+.+..+
8309 T Consensus 354 ~~~~~~~~~~~l~~Ll~~l~~~~~~~~~r~~al~~L~~~~~~~~~~~~~l 403 (651)
8310 T 3GQ2_A 354 VNAPSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEI 403 (651)
8311 T ss_dssp CBCCSSSCCBHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHTTCHHHHHHH
8312 T ss_pred CCCCCCCCchHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
8313 Confidence 2 2355666665432 1567888999999666653 3334333
8314
8315
8316 No 175
8317 >3GRL_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.0A {Bos taurus}
8318 Probab=96.33 E-value=1.5e-05 Score=88.20 Aligned_cols=169 Identities=12% Similarity=0.125 Sum_probs=105.6 Template_Neff=10.100
8319
8320 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKK----DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS-----DV-- 611 (747)
8321 Q Consensus 543 lve~G~I~~LL~LL~ss~d----~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~-----eV-- 611 (747)
8322 +++.|+++.|+.++.. .. ..++..++.+|.+++..+.. ....+.+.++++.|..++...+. ..
8323 T Consensus 204 l~~~g~~~~L~~ll~~-~~~~~~~~v~~~al~~L~~L~~~~~~-----~~~~~~e~~~i~~L~~lL~~~~~~~~~~~~~~ 277 (651)
8324 T 3GRL_A 204 VAFENAFERLLDIITE-EGNSDGGIVVEDCLILLQNLLKNNNS-----NQNFFKEGSYIQRMKPWFEVGDENSGWSAQKV 277 (651)
8325 T ss_dssp HHHTTHHHHHHHHHHH-HTGGGSHHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTCGGGGGGGGCCCSCSSCCCHHHH
8326 T ss_pred HHhCChHHHHHHHHHH-hCCCCccHHHHHHHHHHHHHHhCCHH-----HHHHHHhcChHHHHHHHHhcCCccCCCchHHH
8327 Confidence 4577889999998873 32 25777899999999875432 34455567889999988874331 11
8328
8329
8330 Q NP_000290.2 612 --VRSGASLLSNMSRH-------PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFS 681 (747)
8331 Q Consensus 612 --r~~AL~aLsnLa~~-------~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve 681 (747)
8332 ...++.++..++.. ... ..+...++++.|+.++.... .+..++..++.+|++++..++.....+.+
8333 T Consensus 278 ~~~~~~~~il~~l~~~~~~~~~~~~~~~~l~~~g~l~~L~~ll~~~~----~~~~v~~~a~~~La~l~~~~~~~q~~~~~ 353 (651)
8334 T 3GRL_A 278 TNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMATG----VPADILTETINTVSEVIRGCQVNQDYFAS 353 (651)
8335 T ss_dssp HHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTCSS----CCHHHHHHHHHHHHHHHTTCHHHHHHHHH
8336 T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHhcCHHHHHHHHh
8337 Confidence 22334444444421 112 23356678888888886520 14578889999999998865555444444
8338
8339
8340 Q NP_000290.2 682 S--------SMLNNIINLCRSS-ASPKAAEAARLLLSDMWSS-KELQGVL 721 (747)
8341 Q Consensus 682 ~--------giL~~Ll~LL~s~-~d~eVr~aAL~aLsnL~~~-~~~~~~~ 721 (747)
8342 . +.+..|+.++... .+..++..++.+|.+++.. .+.+..+
8343 T Consensus 354 ~~~~~~~~~~~l~~Ll~~l~~~~~~~~~r~~al~~L~~~~~~~~~~~~~l 403 (651)
8344 T 3GRL_A 354 VNAPSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEI 403 (651)
8345 T ss_dssp CEESSSSCEEHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHTTCHHHHHHH
8346 T ss_pred CCCCCCCCchHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
8347 Confidence 2 2355666665432 1567888999999666653 3334333
8348
8349
8350 No 176
8351 >3TT9_A Plakophilin-2; CELL ADHESION; HET: GOL; 1.55A {Homo sapiens}
8352 Probab=96.31 E-value=1.5e-05 Score=72.85 Aligned_cols=113 Identities=18% Similarity=0.215 Sum_probs=69.5 Template_Neff=12.300
8353
8354 Q NP_000290.2 246 TIPKAVQYLS-SQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP---------------NQNVQQAAAG 309 (747)
8355 Q Consensus 246 iL~~Ll~lL~-ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~---------------d~eVr~~AL~ 309 (747)
8356 +++.++.++. ..+..++..++.++.+++... .....+...+++..+..++... +..++..++.
8357 T Consensus 95 ~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~-~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 173 (233)
8358 T 3TT9_A 95 GVPRLLQVLKQTRDLETKKQITGLLWNLSSND-KLKNLMITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTG 173 (233)
8359 T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSG-GGHHHHHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHH
8360 T ss_pred cHHHHHHHHhhCCCHHHHHHHHHHHHHHccCH-HHHHHhhhhcHHHHHHHHHhhccCCCCCCCCcccCCCcHHHHHHHHH
8361 Confidence 4555666665 456778888999999987633 2233333344555555554322 4567778888
8362
8363
8364 Q NP_000290.2 310 ALRNLVFRSTTNKLETRRQNG-IREAVSLLRRTG------NAEIQKQLTGLLWNLSST 360 (747)
8365 Q Consensus 310 aLs~La~~~~~~~~~ll~~~I-L~~Ll~lL~ss~------d~eVr~~AL~aLsnLas~ 360 (747)
8366 ++.+++...+.....+...+. ++.+..++. .. ++.++..++.+|.+++..
8367 T Consensus 174 ~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~~~~L~~l~~~ 230 (233)
8368 T 3TT9_A 174 CLRNMSSAGADGRKAMRRCDGLIDSLVHYVR-GTIADYQPDDKATENCVCILHNLSYQ 230 (233)
8369 T ss_dssp HHHHHTTSCHHHHHHHHTSTTHHHHHHHHHH-HHHHTTCTTCHHHHHHHHHHHHHCCC
8370 T ss_pred HHHHHHhcCHHHHHHHHHcccHHHHHHHHHH-cccccCCCChHHHHHHHHHHHHhhhc
8371 Confidence 888887643333333433344 777777775 33 466777788888777653
8372
8373
8374 No 177
8375 >5D5K_C Importin subunit alpha-1, Poly [ADP-ribose]; PARP-2 NLS, PARP-2, poly(ADP-ribose)polymerase-2, Importin; 1.9A {Mus musculus}
8376 Probab=96.29 E-value=1.5e-05 Score=79.23 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=78.1 Template_Neff=13.100
8377
8378 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-TTNKLE 324 (747)
8379 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~-~~~~~~ 324 (747)
8380 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++... ......
8381 T Consensus 273 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 352 (466)
8382 T 5D5K_C 273 ALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVY 352 (466)
8383 T ss_dssp GGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHH
8384 T ss_pred hhHhHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHH
8385 Confidence 4555666666667788888999998887654433333444467777888887777788889999998887642 222222
8386
8387
8388 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
8389 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
8390 +...++++.+...+. ..++.++..++.++..++.
8391 T Consensus 353 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~ 386 (466)
8392 T 5D5K_C 353 LVHCGIIEPLMNLLS-AKDTKIIQVILDAISNIFQ 386 (466)
8393 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHH
8394 T ss_pred HHhCCcHHHHHHHhh-cCCHHHHHHHHHHHHHHHH
8395 Confidence 333346777777776 5567788889999988876
8396
8397
8398 No 178
8399 >4UAF_B Importin alpha 1 import receptor; importin karyopherin complex NLS, PROTEIN; HET: PO4; 1.698A {Mus musculus}
8400 Probab=96.28 E-value=1.6e-05 Score=79.14 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=78.0 Template_Neff=13.100
8401
8402 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-TTNKLE 324 (747)
8403 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~-~~~~~~ 324 (747)
8404 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++... ......
8405 T Consensus 273 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 352 (466)
8406 T 4UAF_B 273 ALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVY 352 (466)
8407 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHH
8408 Confidence 4555666666667788888999999887654433333444467777888887777788889999998887642 222222
8409
8410
8411 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
8412 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
8413 +...++++.+...+. ..++.++..++.++..++.
8414 T Consensus 353 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~ 386 (466)
8415 T 4UAF_B 353 LVHCGIIEPLMNLLS-AKDTKIIQVILDAISNIFQ 386 (466)
8416 T ss_pred HHhCCcHHHHHHHhh-cCCHHHHHHHHHHHHHHHH
8417 Confidence 333346777777776 5567788889999988876
8418
8419
8420 No 179
8421 >2JDQ_A IMPORTIN ALPHA-1 SUBUNIT, POLYMERASE BASIC; TRANSPORT, PB2 SUBUNIT, NUCLEAR PROTEIN; 2.2A {HOMO SAPIENS}
8422 Probab=96.23 E-value=1.8e-05 Score=78.41 Aligned_cols=134 Identities=18% Similarity=0.203 Sum_probs=87.8 Template_Neff=13.000
8423
8424 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8425 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8426 +++.+...+.+.+..++..++.++..++.........+...++++.+...+.+.++.++..++.++..++..........
8427 T Consensus 235 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 314 (450)
8428 T 2JDQ_A 235 VCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTV 314 (450)
8429 T ss_dssp THHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
8430 T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHhhCChHHHHHHhhcchHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
8431 Confidence 45566666666677888889999998887544333333334677778888877777888899999998876544333333
8432
8433
8434 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST--DELKEELIA-DALPVLADRVI 380 (747)
8435 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~--~~~~~~Lve-giLe~Lv~LL~ 380 (747)
8436 ...++++.+...+. ..++.++..++.++..++.. ......+.. ++++.|..++.
8437 T Consensus 315 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~ 371 (450)
8438 T 2JDQ_A 315 IDANIFPALISILQ-TAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLT 371 (450)
8439 T ss_dssp HHTTHHHHHHHHHH-HSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGG
8440 T ss_pred HhCCHHHHHHHHHh-cCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHCCcHHHHHHHhh
8441 Confidence 34457777777776 55677888888888888764 222222222 45555555554
8442
8443
8444 No 180
8445 >3IFQ_A plakoglobin, E-cadherin; armadillo repeat, Cardiomyopathy, Cell adhesion; HET: SO4; 2.8A {Homo sapiens}
8446 Probab=96.23 E-value=1.8e-05 Score=80.55 Aligned_cols=367 Identities=18% Similarity=0.234 Sum_probs=218.1 Template_Neff=13.100
8447
8448 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP-NQNVQQAAAGALRNLVFRSTTNKL 323 (747)
8449 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~-d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
8450 .+++.+...+.+.++.++..++.++..+....+.....+...++++.+...+... +..++..++.++..+..... ...
8451 T Consensus 145 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~-~~~ 223 (553)
8452 T 3IFQ_A 145 DGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQESKLIILANGGPQALVQIMRNYSYEKLLWTTSRVLKVLSVCPS-NKP 223 (553)
8453 T ss_dssp TGGGGTGGGGGSSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTT-HHH
8454 T ss_pred CHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCCcc-hHH
8455 Confidence 4556666667667778888899999988764443333333445677777777654 56778888888888876322 222
8456
8457
8458 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVF 403 (747)
8459 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~ 403 (747)
8460 .+...++++.+...+. ..++.++..++.++..++....... ...++++.+..++.. .++++.
8461 T Consensus 224 ~~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~-~~~~~~~~l~~~l~~----------------~~~~~~ 285 (553)
8462 T 3IFQ_A 224 AIVEAGGMQALGKHLT-SNSPRLVQNCLWTLRNLSDVATKQE-GLESVLKILVNQLSV----------------DDVNVL 285 (553)
8463 T ss_dssp HHHHTTHHHHHHGGGG-SSCHHHHHHHHHHHHHHHTTCTTCS-CCHHHHHHHHTTTTC----------------CCHHHH
8464 T ss_pred HHHHCchHHHHHHHHh-cCCHHHHHHHHHHHHHhCChhHHHH-HHHHHHHHHHHHcCC----------------CCHHHH
8465 Confidence 3333456777777776 5567788888888888876432211 112455555555532 133333
8466
8467
8468 Q NP_000290.2 404 FNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLS 483 (747)
8469 Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (747)
8470 ..+..++..-.. ..+ ...+.+. -.+.++.++..+.. ..-+..-.+.+..+|.++.
8471 T Consensus 286 ~~a~~~l~~l~~------~~~--------------~~~~~~~-~~~~~~~l~~~l~~----~~~~~~~~~~a~~~l~~l~ 340 (553)
8472 T 3IFQ_A 286 TCATGTLSNLTC------NNS--------------KNKTLVT-QNSGVEALIHAILR----AGDKDDITEPAVCALRHLT 340 (553)
8473 T ss_dssp HHHHHHHHHHTT------TCH--------------HHHHHHT-TTTHHHHHHHHHHH----HTTCHHHHHHHHHHHHHHT
8474 T ss_pred HHHHHHHHHHHc------CCH--------------HHHHHHH-HccHHHHHHHHHHH----cCCChHhHHHHHHHHHHHh
8475 Confidence 333333321100 000 0000000 01233333332211 0011222333344444443
8476
8477
8478 Q NP_000290.2 484 YRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDA 563 (747)
8479 Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~e 563 (747)
8480 ...+.. ......+...++++.++.++....++.
8481 T Consensus 341 ~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~l~~~l~~~~~~~ 373 (553)
8482 T 3IFQ_A 341 SRHPEA-----------------------------------------------EMAQNSVRLNYGIPAIVKLLNQPNQWP 373 (553)
8483 T ss_dssp SSSTTH-----------------------------------------------HHHHHHHHTTTHHHHHHHGGGCTTCHH
8484 T ss_pred cCCChH-----------------------------------------------HHHHHHHHHcchHHHHHHHHcCCCChH
8485 Confidence 211100 000112234566788888887322367
8486
8487
8488 Q NP_000290.2 564 TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNS---------------------DVVRSGASLLSNM 622 (747)
8489 Q Consensus 564 Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~---------------------eVr~~AL~aLsnL 622 (747)
8490 ++..++.+|.+++.... ....+...++++.|..++.+.+. .++..++.+|.++
8491 T Consensus 374 ~~~~a~~~l~~l~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 447 (553)
8492 T 3IFQ_A 374 LVKATIGLIRNLALCPA------NHAPLQEAAVIPRLVQLLVKAHQDAQRHVAAGTQQPYTDGVRMEEIVEGCTGALHIL 447 (553)
8493 T ss_dssp HHHHHHHHHHHHTTSGG------GHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCCCTTCSSCCHHHHHHHHHHHHHHH
8494 T ss_pred HHHHHHHHHHHHhcCcc------cHHHHHHccHHHHHHHHHHHcCcchhHHHhhcccCccccCCCHHHHHHHHHHHHHHH
8495 Confidence 78889999999887532 12333456788888888876554 7888899999998
8496
8497
8498 Q NP_000290.2 623 SRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
8499 Q Consensus 623 a~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
8500 +..... ......++++.+..++.+ .++.++..++.+|.+++.. +.....+.+.++++.|..++.+. ++.++
8501 T Consensus 448 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~-~~~v~ 519 (553)
8502 T 3IFQ_A 448 ARDPMNRMEIFRLNTIPLFVQLLYS------SVENIQRVAAGVLCELAQD-KEAADAIDAEGASAPLMELLHSR-NEGTA 519 (553)
8503 T ss_dssp TTSHHHHHHHHHTTCHHHHHHHTTC------SCHHHHHHHHHHHHHHTTS-HHHHHHHHHTTTHHHHHHHTTCS-SHHHH
8504 T ss_pred hcChhhHHHHHHcCChHHHHHHHhC------CCHHHHHHHHHHHHHHHcC-HHHHHHHHHCCcHHHHHHHHhCC-CHHHH
8505 Confidence 875333 233445677888888775 3678899999999999875 44555555667888898888877 78899
8506
8507
8508 Q NP_000290.2 702 EAARLLLSDMWSSKE 716 (747)
8509 Q Consensus 702 ~aAL~aLsnL~~~~~ 716 (747)
8510 ..++.+|.+++...+
8511 T Consensus 520 ~~a~~~l~~l~~~~~ 534 (553)
8512 T 3IFQ_A 520 TYAAAVLFRISEDKN 534 (553)
8513 T ss_dssp HHHHHHHHHTTSTTC
8514 T ss_pred HHHHHHHHHHHcccC
8515 Confidence 999999999996543
8516
8517
8518 No 181
8519 >4BQK_A IMPORTIN SUBUNIT ALPHA-1A, T-DNA BORDER; TRANSPORT PROTEIN, HYDROLASE, NUCLEAR LOCALIZATION; HET: PEG; 1.997A {ORYZA SATIVA}
8520 Probab=96.23 E-value=1.9e-05 Score=78.53 Aligned_cols=116 Identities=19% Similarity=0.202 Sum_probs=77.5 Template_Neff=13.000
8521
8522 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
8523 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
8524 .+++.+...+.+.+..++..++.++..+....+.....+...++++.+...+.+.+..++..++.++..++.........
8525 T Consensus 172 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 251 (456)
8526 T 4BQK_A 172 PALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQC 251 (456)
8527 T ss_dssp THHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
8528 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCChHHHHHHHHhCCCHHHHHHHHHHHHHHHcCCHHHHHH
8529 Confidence 34556666666677788888999998887654433333334466777777777777788888999998887654333233
8530
8531
8532 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
8533 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
8534 +...++++.+...+....++.++..++.++..++..
8535 T Consensus 252 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~ 287 (456)
8536 T 4BQK_A 252 IIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAG 287 (456)
8537 T ss_dssp HHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTS
8538 T ss_pred HHHCChHHHHHHHHHcCCCHHHHHHHHHHHHHHhcC
8539 Confidence 333456677777775222566777888888887754
8540
8541
8542 No 182
8543 >4U5L_A deltaIBB-importin-alpha1; TPX2, inhibitor, TRANSPORT PROTEIN; HET: 3D6; 2.53A {Mus musculus}
8544 Probab=96.17 E-value=2.2e-05 Score=76.74 Aligned_cols=115 Identities=21% Similarity=0.205 Sum_probs=78.3 Template_Neff=13.200
8545
8546 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
8547 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
8548 .+++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.++.++..++.++..++...+.....
8549 T Consensus 180 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 259 (426)
8550 T 4U5L_A 180 QILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQK 259 (426)
8551 T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHH
8552 T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhCCcHHHHHHhhcChHHHHHHHhcCCCccHHHHHHHHHHHHhcCCHHHHHH
8553 Confidence 45556666666677788888999998887654433333344457777888887777788889999998888654333333
8554
8555
8556 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
8557 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
8558 +...++++.+...+. +.++.++..++.++..++..
8559 T Consensus 260 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~ 294 (426)
8560 T 4U5L_A 260 VIDAGALAVFPSLLT-NPKTNIQKEATWTMSNITAG 294 (426)
8561 T ss_dssp HHHTTGGGGHHHHTT-CSSHHHHHHHHHHHHHHTTS
8562 T ss_pred HhccchHHHHHHHhc-CCChHHHHHHHHHHHHHhcC
8563 Confidence 334456677777775 45667777777777777653
8564
8565
8566 No 183
8567 >4BPL_A IMPORTIN SUBUNIT ALPHA-1A, NUCLEOPLASMIN NLS; TRANSPORT PROTEIN, NUCLEAR IMPORT, NUCLEAR; 2.3A {ORYZA SATIVA}
8568 Probab=96.16 E-value=2.3e-05 Score=77.77 Aligned_cols=135 Identities=18% Similarity=0.197 Sum_probs=84.9 Template_Neff=13.000
8569
8570 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
8571 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
8572 .+++.+...+.+.+..++..++.++..+....+.....+...++++.+...+.+.+..++..++.++..++.........
8573 T Consensus 170 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 249 (454)
8574 T 4BPL_A 170 PALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQC 249 (454)
8575 T ss_dssp THHHHHHHHTTCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
8576 T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCChHHHHHHHHCCcHHHHHHHhhCCChHHHHHHHHHHHHHhcCCHHHHHH
8577 Confidence 34556666666677788888999998887654433333334456777777777777788888999998887654333233
8578
8579
8580 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRV 379 (747)
8581 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL 379 (747)
8582 +...++++.+...+....++.++..++.++..++..... ...+.. ++++.|..++
8583 T Consensus 250 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l 306 (454)
8584 T 4BPL_A 250 IIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLL 306 (454)
8585 T ss_dssp HHTTTHHHHHHHHHHSSCCHHHHHHHHHHHHHHHTSCHHHHHHHHHHTCHHHHHHHH
8586 T ss_pred HHHCChHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCcHHHHHHHh
8587 Confidence 333456677777775222567778888888887754321 112222 4555555544
8588
8589
8590 No 184
8591 >4MZ6_E Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial, Importin; ARM repeat, protein transport, Importin; 1.88A {Mus musculus}
8592 Probab=96.12 E-value=2.6e-05 Score=79.03 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=77.9 Template_Neff=12.800
8593
8594 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-TTNKLE 324 (747)
8595 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~-~~~~~~ 324 (747)
8596 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++... ......
8597 T Consensus 317 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 396 (509)
8598 T 4MZ6_E 317 ALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVY 396 (509)
8599 T ss_dssp GGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHH
8600 T ss_pred hHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHH
8601 Confidence 4455566666667788888999998887654433333444467777888887777788889999998887642 222223
8602
8603
8604 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
8605 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
8606 +...++++.+...+. ..++.++..++.++..++.
8607 T Consensus 397 ~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~ 430 (509)
8608 T 4MZ6_E 397 LVHCGIIEPLMNLLS-AKDTKIIQVILDAISNIFQ 430 (509)
8609 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHH
8610 T ss_pred HHhCCCHHHHHHHHh-CCCHHHHHHHHHHHHHHHH
8611 Confidence 333346777777776 5567788889999988876
8612
8613
8614 No 185
8615 >5UMZ_B Importin subunit alpha-1, TNRC6A; mRNA decay, miRNA ARM repeat; HET: GOL; 1.9A {Mus musculus}
8616 Probab=96.12 E-value=2.6e-05 Score=79.03 Aligned_cols=113 Identities=17% Similarity=0.142 Sum_probs=77.9 Template_Neff=12.800
8617
8618 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-TTNKLE 324 (747)
8619 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~-~~~~~~ 324 (747)
8620 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++... ......
8621 T Consensus 317 ~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 396 (509)
8622 T 5UMZ_B 317 ALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVY 396 (509)
8623 T ss_dssp GGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHH
8624 T ss_pred hHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHH
8625 Confidence 4455566666667788888999998887654433333444467777888887777788889999998887642 222223
8626
8627
8628 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
8629 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
8630 +...++++.+...+. ..++.++..++.++..++.
8631 T Consensus 397 ~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~ 430 (509)
8632 T 5UMZ_B 397 LVHCGIIEPLMNLLS-AKDTKIIQVILDAISNIFQ 430 (509)
8633 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHH
8634 T ss_pred HHhCCCHHHHHHHHh-CCCHHHHHHHHHHHHHHHH
8635 Confidence 333346777777776 5567788889999988876
8636
8637
8638 No 186
8639 >4E4V_A Importin subunit alpha-2; armadillo repeat, karyopherin, importin, nuclear; HET: GOL, DTT; 2.5283A {Homo sapiens}
8640 Probab=96.12 E-value=2.7e-05 Score=78.66 Aligned_cols=113 Identities=17% Similarity=0.130 Sum_probs=78.1 Template_Neff=12.700
8641
8642 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRST-TNKLE 324 (747)
8643 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~-~~~~~ 324 (747)
8644 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++.... .....
8645 T Consensus 292 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 371 (485)
8646 T 4E4V_A 292 ALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVY 371 (485)
8647 T ss_dssp GGGGHHHHHTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHH
8648 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHCCHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCHHHHHH
8649 Confidence 45556666666677888889999998876544333334444677778888877777888889999988876422 22222
8650
8651
8652 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
8653 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
8654 +...++++.+...+. ..++.++..++.++..++.
8655 T Consensus 372 ~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~ 405 (485)
8656 T 4E4V_A 372 LVHCGIIEPLMNLLT-AKDTKIILVILDAISNIFQ 405 (485)
8657 T ss_dssp HHHTTCHHHHHHGGG-CSCHHHHHHHHHHHHHHHH
8658 T ss_pred HHhCCcHHHHHHHhh-cCCHHHHHHHHHHHHHHHH
8659 Confidence 333346777777776 5567788889999988886
8660
8661
8662 No 187
8663 >3GQ2_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.18A {Bos taurus}
8664 Probab=96.07 E-value=3.4e-05 Score=85.21 Aligned_cols=176 Identities=12% Similarity=0.192 Sum_probs=126.8 Template_Neff=10.100
8665
8666 Q NP_000290.2 543 LYHSDAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSSG--------------MSQLIGL-KEKGLPQIARLLQS 606 (747)
8667 Q Consensus 543 lve~G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~~--------------~~~~lli-e~giI~~Ll~LL~s 606 (747)
8668 ++..++++.|+.+|... .+..++..++.+|.+++...+. .. .....+. +.+.++.|+.++.+
8669 T Consensus 56 ~v~~~~l~~Li~~L~~~~~d~~~~~~al~~L~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Ll~ll~~ 133 (651)
8670 T 3GQ2_A 56 EVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEE--EEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEE 133 (651)
8671 T ss_dssp HHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHCCSSS--CC----------CHHHHHHHHHHTSHHHHHTHHHHTTC
8672 T ss_pred HHHccHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCh--HhhhhcccccchHHHHHHHHHHHhcCchHHHHHHHccC
8673 Confidence 46778999999999731 3567788899999998864321 00 0012223 57888999999888
8674
8675
8676 Q NP_000290.2 607 GNSDVVRSGASLLSNMSRHP--LLH-RVM-GNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSS 682 (747)
8677 Q Consensus 607 ~d~eVr~~AL~aLsnLa~~~--e~~-~ll-~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~ 682 (747)
8678 .++.++..++++|.+++... ... .++ ..++++.|+.+|.+ .+..++..++.+|.+++..+++....+...
8679 T Consensus 134 ~~~~~~~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~~------~~~~i~~~a~~~L~~l~~~~~~~~~~l~~~ 207 (651)
8680 T 3GQ2_A 134 FDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLAD------SREVIRNDGVLLLQALTRSNGAIQKIVAFE 207 (651)
8681 T ss_dssp CCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHGGGGGC------SSHHHHHHHHHHHHHHHTTCHHHHHHHHHT
8682 T ss_pred CCHHHHHHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhcC------CCHHHHHHHHHHHHHHhCCCHHHHHHHHhC
8683 Confidence 88889999999999998773 222 233 45678889998876 367888999999999998555666666677
8684
8685
8686 Q NP_000290.2 683 SMLNNIINLCRSSAS---PKAAEAARLLLSDMWSSK-ELQGVLRQQGF 726 (747)
8687 Q Consensus 683 giL~~Ll~LL~s~~d---~eVr~aAL~aLsnL~~~~-~~~~~~~~~~~ 726 (747)
8688 ++++.|+.++..... ..++..++.+|.+|+... ..+..++..|+
8689 T Consensus 208 g~~~~L~~ll~~~~~~~~~~v~~~al~~L~~L~~~~~~~~~~~~e~~~ 255 (651)
8690 T 3GQ2_A 208 NAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSY 255 (651)
8691 T ss_dssp THHHHHHHHHHHTTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTC
8692 T ss_pred ChHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHhCCHHHHHHHHhcCh
8693 Confidence 889999998875411 257888999999988644 44555555554
8694
8695
8696 No 188
8697 >3GRL_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.0A {Bos taurus}
8698 Probab=96.07 E-value=3.4e-05 Score=85.21 Aligned_cols=176 Identities=12% Similarity=0.192 Sum_probs=126.4 Template_Neff=10.100
8699
8700 Q NP_000290.2 543 LYHSDAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSSG--------------MSQLIGL-KEKGLPQIARLLQS 606 (747)
8701 Q Consensus 543 lve~G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~~--------------~~~~lli-e~giI~~Ll~LL~s 606 (747)
8702 ++..++++.|+.+|... .+..++..++.+|.+++...+. .. .....+. +.+.++.|+.++.+
8703 T Consensus 56 ~v~~~~l~~Li~~L~~~~~d~~~~~~al~~L~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Ll~ll~~ 133 (651)
8704 T 3GRL_A 56 EVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEE--EEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEE 133 (651)
8705 T ss_dssp HCCCCCHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC----------------CHHHHHHHHHHHSTHHHHHHHHHTTC
8706 T ss_pred HHHccHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCCh--HhhhhcccccchHHHHHHHHHHHhcCchHHHHHHHccC
8707 Confidence 46778999999999731 3567788899999998864321 00 0012223 57888999999888
8708
8709
8710 Q NP_000290.2 607 GNSDVVRSGASLLSNMSRHP--LLH-RVM-GNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSS 682 (747)
8711 Q Consensus 607 ~d~eVr~~AL~aLsnLa~~~--e~~-~ll-~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~ 682 (747)
8712 .++.++..++++|.+++... ... .++ ..++++.|+.+|.+ .+..++..++.+|.+++..+++....+...
8713 T Consensus 134 ~~~~~~~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~~------~~~~i~~~a~~~L~~l~~~~~~~~~~l~~~ 207 (651)
8714 T 3GRL_A 134 FDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLAD------SREVIRNDGVLLLQALTRSNGAIQKIVAFE 207 (651)
8715 T ss_dssp CCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGC------SSHHHHHHHHHHHHHHHTTCHHHHHHHHHT
8716 T ss_pred CCHHHHHHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhcC------CCHHHHHHHHHHHHHHhCCCHHHHHHHHhC
8717 Confidence 88889999999999998773 222 233 45678889998876 367888999999999998555666666677
8718
8719
8720 Q NP_000290.2 683 SMLNNIINLCRSSAS---PKAAEAARLLLSDMWSSK-ELQGVLRQQGF 726 (747)
8721 Q Consensus 683 giL~~Ll~LL~s~~d---~eVr~aAL~aLsnL~~~~-~~~~~~~~~~~ 726 (747)
8722 ++++.|+.++..... ..++..++.+|.+|+... ..+..++..|+
8723 T Consensus 208 g~~~~L~~ll~~~~~~~~~~v~~~al~~L~~L~~~~~~~~~~~~e~~~ 255 (651)
8724 T 3GRL_A 208 NAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSY 255 (651)
8725 T ss_dssp THHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTC
8726 T ss_pred ChHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHhCCHHHHHHHHhcCh
8727 Confidence 889999998875411 257888999999988644 44555555554
8728
8729
8730 No 189
8731 >4V3Q_A YIII_M4_AII; DE NOVO PROTEIN, PROTEIN ENGINEERING; HET: GOL, CA; 1.8A {SYNTHETIC CONSTRUCT}
8732 Probab=96.03 E-value=3.4e-05 Score=69.70 Aligned_cols=112 Identities=26% Similarity=0.317 Sum_probs=74.8 Template_Neff=12.900
8733
8734 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8735 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8736 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
8737 T Consensus 135 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 214 (247)
8738 T 4V3Q_A 135 ALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQKQAV 214 (247)
8739 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
8740 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
8741 Confidence 45556666666677788888899988876543333333344567777777777777888889999988886543333333
8742
8743
8744 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
8745 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
8746 ...++++.+..++. ..++.++..++.++..+.
8747 T Consensus 215 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 246 (247)
8748 T 4V3Q_A 215 KEAGALEKLEQLQS-HENEKIQKEAQEALEKLQ 246 (247)
8749 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHT
8750 T ss_pred HHcCHHHHHHHHHh-CChHHHHHHHHHHHHHHc
8751 Confidence 33456677777775 456677777777776653
8752
8753
8754 No 190
8755 >4TNM_A Importin-alpha3 / MOS6; armadillo repeat; 2.9A {Arabidopsis thaliana}
8756 Probab=96.03 E-value=3.5e-05 Score=79.51 Aligned_cols=136 Identities=16% Similarity=0.178 Sum_probs=85.8 Template_Neff=12.300
8757
8758 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
8759 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
8760 .+++.+...+.+.++.++..++.++..++.........+...++++.+...+.+.++.++..++.++..++.........
8761 T Consensus 245 ~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 324 (531)
8762 T 4TNM_A 245 PALPVLERLVQSMDEEVLTDACWALSYLSDNSNDKIQAVIEAGVVPRLIQLLGHSSPSVLIPALRTIGNIVTGDDLQTQM 324 (531)
8763 T ss_pred chHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCChHHHHHHHHhCCCHHHHHHHHHHHHHHHCCCHHHHHH
8764 Confidence 34555666666667778888889988887654433333344467777778787777788888999998887654333223
8765
8766
8767 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVI 380 (747)
8768 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~ 380 (747)
8769 ....++++.+..++....++.++..++.++..++... .....+.. ++++.|..++.
8770 T Consensus 325 ~~~~~~~~~l~~~l~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 382 (531)
8771 T 4TNM_A 325 VLDQQALPCLLNLLKNNYKKSIKKEACWTISNITAGNADQIQAVIDAGIIQSLVWVLQ 382 (531)
8772 T ss_pred HHHCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCcHHHHHHHhc
8773 Confidence 3333566777777752235677888888888887643 22222222 45555555553
8774
8775
8776 No 191
8777 >4GMO_A Putative uncharacterized protein; ARM, HEAT, solenoid, nuclear transport; 2.1A {Chaetomium thermophilum var. thermophilum DSM 1495}
8778 Probab=95.93 E-value=5.4e-05 Score=85.22 Aligned_cols=94 Identities=14% Similarity=0.083 Sum_probs=69.0 Template_Neff=8.600
8779
8780 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLV-DLLRSPNQNVQQAAAGALRNLVFRS-TTNK 322 (747)
8781 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll-~lL~s~d~eVr~~AL~aLs~La~~~-~~~~ 322 (747)
8782 ..+..|+..|.+.++.++..++.+|.+++.. +.....+...++++.|+ .++.+.+..++..++.+|.+++... ....
8783 T Consensus 34 ~~i~~Li~~L~S~~~~~r~~A~~aL~~L~~d-~~~r~~l~~~g~i~~Li~~LL~d~~~~v~~~A~~aLrNLs~~~~~~~~ 112 (684)
8784 T 4GMO_A 34 DKILPVLKDLKSPDAKSRTTAAGAIANIVQD-AKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFC 112 (684)
8785 T ss_dssp CCCHHHHHHHSSSCCSHHHHHHHHHHHHTTS-HHHHHHHHHTTHHHHCCCCCTTCSCHHHHHHHHHHHHHHHHHSCHHHH
8786 T ss_pred CChHHHHHHcCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHCChHHHHHHHHccCCCHHHHHHHHHHHHHHhccCChHHH
8787 Confidence 4566778888888888999999999998763 44555566678888888 8888878889999999999998652 2333
8788
8789
8790 Q NP_000290.2 323 LETRRQNGIREAVSLLR 339 (747)
8791 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ 339 (747)
8792 ..+...+++..|..++.
8793 T Consensus 113 ~~l~~~g~l~~L~~lL~ 129 (684)
8794 T 4GMO_A 113 VHLYRLDVLTAIEHAAK 129 (684)
8795 T ss_dssp HHHHHTTHHHHHHHHHH
8796 T ss_pred HHHHHCChHHHHHHHHH
8797 Confidence 34444566676666664
8798
8799
8800 No 192
8801 >4PLS_B Arm00010; PEPTIDE BINDING PROTEIN, designed armadillo; HET: CA; 2.35A {synthetic construct}
8802 Probab=95.89 E-value=4.9e-05 Score=69.42 Aligned_cols=134 Identities=25% Similarity=0.295 Sum_probs=87.2 Template_Neff=13.200
8803
8804 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8805 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8806 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..++..........
8807 T Consensus 86 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 165 (281)
8808 T 4PLS_B 86 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAV 165 (281)
8809 T ss_dssp CHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHH
8810 T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
8811 Confidence 45556666666677788888888888876543333333344677777777777777888899999988876543333333
8812
8813
8814 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
8815 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
8816 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
8817 T Consensus 166 ~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 221 (281)
8818 T 4PLS_B 166 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLS 221 (281)
8819 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
8820 T ss_pred HHCChHHHHHHHhc-CCcHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHcc
8821 Confidence 33456677777776 5567788888888888876422 2222222 56666666664
8822
8823
8824 No 193
8825 >5MFO_F YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: CA, EDO; 1.3A {synthetic construct}
8826 Probab=95.88 E-value=5e-05 Score=65.80 Aligned_cols=112 Identities=26% Similarity=0.298 Sum_probs=74.3 Template_Neff=13.100
8827
8828 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8829 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8830 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++.........+
8831 T Consensus 89 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 168 (202)
8832 T 5MFO_F 89 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAV 168 (202)
8833 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
8834 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHhcChHHHHHHH
8835 Confidence 45556666666677788888999988876543333333344677777777777777888889999988886543333333
8836
8837
8838 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
8839 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
8840 ...++++.+..++. ..++.++..++.++..++
8841 T Consensus 169 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 200 (202)
8842 T 5MFO_F 169 KEAGAEPALEQLQS-SPNEKIQKEAQEALEKIQ 200 (202)
8843 T ss_dssp HHTTHHHHHHTTTT-CSSHHHHHHHHHHHHHHH
8844 T ss_pred HHCCHHHHHHHHHc-CCCHHHHHHHHHHHHHHH
8845 Confidence 33456666777775 446677777777776654
8846
8847
8848 No 194
8849 >2RU4_A Armadillo Repeat Protein, N-terminal fragment; solenoid repeat, Armadillo repeat motif; NMR {synthetic construct}
8850 Probab=95.88 E-value=5.2e-05 Score=59.81 Aligned_cols=110 Identities=25% Similarity=0.264 Sum_probs=70.0 Template_Neff=12.800
8851
8852 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRR 327 (747)
8853 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~ 327 (747)
8854 +.+...+...+..++..++.++..++.........+...+.++.+...+.+.++.++..++.++.+++.........+..
8855 T Consensus 4 ~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 83 (115)
8856 T 2RU4_A 4 PQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVID 83 (115)
8857 T ss_dssp CCCCCCCCCCCCCCCSCCCCCCCCCCCSCTTHHHHHCCSSSHHHHHHGGGSSCHHHHHHHHHHHHHHHTTCHHHHHHHHT
8858 T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCchHHHHHHH
8859 Confidence 34455555556677888888888887654333333444456777777777667778888888888887554333333333
8860
8861
8862 Q NP_000290.2 328 QNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
8863 Q Consensus 328 ~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
8864 .+.++.+...+. ..++.++..++.++.+++
8865 T Consensus 84 ~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~ 113 (115)
8866 T 2RU4_A 84 AGALPALVQLLS-SPNEQILQEALWALSNIA 113 (115)
8867 T ss_dssp TTHHHHHHHGGG-SSCHHHHHHHHHHHHHHH
8868 T ss_pred CCcHHHHHHHhc-CCCHHHHHHHHHHHHHHh
8869 Confidence 456666666665 445667777777776654
8870
8871
8872 No 195
8873 >5AEI_B DESIGNED ARMADILLO REPEAT PROTEIN YIIIM5AII; DE NOVO PROTEIN, PROTEIN-PEPTIDE COMPLEX; HET: CA, ACT; 1.83A {SYNTHETIC CONSTRUCT}
8874 Probab=95.87 E-value=5.1e-05 Score=69.48 Aligned_cols=114 Identities=26% Similarity=0.296 Sum_probs=74.7 Template_Neff=13.200
8875
8876 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8877 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8878 +++.+...+.+.++.++..++.++..+..........+...++++.+...+.+.+..++..++.++..++.........+
8879 T Consensus 47 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 126 (286)
8880 T 5AEI_B 47 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 126 (286)
8881 T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
8882 T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcChHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHH
8883 Confidence 45556666666677888889999988876544333333344567777777777777888889999988876433332233
8884
8885
8886 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
8887 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
8888 ...++++.+...+. ..++.++..++.++..++..
8889 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 160 (286)
8890 T 5AEI_B 127 IDAGALPALVQLLS-SPNEQILQEALWALSNIASG 160 (286)
8891 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTS
8892 T ss_pred HhCCHHHHHHHHcc-CCCHHHHHHHHHHHHHHHcC
8893 Confidence 33446666666665 44566777777777776653
8894
8895
8896 No 196
8897 >5MFD_C YIIIM''6AII, Capsid decoration protein,pD_(KR)5; Designed armadillo repeat protein, peptide; HET: CA; 2.3A {synthetic construct}
8898 Probab=95.87 E-value=5.1e-05 Score=70.81 Aligned_cols=157 Identities=20% Similarity=0.303 Sum_probs=116.5 Template_Neff=13.300
8899
8900 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
8901 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
8902 +.++++.+..++. +.++.++..++.+|.+++..... ....+...++++.+..++.+.++.++..++.+|.+++.
8903 T Consensus 128 ~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~ 201 (328)
8904 T 5MFD_C 128 DAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIAS 201 (328)
8905 T ss_dssp HTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTSCHH-----HHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHT
8906 T ss_pred HCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHH-----HHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHc
8907 Confidence 4456777888887 46777888899999998864332 22333456788888888888888899999999999987
8908
8909
8910 Q NP_000290.2 625 H-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAE 702 (747)
8911 Q Consensus 625 ~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~ 702 (747)
8912 . ... ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.+..++.+. ++.++.
8913 T Consensus 202 ~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~ 274 (328)
8914 T 5MFD_C 202 GGNEQIQAVIDAGALPALVQLLSS------PNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSP-NEQILQ 274 (328)
8915 T ss_dssp SCHHHHHHHHHTTCHHHHHHGGGC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS-CHHHHH
8916 T ss_pred CCHHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCChHHHHHHHhcCC-CHHHHH
8917 Confidence 6 222 233445677888888766 3677889999999999865555545555566788888888766 788899
8918
8919
8920 Q NP_000290.2 703 AARLLLSDMWSS 714 (747)
8921 Q Consensus 703 aAL~aLsnL~~~ 714 (747)
8922 .++.+|.+++..
8923 T Consensus 275 ~a~~~l~~l~~~ 286 (328)
8924 T 5MFD_C 275 EALWTLGNIASG 286 (328)
8925 T ss_dssp HHHHHHHHHHTS
8926 T ss_pred HHHHHHHHHhCC
8927 Confidence 999999999865
8928
8929
8930 No 197
8931 >5MFO_E YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: EDO, CA; 1.3A {synthetic construct}
8932 Probab=95.87 E-value=5.2e-05 Score=65.68 Aligned_cols=112 Identities=26% Similarity=0.298 Sum_probs=74.3 Template_Neff=13.100
8933
8934 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
8935 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
8936 +++.+...+.+.++.++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++.........+
8937 T Consensus 89 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 168 (202)
8938 T 5MFO_E 89 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAV 168 (202)
8939 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
8940 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCHHHHHHHH
8941 Confidence 45556666666667788888899988876543333333344677777777777777888889999988886543333333
8942
8943
8944 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
8945 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
8946 ...++++.+..++. ..++.++..++.++..++
8947 T Consensus 169 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 200 (202)
8948 T 5MFO_E 169 KEAGAEPALEQLQS-SPNEKIQKEAQEALEKIQ 200 (202)
8949 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHC
8950 T ss_pred HHCCHHHHHHHHHc-CCCHHHHHHHHHHHHHHH
8951 Confidence 33456666777775 446677777777776654
8952
8953
8954 No 198
8955 >5D5K_C Importin subunit alpha-1, Poly [ADP-ribose]; PARP-2 NLS, PARP-2, poly(ADP-ribose)polymerase-2, Importin; 1.9A {Mus musculus}
8956 Probab=95.85 E-value=5.5e-05 Score=74.91 Aligned_cols=158 Identities=19% Similarity=0.271 Sum_probs=114.4 Template_Neff=13.100
8957
8958 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDA-----TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASL 618 (747)
8959 Q Consensus 544 ve~G~I~~LL~LL~ss~d~e-----Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~a 618 (747)
8960 .+.++++.++.++.. .+.. ++..++.+|.+++..... ........++++.+..++.+.++.++..++.+
8961 T Consensus 138 ~~~~~~~~l~~~l~~-~~~~~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~ 211 (466)
8962 T 5D5K_C 138 IKHGAIDPLLALLAV-PDLSTLACGYLRNLTWTLSNLCRNKNP-----APPLDAVEQILPTLVRLLHHNDPEVLADSCWA 211 (466)
8963 T ss_dssp HHTTCHHHHHHTTCS-SCGGGSCHHHHHHHHHHHHHHSCCCSS-----CCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHH
8964 T ss_pred HHCCcHHHHHHHhhC-CCcccccHHHHHHHHHHHHHHHcCCCC-----CCChHHHHHHHHHHHHHHcCCCHHHHHHHHHH
8965 Confidence 355667777777763 3333 677888888888765322 11121225678888888888888899999999
8966
8967
8968 Q NP_000290.2 619 LSNMSRHPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
8969 Q Consensus 619 LsnLa~~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
8970 |.+++.... . ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.+..++.+.
8971 T Consensus 212 l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 284 (466)
8972 T 5D5K_C 212 ISYLTDGPNERIEMVVKKGVVPQLVKLLGA------TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP- 284 (466)
8973 T ss_dssp HHHHTSSCHHHHHHHHTTTCHHHHHHHHTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCS-
8974 T ss_pred HHHHhcCCchHHHHHHHCChHHHHHHHhcC------CCchHHHHHHHHHHHHhcCCHHHHHHHHccChhHhHHHHhhCC-
8975 Confidence 999987632 2 233455677888888876 3678889999999999876455555566667888888888766
8976
8977
8978 Q NP_000290.2 697 SPKAAEAARLLLSDMWSS 714 (747)
8979 Q Consensus 697 d~eVr~aAL~aLsnL~~~ 714 (747)
8980 ++.++..++.+|.+++..
8981 T Consensus 285 ~~~v~~~a~~~l~~l~~~ 302 (466)
8982 T 5D5K_C 285 KTNIQKEATWTMSNITAG 302 (466)
8983 T ss_dssp SHHHHHHHHHHHHHHTTS
8984 T ss_pred CHHHHHHHHHHHHHHHcC
8985 Confidence 788899999999998875
8986
8987
8988 No 199
8989 >1XQS_B HSPBP1 protein, Heat shock 70; armadillo repeat, superhelical twist, CHAPERONE; HET: AMP; 2.9A {Homo sapiens} SCOP: a.118.1.21
8990 Probab=95.84 E-value=5.9e-05 Score=71.37 Aligned_cols=116 Identities=18% Similarity=0.237 Sum_probs=80.5 Template_Neff=11.900
8991
8992 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
8993 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
8994 +++.+..++... +..++..++.++.+++.........+...+.++.+..++...+..++..++.++.+++.........
8995 T Consensus 109 ~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~ 188 (280)
8996 T 1XQS_B 109 ALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGT 188 (280)
8997 T ss_dssp HHHHHHHHHHSCSCHHHHHHHHHHHHHTTSSCHHHHHHHHTTTHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHCGGGHHH
8998 T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHCCHHHHHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHH
8999 Confidence 455566666654 6778888999999988654433334444567777888777667778888999999888654423333
9000
9001
9002 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
9003 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
9004 +...++++.+..++. ..++.++..++.++.+++....
9005 T Consensus 189 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~ 225 (280)
9006 T 1XQS_B 189 LCSMGMVQQLVALVR-TEHSPFHEHVLGALCSLVTDFP 225 (280)
9007 T ss_dssp HHTTTHHHHHHHHHT-SSCCTTHHHHHHHTTTSSTTCH
9008 T ss_pred HHhCCHHHHHHHHHc-CCCcHHHHHHHHHHHHHHhcCH
9009 Confidence 444467777777776 5567788888999998887543
9010
9011
9012 No 200
9013 >4UAF_B Importin alpha 1 import receptor; importin karyopherin complex NLS, PROTEIN; HET: PO4; 1.698A {Mus musculus}
9014 Probab=95.82 E-value=5.9e-05 Score=74.70 Aligned_cols=158 Identities=19% Similarity=0.271 Sum_probs=114.6 Template_Neff=13.100
9015
9016 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDA-----TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASL 618 (747)
9017 Q Consensus 544 ve~G~I~~LL~LL~ss~d~e-----Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~a 618 (747)
9018 .+.++++.++.++.. .+.. ++..++.+|.+++..... ........++++.+..++.+.++.++..++.+
9019 T Consensus 138 ~~~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~ 211 (466)
9020 T 4UAF_B 138 IKHGAIDPLLALLAV-PDLSTLACGYLRNLTWTLSNLCRNKNP-----APPLDAVEQILPTLVRLLHHNDPEVLADSCWA 211 (466)
9021 T ss_pred HHCCcHHHHHHHhhC-CCcccccHHHHHHHHHHHHHHHcCCCC-----CCChhHHHHHHHHHHHHHcCCCHHHHHHHHHH
9022 Confidence 355667777777763 3333 677888888888865332 11121225678888888888888999999999
9023
9024
9025 Q NP_000290.2 619 LSNMSRHPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
9026 Q Consensus 619 LsnLa~~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
9027 |.+++.... . ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+...++++.+..++.+.
9028 T Consensus 212 l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 284 (466)
9029 T 4UAF_B 212 ISYLTDGPNERIEMVVKKGVVPQLVKLLGA------TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP- 284 (466)
9030 T ss_pred HHHHhcCCcHHHHHHHHCChHHHHHHHhcC------CChhHHHHHHHHHHHHhcCCHHHHHHHhccCHHHHHHHHhcCC-
9031 Confidence 999987632 2 233455678888888876 3678889999999999876455555566667888888888766
9032
9033
9034 Q NP_000290.2 697 SPKAAEAARLLLSDMWSS 714 (747)
9035 Q Consensus 697 d~eVr~aAL~aLsnL~~~ 714 (747)
9036 ++.++..++.+|.+++..
9037 T Consensus 285 ~~~v~~~a~~~l~~l~~~ 302 (466)
9038 T 4UAF_B 285 KTNIQKEATWTMSNITAG 302 (466)
9039 T ss_pred CHHHHHHHHHHHHHHhcC
9040 Confidence 788899999999999875
9041
9042
9043 No 201
9044 >1XQR_A HspBP1 protein; armadillo repeat, superhelical twist, CHAPERONE; HET: MSE; 2.1A {Homo sapiens} SCOP: a.118.1.21
9045 Probab=95.82 E-value=6.4e-05 Score=72.71 Aligned_cols=116 Identities=18% Similarity=0.237 Sum_probs=81.0 Template_Neff=11.300
9046
9047 Q NP_000290.2 246 TIPKAVQYLSSQ-DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
9048 Q Consensus 246 iL~~Ll~lL~ss-d~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
9049 +++.+..++... ++.++..++.++.+++.........+...++++.+...+...+..++..++.++.+++.........
9050 T Consensus 125 ~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~ 204 (296)
9051 T 1XQR_A 125 ALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGT 204 (296)
9052 T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHH
9053 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHH
9054 Confidence 455566666654 6778889999999998754433334444567777887777667788888999999888754433333
9055
9056
9057 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
9058 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
9059 +...++++.+..++. ..++.++..++.+|.+++....
9060 T Consensus 205 ~~~~~~i~~L~~ll~-~~~~~~~~~a~~~L~~l~~~~~ 241 (296)
9061 T 1XQR_A 205 LCSMGMVQQLVALVR-TEHSPFHEHVLGALCSLVTDFP 241 (296)
9062 T ss_dssp HHHTTHHHHHHHHHT-SCCSTHHHHHHHHHHHHHTTCH
9063 T ss_pred HHhCCHHHHHHHHHc-CCChHHHHHHHHHHHHHHhcCH
9064 Confidence 444567777777776 4566788888899988887543
9065
9066
9067 No 202
9068 >6CRI_R Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
9069 Probab=95.81 E-value=6.2e-05 Score=78.24 Aligned_cols=151 Identities=10% Similarity=0.021 Sum_probs=91.7 Template_Neff=12.500
9070
9071 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ---SGNSDVVRSGASLLSNMS 623 (747)
9072 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~---s~d~eVr~~AL~aLsnLa 623 (747)
9073 ..++.|+.++. +.+..++..++.++..+....+. ....+++.+...+. ..+..++ .++++|+.+.
9074 T Consensus 414 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~~~~l~~~l~~~~~~~~~~r-~a~~~l~~~~ 481 (585)
9075 T 6CRI_R 414 WHIDTIMRVLT-TAGSYVRDDAVPNLIQLITNSVE----------MHAYTVQRLYKAILGDYSQQPLVQ-VAAWCIGEYG 481 (585)
9076 T ss_pred HHHHHHHHHHH-HhccccCccHHHHHHHHHhcCch----------HHHHHHHHHHHHHHCCCCCHHHHH-HHHHHHHHHH
9077 Confidence 35566666666 35566777777777777653211 11234555666653 3344556 7888888877
9078
9079
9080 Q NP_000290.2 624 RHPLLH--------RVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR 693 (747)
9081 Q Consensus 624 ~~~e~~--------~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~ 693 (747)
9082 ...... ......+++.|..++ .+ .+..++..++.+|..+....+. ....++..+..++.
9083 T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~------~~~~vr~~a~~al~~l~~~~~~-----~~~~~~~~l~~~~~ 550 (585)
9084 T 6CRI_R 482 DLLVSGQCEEEEPIQVTEDEVLDILESVLISNM------STSVTRGYALTAIMKLSTRFTC-----TVNRIKKVVSIYGS 550 (585)
9085 T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHHHhcccC------CCHHHHHHHHHHHHHHHhcCCc-----hHHHHHHHHHHHcc
9086 Confidence 642110 111234566666666 33 3567888999999998875332 22234555666666
9087
9088
9089 Q NP_000290.2 694 SSASPKAAEAARLLLSDMWSSKELQGVL 721 (747)
9090 Q Consensus 694 s~~d~eVr~aAL~aLsnL~~~~~~~~~~ 721 (747)
9091 +. ++.++..++.++..+..+......+
9092 T Consensus 551 ~~-~~~vr~~a~~~l~~l~~~~~~~~~l 577 (585)
9093 T 6CRI_R 551 SI-DVELQQRAVEYNALFKKYDHMRSAL 577 (585)
9094 T ss_pred CC-CHHHHHHHHHHHHHhhhHHHHHHHH
9095 Confidence 65 7889999999999988765544443
9096
9097
9098 No 203
9099 >6SA8_A ring-like DARPin-Armadillo fusion H83_D01, LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG; protein fusion, DARPin, Armadillo, shared; 2.4A {synthetic construct}
9100 Probab=95.78 E-value=6.8e-05 Score=80.44 Aligned_cols=136 Identities=26% Similarity=0.298 Sum_probs=92.6 Template_Neff=11.900
9101
9102 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
9103 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
9104 .+++.+...+.+.++.++..++.+|.+++...+.....+...++++.+..++.+.++.++..++.++..++.........
9105 T Consensus 262 ~~~~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 341 (671)
9106 T 6SA8_A 262 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQA 341 (671)
9107 T ss_dssp TCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHH
9108 T ss_pred CHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHhChHHHHHHHhcCCcHHHHHHHHHHHHHHhcCCcHHHHH
9109 Confidence 34556666666677788889999999887654333334444567788888888777888889999999987654433333
9110
9111
9112 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVII 381 (747)
9113 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
9114 +...++++.+...+. ..++.++..++.++..++.. ......+.. ++++.|+.++..
9115 T Consensus 342 ~~~~~~l~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 399 (671)
9116 T 6SA8_A 342 VIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSS 399 (671)
9117 T ss_dssp HHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGC
9118 T ss_pred HHhcChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCcHHHHHHHHcCcHHHHHHHhcC
9119 Confidence 334456777777776 55677888899999998873 332333333 677777776653
9120
9121
9122 No 204
9123 >5WBJ_A Regulatory-associated protein of TOR 1,Eukaryotic; Raptor, TOS, PROTEIN BINDING; 3.0A {Arabidopsis thaliana}
9124 Probab=95.77 E-value=8.1e-05 Score=89.51 Aligned_cols=168 Identities=12% Similarity=0.072 Sum_probs=120.9 Template_Neff=8.700
9125
9126 Q NP_000290.2 541 GWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG--NSDVVRSGASL 618 (747)
9127 Q Consensus 541 ~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~--d~eVr~~AL~a 618 (747)
9128 ..+...|+++.++.+|. +..++++..++.++.+++..++. .+..+.+.+++..|+.+|... .+.++..++.+
9129 T Consensus 500 ~~~~~~gi~p~ll~lL~-s~~~~lr~~a~~i~a~i~~~d~~-----~q~~l~~~~~l~~ll~~L~~~~~~~~~r~~a~~~ 573 (1287)
9130 T 5WBJ_A 500 DLALSVGIFPYVLKLLQ-TTTNELRQILVFIWTKILALDKS-----CQIDLVKDGGHTYFIRFLDSSGAFPEQRAMAAFV 573 (1287)
9131 T ss_dssp HHHHHHTCHHHHHHGGG-CCCHHHHHHHHHHHHHHHHHCGG-----GHHHHHHTTCHHHHHHHHHCSSCCHHHHHHHHHH
9132 T ss_pred HHHHHCCcHHHHHHHHc-CCCHHHHHHHHHHHHHHHccCHH-----HHHHHHHcCCeeeEEEeecCCCCCHHHHHHHHHH
9133 Confidence 33457789999999998 47788899999999999876443 344556677888899988743 35567788999
9134
9135
9136 Q NP_000290.2 619 LSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTG-NTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS 695 (747)
9137 Q Consensus 619 LsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~-~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~ 695 (747)
9138 |+.++.. ... ..+...+++..+...|..... ....++.++..++.+|..|+...+.........+++..|+.+|.+.
9139 T Consensus 574 Ls~l~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~~lr~~a~~~L~~L~~~~~~~~~~~~~~~~~~~L~~lL~~~ 653 (1287)
9140 T 5WBJ_A 574 LAVIVDGHRRGQEACLEANLIGVCLGHLEASRPSDPQPEPLFLQWLCLCLGKLWEDFMEAQIMGREANAFEKLAPLLSEP 653 (1287)
9141 T ss_dssp HHHHHTTCHHHHHHHHHTTHHHHHHHHCC---------CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHGGGGGCS
9142 T ss_pred HHHHHcCCHhHHHHHHHCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHcCHHHHHHHHhcCC
9143 Confidence 9999876 222 233444677777777761000 0003678899999999999877555555556667788899999877
9144
9145
9146 Q NP_000290.2 696 ASPKAAEAARLLLSDMWSSK 715 (747)
9147 Q Consensus 696 ~d~eVr~aAL~aLsnL~~~~ 715 (747)
9148 ++.++.+++.+|+.++...
9149 T Consensus 654 -~~~VRaaal~aL~~li~~~ 672 (1287)
9150 T 5WBJ_A 654 -QPEVRAAAVFALGTLLDIG 672 (1287)
9151 T ss_dssp -CHHHHHHHHHHHHHTCC--
9152 T ss_pred -CHHHHHHHHHHHHHHHhcC
9153 Confidence 8899999999999998764
9154
9155
9156 No 205
9157 >5Z8H_A Adenomatous polyposis coli protein, Peptide; APC, inhibitor, PROTEIN BINDING-INHIBITOR complex; HET: PHQ, GOL; 1.79A {Homo sapiens}
9158 Probab=95.74 E-value=7.4e-05 Score=71.65 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=76.4 Template_Neff=12.500
9159
9160 Q NP_000290.2 246 TIPKAVQYLSSQD----EKYQAIGAYYIQHTCF---QDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS 318 (747)
9161 Q Consensus 246 iL~~Ll~lL~ssd----~eVr~sAL~aLsnLs~---~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~ 318 (747)
9162 +++.+..++...+ ..++..++.++.++.. ........+...++++.+..++...++.++..++.++.+++...
9163 T Consensus 210 ~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~L~~l~~~~ 289 (339)
9164 T 5Z8H_A 210 ALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARN 289 (339)
9165 T ss_pred hHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhhccCHHHHHHHHHCCHHHHHHHHHhCCCHHHHHHHHHHHHHHhCCC
9166 Confidence 4445555554332 5677778888887752 22223333334467777788787777788889999999988744
9167
9168
9169 Q NP_000290.2 319 TTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD 361 (747)
9170 Q Consensus 319 ~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~ 361 (747)
9171 +.....+...++++.+..++. ..++.++..++.++.+++...
9172 T Consensus 290 ~~~~~~~~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~ 331 (339)
9173 T 5Z8H_A 290 PKDQEALWDMGAVSMLKNLIH-SKHKMIAMGSAAALRNLMANR 331 (339)
9174 T ss_pred HHHHHHHHHCCcHHHHHHHhh-CCCHHHHHHHHHHHHHHHcCC
9175 Confidence 443344444567788888886 556778888999998888643
9176
9177
9178 No 206
9179 >5WBK_A Regulatory-associated protein of TOR 1,Ribosomal; Raptor, TOS, PROTEIN BINDING; 3.11A {Arabidopsis thaliana}
9180 Probab=95.72 E-value=9.2e-05 Score=89.00 Aligned_cols=168 Identities=12% Similarity=0.072 Sum_probs=120.7 Template_Neff=8.700
9181
9182 Q NP_000290.2 541 GWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG--NSDVVRSGASL 618 (747)
9183 Q Consensus 541 ~~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~--d~eVr~~AL~a 618 (747)
9184 ..+...|+++.|+++|. +..++++..++.++.+++..++. .+..+.+.+++..|+.+|... .+.++..++.+
9185 T Consensus 500 ~~~l~~Gi~p~ll~lL~-s~~~~lr~~a~~i~a~i~~~d~~-----~q~~l~~~~~l~~ll~~L~~~~~~~~~r~~a~~~ 573 (1287)
9186 T 5WBK_A 500 DLALSVGIFPYVLKLLQ-TTTNELRQILVFIWTKILALDKS-----CQIDLVKDGGHTYFIRFLDSSGAFPEQRAMAAFV 573 (1287)
9187 T ss_dssp HHHHHHTCHHHHHHGGG-CCCHHHHHHHHHHHHHHHHHCGG-----GHHHHHHTTTHHHHHHHHHSSCCCHHHHHHHHHH
9188 T ss_pred HHHHHCCcHHHHHHHHc-CCCHHHHHHHHHHHHHHHccCHH-----HHHHHHHcCCeeeEEEeecCCCCCHHHHHHHHHH
9189 Confidence 33457789999999998 46778899999999999876443 344456677888899988743 35567788899
9190
9191
9192 Q NP_000290.2 619 LSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTG-NTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS 695 (747)
9193 Q Consensus 619 LsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~-~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~ 695 (747)
9194 |+.++.. ... ..+...+++..+...|..... ....++.++..++.+|+.|+...+.........+++..|+.+|.+.
9195 T Consensus 574 Ls~l~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~~lr~~a~~~L~~L~~~~~~~~~~~~~~~~~~~L~~lL~~~ 653 (1287)
9196 T 5WBK_A 574 LAVIVDGHRRGQEACLEANLIGVCLGHLEASRPSDPQPEPLFLQWLCLCLGKLWEDFMEAQIMGREANAFEKLAPLLSEP 653 (1287)
9197 T ss_dssp HHHHHTTCHHHHHHHHHTTHHHHHHHHCC---------CHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHGGGGGCS
9198 T ss_pred HHHHHcCCHhHHHHHHHCcHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHCCHHHHHHHHhcCC
9199 Confidence 9999876 222 233444677777777761000 0003678899999999999876555555556667788899999877
9200
9201
9202 Q NP_000290.2 696 ASPKAAEAARLLLSDMWSSK 715 (747)
9203 Q Consensus 696 ~d~eVr~aAL~aLsnL~~~~ 715 (747)
9204 ++.+|.+++.+|+.++...
9205 T Consensus 654 -~~~VRaaal~AL~~li~~~ 672 (1287)
9206 T 5WBK_A 654 -QPEVRAAAVFALGTLLDIG 672 (1287)
9207 T ss_dssp -CHHHHHHHHHHHHHHCC--
9208 T ss_pred -CHHHHHHHHHHHHHHHhcC
9209 Confidence 8899999999999998764
9210
9211
9212 No 207
9213 >6SA6_A DARPin-Armadillo fusion A5; protein fusion, DARPin, Armadillo, shared; HET: EDO; 1.6A {synthetic construct}
9214 Probab=95.69 E-value=8.4e-05 Score=73.16 Aligned_cols=135 Identities=25% Similarity=0.260 Sum_probs=92.1 Template_Neff=12.400
9215
9216 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
9217 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
9218 .+++.+..++.+.++.++..++.+|.+++.........+...++++.+..++...++.++..++.+|..++.........
9219 T Consensus 241 ~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 320 (397)
9220 T 6SA6_A 241 GALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQA 320 (397)
9221 T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHH
9222 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHhcCcHHHHHHHHhCChHHHHHHHhcCCcHHHHHHHHHHHHHHhcCcHHHHHH
9223 Confidence 34566666777777888889999999987654333333444467777888887777788888899998887654433333
9224
9225
9226 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVI 380 (747)
9227 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~ 380 (747)
9228 +...++++.+..++. ..++.++..++.++..++.. ......+.. ++++.|..++.
9229 T Consensus 321 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 377 (397)
9230 T 6SA6_A 321 VIDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGNEQKQAVKEAGALEKLEQLQS 377 (397)
9231 T ss_dssp HHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT
9232 T ss_pred HHhcChHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCchHHHHHHHh
9233 Confidence 444567777888776 55678888899999998874 333333333 67777777664
9234
9235
9236 No 208
9237 >2W3C_A GENERAL VESICULAR TRANSPORT FACTOR P115; MEMBRANE VESICLE TETHERING, ARMADILLO FOLD; HET: PEG; 2.22A {HOMO SAPIENS}
9238 Probab=95.59 E-value=0.00012 Score=79.14 Aligned_cols=136 Identities=15% Similarity=0.146 Sum_probs=91.0 Template_Neff=10.400
9239
9240 Q NP_000290.2 246 TIPKAVQYLSSQ--DEKYQAIGAYYIQHTCFQDES-----------------AKQQVY-QLGGICKLVDLLRSPNQNVQQ 305 (747)
9241 Q Consensus 246 iL~~Ll~lL~ss--d~eVr~sAL~aLsnLs~~~~~-----------------~~~~li-~~~IL~~Ll~lL~s~d~eVr~ 305 (747)
9242 .++.++..+.+. +..+...++.+|..++..... ....+. ..+.++.++.++.+.+..++.
9243 T Consensus 9 ~l~~Li~~L~~~~~~~~~~~~al~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~ 88 (577)
9244 T 2W3C_A 9 AMEHLIHVLQTDRSDSEIIGYALDTLYNIISNEEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFHVRW 88 (577)
9245 T ss_dssp TTHHHHHHHHHCTTCHHHHHHHHHHHHHHHHC------------------CHHHHHHHHSTHHHHHHHHHTTCCCHHHHH
9246 T ss_pred hHHHHHHHHhhCCCcHHHHHHHHHHHHHHhCCCchhhhhhccccccHHHHHHHHHHHHhcCchHHHHHHHccCCCHHHHH
9247 Confidence 345566666543 456778888888888765431 122233 456777788888777788899
9248
9249
9250 Q NP_000290.2 306 AAAGALRNLVFRST-TNKLETR-RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTD-ELKEELIA-DALPVLADRVII 381 (747)
9251 Q Consensus 306 ~AL~aLs~La~~~~-~~~~~ll-~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~-~~~~~Lve-giLe~Lv~LL~~ 381 (747)
9252 .++.+|..++...+ .....+. ..+.++.++.++. ..+..++..++.+|.+++... .....+.. ++++.|+.++..
9253 T Consensus 89 ~a~~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~~~~L~~ll~~ 167 (577)
9254 T 2W3C_A 89 PGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLA-DSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIISE 167 (577)
9255 T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGG-CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHH
9256 T ss_pred HHHHHHHHHHHhchHHHHHHHHhCCChHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHcCCHHHHHHHHHHH
9257 Confidence 99999999886543 2222333 2467888888886 556788999999999998743 33333333 889999988875
9258
9259
9260 Q NP_000290.2 382 P 382 (747)
9261 Q Consensus 382 ~ 382 (747)
9262 .
9263 T Consensus 168 ~ 168 (577)
9264 T 2W3C_A 168 E 168 (577)
9265 T ss_dssp T
9266 T ss_pred h
9267 Confidence 3
9268
9269
9270 No 209
9271 >6CRI_I Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
9272 Probab=95.58 E-value=0.0001 Score=74.75 Aligned_cols=106 Identities=11% Similarity=0.025 Sum_probs=69.8 Template_Neff=13.200
9273
9274 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
9275 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
9276 ..+++.+...+.+.+..++..++.++..+.... ....+++.+...+.+.++.++..++.++..+.........
9277 T Consensus 72 ~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~-------~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~~~~~ 144 (570)
9278 T 6CRI_I 72 IMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDK-------ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVE 144 (570)
9279 T ss_dssp GTTHHHHHHHTSSSCHHHHHHHHHHHHHCCCTT-------TTTTSHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCHHHHH
9280 T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHccCChhH-------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhChhhhh
9281 Confidence 344555666666677778888888887775321 1123556666667777788888899988888754332211
9282
9283
9284 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
9285 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
9286 ...+++.+...+. +.++.++..++.++..+...
9287 T Consensus 145 ---~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~ 177 (570)
9288 T 6CRI_I 145 ---DQGFLDTLKDLIS-DSNPMVVANAVAALSEIAES 177 (570)
9289 T ss_dssp ---HHTHHHHHHHHHT-SSSHHHHHHHHHHHHHHHHH
9290 T ss_pred ---ccchHHHHHHHhc-CCCHHHHHHHHHHHHHHHhh
9291 Confidence 1345666677776 56778888899888888764
9292
9293
9294 No 210
9295 >1QBK_B STRUCTURE OF THE KARYOPHERIN BETA2-RAN; HEAT REPEATS, NUCLEAR TRANSPORT PROTEIN; HET: GNP; 3.0A {Homo sapiens} SCOP: a.118.1.1
9296 Probab=95.57 E-value=0.00011 Score=79.31 Aligned_cols=157 Identities=12% Similarity=0.081 Sum_probs=97.3 Template_Neff=13.200
9297
9298 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
9299 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
9300 ..++.+...+. +.++.++..++.+|..++...+. ....+ -..+++.+...+.+.+..++..++.++..++...
9301 T Consensus 667 ~~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~ 739 (890)
9302 T 1QBK_B 667 NILTLMYQCMQ-DKMPEVRQSSFALLGDLTKACFQ-----HVKPC-IADFMPILGTNLNPEFISVCNNATWAIGEISIQM 739 (890)
9303 T ss_pred hHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHhHH-----hHHHH-HHHHHHHHHhhcCcccHHHHHHHHHHHHHHHHHc
9304 Confidence 35566666666 36778888899999988764321 11111 1346667777777777889999999999988652
9305
9306
9307 Q NP_000290.2 627 -LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
9308 Q Consensus 627 -e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
9309 .........+++.+...+.+. ..+..++..++.+|+.++...+....... ..++..++..+....++.++..++
9310 T Consensus 740 ~~~~~~~~~~i~~~l~~~l~~~----~~~~~~r~~a~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~ 814 (890)
9311 T 1QBK_B 740 GIEMQPYIPMVLHQLVEIINRP----NTPKTLLENTAITIGRLGYVCPQEVAPML-QQFIRPWCTSLRNIRDNEEKDSAF 814 (890)
9312 T ss_pred CccccchHHHHHHHHHHHHcCC----CCCccHHHHHHHHHHHHHhhCHHhHHHHH-HHhHHHHHHHHhcCCChHHHHHHH
9313 Confidence 211112234566677766541 01567888999999998875332211111 234555666555432567788888
9314
9315
9316 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
9317 Q Consensus 706 ~aLsnL~~~~ 715 (747)
9318 .+|..+....
9319 T Consensus 815 ~~l~~l~~~~ 824 (890)
9320 T 1QBK_B 815 RGICTMISVN 824 (890)
9321 T ss_pred HHHHHHHhhC
9322 Confidence 8888776543
9323
9324
9325 No 211
9326 >4P6Z_G BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
9327 Probab=95.56 E-value=0.00012 Score=77.66 Aligned_cols=151 Identities=10% Similarity=0.027 Sum_probs=89.9 Template_Neff=12.000
9328
9329 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ---SGNSDVVRSGASLLSNMS 623 (747)
9330 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~---s~d~eVr~~AL~aLsnLa 623 (747)
9331 ..++.|+.++. +.++.++..++.+|..+....+. ....+++.+...+. ..+..++ .++++|+.+.
9332 T Consensus 431 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~~~~l~~~l~~~~~~~~~~r-~a~~~l~~~~ 498 (627)
9333 T 4P6Z_G 431 WHIDTIMRVLT-TAGSYVRDDAVPNLIQLITNSVE----------MHAYTVQRLYKAILGDYSQQPLVQ-VAAWCIGEYG 498 (627)
9334 T ss_dssp HHHHHHHHHHH-HTGGGSCGGGHHHHHHHHHSCTT----------TTHHHHHHHHHHHHHCCCSHHHHH-HHHHHHHHTH
9335 T ss_pred HHHHHHHHHHH-hhccccCcchHHHHHHHHhcCch----------HHHHHHHHHHHHHHcCCCCHHHHH-HHHHHHHHHH
9336 Confidence 35566666665 35566677777777776643211 01234455555553 2334555 7778887776
9337
9338
9339 Q NP_000290.2 624 RHPLL-H-------RVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR 693 (747)
9340 Q Consensus 624 ~~~e~-~-------~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~ 693 (747)
9341 ..... . ......+++.|..++ .+ .++.++..++.+|..+....+. ....++..|..++.
9342 T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~------~~~~vr~~a~~~L~~l~~~~~~-----~~~~~~~~l~~~~~ 567 (627)
9343 T 4P6Z_G 499 DLLVSGQCEEEEPIQVTEDEVLDILESVLISNM------STSVTRGYALTAIMKLSTRFTC-----TVNRIKKVVSIYGS 567 (627)
9344 T ss_dssp HHHHSCCCTTSCCCCCCSHHHHHHHHHHHHCTT------CCHHHHHHHHHHHHHHHHHCCS-----CHHHHHHHHHHGGG
9345 T ss_pred HHhccCCCCCCCCCCCCHHHHHHHHHHHHcccC------CCHHHHHHHHHHHHHHHhhccc-----hHHHHHHHHHHHcc
9346 Confidence 54111 0 011124566666666 33 3567889999999998865332 22234566666666
9347
9348
9349 Q NP_000290.2 694 SSASPKAAEAARLLLSDMWSSKELQGVL 721 (747)
9350 Q Consensus 694 s~~d~eVr~aAL~aLsnL~~~~~~~~~~ 721 (747)
9351 +. +..++..++.++..+..+......|
9352 T Consensus 568 ~~-~~~vr~~a~~~l~~l~~~~~~~~~l 594 (627)
9353 T 4P6Z_G 568 SI-DVELQQRAVEYNALFKKYDHMRSAL 594 (627)
9354 T ss_dssp CS-CHHHHHHHHHHHHHHHHCTTHHHHH
9355 T ss_pred CC-CHHHHHHHHHHHHHhhhHHHHHHHH
9356 Confidence 65 7889999999999988764444443
9357
9358
9359 No 212
9360 >5MFI_B YIII(Dq.V2)4CqI, (KR)4; Designed armadillo repeat protein, peptide; 1.45A {synthetic construct}
9361 Probab=95.46 E-value=0.00014 Score=65.05 Aligned_cols=112 Identities=20% Similarity=0.227 Sum_probs=75.6 Template_Neff=13.000
9362
9363 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9364 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9365 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
9366 T Consensus 131 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 210 (243)
9367 T 5MFI_B 131 ALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 210 (243)
9368 T ss_dssp CHHHHHHTTTSSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSCHHHHHHH
9369 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
9370 Confidence 45556666666667788888889888876544333333444577778888877778888899999998886444333333
9371
9372
9373 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
9374 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
9375 ...++++.+..++. ..++.++..++.++..++
9376 T Consensus 211 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 242 (243)
9377 T 5MFI_B 211 EEAGAEPALEKLQS-SPNEEVQKNAQAALEALN 242 (243)
9378 T ss_dssp HHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHC
9379 T ss_pred HHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHhc
9380 Confidence 33456667777775 456677777777777654
9381
9382
9383 No 213
9384 >5MFJ_B YIII(Dq.V2)4CqI, (KR)5; Designed armadillo repeat protein, peptide; 1.53A {synthetic construct}
9385 Probab=95.46 E-value=0.00014 Score=65.05 Aligned_cols=112 Identities=20% Similarity=0.227 Sum_probs=75.6 Template_Neff=13.000
9386
9387 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9388 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9389 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.+..++..++.++..++...+.....+
9390 T Consensus 131 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 210 (243)
9391 T 5MFJ_B 131 ALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKL 210 (243)
9392 T ss_dssp CHHHHHHTTTSSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHTSCHHHHHHH
9393 T ss_pred cHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHH
9394 Confidence 45556666666667788888889888876544333333444577778888877778888899999998886444333333
9395
9396
9397 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
9398 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
9399 ...++++.+..++. ..++.++..++.++..++
9400 T Consensus 211 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 242 (243)
9401 T 5MFJ_B 211 EEAGAEPALEKLQS-SPNEEVQKNAQAALEALN 242 (243)
9402 T ss_dssp HHTTHHHHHHHTSS-CSCHHHHHHHHHHHHHHC
9403 T ss_pred HHCCcHHHHHHHhc-CCCHHHHHHHHHHHHHhc
9404 Confidence 33456667777775 456677777777777654
9405
9406
9407 No 214
9408 >5EWP_B Uncharacterized protein; translocation and attachment of rhoptries; 1.8A {Plasmodium falciparum Santa Lucia}
9409 Probab=95.43 E-value=0.00015 Score=67.32 Aligned_cols=134 Identities=16% Similarity=0.127 Sum_probs=89.1 Template_Neff=11.800
9410
9411 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9412 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9413 +++.+..++...+..++..++.++.+++.........+...+.++.++.++...+..++..++.++.+++.........+
9414 T Consensus 87 ~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~ 166 (252)
9415 T 5EWP_B 87 GIAVFINLLKSHELDRVHAAVVALSFLSVDNVKNCICMFESGALPYLISGMKSNIDGMKAACAQTCRNIFVLDKKYKKEF 166 (252)
9416 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHH
9417 T ss_pred cHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHhhCCCHHHHHHHHHHHHHHHhcCHHHHHHH
9418 Confidence 45556666666667788889999999887544444445555677888888877677888999999999876533333344
9419
9420
9421 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNA-------EIQKQLTGLLWNLSSTDEL-----KEELIA-DALPVLADRVI 380 (747)
9422 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~-------eVr~~AL~aLsnLas~~~~-----~~~Lve-giLe~Lv~LL~ 380 (747)
9423 ...+.++.+..++. .... .++..++.++..++..... ...+.. ++++.|..++.
9424 T Consensus 167 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~L~~~l~ 233 (252)
9425 T 5EWP_B 167 LKLGGITQLVNLLE-LPSNYDDSQPLYTQLEAIYHLEDFILNDGDEIPEFLEAVKNSNSIKNLKTLQQ 233 (252)
9426 T ss_dssp HHTTHHHHHHHTTS-CCTTCCSCSCCHHHHHHHHHHHHHHEETTEECHHHHHHHHTTTHHHHHHHHTT
9427 T ss_pred HHCChHHHHHHHhc-CCCCCCCCchHHHHHHHHHHHHHHHhcCCCccHHHHHHHHhCChHHHHHHHhh
9428 Confidence 44567777777775 3333 2777788888888764331 223333 66777777663
9429
9430
9431 No 215
9432 >4V3Q_A YIII_M4_AII; DE NOVO PROTEIN, PROTEIN ENGINEERING; HET: GOL, CA; 1.8A {SYNTHETIC CONSTRUCT}
9433 Probab=95.36 E-value=0.00017 Score=64.82 Aligned_cols=134 Identities=25% Similarity=0.303 Sum_probs=88.0 Template_Neff=12.900
9434
9435 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9436 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9437 +++.+...+.+.+..++..++.++..++...+.....+...++++.+...+.+.+..++..++.++..++.........+
9438 T Consensus 51 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 130 (247)
9439 T 4V3Q_A 51 ALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGDEQIQAV 130 (247)
9440 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
9441 T ss_pred cHHHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
9442 Confidence 45556666766677888889999998876544333334445677788888877778888889999988875443333333
9443
9444
9445 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELIA-DALPVLADRVI 380 (747)
9446 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~-~~~~Lve-giLe~Lv~LL~ 380 (747)
9447 ...++++.+...+. ..++.++..++.++..++.... ....+.. ++++.+..++.
9448 T Consensus 131 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 186 (247)
9449 T 4V3Q_A 131 IDAGALPALVQLLS-SPNEQILQEALWTLGNIASGGDEQIQAVIDAGALPALVQLLS 186 (247)
9450 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
9451 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhc
9452 Confidence 34466777777776 4566778888888888876432 2222222 55666665554
9453
9454
9455 No 216
9456 >3GQ2_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.18A {Bos taurus}
9457 Probab=95.28 E-value=0.00022 Score=78.31 Aligned_cols=135 Identities=13% Similarity=0.116 Sum_probs=92.0 Template_Neff=10.100
9458
9459 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQ-QVY-QLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
9460 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~-~li-~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
9461 .++.++.++...+..++..++.+|..++...+.... .+. ..+.++.++.++.+.+..++..++.+|..++........
9462 T Consensus 123 ~i~~Ll~ll~~~~~~~~~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~~~~~~i~~~a~~~L~~l~~~~~~~~~ 202 (651)
9463 T 3GQ2_A 123 NVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQK 202 (651)
9464 T ss_dssp HHHTHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHGGGGGCSSHHHHHHHHHHHHHHHTTCHHHHH
9465 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHH
9466 Confidence 455566666666778889999999998865432221 222 345778888888877778889999999999874444434
9467
9468
9469 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGN----AEIQKQLTGLLWNLSSTDELKEE-LIA-DALPVLADRVII 381 (747)
9470 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d----~eVr~~AL~aLsnLas~~~~~~~-Lve-giLe~Lv~LL~~ 381 (747)
9471 .+...+.++.++.++. ... ..++..++.+|.+++........ +.+ ++++.|+.+|..
9472 T Consensus 203 ~l~~~g~~~~L~~ll~-~~~~~~~~~v~~~al~~L~~L~~~~~~~~~~~~e~~~i~~L~~lL~~ 265 (651)
9473 T 3GQ2_A 203 IVAFENAFERLLDIIT-EEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEV 265 (651)
9474 T ss_dssp HHHHTTHHHHHHHHHH-HTTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGTGGGGCC
9475 T ss_pred HHHhCChHHHHHHHHH-HhCCCCccHHHHHHHHHHHHHHhCCHHHHHHHHhcChHHHHHHHHhc
9476 Confidence 4445577888888876 322 25777888899998875433333 334 788888888864
9477
9478
9479 No 217
9480 >3GRL_A General vesicular transport factor p115; vesicle transport, membrane trafficking, membrane; 2.0A {Bos taurus}
9481 Probab=95.28 E-value=0.00022 Score=78.31 Aligned_cols=135 Identities=13% Similarity=0.116 Sum_probs=92.0 Template_Neff=10.100
9482
9483 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQ-QVY-QLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
9484 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~-~li-~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
9485 .++.++.++...+..++..++.+|..++...+.... .+. ..+.++.++.++.+.+..++..++.+|..++........
9486 T Consensus 123 ~i~~Ll~ll~~~~~~~~~~al~~L~~l~~~~~~~~~~~i~~~~~~i~~Lv~lL~~~~~~i~~~a~~~L~~l~~~~~~~~~ 202 (651)
9487 T 3GRL_A 123 NVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQK 202 (651)
9488 T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHH
9489 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHHHhccHHHHHHHHhCccHHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHH
9490 Confidence 455566666666778889999999998865432221 222 345778888888877778889999999999874444434
9491
9492
9493 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGN----AEIQKQLTGLLWNLSSTDELKEE-LIA-DALPVLADRVII 381 (747)
9494 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d----~eVr~~AL~aLsnLas~~~~~~~-Lve-giLe~Lv~LL~~ 381 (747)
9495 .+...+.++.++.++. ... ..++..++.+|.+++........ +.+ ++++.|+.+|..
9496 T Consensus 203 ~l~~~g~~~~L~~ll~-~~~~~~~~~v~~~al~~L~~L~~~~~~~~~~~~e~~~i~~L~~lL~~ 265 (651)
9497 T 3GRL_A 203 IVAFENAFERLLDIIT-EEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEV 265 (651)
9498 T ss_dssp HHHHTTHHHHHHHHHH-HHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGGCC
9499 T ss_pred HHHhCChHHHHHHHHH-HhCCCCccHHHHHHHHHHHHHHhCCHHHHHHHHhcChHHHHHHHHhc
9500 Confidence 4445577888888876 322 25777888899998875433333 334 788888888864
9501
9502
9503 No 218
9504 >5AFF_A SYMPORTIN 1, RIBOSOMAL PROTEIN L5; CHAPERONE, RIBOSOME BIOGENESIS, ALPHA SOLENOID.; 3.398A {CHAETOMIUM THERMOPHILUM}
9505 Probab=95.22 E-value=0.00026 Score=78.85 Aligned_cols=94 Identities=14% Similarity=0.083 Sum_probs=66.2 Template_Neff=8.800
9506
9507 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLV-DLLRSPNQNVQQAAAGALRNLVFRS-TTNK 322 (747)
9508 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll-~lL~s~d~eVr~~AL~aLs~La~~~-~~~~ 322 (747)
9509 ..++.|+..+.+.++..+..++.+|.+++.. +.....+...++++.|+ .++.+.+..++..++.+|.+++... ....
9510 T Consensus 12 ~~i~~Li~~L~s~~~~~r~~A~~aL~~L~~d-~~~r~~ll~~g~v~~Li~~lL~d~~~~v~~~a~~aLrnLs~~~~~~~~ 90 (654)
9511 T 5AFF_A 12 DKILPVLKDLKSPDAKSRTTAAGAIANIVQD-AKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFC 90 (654)
9512 T ss_dssp HHHHHHHHHHHSSCTTHHHHHHHHHHHHHCC-HHHHHHHHHTTHHHHHHHTGGGCSSHHHHHHHHHHHHHHHHHSCHHHH
9513 T ss_pred CchHHHHHHcCCCCHHHHHHHHHHHHHHHcC-HHHHHHHHHCChHHHHHHHHccCCCHHHHHHHHHHHHHHhccCchhHH
9514 Confidence 3456677777777888899999999998754 44444555567888887 7787777889999999999997643 2222
9515
9516
9517 Q NP_000290.2 323 LETRRQNGIREAVSLLR 339 (747)
9518 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ 339 (747)
9519 ..++..+++..|..++.
9520 T Consensus 91 ~~l~~~~il~~L~~lL~ 107 (654)
9521 T 5AFF_A 91 VHLYRLDVLTAIEHAAK 107 (654)
9522 T ss_dssp HHHHHTTHHHHHHHHHH
9523 T ss_pred HHHHHCChHHHHHHHHH
9524 Confidence 33444566666666654
9525
9526
9527 No 219
9528 >6QH5_B AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
9529 Probab=95.19 E-value=0.00023 Score=72.97 Aligned_cols=107 Identities=12% Similarity=0.043 Sum_probs=72.0 Template_Neff=12.900
9530
9531 Q NP_000290.2 243 SGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNK 322 (747)
9532 Q Consensus 243 ~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~ 322 (747)
9533 ...+++.+...+.+.++.++..++.++..+.... ....+++.+...+.+.++.++..++.++..+....+...
9534 T Consensus 84 ~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~-------~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~ 156 (592)
9535 T 6QH5_B 84 AIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDK-------ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156 (592)
9536 T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHcchh-------hHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCchhh
9537 Confidence 4445666666777777888888888888775421 112355666666777778889999999888875433211
9538
9539
9540 Q NP_000290.2 323 LETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
9541 Q Consensus 323 ~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
9542 ....+++.+...+. +.++.++..++.++..+...
9543 T Consensus 157 ---~~~~~~~~l~~~l~-d~~~~vr~~a~~~l~~~~~~ 190 (592)
9544 T 6QH5_B 157 ---EDQGFLDSLRDLIA-DSNPMVVANAVAALSEISES 190 (592)
9545 T ss_pred ---cCccHHHHHHHHhC-CCCHHHHHHHHHHHHHHHhc
9546 Confidence 11245666666675 55678888899988888764
9547
9548
9549 No 220
9550 >3C2G_A Sys-1 protein, Pop-1 8-residue peptide; beta-catenin, phylogeny, SYS-1, POP-1, Caenorhabditis; HET: MSE; 2.5A {Caenorhabditis elegans}
9551 Probab=95.17 E-value=0.00033 Score=77.69 Aligned_cols=189 Identities=17% Similarity=0.156 Sum_probs=108.5 Template_Neff=5.600
9552
9553 Q NP_000290.2 260 KYQAIGAYYIQHTCFQDESAKQQVYQL-GG----------ICKLVDLLRSP----------------N----QNVQQAAA 308 (747)
9554 Q Consensus 260 eVr~sAL~aLsnLs~~~~~~~~~li~~-~I----------L~~Ll~lL~s~----------------d----~eVr~~AL 308 (747)
9555 .+...++.++..++..+......+... +. +..|+.++... + +.+...+.
9556 T Consensus 185 ~~~~~i~d~Lr~L~~~n~~~K~~~l~~~g~~~~~~~~~~~I~~Ll~IL~~~~~~~~~~~~e~~~~~~~~~~~e~ll~~t~ 264 (619)
9557 T 3C2G_A 185 MINPAIFIIFRFIISKDTRLKDYFIWNNNPHDQPPPPTGLIIKLNAVMIGSYRLIAGQNPETLPQNPELAHLIQVIIRTF 264 (619)
9558 T ss_dssp GCCTHHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCCTTSHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHH
9559 T ss_pred chHHHHHHHHHHHhcCCHHHHHHHHhcCCCCCCCCCCchHHHHHHHHHHHhHhhhcCCCcccCCCCccHHHHHHHHHHHH
9560 Confidence 344556667777766544443333332 23 56676666531 1 44555666
9561
9562
9563 Q NP_000290.2 309 GALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCD 388 (747)
9564 Q Consensus 309 ~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~~~~~~~ 388 (747)
9565 .+|..+. ........+...+.++.|...+. ..++.+...++++|.++.........-+++.+..++.+|..
9566 T Consensus 265 ~lLk~Ls-~~sn~a~~~V~~gGvq~L~~~L~-~~S~rlv~~~L~~LrnlSDa~~~~~~~l~~ll~~lv~ll~~------- 335 (619)
9567 T 3C2G_A 265 DLLGLLL-HDSDAIDGFVRSDGVGAITTVVQ-YPNNDLIRAGCKLLLQVSDAKALAKTPLENILPFLLRLIEI------- 335 (619)
9568 T ss_dssp HHHHHHC-CSHHHHHHHHHTTHHHHHHHHTT-SSCHHHHHHHHHHHHHHTTCGGGGTSCCTTHHHHHHHHHHH-------
9569 T ss_pred HHHHHHh-CCcchHHHHHHCCHHHHHHHHcc-CCCHHHHHHHHHHHHHHHchHHHcCCchHHHHHHHHHHHhc-------
9570 Confidence 7777666 33333345666788888888886 67788999999999999865432212223566667776621
9571
9572
9573 Q NP_000290.2 389 GNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAA---- 464 (747)
9574 Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 464 (747)
9575 .-|+.+..-+||+|..-. ....--+.+---.|-|+.|+.-+..+...
9576 T Consensus 336 --------~~D~~iv~~~tG~LsNlt---------------------~nn~~NK~~~i~~ggi~~Li~~i~~~~~~~~~~ 386 (619)
9577 T 3C2G_A 336 --------HPDDEVIYSGTGFLSNVV---------------------AHKQHVKDIAIRSNAIFLLHTIISKYPRLDELT 386 (619)
9578 T ss_dssp --------CCCHHHHHHHHHHHHHHS---------------------TTCHHHHHHHHHTTHHHHHHHHHHTSCCGGGCC
9579 T ss_pred --------CCCHHHHHHHHHHHHHHH---------------------cCChhHHHHHHhCCHHHHHHHHHHhCCccccCC
9580 Confidence 237888888898875311 11111111111234445555444333210
9581
9582
9583 Q NP_000290.2 465 ----SRCDDKSVENCMCVLHNLSYRL 486 (747)
9584 Q Consensus 465 ----~~~~~~~~~~~~~~~~~~~~~~ 486 (747)
9585 -+-...-.|||.|.|+||..+-
9586 T Consensus 387 ~~~~~~~~eeI~e~~l~aLr~Lt~~h 412 (619)
9587 T 3C2G_A 387 DAPKRNRVCEIICNCLRTLNNFLMMW 412 (619)
9588 T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHGGG
9589 T ss_pred CCchhhhhHHHHHHHHHHHHHHhccC
9590 Confidence 0011345899999999998874
9591
9592
9593 No 221
9594 >4FDD_A Transportin-1, RNA-binding protein FUS; HEAT repeats, Karyopherin, nuclear import; 2.3A {Homo sapiens}
9595 Probab=95.09 E-value=0.00028 Score=75.31 Aligned_cols=157 Identities=12% Similarity=0.083 Sum_probs=93.3 Template_Neff=13.300
9596
9597 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
9598 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
9599 ..++.+...+. +.++.++..++.++..++...+. ..... -..+++.+...+.+.+..++..++.++..++..
9600 T Consensus 629 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~ 701 (852)
9601 T 4FDD_A 629 NILTLMYQCMQ-DKMPEVRQSSFALLGDLTKACFQ-----HVKPC-IADFMPILGTNLNPEFISVCNNATWAIGEISIQM 701 (852)
9602 T ss_dssp CHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHCGG-----GTGGG-HHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHH
9603 T ss_pred hHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHH-----hHHHH-HHHHHHHHHhhCCcccHHHHHHHHHHHHHHHHHc
9604 Confidence 35566666666 35677888899999988764321 11111 134666677777777788888999999888765
9605
9606
9607 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
9608 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
9609 ..........+++.+...+... ..+..++..++.+|..+....+....... ..++..++..+....+..++..++
9610 T Consensus 702 ~~~~~~~~~~i~~~l~~~l~~~----~~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~a~ 776 (852)
9611 T 4FDD_A 702 GIEMQPYIPMVLHQLVEIINRP----NTPKTLLENTAITIGRLGYVCPQEVAPML-QQFIRPWCTSLRNIRDNEEKDSAF 776 (852)
9612 T ss_dssp GGGGGGGTHHHHHHHHHHHTCS----SCCHHHHHHHHHHHHHHHHHCHHHHGGGH-HHHHHHHHHHHHTSCSSHHHHHHH
9613 T ss_pred CccchhhHHHHHHHHHHHHcCC----CCChhHHHHHHHHHHHHHHHCHHHhHHHH-HHhHHHHHHHhhcCCCHHHHHHHH
9614 Confidence 2111111123556666666541 01467788888999888765332111111 124445555554322567788888
9615
9616
9617 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
9618 Q Consensus 706 ~aLsnL~~~~ 715 (747)
9619 .+|..++...
9620 T Consensus 777 ~~l~~l~~~~ 786 (852)
9621 T 4FDD_A 777 RGICTMISVN 786 (852)
9622 T ss_dssp HHHHHHHHHC
9623 T ss_pred HHHHHHHhhC
9624 Confidence 8887776543
9625
9626
9627 No 222
9628 >4P6Z_B BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
9629 Probab=95.03 E-value=0.00031 Score=72.53 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=69.9 Template_Neff=12.700
9630
9631 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
9632 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
9633 ..+++.+...+.+.++.++..++.++..+.... ....+++.+...+.+.++.++..++.++..+....+...
9634 T Consensus 101 ~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~-------~~~~~~~~l~~~l~~~~~~vr~~a~~~L~~l~~~~~~~~- 172 (600)
9635 T 4P6Z_B 101 IMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDK-------ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV- 172 (600)
9636 T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHhcCCchH-------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhChHHh-
9637 Confidence 344555566666667788888888887775321 112455666666777778888889998888875433211
9638
9639
9640 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
9641 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
9642 ....+++.+...+. +.++.++..++.++..+...
9643 T Consensus 173 --~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 206 (600)
9644 T 4P6Z_B 173 --EDQGFLDTLKDLIS-DSNPMVVANAVAALSEIAES 206 (600)
9645 T ss_pred --hccChHHHHHHHhc-CCCHHHHHHHHHHHHHHHhh
9646 Confidence 11345666777775 55678888888888888764
9647
9648
9649 No 223
9650 >2JKT_A AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ALTERNATIVE SPLICING, PHOSPHOPROTEIN, PHOSPHORYLATION, PROTEIN; HET: SEP, SO4; 3.4A {MUS MUSCULUS}
9651 Probab=95.01 E-value=0.00032 Score=73.46 Aligned_cols=144 Identities=13% Similarity=0.048 Sum_probs=89.0 Template_Neff=12.300
9652
9653 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSD--VVRSGASLLSNMSR 624 (747)
9654 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~e--Vr~~AL~aLsnLa~ 624 (747)
9655 ..++.|+.++. +.+..++..++.++..+...... ....+++.|...+.+.+.. ++..++++|+.+..
9656 T Consensus 441 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~~~~l~~~l~~~~~~~~v~~~a~~~l~~~~~ 509 (623)
9657 T 2JKT_A 441 WYVDTILNLIR-IAGDYVSEEVWYRVIQIVINRDD----------VQGYAAKTVFEALQAPACHENLVKVGGYILGEFGN 509 (623)
9658 T ss_dssp HHHHHHHHHTT-TTGGGCCHHHHHHHHHHHHHCST----------THHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHSST
9659 T ss_pred HHHHHHHHHHH-HHcccCCHHHHHHHHHHHhcChh----------HHHHHHHHHHHHHhCccCCHHHHHHHHHHHHHHHH
9660 Confidence 35666777776 35566777788888777653211 1234566666666655544 78888888888775
9661
9662
9663 Q NP_000290.2 625 HPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC---RSSASPKA 700 (747)
9664 Q Consensus 625 ~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL---~s~~d~eV 700 (747)
9665 .... .......+++.|...+.+ .+..++..++.+|..++...+. . ...+..++..+ .+. ++.+
9666 T Consensus 510 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~al~~l~~~~~~-----~-~~~l~~ll~~l~~~~~~-~~~v 576 (623)
9667 T 2JKT_A 510 LIAGDPRSSPLIQFNLLHSKFHL------CSVPTRALLLSTYIKFVNLFPE-----V-KATIQDVLRSDSQLKNA-DVEL 576 (623)
9668 T ss_dssp TSSSSGGGCHHHHHHHHHHHHTT------SCHHHHHHHHHHHHHHHHHCTT-----T-HHHHHTTSSSHHHHTCS-SHHH
9669 T ss_pred HhcCCCCCChHHHHHHHHHhcCC------CCHHHHHHHHHHHHHHHHhCHH-----H-HHHHHHHHHhccccCCC-CHHH
9670 Confidence 4111 111111355566666655 3577889999999998864332 1 13455555555 444 7788
9671
9672
9673 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
9674 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
9675 +..++.++..+...
9676 T Consensus 577 r~~a~~~l~~~~~~ 590 (623)
9677 T 2JKT_A 577 QQRAVEYLRLSTVA 590 (623)
9678 T ss_dssp HHHHHHHHHHHHSS
9679 T ss_pred HHHHHHHHHHhccC
9680 Confidence 99999998877654
9681
9682
9683 No 224
9684 >5IZ8_A Adenomatous polyposis coli protein, ACE-ALA-GLY-GLU-ALA-LEU-ALA-ASP-NH2; APC, ASEF, Colon CANCER, Drug; HET: PGE; 3.06A {Homo sapiens}
9685 Probab=94.95 E-value=0.00036 Score=67.82 Aligned_cols=162 Identities=22% Similarity=0.254 Sum_probs=121.7 Template_Neff=12.000
9686
9687 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK-EKGLPQIARLLQSGN----SDVVRSGAS 617 (747)
9688 Q Consensus 543 lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie-~giI~~Ll~LL~s~d----~eVr~~AL~ 617 (747)
9689 +.+.++++.|+.++....++.++..++++|.+++...+. ....+.+ .++++.|+.++...+ ..++..++.
9690 T Consensus 166 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 240 (354)
9691 T 5IZ8_A 166 LREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTE-----NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGG 240 (354)
9692 T ss_dssp HHHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTSCHH-----HHHHHHTSTTHHHHHHHHTTCCCTTSCCHHHHHHHH
9693 T ss_pred HHHCCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCChH-----hHHHHHhhccHHHHHHHHHhhcCCCCcHHHHHHHHH
9694 Confidence 356778888888887225677888999999999875232 2334455 688899998887533 678888999
9695
9696
9697 Q NP_000290.2 618 LLSNMSR----HPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC 692 (747)
9698 Q Consensus 618 aLsnLa~----~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL 692 (747)
9699 +|.+++. .... ..+...++++.++.++.. .++.++..++.+|.+++...+.....+.+.++++.|+.++
9700 T Consensus 241 ~L~~l~~~~~~~~~~~~~l~~~~~~~~l~~~l~~------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l 314 (354)
9701 T 5IZ8_A 241 ILRNVSSLIATNEDHRQILRENNCLQTLLQHLKS------HSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLI 314 (354)
9702 T ss_dssp HHHHHHHHHHTCHHHHHHHHTTTHHHHHHHTTTC------SCHHHHHHHHHHHHHHSSSCHHHHHHHHTTTHHHHHHHHS
9703 T ss_pred HHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhhc------CCHHHHHHHHHHHHHHHccCHHHHHHHHhCCHHHHHHHHH
9704 Confidence 9999873 2222 233455678888888876 3677899999999999985466666677778889999988
9705
9706
9707 Q NP_000290.2 693 RSSASPKAAEAARLLLSDMWSSKE 716 (747)
9708 Q Consensus 693 ~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
9709 .+. ++.++..++.+|.+++...+
9710 T Consensus 315 ~~~-~~~v~~~a~~~L~~l~~~~~ 337 (354)
9711 T 5IZ8_A 315 HSK-HKMIAMGSAAALRNLMANRP 337 (354)
9712 T ss_dssp SCS-SHHHHHHHHHHHHHHHTTCC
9713 T ss_pred hcc-CHHHHHHHHHHHHHHHccCc
9714 Confidence 866 78899999999999997764
9715
9716
9717 No 225
9718 >5IZA_A Adenomatous polyposis coli protein, ACE-GLY-GLY-GLU-ALA-LEU-ALA-TRP-NH2; APC, ASEF, Colon CANCER, Drug; 1.5A {Homo sapiens}
9719 Probab=94.95 E-value=0.00036 Score=67.81 Aligned_cols=162 Identities=22% Similarity=0.254 Sum_probs=121.8 Template_Neff=12.000
9720
9721 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLK-EKGLPQIARLLQSGN----SDVVRSGAS 617 (747)
9722 Q Consensus 543 lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie-~giI~~Ll~LL~s~d----~eVr~~AL~ 617 (747)
9723 +.+.++++.|+.++....++.++..++++|.+++...+. ....+.+ .++++.|+.++...+ ..++..++.
9724 T Consensus 166 ~~~~~~~~~l~~~l~~~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 240 (354)
9725 T 5IZA_A 166 LREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTE-----NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGG 240 (354)
9726 T ss_dssp HHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCHH-----HHHHHHTSTTHHHHHHHHTCSSCSSCCHHHHHHHHH
9727 T ss_pred HHHCCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCChH-----hHHHHHhhccHHHHHHHHHhhcCCCCcHHHHHHHHH
9728 Confidence 356778888888887225677888999999999875232 2334455 688899998887533 678888999
9729
9730
9731 Q NP_000290.2 618 LLSNMSR----HPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC 692 (747)
9732 Q Consensus 618 aLsnLa~----~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL 692 (747)
9733 +|.+++. .... ..+...++++.++.++.. .++.++..++.+|.+++...+.....+.+.++++.|+.++
9734 T Consensus 241 ~L~~l~~~~~~~~~~~~~l~~~~~~~~l~~~l~~------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l 314 (354)
9735 T 5IZA_A 241 ILRNVSSLIATNEDHRQILRENNCLQTLLQHLKS------HSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLI 314 (354)
9736 T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTT
9737 T ss_pred HHHHHHHHhcCCHHHHHHHHHCCHHHHHHHHhhc------CCHHHHHHHHHHHHHHHccCHHHHHHHHhCCHHHHHHHHH
9738 Confidence 9999873 2222 233455678888888876 3677899999999999985466666677778889999988
9739
9740
9741 Q NP_000290.2 693 RSSASPKAAEAARLLLSDMWSSKE 716 (747)
9742 Q Consensus 693 ~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
9743 .+. ++.++..++.+|.+++...+
9744 T Consensus 315 ~~~-~~~v~~~a~~~L~~l~~~~~ 337 (354)
9745 T 5IZA_A 315 HSK-HKMIAMGSAAALRNLMANRP 337 (354)
9746 T ss_dssp TCS-SHHHHHHHHHHHHHHHHTCC
9747 T ss_pred hcc-CHHHHHHHHHHHHHHHccCc
9748 Confidence 866 78899999999999997764
9749
9750
9751 No 226
9752 >5YVI_A Transportin-1, RNA-binding protein FUS; Importin family, PROTEIN TRANSPORT, PROTEIN; 2.9A {Homo sapiens}
9753 Probab=94.92 E-value=0.00036 Score=74.50 Aligned_cols=156 Identities=12% Similarity=0.081 Sum_probs=94.0 Template_Neff=13.300
9754
9755 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
9756 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
9757 ..++.+...+. +.++.++..++.++..++..... .... .-..+++.+...+.+.+..++..++.++..++...
9758 T Consensus 645 ~~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~l~~l~~~l~~~~~~v~~~a~~~l~~l~~~~ 717 (868)
9759 T 5YVI_A 645 NILTLMYQCMQ-DKMPEVRQSSFALLGDLTKACFQ-----HVKP-CIADFMPILGTNLNPEFISVCNNATWAIGEISIQM 717 (868)
9760 T ss_dssp CHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHCHH-----HHGG-GHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHH
9761 T ss_pred hHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHhHH-----hHHH-HHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHc
9762 Confidence 34555666665 35677888899999888764321 0111 11346666777777777888999999999888652
9763
9764
9765 Q NP_000290.2 627 -LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
9766 Q Consensus 627 -e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
9767 .........+++.+...+.+. ..+..++..++.+|..++...+....... ..+++.++..+.+..++.++..++
9768 T Consensus 718 ~~~~~~~~~~i~~~l~~~l~~~----~~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~r~~~~ 792 (868)
9769 T 5YVI_A 718 GIEMQPYIPMVLHQLVEIINRP----NTPKTLLENTAITIGRLGYVCPQEVAPML-QQFIRPWCTSLRNIRDNEEKDSAF 792 (868)
9770 T ss_dssp GGGGGGGGGGTHHHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHCHHHHGGGH-HHHHHHHHHHHTTSCSSHHHHHHH
9771 T ss_pred cccchhcHHHHHHHHHHHhcCC----CCChhHHHHHHHHHHHHHHHCHHHHHHHH-HHHHHHHHHHhhcCCChHHHHHHH
9772 Confidence 111111123566666666541 01467888899999988865332111111 234555555555322567888888
9773
9774
9775 Q NP_000290.2 706 LLLSDMWSS 714 (747)
9776 Q Consensus 706 ~aLsnL~~~ 714 (747)
9777 .++..+...
9778 T Consensus 793 ~~l~~l~~~ 801 (868)
9779 T 5YVI_A 793 RGICTMISV 801 (868)
9780 T ss_dssp HHHHHC-CC
9781 T ss_pred HHHHHHHhh
9782 Confidence 888888754
9783
9784
9785 No 227
9786 >6QH7_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: SEP; 3.4A {Rattus norvegicus}
9787 Probab=94.91 E-value=0.00038 Score=73.02 Aligned_cols=108 Identities=17% Similarity=0.103 Sum_probs=69.7 Template_Neff=12.200
9788
9789 Q NP_000290.2 242 CSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLL--RSPNQNVQQAAAGALRNLVFRST 319 (747)
9790 Q Consensus 242 ~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL--~s~d~eVr~~AL~aLs~La~~~~ 319 (747)
9791 ....+++.+...+.+.++.++..++.++..+.... ....+++.+...+ .+.++.++..++.++..+.....
9792 T Consensus 108 ~~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~-------~~~~l~~~l~~~l~~~~~~~~vr~~a~~~L~~~~~~~~ 180 (621)
9793 T 6QH7_A 108 LIRLINNAIKNDLASRNPTFMGLALHCIANVGSRE-------MAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSP 180 (621)
9794 T ss_dssp HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCHH-------HHHHHTTHHHHHHTTSCCCHHHHHHHHHHHHHHHHHCG
9795 T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCHH-------HHHHHHhhHHHHHHcCCCCHHHHHHHHHHHHHHHHHCh
9796 Confidence 33445556666666677788888888888775421 1123455566666 66677888888888888765332
9797
9798
9799 Q NP_000290.2 320 TNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
9800 Q Consensus 320 ~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
9801 ... .....++.+...+. +.++.++..++.++..+...
9802 T Consensus 181 ~~~---~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 217 (621)
9803 T 6QH7_A 181 DLV---PMGDWTSRVVHLLN-DQHLGVVTAATSLITTLAQK 217 (621)
9804 T ss_dssp GGC---CCCTTHHHHHHGGG-CSSHHHHHHHHHHHHHHHTT
9805 T ss_pred hhc---CccchHHHHHHHhc-CCCHHHHHHHHHHHHHHHHh
9806 Confidence 211 11245566667775 55677888888888887753
9807
9808
9809 No 228
9810 >1B3U_A PROTEIN PHOSPHATASE PP2A, 65 KD; SCAFFOLD PROTEIN, PP2A, PHOSPHORYLATION, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.2
9811 Probab=94.85 E-value=0.0004 Score=70.07 Aligned_cols=146 Identities=11% Similarity=0.055 Sum_probs=95.0 Template_Neff=13.400
9812
9813 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
9814 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
9815 ..++.+..++. +.+..++..++.+|..+...... . . ....+++.+...+.+.+..++..++.++..+....
9816 T Consensus 441 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~ 511 (588)
9817 T 1B3U_A 441 KLNSLCMAWLV-DHVYAIREAATSNLKKLVEKFGK------E-W-AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVC 511 (588)
9818 T ss_dssp HHHHHHHHGGG-CSSHHHHHHHHHHHHHHHHHHCH------H-H-CCCCCHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
9819 T ss_pred HHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHhCh------H-H-HHHhHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHh
9820 Confidence 34566667776 46677888888888888764221 1 1 12356677777777777888888888888887642
9821
9822
9823 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
9824 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
9825 .. ......+++.+...+.+ .++.++..++.++..+...... ......+++.+...+.+. ++.++..+..
9826 T Consensus 512 ~~-~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~ 580 (588)
9827 T 1B3U_A 512 GQ-DITTKHMLPTVLRMAGD------PVANVRFNVAKSLQKIGPILDN---STLQSEVKPILEKLTQDQ-DVDVKYFAQE 580 (588)
9828 T ss_dssp HH-HHCCCCCHHHHHHGGGC------SCHHHHHHHHHHHHHHGGGSCH---HHCCCCCHHHHHHHTTCS-SHHHHHHHHH
9829 T ss_pred CH-HHHHhchHHHHHHHhCC------CcHHHHHHHHHHHHHHHHHhcC---CcchHHHHHHHHHHhcCC-ChhHHHHHHH
9830 Confidence 11 11123455666666665 3678899999999988754211 112224566677777765 7788888888
9831
9832
9833 Q NP_000290.2 707 LLSDMW 712 (747)
9834 Q Consensus 707 aLsnL~ 712 (747)
9835 ++..+.
9836 T Consensus 581 ~l~~l~ 586 (588)
9837 T 1B3U_A 581 ALTVLS 586 (588)
9838 T ss_dssp HHHHTT
9839 T ss_pred HHHHhh
9840 Confidence 887765
9841
9842
9843 No 229
9844 >4HM9_A Beta-catenin-like protein 1; all alpha-helical, armadillo repeats, PROTEIN; 3.1001A {Homo sapiens}
9845 Probab=94.77 E-value=0.00057 Score=75.04 Aligned_cols=161 Identities=14% Similarity=0.093 Sum_probs=111.6 Template_Neff=8.100
9846
9847 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSK--KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-----SG----NSDV 611 (747)
9848 Q Consensus 543 lve~G~I~~LL~LL~ss~--d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-----s~----d~eV 611 (747)
9849 +.+.++++.|+.+|.. . ....+..|+.+|.+|+...+. ....+.+.++++.|+.+|. ++ ....
9850 T Consensus 241 i~~~g~l~~Ll~lL~~-~~~~~~~k~~AaeiL~~L~~~~~~-----~r~~l~~~g~I~~LL~lL~~y~~~d~~~~~e~e~ 314 (568)
9851 T 4HM9_A 241 GAQQGLLQWLLKRLKA-KMPFDANKLYCSEVLAILLQDNDE-----NRELLGELDGIDVLLQQLSVFKRHNPSTAEEQEM 314 (568)
9852 T ss_dssp HCCCCCHHHHHHHHHS-SCCCCHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTHHHHHHHHHGGGTTSCCSSSHHHHH
9853 T ss_pred HHHCCHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHcCCHH-----HHHHHHhCchHHHHHHHHHhhhccCCCCHHHHHH
9854 Confidence 3567889999999983 3 466778899999999875332 2444456889999999995 11 1234
9855
9856
9857 Q NP_000290.2 612 VRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS--QPQLAKQYFSSSMLNNI 688 (747)
9858 Q Consensus 612 r~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~--s~e~~~~Lve~giL~~L 688 (747)
9859 ...++.+|.+++..+.. ..++..++++.++.+|.. ....+..|+.+|..++.. .......+++.+++..|
9860 T Consensus 315 ~en~~~aL~~L~~~~~~r~~f~~~~gv~lLv~lL~~-------~~~~~~~Al~vL~~a~~~~~~~~~~~~~ve~ggl~~L 387 (568)
9861 T 4HM9_A 315 MENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLRE-------KKISRSSALKVLDHAMIGPEGTDNCHKFVDILGLRTI 387 (568)
9862 T ss_dssp HHHHHHHHHHHTTSTHHHHHHHHTTHHHHHHHHHHH-------TSTTHHHHHHHHHHHHCSGGGHHHHHHHHHTTCHHHH
9863 T ss_pred HHHHHHHHHHHhCCHHHHHHHHHCChHHHHHHHHhC-------ChhHHHHHHHHHHHHhcCCCChhHHHHHHHHchHHHH
9864 Confidence 55668888888876544 355666788888888875 234567778888665442 34456677777888888
9865
9866
9867 Q NP_000290.2 689 INLCRSS---------ASPKAAEAARLLLSDMWSSKE 716 (747)
9868 Q Consensus 689 l~LL~s~---------~d~eVr~aAL~aLsnL~~~~~ 716 (747)
9869 +.++... ......+.++.+|..|+....
9870 T Consensus 388 ~~ll~~~~~~~~~~~~~~~e~~E~~~~iL~sL~~~~~ 424 (568)
9871 T 4HM9_A 388 FPLFMKSPRKIKKVGTTEKEHEEHVCSILASLLRNLR 424 (568)
9872 T ss_dssp HHHHHSCCCCCSSSSCCHHHHHHHHHHHHHHHHHHCC
9873 T ss_pred HHHHhcCcchhcCCCCCHHHHHHHHHHHHHHHHhcCC
9874 Confidence 8876532 134567888888888886543
9875
9876
9877 No 230
9878 >6QH5_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
9879 Probab=94.76 E-value=0.00048 Score=72.19 Aligned_cols=144 Identities=13% Similarity=0.054 Sum_probs=85.0 Template_Neff=12.200
9880
9881 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSD--VVRSGASLLSNMSRH 625 (747)
9882 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~e--Vr~~AL~aLsnLa~~ 625 (747)
9883 .++.|+..+. +.++.++..++.++..+...... ....+++.+...+.+.+.. ++..++++++.+...
9884 T Consensus 442 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~ 510 (621)
9885 T 6QH5_A 442 YVDTILNLIR-IAGDYVSEEVWYRVIQIVINRDD----------VQGYAAKTVFEALQAPACHENLVKVGGYILGEFGNL 510 (621)
9886 T ss_pred HHHHHHHHhc-CCCHHHcHHHHHHHHHHHhcCHH----------HHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhh
9887 Confidence 4556666665 34556666777777766543111 1233455666666655544 777788888777654
9888
9889
9890 Q NP_000290.2 626 P-LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC---RSSASPKAA 701 (747)
9891 Q Consensus 626 ~-e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL---~s~~d~eVr 701 (747)
9892 . .........+++.|...+.+ .+..++..++.+|..+....+. . ...+..++..+ .+. ++.++
9893 T Consensus 511 ~~~~~~~~~~~~~~~L~~~l~~------~~~~vr~~a~~al~~l~~~~~~-----~-~~~l~~ll~~l~~~~~~-~~~vr 577 (621)
9894 T 6QH5_A 511 IAGDPRSSPLIQFNLLHSKFHL------CSVPTRALLLSTYIKFVNLFPE-----V-KATIQDVLRSDSQLKNA-DVELQ 577 (621)
9895 T ss_pred CCCCCCCCHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhCHH-----H-HhHHHHHHHHHHhcCCC-CHHHH
9896 Confidence 1 11110111245556666655 3567888899999988764322 1 12344555544 444 77889
9897
9898
9899 Q NP_000290.2 702 EAARLLLSDMWSSK 715 (747)
9900 Q Consensus 702 ~aAL~aLsnL~~~~ 715 (747)
9901 ..++.++..+....
9902 T Consensus 578 ~~a~~~l~~~~~~~ 591 (621)
9903 T 6QH5_A 578 QRAVEYLRLSTVAS 591 (621)
9904 T ss_pred HHHHHHHHHhCCCc
9905 Confidence 99999988876543
9906
9907
9908 No 231
9909 >5MFO_F YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: CA, EDO; 1.3A {synthetic construct}
9910 Probab=94.68 E-value=0.00052 Score=58.87 Aligned_cols=134 Identities=25% Similarity=0.276 Sum_probs=89.8 Template_Neff=13.100
9911
9912 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9913 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9914 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+.+.+..++..++.++..++...+.....+
9915 T Consensus 47 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~ 126 (202)
9916 T 5MFO_F 47 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 126 (202)
9917 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
9918 T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
9919 Confidence 45566666777777888899999999886544333334444577777777777777888889999998876543333333
9920
9921
9922 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
9923 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
9924 ...++++.+...+. ..+..++..++.++..++..... ...+.. ++++.|..++.
9925 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 182 (202)
9926 T 5MFO_F 127 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGAEPALEQLQS 182 (202)
9927 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHTTTT
9928 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcChHHHHHHHHHCCHHHHHHHHHc
9929 Confidence 34456777777776 55677888888999888875322 222222 56666666664
9930
9931
9932 No 232
9933 >5MFO_E YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: EDO, CA; 1.3A {synthetic construct}
9934 Probab=94.66 E-value=0.00054 Score=58.80 Aligned_cols=134 Identities=25% Similarity=0.276 Sum_probs=89.7 Template_Neff=13.100
9935
9936 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
9937 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
9938 +++.+...+.+.++.++..++.++.+++.........+...++++.+...+.+.+..++..++.++..++.........+
9939 T Consensus 47 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 126 (202)
9940 T 5MFO_E 47 ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAV 126 (202)
9941 T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
9942 T ss_pred hHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
9943 Confidence 45566666777778888899999999886544333334444577777777777777888889999988876543333333
9944
9945
9946 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
9947 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
9948 ...++++.+...+. ..+..++..++.++..++..... ...+.. ++++.|..++.
9949 T Consensus 127 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 182 (202)
9950 T 5MFO_E 127 IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGAEPALEQLQS 182 (202)
9951 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT
9952 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHCCHHHHHHHHHc
9953 Confidence 33456777777776 55677888889999888875322 222222 56666666654
9954
9955
9956 No 233
9957 >4MFU_A Beta-catenin-like protein 1; ARM repeats, GENE REGULATION; 2.744A {Homo sapiens}
9958 Probab=94.63 E-value=0.00067 Score=72.78 Aligned_cols=161 Identities=14% Similarity=0.093 Sum_probs=111.4 Template_Neff=8.700
9959
9960 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSK--KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-----SG----NSDV 611 (747)
9961 Q Consensus 543 lve~G~I~~LL~LL~ss~--d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-----s~----d~eV 611 (747)
9962 +.+.++++.|+.++.. . ....+..++.+|.+++...+. ....+.+.++++.|+.++. ++ ....
9963 T Consensus 163 i~~~~~l~~Ll~~L~~-~~~~~~~k~~a~~~L~~L~~~~~~-----~~~~l~~~g~i~~Ll~lL~~~~~~d~~~~~~~e~ 236 (490)
9964 T 4MFU_A 163 GAQQGLLQWLLKRLKA-KMPFDANKLYCSEVLAILLQDNDE-----NRELLGELDGIDVLLQQLSVFKRHNPSTAEEQEM 236 (490)
9965 T ss_dssp HCCCCCHHHHHHHHHC-CSCCCHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTHHHHHHHHHHTTSSSCCSSHHHHHH
9966 T ss_pred HHHCCHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHcCCHH-----HHHHHHhCchHHHHHHHHHhhhhcCCCCHHHHHH
9967 Confidence 3567889999999983 3 467788899999999875332 2444456789999999985 11 1234
9968
9969
9970 Q NP_000290.2 612 VRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS--QPQLAKQYFSSSMLNNI 688 (747)
9971 Q Consensus 612 r~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~--s~e~~~~Lve~giL~~L 688 (747)
9972 ...++.+|++++..+.. ..++..++++.++.++.. ....+..|+.+|...+.. ++.....+++.+++..|
9973 T Consensus 237 ~en~~~aL~~L~~~~~~~~~f~~~~gi~llv~lL~~-------~~~~~~~AL~~L~~a~~~~~~~~~~~~~v~~ggl~~L 309 (490)
9974 T 4MFU_A 237 MENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLRE-------KKISRSSALKVLDHAMIGPEGTDNCHKFVDILGLRTI 309 (490)
9975 T ss_dssp HHHHHHHHHHHHHSTHHHHHHHHTTHHHHHHHHHHT-------TSSTHHHHHHHHHHHHSSGGGHHHHHHHHHTTHHHHH
9976 T ss_pred HHHHHHHHHHHhCCHHHHHHHHHCCcHHHHHHHHhC-------ChhHHHHHHHHHHHHhcCCCCHHHHHHHHHHchHHHH
9977 Confidence 45568888888876444 355666788888888865 234566677777665442 34456677777888888
9978
9979
9980 Q NP_000290.2 689 INLCRSS---------ASPKAAEAARLLLSDMWSSKE 716 (747)
9981 Q Consensus 689 l~LL~s~---------~d~eVr~aAL~aLsnL~~~~~ 716 (747)
9982 +.++... .+..+.+.++.+|..|+....
9983 T Consensus 310 ~~~l~~~~~~~~~~~~~~~~~~E~~~~il~sL~~~~~ 346 (490)
9984 T 4MFU_A 310 FPLFMKSPRKIKKVGTTEKEHEEHVCSILASLLRNLR 346 (490)
9985 T ss_dssp HHHHHCCCCSCCSSCCCSHHHHHHHHHHHHHHHHHCC
9986 T ss_pred HHHHhcCcccccCCCCCHHHHHHHHHHHHHHHHhcCC
9987 Confidence 8877542 134677888899888887543
9988
9989
9990 No 234
9991 >2NYL_A Protein phosphatase 2, regulatory subunit; HEAT repeat, HYDROLASE-HYDROLASE INHIBITOR COMPLEX; HET: DAL, MSE, ACB, 1ZN, DAM, FGA; 3.8A {Homo sapiens} SCOP: a.118.1.2
9992 Probab=94.58 E-value=0.00059 Score=68.47 Aligned_cols=145 Identities=11% Similarity=0.056 Sum_probs=94.9 Template_Neff=13.500
9993
9994 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
9995 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
9996 .++.+..++. +.++.++..++.+|..+...... . . ....+++.+...+.+.+..++..++.++..+.....
9997 T Consensus 436 ~~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~~ 506 (582)
9998 T 2NYL_A 436 LNSLCMAWLV-DHVYAIREAATSNLKKLVEKFGK------E-W-AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG 506 (582)
9999 T ss_dssp CHHHHHHGGG-CSSHHHHHHHHHHHHHHHHHHHH------H-H-HHHHTHHHHHHTTTCSSHHHHHHHHHHHHHHGGGSC
10000 T ss_pred HHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHCh------h-h-HHhcHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhC
10001 Confidence 4555666776 46777888899998888764221 1 1 124566777777777778888888998888876421
10002
10003
10004 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
10005 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
10006 .. .....+++.+...+.+ .++.++..++.++..+...... ......+++.+...+.+. ++.++..++.+
10007 T Consensus 507 ~~-~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 575 (582)
10008 T 2NYL_A 507 QD-ITTKHMLPTVLRMAGD------PVANVRFNVAKSLQKIGPILDN---STLQSEVKPILEKLTQDQ-DVDVKYFAQEA 575 (582)
10009 T ss_dssp HH-HHHHHTHHHHHHTSSC------SSHHHHHHHHHHHTTSSTTSCH---HHCCCCCHHHTTTTTTCS-SHHHHHHHHTT
10010 T ss_pred HH-HHHhcHHHHHHHHhcC------ChHHHHHHHHHHHHHHHHHcCC---CCcHHHHHHHHHHHhcCC-CHHHHHHHHHH
10011 Confidence 11 1123355666666665 3678889999999988764211 112224566677777665 77888888888
10012
10013
10014 Q NP_000290.2 708 LSDMW 712 (747)
10015 Q Consensus 708 LsnL~ 712 (747)
10016 +..++
10017 T Consensus 576 l~~l~ 580 (582)
10018 T 2NYL_A 576 LTVLS 580 (582)
10019 T ss_dssp TTTTT
10020 T ss_pred HHHhc
10021 Confidence 88765
10022
10023
10024 No 235
10025 >4U2X_F eVP24, KPNA5C; eVP24, importin alpha6, immune antagonist; 3.153A {Zaire ebolavirus}
10026 Probab=94.35 E-value=0.00082 Score=57.14 Aligned_cols=73 Identities=21% Similarity=0.253 Sum_probs=49.2 Template_Neff=12.500
10027
10028 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS 318 (747)
10029 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~ 318 (747)
10030 +++.+...+.+.++.++..++.++.+++.. .+.....+...++++.+...+...++.++..++.++.+++...
10031 T Consensus 51 ~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~ 124 (175)
10032 T 4U2X_F 51 IFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVALGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 124 (175)
10033 T ss_dssp CHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHH
10034 T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHhcc
10035 Confidence 455555666666677888888999888753 2223333334466777777777666777888888888887643
10036
10037
10038 No 236
10039 >3SL9_B Catenin beta-1, B-cell CLL/lymphoma 9; Armadillo repeat, components of the; HET: GOL, EDO, PEG, IMD; 2.2A {Homo sapiens}
10040 Probab=94.35 E-value=0.00082 Score=56.48 Aligned_cols=110 Identities=24% Similarity=0.309 Sum_probs=73.4 Template_Neff=12.600
10041
10042 Q NP_000290.2 246 TIPKAVQYLSS-QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
10043 Q Consensus 246 iL~~Ll~lL~s-sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
10044 +++.+...+.. .+..++..++.++.+++.. +.....+...++++.+..++...++.++..++.++.+++.........
10045 T Consensus 56 ~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 134 (167)
10046 T 3SL9_B 56 MVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 134 (167)
10047 T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-HhHHHHHHHCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHhHHHH
10048 Confidence 55566666665 5677888889999888743 333334444567788888887777788888999999888654332222
10049
10050
10051 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNL 357 (747)
10052 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnL 357 (747)
10053 ....++++.+..++. ..++.++..++.++..+
10054 T Consensus 135 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l 166 (167)
10055 T 3SL9_B 135 VRLAGGLQKMVALLN-KTNVKFLAITTDCLQIL 166 (167)
10056 T ss_pred HHHcCHHHHHHHHhc-CCCHHHHHHHHHHHHHh
10057 Confidence 222456777777776 45566777777776654
10058
10059
10060 No 237
10061 >4I5L_D PP2A A alpha subunit (9-589); EF Hand, Phosphatase, CDC6 (Substrate); HET: FGA, ACB, DAL, MLI, PEG, 1ZN, MAA; 2.43A {Microcystis aeruginosa}
10062 Probab=94.34 E-value=0.0008 Score=67.65 Aligned_cols=110 Identities=11% Similarity=0.101 Sum_probs=57.6 Template_Neff=13.400
10063
10064 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL-E 324 (747)
10065 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~-~ 324 (747)
10066 +++.+...+.+.++.++..++.++..+...... ......+++.+...+.+.++.++..++.++..+......... .
10067 T Consensus 239 ~~~~l~~~l~~~~~~vr~~~~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~ 315 (584)
10068 T 4I5L_D 239 VMPTLRQAAEDKSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCREN 315 (584)
10069 T ss_dssp THHHHHHHHTCSSHHHHHHHHHTHHHHHHHHHH---HHCCCCCHHHHHHHHTCSSHHHHHHHHTTHHHHHHTSCTTTHHH
10070 T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHCC---CCChhhHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhcCccchhh
10071 Confidence 334444455555666777777777666543221 111123455566666666667777777777776643221110 0
10072
10073
10074 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
10075 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
10076 .....+++.+...+. +.++.++..++.++..+..
10077 T Consensus 316 ~~~~~~~~~l~~~l~-~~~~~vr~~~~~~l~~l~~ 349 (584)
10078 T 4I5L_D 316 VIMSQILPCIKELVS-DANQHVKSALASVIMGLSP 349 (584)
10079 T ss_dssp HCCCCCHHHHHHHHT-CSCHHHHHHHHTTGGGGHH
10080 T ss_pred HHHHhHHHHHHHHcc-CCCHHHHHHHHHHHHHHHH
10081 Confidence 111234455555554 3445566666666665544
10082
10083
10084 No 238
10085 >4U2X_E eVP24, KPNA5C; eVP24, importin alpha6, immune antagonist; 3.153A {Zaire ebolavirus}
10086 Probab=94.27 E-value=0.00091 Score=56.83 Aligned_cols=73 Identities=21% Similarity=0.253 Sum_probs=49.3 Template_Neff=12.500
10087
10088 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQ-DESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS 318 (747)
10089 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~-~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~ 318 (747)
10090 +++.+...+.+.++.++..++.++.+++.. .......+...+.++.+...+.+.++.++..++.++.+++...
10091 T Consensus 51 ~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~ 124 (175)
10092 T 4U2X_E 51 IFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVALGCIKPLCDLLTVMDSKIVQVALNGLENILRLG 124 (175)
10093 T ss_dssp CHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHH
10094 T ss_pred hHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHhhc
10095 Confidence 445555666666677888889999988753 2222333334456777777777667778888888888887654
10096
10097
10098 No 239
10099 >4UQI_B AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ENDOCYTOSIS, PROTEIN TRANSPORT, LIPID BINDING; HET: IHP; 2.79A {RATTUS NORVEGICUS}
10100 Probab=94.24 E-value=0.00095 Score=70.34 Aligned_cols=106 Identities=12% Similarity=0.039 Sum_probs=70.7 Template_Neff=12.200
10101
10102 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
10103 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
10104 ..+++.+...+.+.++.++..++.++..+.... ....+++.+...+.+.++.++..++.++..+........
10105 T Consensus 85 ~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~-------~~~~l~~~l~~~l~~~~~~vr~~a~~~L~~l~~~~~~~~- 156 (657)
10106 T 4UQI_B 85 IMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDK-------ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV- 156 (657)
10107 T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhhcCCch-------hHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCHHHh-
10108 Confidence 445555666666677788888888888775421 112355666666777778888889988888875433221
10109
10110
10111 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
10112 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
10113 ....+++.+...+. +.++.++..++.++..+...
10114 T Consensus 157 --~~~~~~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~ 190 (657)
10115 T 4UQI_B 157 --EDQGFLDSLRDLIA-DSNPMVVANAVAALSEISES 190 (657)
10116 T ss_pred --cCcchHHHHHHHhc-CCCHHHHHHHHHHHHHHHhc
10117 Confidence 12245666777776 55678888899988888764
10118
10119
10120 No 240
10121 >5KC2_B Phosphatidylinositol 3-kinase VPS34 (E.C.2.7.1.137), Serine/threonine-protein; autophagy, phosphatidylinositol 3-kinase (PtdIns3K), endocytosis; 28.0A {Saccharomyces cerevisiae}
10122 Probab=94.04 E-value=0.0013 Score=79.08 Aligned_cols=155 Identities=11% Similarity=0.032 Sum_probs=110.7 Template_Neff=9.500
10123
10124 Q NP_000290.2 544 YHSDAIRTYLNLM---GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIG----------------------LKEKGLP 598 (747)
10125 Q Consensus 544 ve~G~I~~LL~LL---~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~ll----------------------ie~giI~ 598 (747)
10126 +..++++.|..++ . +.++.++..|+.+|..++..... ....+ ...++++
10127 T Consensus 506 ~~~~~l~~L~~ll~~~~-d~~~~vR~~a~~~l~~la~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 579 (1454)
10128 T 5KC2_B 506 FVDYLLPRLKRLLISNR-QNTNYLRIVFANCLSDLAIIINR-----FQEFTFAQHCNDNSMDNNTEIMESSTKYSAKLIQ 579 (1454)
10129 T ss_pred HHcCcHHHHHHHHcCCC-CCcHHHHHHHHHHHHHHhcCCCC-----cceEEhhHHhhhHHHHHHHHHHHHHHHHHcCHHH
10130 Confidence 4667888899988 7 47788899999999988754221 01111 1245667
10131
10132
10133 Q NP_000290.2 599 QIARLLQS----GNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ 674 (747)
10134 Q Consensus 599 ~Ll~LL~s----~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e 674 (747)
10135 .|..++.. .++.++..|+.+|..+.......... .++++.|..++.+ .++.++..|+.+|..|+...
10136 T Consensus 580 ~l~~ll~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~-~~~l~~L~~~l~d------~~~~vR~~a~~al~~l~~~~-- 650 (1454)
10137 T 5KC2_B 580 SVEDLTVSFLTDNDTYVKMALLQNILPLCKFFGRERTN-DIILSHLITYLND------KDPALRVSLIQTISGISILL-- 650 (1454)
10138 T ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHHhcCcCchhHH-hhhHHHHHHHccC------CCHHHHHHHHHHHHHHHHhh--
10139 Confidence 77777765 78899999999999987652221111 4567888888876 47899999999999998743
10140
10141
10142 Q NP_000290.2 675 LAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
10143 Q Consensus 675 ~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
10144 ....+++.. ++.|+.+|.+. ++.++..++.+|..|+...
10145 T Consensus 651 ~~~~~~~~~-lp~L~~lL~d~-~~~vr~~al~aL~~L~~~~ 689 (1454)
10146 T 5KC2_B 651 GTVTLEQYI-LPLLIQTITDS-EELVVISVLQSLKSLFKTG 689 (1454)
10147 T ss_pred HHHHHHHcC-HHHHHHHhcCC-CHHHHHHHHHHHHHHhhCC
10148 Confidence 333444433 88888888876 7888999999999887655
10149
10150
10151 No 241
10152 >3SL9_E Catenin beta-1, B-cell CLL/lymphoma 9; Armadillo repeat, components of the; HET: PEG, GOL, IMD, EDO; 2.2A {Homo sapiens}
10153 Probab=94.03 E-value=0.0012 Score=55.43 Aligned_cols=110 Identities=24% Similarity=0.309 Sum_probs=72.2 Template_Neff=12.600
10154
10155 Q NP_000290.2 246 TIPKAVQYLSS-QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
10156 Q Consensus 246 iL~~Ll~lL~s-sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
10157 +++.+...+.. .+..++..++.++.+++.. ......+...++++.+..++...+..++..++.++.+++.........
10158 T Consensus 56 ~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 134 (167)
10159 T 3SL9_E 56 MVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMA 134 (167)
10160 T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS-HHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCTTHHHH
10161 T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-HhHHHHHHHCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHhHHHH
10162 Confidence 55566666665 5667888888898888743 333333444567777888887777788888999998887654332222
10163
10164
10165 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNL 357 (747)
10166 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnL 357 (747)
10167 ....++++.+..++. ..++.++..++.++..+
10168 T Consensus 135 ~~~~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l 166 (167)
10169 T 3SL9_E 135 VRLAGGLQKMVALLN-KTNVKFLAITTDCLQIL 166 (167)
10170 T ss_dssp HHHTTHHHHHHHHHH-HSCGGGHHHHHHHHHHH
10171 T ss_pred HHHcCHHHHHHHHhc-CCCHHHHHHHHHHHHHh
10172 Confidence 222456777777776 45566777777766654
10173
10174
10175 No 242
10176 >3VWA_B Cytoplasmic export protein 1; tRNA, nuclear export, HEAT repeat; HET: MSE; 2.2A {Saccharomyces cerevisiae}
10177 Probab=93.76 E-value=0.0017 Score=68.89 Aligned_cols=150 Identities=11% Similarity=0.077 Sum_probs=108.5 Template_Neff=10.700
10178
10179 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
10180 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
10181 .++++.++..+. +.++.++..++.+|..++..... . . ....+++.|..++.+.++.++..++.+|+.++..
10182 T Consensus 379 ~~~l~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~------~-~-~~~~ll~~l~~~l~d~~~~vR~~a~~~l~~i~~~ 449 (560)
10183 T 3VWA_B 379 SRIYPHFIQGLT-DSDATLRLQTLKTIPCIVSCLTE------R-Q-LNNELLRFLAKTQVDSDVEIRTWTVIIISKISTI 449 (560)
10184 T ss_dssp CCCHHHHHHGGG-CSCHHHHHHHHHHHHHHGGGSCH------H-C-CCCCHHHHHHHHTTCSSHHHHHHHHHHHHHHHTT
10185 T ss_pred hchHHHHHHHhc-CCCHHHHHHHHHHHHHHHhhCCH------H-H-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
10186 Confidence 457788888887 47788999999999998864221 1 1 2356788888888888899999999999999876
10187
10188
10189 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
10190 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
10191 ... .......+++.+...+.+ .++.++..|+.+|..++.... ... +...+++.|..++.+. +..++..|
10192 T Consensus 450 ~~~~~~~~~~~l~~~l~~~l~d------~~~~vR~aa~~~l~~~~~~~~--~~~-~~~~~lp~l~~~l~d~-~~~VR~~a 519 (560)
10193 T 3VWA_B 450 LSTSVGNRSNILATAFTKSLKD------PQVKPRLAALYGLEKSIELFD--VNT-IANKILTVIAPGLLDK-SPIVRGRA 519 (560)
10194 T ss_dssp SSSCHHHHHHHHHHHHHHHHTC------SSHHHHHHHHHHHHHTGGGSC--HHH-CCCCCHHHHGGGGGCS-SHHHHHHH
10195 T ss_pred hccccchhHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHCC--HHH-HHHHHHHHHHHHHCCC-CHHHHHHH
10196 Confidence 211 111123455666677765 478899999999999886422 112 2245788888888877 88999999
10197
10198
10199 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
10200 Q Consensus 705 L~aLsnL~~~ 714 (747)
10201 +.+|..++..
10202 T Consensus 520 ~~~l~~~~~~ 529 (560)
10203 T 3VWA_B 520 KILFEEYLEK 529 (560)
10204 T ss_dssp HHHHHHHHHH
10205 T ss_pred HHHHHHHHHH
10206 Confidence 9999888754
10207
10208
10209 No 243
10210 >5DFZ_B Vacuolar protein sorting-associated protein 38; Vps34, Vps15, Vps30, Vps38, Autophagy; 4.4A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
10211 Probab=93.74 E-value=0.0018 Score=77.73 Aligned_cols=155 Identities=10% Similarity=0.029 Sum_probs=111.5 Template_Neff=9.900
10212
10213 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
10214 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
10215 .++++.|+.+|. +.++.+|..|+.+|..+...... .. .....++.|+.++.+.++.++..|+.+|..+...
10216 T Consensus 608 ~~~l~~Li~ll~-d~~~~VR~~a~~aL~~i~~~~~~-------~~-~~~~~i~~L~~~l~d~~~~vR~~a~~aL~~~~~~ 678 (1460)
10217 T 5DFZ_B 608 DIILSHLITYLN-DKDPALRVSLIQTISGISILLGT-------VT-LEQYILPLLIQTITDSEELVVISVLQSLKSLFKT 678 (1460)
10218 T ss_pred HhHHHHHHHHhc-CCCHHHHHHHHHHHHHHHhhcCc-------hh-hchhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
10219 Confidence 357888888888 57889999999999998864221 11 1234578888899988899999999999766543
10220
10221
10222 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
10223 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
10224 ......+..++++.|..++.+ .++.++..|+.+|..+....... .....+++.|+.++.+. ++.++..|+
10225 T Consensus 679 ~~~~~~~~~~~i~~l~~~l~d------~~~~VR~~A~~al~~l~~~~~~~---~~~~~~l~~L~~~l~d~-~~~vr~~a~ 748 (1460)
10226 T 5DFZ_B 679 GLIRKKYYIDISKTTSPLLLH------PNNWIRQFTLMIIIEIINKLSKA---EVYCILYPIIRPFFEFD-VEFNFKSMI 748 (1460)
10227 T ss_pred cchhhcccchhHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHhcCC-CHHHHHHHH
10228 Confidence 222111112367778888876 47889999999999987642111 11234688888888877 889999999
10229
10230
10231 Q NP_000290.2 706 LLLSDMWSSKELQG 719 (747)
10232 Q Consensus 706 ~aLsnL~~~~~~~~ 719 (747)
10233 .+|..+..+...+-
10234 T Consensus 749 ~aL~~~~~~~~~~~ 762 (1460)
10235 T 5DFZ_B 749 SCCKQPVSRSVYNL 762 (1460)
10236 T ss_pred HHhCCCCCHHHHHH
10237 Confidence 99999887776664
10238
10239
10240 No 244
10241 >6HWP_A A3_bGFPD; alphaRep, artificial protein, chimera, bidomain; 2.547A {synthetic construct}
10242 Probab=93.71 E-value=0.0016 Score=62.80 Aligned_cols=91 Identities=14% Similarity=0.155 Sum_probs=54.4 Template_Neff=12.900
10243
10244 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
10245 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
10246 ..++.+...+.+.+..++..++..+..+.. ..+++.+...+.+.++.++..++..+..+..
10247 T Consensus 23 ~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~-----------~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~-------- 83 (409)
10248 T 6HWP_A 23 EKVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD-------- 83 (409)
10249 T ss_dssp CCHHHHHHGGGCSSHHHHHHHHHHHHHSCC-----------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTC--------
10250 T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHhcC-----------HhhHHHHHHHhcCCCHHHHHHHHHHHHHhcC--------
10251 Confidence 445556666666677778888877776643 1234445555556667777777777766543
10252
10253
10254 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
10255 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
10256 ...++.+...+. +.++.++..++.++..+.
10257 T Consensus 84 ---~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~ 113 (409)
10258 T 6HWP_A 84 ---ERAVEPLIKALK-DEDGWVRQSAAVALGQIG 113 (409)
10259 T ss_dssp ---GGGHHHHHHHTT-CSSHHHHHHHHHHHHHHT
10260 T ss_pred ---HhhHHHHHHHhc-CCCHHHHHHHHHHHHHHC
10261 Confidence 123344445554 445566666666666554
10262
10263
10264 No 245
10265 >3TT9_A Plakophilin-2; CELL ADHESION; HET: GOL; 1.55A {Homo sapiens}
10266 Probab=93.69 E-value=0.0017 Score=58.18 Aligned_cols=169 Identities=18% Similarity=0.246 Sum_probs=122.4 Template_Neff=12.300
10267
10268 Q NP_000290.2 542 WLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLS 620 (747)
10269 Q Consensus 542 ~lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLs 620 (747)
10270 .+++.|+++.|+.++. ..++.++..++++|.+++...+. ....+.+.++++.|+.++. ..+..++..++++|.
10271 T Consensus 47 ~~~~~~~i~~l~~~l~-~~~~~~~~~a~~~L~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~ 120 (233)
10272 T 3TT9_A 47 RVNQLRGILKLLQLLK-VQNEDVQRAVCGALRNLVFEDND-----NKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLW 120 (233)
10273 T ss_dssp HHHHTTHHHHHHHGGG-CCCHHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHH
10274 T ss_pred HHHHcchHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCCc-----HHHHHHHcccHHHHHHHHhhCCCHHHHHHHHHHHH
10275 Confidence 3467788999999998 46778889999999999874332 2444456789999999998 567889999999999
10276
10277
10278 Q NP_000290.2 621 NMSRHPLL-HRVMGNQVFPEVTRLLTSHTGN---------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSM-LNNII 689 (747)
10279 Q Consensus 621 nLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~---------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~gi-L~~Ll 689 (747)
10280 +++..... ..+...+++..+..++...... ...+..++..++++|.+++...+.....+.+.+. ++.|+
10281 T Consensus 121 ~l~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~l~ 200 (233)
10282 T 3TT9_A 121 NLSSNDKLKNLMITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLV 200 (233)
10283 T ss_dssp HHHTSGGGHHHHHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHH
10284 T ss_pred HHccCHHHHHHhhhhcHHHHHHHHHhhccCCCCCCCCcccCCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcccHHHHHH
10285 Confidence 99876433 3334455666666665431000 0014677889999999999855666666776666 88888
10286
10287
10288 Q NP_000290.2 690 NLCRSSA-----SPKAAEAARLLLSDMWSSKE 716 (747)
10289 Q Consensus 690 ~LL~s~~-----d~eVr~aAL~aLsnL~~~~~ 716 (747)
10290 .++.... ++.++..++++|.+|+...+
10291 T Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~L~~l~~~~~ 232 (233)
10292 T 3TT9_A 201 HYVRGTIADYQPDDKATENCVCILHNLSYQLE 232 (233)
10293 T ss_dssp HHHHHHHHTTCTTCHHHHHHHHHHHHHCCCCC
10294 T ss_pred HHHHcccccCCCChHHHHHHHHHHHHhhhccc
10295 Confidence 8887542 46788899999999887654
10296
10297
10298 No 246
10299 >3VWA_A Cytoplasmic export protein 1; tRNA, nuclear export, HEAT repeat; 2.2A {Saccharomyces cerevisiae}
10300 Probab=93.63 E-value=0.0019 Score=68.57 Aligned_cols=152 Identities=11% Similarity=0.067 Sum_probs=108.9 Template_Neff=10.600
10301
10302 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
10303 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
10304 ..++++.++..+. +.++.++..++.+|..++...+. . . ....+++.|..++.+.++.++..++.+|..++.
10305 T Consensus 378 ~~~~~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~------~-~-~~~~ll~~l~~~l~d~~~~vR~~a~~~l~~i~~ 448 (560)
10306 T 3VWA_A 378 SSRIYPHFIQGLT-DSDATLRLQTLKTIPCIVSCLTE------R-Q-LNNELLRFLAKTQVDSDVEIRTWTVIIISKIST 448 (560)
10307 T ss_dssp CCCCHHHHHHGGG-CSSHHHHHHHHHHHHHHGGGCCH------H-C-CCCCCHHHHHHHTTCSSHHHHHHHHHHHHHHGG
10308 T ss_pred HhchHHHHHHHhc-CCCHHHHHHHHHHHHHHHhhCCH------H-H-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
10309 Confidence 3457888888887 47788999999999988864321 1 1 235678888888888889999999999999987
10310
10311
10312 Q NP_000290.2 625 HPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
10313 Q Consensus 625 ~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
10314 .... .......+++.+...+.+ .++.++..|+.+|..++.... ...+ ...+++.+..++.+. +..++..
10315 T Consensus 449 ~~~~~~~~~~~~l~~~l~~~l~d------~~~~vR~~a~~~l~~~~~~~~--~~~~-~~~ilp~l~~ll~d~-~~~VR~~ 518 (560)
10316 T 3VWA_A 449 ILSTSVGNRSNILATAFTKSLKD------PQVKPRLAALYGLEKSIELFD--VNTI-ANKILTVIAPGLLDK-SPIVRGR 518 (560)
10317 T ss_dssp GSSSCHHHHHHHHHHHHHHHHTC------SSHHHHHHHHHHHHHTGGGSC--HHHC-CCCCHHHHGGGGGCS-SHHHHHH
10318 T ss_pred HhccchhhhHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHCC--HHHH-HHHHHHHHHHHHCCC-CHHHHHH
10319 Confidence 6211 111223455666677765 378899999999999886422 1122 235688888888877 8899999
10320
10321
10322 Q NP_000290.2 704 ARLLLSDMWSSK 715 (747)
10323 Q Consensus 704 AL~aLsnL~~~~ 715 (747)
10324 |+.+|..+...-
10325 T Consensus 519 a~~~l~~i~~~l 530 (560)
10326 T 3VWA_A 519 AKILFEEYLEKL 530 (560)
10327 T ss_dssp HHHHHHHHHHHH
10328 T ss_pred HHHHHHHHHHHH
10329 Confidence 999988877543
10330
10331
10332 No 247
10333 >1XQR_A HspBP1 protein; armadillo repeat, superhelical twist, CHAPERONE; HET: MSE; 2.1A {Homo sapiens} SCOP: a.118.1.21
10334 Probab=93.61 E-value=0.0019 Score=61.69 Aligned_cols=122 Identities=15% Similarity=0.146 Sum_probs=77.8 Template_Neff=11.300
10335
10336 Q NP_000290.2 257 QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVD-LLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAV 335 (747)
10337 Q Consensus 257 sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~-lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll 335 (747)
10338 .++.++..++..|..++.. ......+...++++.++. ++...++.++..++.++.+++.........+...++++.+.
10339 T Consensus 52 ~~~~~~~~al~~L~~l~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~l~~~~~~~~l~ 130 (296)
10340 T 1XQR_A 52 ADQQEREGALELLADLCEN-MDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLL 130 (296)
10341 T ss_dssp HHHHHHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHCCCCCTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH
10342 T ss_pred CCHHHHHHHHHHHHHHHcC-HHHHHHHHHcccHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCHHHHHH
10343 Confidence 4456777788888887764 333334445566777777 77776778888999999998865443333344445777777
10344
10345
10346 Q NP_000290.2 336 SLLRRTG-NAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
10347 Q Consensus 336 ~lL~ss~-d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
10348 .++. .. ++.++..++.++.+++..... ...+.. ++++.|+.++.
10349 T Consensus 131 ~~l~-~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~~l~ 177 (296)
10350 T 1XQR_A 131 RLLD-RDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQ 177 (296)
10351 T ss_dssp HHHH-HCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
10352 T ss_pred HHHh-cCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhh
10353 Confidence 7776 33 567788888888888764322 222222 45555555543
10354
10355
10356 No 248
10357 >1XQS_B HSPBP1 protein, Heat shock 70; armadillo repeat, superhelical twist, CHAPERONE; HET: AMP; 2.9A {Homo sapiens} SCOP: a.118.1.21
10358 Probab=93.37 E-value=0.0023 Score=59.66 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=77.3 Template_Neff=11.900
10359
10360 Q NP_000290.2 257 QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVD-LLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAV 335 (747)
10361 Q Consensus 257 sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~-lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll 335 (747)
10362 .+..++..++..|..++.. ......+...++++.++. ++...+..++..++.++..++.........+...++++.+.
10363 T Consensus 36 ~~~~~~~~al~~L~~l~~~-~~~~~~~~~~~~i~~l~~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~ 114 (280)
10364 T 1XQS_B 36 ADQQEREGALELLADLCEN-MDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLL 114 (280)
10365 T ss_dssp HHHHHHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHCCCCCTSCSCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHH
10366 T ss_pred cCHHHHHHHHHHHHHHHhc-HHHHHHHHHcccHHHHHHHHhhcCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCHHHHHH
10367 Confidence 4466777888888888654 233334445567777777 77766778888899999998865443333444445777777
10368
10369
10370 Q NP_000290.2 336 SLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
10371 Q Consensus 336 ~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
10372 .++....++.++..++.++.+++..... ...+.. ++++.|+.++.
10373 T Consensus 115 ~~l~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 161 (280)
10374 T 1XQS_B 115 RLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQ 161 (280)
10375 T ss_dssp HHHHSCSCHHHHHHHHHHHHHTTSSCHHHHHHHHTTTHHHHHHHHHT
10376 T ss_pred HHhccCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHCCHHHHHHHHhh
10377 Confidence 7775222566777888888888764322 222222 44555554443
10378
10379
10380 No 249
10381 >5VOZ_P V-type proton ATPase catalytic subunit; V-ATPase, SidK, rotational state 3;{Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
10382 Probab=93.32 E-value=0.0027 Score=67.46 Aligned_cols=330 Identities=11% Similarity=0.063 Sum_probs=181.1 Template_Neff=8.900
10383
10384 Q NP_000290.2 290 CKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTN---KLETR---RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
10385 Q Consensus 290 ~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~---~~~ll---~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
10386 ..++.++.. .+.++...++.++..++...+ . ...++ ..+.++.++.++. . ++.++..++.+|..++...
10387 T Consensus 78 ~~li~LL~~~~~~d~~~~~l~~l~~ll~~~~-~~~~r~~~~~~~~~~~~~~li~lL~-~-d~~i~~~a~~~L~~L~~~~- 153 (478)
10388 T 5VOZ_P 78 IPLIHLLSTSDNEDCKKSVQNLIAELLSSDK-YGDDTVKFFQEDPKQLEQLFDVSLK-G-DFQTVLISGFNVVSLLVQN- 153 (478)
10389 T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHCSS-SCHHHHHHHHHCTHHHHHHTTSTTS-S-CHHHHHHHHHHHHHHHTSS-
10390 T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHcCCC-CccchhHHhccChhhHHHHHHHHcC-C-CHHHHHHHHHHHHHHHHhc-
10391 Confidence 556666654 466777788888888876544 3 22233 2456778888886 5 6677888888888887654
10392
10393
10394 Q NP_000290.2 363 LK-EELIA-DALPV--LADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSAD 438 (747)
10395 Q Consensus 363 ~~-~~Lve-giLe~--Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (747)
10396 .. ..... ++++. ++.+|. ++ -++++-..|..||..-+. .+
10397 T Consensus 154 ~~~~~~~~~~~l~~~~li~~L~---------~~------~~~~~~~~a~~~L~~L~~---------------------~~ 197 (478)
10398 T 5VOZ_P 154 GLHNVKLVEKLLKNNNLINILQ---------NI------EQMDTCYVCIRLLQELAV---------------------IP 197 (478)
10399 T ss_dssp SCCCHHHHHHHHSSHHHHHHHH---------CS------SCHHHHHHHHHHHHHHTT---------------------SH
10400 T ss_pred cccCcccchhhcccchHHHHHh---------cc------CCccHHHHHHHHHHHHcC---------------------Ch
10401 Confidence 32 11122 66776 777761 11 123444555555533211 11
10402
10403
10404 Q NP_000290.2 439 AGRQTMRNY-SGLIDSLMAYVQNCVAA-----------SRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYT 506 (747)
10405 Q Consensus 439 ~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (747)
10406 ..|...... .|.|..|...+.+.... ...+..-..++...|.+|++
10407 T Consensus 198 ~~r~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~~~~~~~~~~~~ql~~~a~~~L~~Ls~---------------------- 255 (478)
10408 T 5VOZ_P 198 EYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTF---------------------- 255 (478)
10409 T ss_dssp HHHHHHHHSTTSSHHHHHHHHHHHHHSCSSCCCTTTSSSHHHHHHHHHHHHHHHHHTT----------------------
10410 T ss_pred HHHHHHHHccccchHHHHHHHHhccccccccccccccCcCcCHHHHHHHHHHHHHHhc----------------------
10411 Confidence 122222221 34455555444432110 00111111222222233322
10412
10413
10414 Q NP_000290.2 507 EKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHS--DAIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMS 583 (747)
10415 Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~--G~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s 583 (747)
10416 +......+.+. ++++.|+.+++. .. +.++..++.+|.+++...+.
10417 T Consensus 256 -----------------------------~~~~~~~l~~~~~~~i~~Lv~ll~~-~~kekv~r~al~~L~nL~~~~~~-- 303 (478)
10418 T 5VOZ_P 256 -----------------------------NPVFANELVQKYLSDFLDLLKLVKI-TIKEKVSRLCISIILQCCSTRVK-- 303 (478)
10419 T ss_dssp -----------------------------SHHHHHHHHHHSHHHHGGGHHHHHH-CCCHHHHHHHHHHHHHHTSTTST--
10420 T ss_pred -----------------------------CHHHHHHHHHHhHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHhccChH--
10421 Confidence 00111223444 789999999984 44 67888899999999875321
10422
10423
10424 Q NP_000290.2 584 SG-MSQLIGLKEKGLPQIARLLQSG---NSDVVRSGASLLSNMSRH-------P------------------------LL 628 (747)
10425 Q Consensus 584 ~~-~~~~llie~giI~~Ll~LL~s~---d~eVr~~AL~aLsnLa~~-------~------------------------e~ 628 (747)
10426 .. .....+...+.+..++..|... +++++..+..++..+... + +.
10427 T Consensus 304 ~~~~~~~~l~~~~~~l~ll~~L~~~~~~d~~l~~~l~~l~~~L~~~~~~lss~dey~~el~sg~l~wsp~h~s~~f~~~n 383 (478)
10428 T 5VOZ_P 304 QHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYVAELDSKLLCWSPPHVDNGFWSDN 383 (478)
10429 T ss_dssp THHHHHHHCCCCCCHHHHHHHHTSCCCSCTHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHTCCCCCTTTTCHHHHHHH
10430 T ss_pred hcHHHHHHHHHcCCHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHcCCCCCCCCcCCcChHHHh
10431 Confidence 00 0012333444344566666543 444544433333333100 0 01
10432
10433
10434 Q NP_000290.2 629 -HRVM--GNQVFPEVTRLLTSHTGNT----SNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
10435 Q Consensus 629 -~~ll--~~giI~~Ll~LL~s~s~~~----~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
10436 ..+. ..++++.|+.+|....... ..+..++..++..|++++...+.....+.+.++++.|+.++.+. ++.++
10437 T Consensus 384 ~~~~~~~~~~~l~~Lv~lL~~~~~~~~~~~~~~~~v~~~a~~~l~~lv~~~~~~~~~l~~~g~~~~L~~Ll~~~-~~~vr 462 (478)
10438 T 5VOZ_P 384 IDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELLNHS-DSRVK 462 (478)
10439 T ss_dssp HHHHTTSSSHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHHTCHHHHHHHHTSS-CHHHH
10440 T ss_pred HHHhhhccHHHHHHHHHHHHhhhhCCCCCccccHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHhcCC-CHHHH
10441 Confidence 0111 2457788888886510000 01244577788899999665566666677778899999999877 88999
10442
10443
10444 Q NP_000290.2 702 EAARLLLSDMWSS 714 (747)
10445 Q Consensus 702 ~aAL~aLsnL~~~ 714 (747)
10446 ..|+.++.+++.+
10447 T Consensus 463 ~~Al~al~~l~~~ 475 (478)
10448 T 5VOZ_P 463 YEALKATQAIIGY 475 (478)
10449 T ss_dssp HHHHHHHHHHHHH
10450 T ss_pred HHHHHHHHHHHhh
10451 Confidence 9999999988754
10452
10453
10454 No 250
10455 >5D80_H V-type proton ATPase catalytic subunit; Hydrolase, Autoinhibition; 6.202A {Saccharomyces cerevisiae}
10456 Probab=93.32 E-value=0.0027 Score=67.46 Aligned_cols=330 Identities=11% Similarity=0.063 Sum_probs=181.1 Template_Neff=8.900
10457
10458 Q NP_000290.2 290 CKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTN---KLETR---RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE 362 (747)
10459 Q Consensus 290 ~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~---~~~ll---~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~ 362 (747)
10460 ..++.++.. .+.++...++.++..++...+ . ...++ ..+.++.++.++. . ++.++..++.+|..++...
10461 T Consensus 78 ~~li~LL~~~~~~d~~~~~l~~l~~ll~~~~-~~~~r~~~~~~~~~~~~~~li~lL~-~-d~~i~~~a~~~L~~L~~~~- 153 (478)
10462 T 5D80_H 78 IPLIHLLSTSDNEDCKKSVQNLIAELLSSDK-YGDDTVKFFQEDPKQLEQLFDVSLK-G-DFQTVLISGFNVVSLLVQN- 153 (478)
10463 T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHcCCC-CccchhHHhccChhhHHHHHHHHcC-C-CHHHHHHHHHHHHHHHHhc-
10464 Confidence 556666654 466777788888888876544 3 22233 2456778888886 5 6677888888888887654
10465
10466
10467 Q NP_000290.2 363 LK-EELIA-DALPV--LADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSAD 438 (747)
10468 Q Consensus 363 ~~-~~Lve-giLe~--Lv~LL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (747)
10469 .. ..... ++++. ++.+|. ++ -++++-..|..||..-+. .+
10470 T Consensus 154 ~~~~~~~~~~~l~~~~li~~L~---------~~------~~~~~~~~a~~~L~~L~~---------------------~~ 197 (478)
10471 T 5D80_H 154 GLHNVKLVEKLLKNNNLINILQ---------NI------EQMDTCYVCIRLLQELAV---------------------IP 197 (478)
10472 T ss_pred cccCcccchhhcccchHHHHHh---------cc------CCccHHHHHHHHHHHHcC---------------------Ch
10473 Confidence 32 11122 66776 777761 11 123444555555533211 11
10474
10475
10476 Q NP_000290.2 439 AGRQTMRNY-SGLIDSLMAYVQNCVAA-----------SRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYT 506 (747)
10477 Q Consensus 439 ~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (747)
10478 ..|...... .|.|..|...+.+.... ...+..-..++...|.+|++
10479 T Consensus 198 ~~r~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~~~~~~~~~~~~ql~~~a~~~L~~Ls~---------------------- 255 (478)
10480 T 5D80_H 198 EYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTF---------------------- 255 (478)
10481 T ss_pred HHHHHHHHccccchHHHHHHHHhccccccccccccccCcCcCHHHHHHHHHHHHHHhc----------------------
10482 Confidence 122222221 34455555444432110 00111111222222233322
10483
10484
10485 Q NP_000290.2 507 EKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHS--DAIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMS 583 (747)
10486 Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~lve~--G~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s 583 (747)
10487 +......+.+. ++++.|+.+++. .. +.++..++.+|.+++...+.
10488 T Consensus 256 -----------------------------~~~~~~~l~~~~~~~i~~Lv~ll~~-~~kekv~r~al~~L~nL~~~~~~-- 303 (478)
10489 T 5D80_H 256 -----------------------------NPVFANELVQKYLSDFLDLLKLVKI-TIKEKVSRLCISIILQCCSTRVK-- 303 (478)
10490 T ss_pred -----------------------------CHHHHHHHHHHhHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHhccChH--
10491 Confidence 00111223444 789999999984 44 67888899999999875321
10492
10493
10494 Q NP_000290.2 584 SG-MSQLIGLKEKGLPQIARLLQSG---NSDVVRSGASLLSNMSRH-------P------------------------LL 628 (747)
10495 Q Consensus 584 ~~-~~~~llie~giI~~Ll~LL~s~---d~eVr~~AL~aLsnLa~~-------~------------------------e~ 628 (747)
10496 .. .....+...+.+..++..|... +++++..+..++..+... + +.
10497 T Consensus 304 ~~~~~~~~l~~~~~~l~ll~~L~~~~~~d~~l~~~l~~l~~~L~~~~~~lss~dey~~el~sg~l~wsp~h~s~~f~~~n 383 (478)
10498 T 5D80_H 304 QHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYVAELDSKLLCWSPPHVDNGFWSDN 383 (478)
10499 T ss_pred hcHHHHHHHHHcCCHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHcCCCCCCCCcCCcChHHHh
10500 Confidence 00 0012333444344566666543 444544433333333100 0 01
10501
10502
10503 Q NP_000290.2 629 -HRVM--GNQVFPEVTRLLTSHTGNT----SNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAA 701 (747)
10504 Q Consensus 629 -~~ll--~~giI~~Ll~LL~s~s~~~----~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr 701 (747)
10505 ..+. ..++++.|+.+|....... ..+..++..++..|++++...+.....+.+.++++.|+.++.+. ++.++
10506 T Consensus 384 ~~~~~~~~~~~l~~Lv~lL~~~~~~~~~~~~~~~~v~~~a~~~l~~lv~~~~~~~~~l~~~g~~~~L~~Ll~~~-~~~vr 462 (478)
10507 T 5D80_H 384 IDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELLNHS-DSRVK 462 (478)
10508 T ss_pred HHHhhhccHHHHHHHHHHHHhhhhCCCCCccccHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHhcCC-CHHHH
10509 Confidence 0111 2457788888886510000 01244577788899999665566666677778899999999877 88999
10510
10511
10512 Q NP_000290.2 702 EAARLLLSDMWSS 714 (747)
10513 Q Consensus 702 ~aAL~aLsnL~~~ 714 (747)
10514 ..|+.++.+++.+
10515 T Consensus 463 ~~Al~al~~l~~~ 475 (478)
10516 T 5D80_H 463 YEALKATQAIIGY 475 (478)
10517 T ss_pred HHHHHHHHHHHhh
10518 Confidence 9999999988754
10519
10520
10521 No 251
10522 >1F59_B IMPORTIN BETA-1/FXFG NUCLEOPORIN; Protein-protein complex, TRANSPORT PROTEIN RECEPTOR; 2.8A {Homo sapiens} SCOP: a.118.1.1
10523 Probab=93.26 E-value=0.0024 Score=62.21 Aligned_cols=154 Identities=10% Similarity=0.056 Sum_probs=84.6 Template_Neff=12.900
10524
10525 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLM------------SSGMSQLIG---LKEKGLPQIARLLQSG------ 607 (747)
10526 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~------------s~~~~~~ll---ie~giI~~Ll~LL~s~------ 607 (747)
10527 ++.++.++. +.++.++..++.++..++...... ......... .-..+++.+...+...
10528 T Consensus 261 ~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~ 339 (442)
10529 T 1F59_B 261 FAITIEAMK-SDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDD 339 (442)
10530 T ss_dssp HHHHHHHHH-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCCCCCS
10531 T ss_pred HHHHHHHhc-CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHHHHHHHHHccCCCCCCC
10532 Confidence 455666666 356677777888887776531000 000000000 0122344444444332
10533
10534
10535 Q NP_000290.2 608 -NSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSML 685 (747)
10536 Q Consensus 608 -d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL 685 (747)
10537 +..++..+..++..+...... .....+++.+...+.+ .++.++..++.++..+....+. ...... ..++
10538 T Consensus 340 ~~~~~r~~a~~~l~~l~~~~~~--~~~~~~~~~l~~~l~~------~~~~~r~~al~~l~~l~~~~~~~~~~~~~-~~~~ 410 (442)
10539 T 1F59_B 340 DDWNPCKAAGVCLMLLATCCED--DIVPHVLPFIKEHIKN------PDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAM 410 (442)
10540 T ss_dssp SCCCHHHHHHHHHHHHHHHSTT--THHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHTSSSCHHHHHHHH-HTTH
10541 T ss_pred CCCcHHHHHHHHHHHHHHhccc--ccHHhHHHHHHHHhcC------CChHHHHHHHHHHHHHHhCCCHHHHHHHH-HHHH
10542 Confidence 345667777777777654111 1112244445555544 3677888999999988865332 111111 2456
10543
10544
10545 Q NP_000290.2 686 NNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
10546 Q Consensus 686 ~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
10547 +.+...+.+. ++.++..++++|..++.
10548 T Consensus 411 ~~l~~~l~d~-~~~vr~~a~~~l~~l~~ 437 (442)
10549 T 1F59_B 411 PTLIELMKDP-SVVVRDTAAWTVGRICE 437 (442)
10550 T ss_dssp HHHHHHTTCS-CSHHHHHHHHHHHHHHH
10551 T ss_pred HHHHHHhcCC-CHHHHHHHHHHHHHHHH
10552 Confidence 6677777665 78899999999988764
10553
10554
10555 No 252
10556 >6XTE_A Importin-5, antipain; human karyopherin, PA-PB1 sub-complex nuclear; HET: FC0, OAR; 2.27A {Homo sapiens}
10557 Probab=93.23 E-value=0.0025 Score=70.44 Aligned_cols=153 Identities=9% Similarity=0.114 Sum_probs=85.8 Template_Neff=12.900
10558
10559 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
10560 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
10561 .++.+...+. +.++.++..++.++..++..... .... .-..+++.+...+.+.++.++..++.++..++.. .
10562 T Consensus 358 l~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 430 (1096)
10563 T 6XTE_A 358 IKEHIMQMLQ-NPDWKYRHAGLMALSAIGEGCHQ-----QMEG-ILNEIVNFVLLFLQDPHPRVRYAACNAVGQMATDFA 430 (1096)
10564 T ss_dssp HHHHHHHHHT-CSSHHHHHHHHHHHHHTHHHHTT-----TTTT-THHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHTT
10565 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhhHH-----HHHH-HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcc
10566 Confidence 3444555555 35677788888888887764221 0111 1134566677777777888999999999998865 2
10567
10568
10569 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINL--------CRSSA 696 (747)
10570 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~L--------L~s~~ 696 (747)
10571 .. .......+++.+...+.+. .+..++..++.+|..++...+. .....+ ..++..+... +.+.
10572 T Consensus 431 ~~~~~~~~~~~~~~l~~~l~~~-----~~~~v~~~a~~~l~~l~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~- 503 (1096)
10573 T 6XTE_A 431 PGFQKKFHEKVIAALLQTMEDQ-----GNQRVQAHAAAALINFTEDCPKSLLIPYL-DNLVKHLHSIMVLKLQELIQKG- 503 (1096)
10574 T ss_dssp THHHHHHHHHHHHHHHHHHHTC-----SCHHHHHHHHHHHHHHHHTSCHHHHGGGH-HHHHHHHHHHHHHHHHHHHHTC-
10575 T ss_pred HHHHHHHHHHHHHHHHHHhccc-----CCHHHHHHHHHHHHHHhccCCHHhHHHHH-HHHHHHHHHHHHHHHHHHHHcC-
10576 Confidence 11 1111233555566655541 2467788888888888764322 111111 1223333322 2222
10577
10578
10579 Q NP_000290.2 697 SPKAAEAARLLLSDMWSS 714 (747)
10580 Q Consensus 697 d~eVr~aAL~aLsnL~~~ 714 (747)
10581 +..++..++.++..++..
10582 T Consensus 504 ~~~~~~~~~~~l~~l~~~ 521 (1096)
10583 T 6XTE_A 504 TKLVLEQVVTSIASVADT 521 (1096)
10584 T ss_dssp CCHHHHHHHHHHHHHHHH
10585 T ss_pred CHhHHHHHHHHHHHHHHH
10586 Confidence 456677777777766643
10587
10588
10589 No 253
10590 >4HXT_A De Novo Protein OR329; Structural Genomics, PSI-Biology, Protein Structure; 1.95A {artificial gene}
10591 Probab=93.20 E-value=0.0025 Score=56.21 Aligned_cols=134 Identities=25% Similarity=0.298 Sum_probs=86.9 Template_Neff=13.200
10592
10593 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
10594 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
10595 +++.+...+.+.+..++..++.++.+++...+.....+...++++.+...+.+.++.++..++.++..++..........
10596 T Consensus 87 ~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 166 (252)
10597 T 4HXT_A 87 GVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 166 (252)
10598 T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
10599 T ss_pred hHHHHHHHccCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhhCCCHHHHHHHHHHHHHHHcCCHHHHHHH
10600 Confidence 44556666666677788888999988876543333333334567777777776677888889999988876543332333
10601
10602
10603 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIA-DALPVLADRVI 380 (747)
10604 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~-~~~Lve-giLe~Lv~LL~ 380 (747)
10605 ...++++.+...+. ..++.++..++.++..++..... ...+.. ++++.+..++.
10606 T Consensus 167 ~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 222 (252)
10607 T 4HXT_A 167 VDAGGVEVLVKLLT-STDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLT 222 (252)
10608 T ss_dssp HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHHHGGG
10609 T ss_pred HHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhc
10610 Confidence 33456777777776 55677888889999888864322 222223 56666666654
10611
10612
10613 No 254
10614 >5IFE_C Splicing factor 3B subunit 5; pre-mRNA splicing, U2 snRNP, essential; 3.1A {Homo sapiens}
10615 Probab=93.19 E-value=0.0029 Score=75.01 Aligned_cols=153 Identities=10% Similarity=0.044 Sum_probs=93.2 Template_Neff=9.800
10616
10617 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
10618 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
10619 +++.|...+. +.+..++..++.+|..++..... . .... ....++..|...+.+.++.++..++.+|..++....
10620 T Consensus 932 l~~~L~~~L~-~~~~~vR~~A~~~L~~l~~~~~~---~-~~~~-~~~~l~~~L~~~L~d~~~~vr~~al~aL~~l~~~~~ 1005 (1304)
10621 T 5IFE_C 932 ICGTVLWRLN-NKSAKVRQQAADLISRTAVVMKT---C-QEEK-LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 1005 (1304)
10622 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhccC---c-CHHH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhC
10623 Confidence 4566666676 46678888999999988754221 0 0011 123456677777777777888888888888876521
10624
10625
10626 Q NP_000290.2 628 L---HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
10627 Q Consensus 628 ~---~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
10628 . ...+ ..+++.|..++.+ .+..++..++.+|..++...+.....-.-..++..++..+.+. +..++..+
10629 T Consensus 1006 ~~~l~~~l-~~ll~~L~~~L~~------~~~~Vr~~ai~~L~~i~~~~~~~~~~~~~~~il~~Ll~~l~~~-~~~vr~~a 1077 (1304)
10630 T 5IFE_C 1006 MHKMTPPI-KDLLPRLTPILKN------RHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAH-KKAIRRAT 1077 (1304)
10631 T ss_pred hHHhcccH-HhHHHHHHHHhCC------CCHHHHHHHHHHHHHHHhcCcccCCHHHHHhhHHHHHHHccCC-CHHHHHHH
10632 Confidence 1 1112 2456666677665 3577888899999888764322111000012344455555544 66788888
10633
10634
10635 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
10636 Q Consensus 705 L~aLsnL~~~ 714 (747)
10637 +.+|..++..
10638 T Consensus 1078 ~~~L~~l~~~ 1087 (1304)
10639 T 5IFE_C 1078 VNTFGYIAKA 1087 (1304)
10640 T ss_pred HHHHHHHHHH
10641 Confidence 8888877653
10642
10643
10644 No 255
10645 >6AHD_1 Pre-mRNA-processing-splicing factor 8, Thioredoxin-like protein; Spliceosome, SPLICING; HET: IHP, GTP; 3.8A {Homo sapiens}
10646 Probab=93.19 E-value=0.0029 Score=75.01 Aligned_cols=153 Identities=10% Similarity=0.044 Sum_probs=93.2 Template_Neff=9.800
10647
10648 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
10649 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
10650 +++.|...+. +.+..++..++.+|..++..... . .... ....++..|...+.+.++.++..++.+|..++....
10651 T Consensus 932 l~~~L~~~L~-~~~~~vR~~A~~~L~~l~~~~~~---~-~~~~-~~~~l~~~L~~~L~d~~~~vr~~al~aL~~l~~~~~ 1005 (1304)
10652 T 6AHD_1 932 ICGTVLWRLN-NKSAKVRQQAADLISRTAVVMKT---C-QEEK-LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 1005 (1304)
10653 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhccC---c-CHHH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhC
10654 Confidence 4566666676 46678888999999988754221 0 0011 123456677777777777888888888888876521
10655
10656
10657 Q NP_000290.2 628 L---HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
10658 Q Consensus 628 ~---~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
10659 . ...+ ..+++.|..++.+ .+..++..++.+|..++...+.....-.-..++..++..+.+. +..++..+
10660 T Consensus 1006 ~~~l~~~l-~~ll~~L~~~L~~------~~~~Vr~~ai~~L~~i~~~~~~~~~~~~~~~il~~Ll~~l~~~-~~~vr~~a 1077 (1304)
10661 T 6AHD_1 1006 MHKMTPPI-KDLLPRLTPILKN------RHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAH-KKAIRRAT 1077 (1304)
10662 T ss_pred hHHhcccH-HhHHHHHHHHhCC------CCHHHHHHHHHHHHHHHhcCcccCCHHHHHhhHHHHHHHccCC-CHHHHHHH
10663 Confidence 1 1112 2456666677665 3577888899999888764322111000012344455555544 66788888
10664
10665
10666 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
10667 Q Consensus 705 L~aLsnL~~~ 714 (747)
10668 +.+|..++..
10669 T Consensus 1078 ~~~L~~l~~~ 1087 (1304)
10670 T 6AHD_1 1078 VNTFGYIAKA 1087 (1304)
10671 T ss_pred HHHHHHHHHH
10672 Confidence 8888877653
10673
10674
10675 No 256
10676 >6QH5_B AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
10677 Probab=93.12 E-value=0.0027 Score=64.56 Aligned_cols=146 Identities=10% Similarity=-0.008 Sum_probs=87.6 Template_Neff=12.900
10678
10679 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
10680 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
10681 +++.++..+....++.++..++.+|..+..... . ....++.+...+.+.+..++..++.++..+.....
10682 T Consensus 428 ~~~~l~~~l~~~~~~~vr~~a~~~l~~~~~~~~-------~----~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 496 (592)
10683 T 6QH5_B 428 IIATLCENLDSLDEPDARAAMIWIVGEYAERID-------N----ADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKP 496 (592)
10684 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCC-------C----hhhHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCC
10685 Confidence 556666666522456777788888887765311 0 13456667777777778899999999998876521
10686
10687
10688 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
10689 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
10690 .. +...+...+..++.+. .++.++..+..++..+.... ......+. ..++.++..+.+. ++.++..++.+
10691 T Consensus 497 ~~--~~~~l~~~l~~~~~~~-----~~~~vr~~a~~~l~~l~~~~-~~~~~~~~-~~~~~l~~~~~~~-~~~~~~~~~~~ 566 (592)
10692 T 6QH5_B 497 SE--TQELVQQVLSLATQDS-----DNPDLRDRGYIYWRLLSTDP-VTAKEVVL-SEKPLISEETDLI-EPTLLDELICH 566 (592)
10693 T ss_pred HH--hhhhhHHHHHHHcCCC-----CCHHHHHHHHHHHHHHhcCc-hhhHHHHH-hhHHHHHHHcCCC-CHHHHHHHHHH
10694 Confidence 10 1111222222323331 25678888888888876542 21112221 2356666666555 67888888888
10695
10696
10697 Q NP_000290.2 708 LSDMWSS 714 (747)
10698 Q Consensus 708 LsnL~~~ 714 (747)
10699 |..+...
10700 T Consensus 567 l~~l~~~ 573 (592)
10701 T 6QH5_B 567 IGSLASV 573 (592)
10702 T ss_pred HHHHHHH
10703 Confidence 8877653
10704
10705
10706 No 257
10707 >6EN4_C Splicing factor 3B subunit 3; Protein complex, splicing modulator, SPLICING; HET: BGZ; 3.08A {Homo sapiens}
10708 Probab=92.93 E-value=0.0031 Score=67.35 Aligned_cols=154 Identities=10% Similarity=0.023 Sum_probs=91.5 Template_Neff=12.900
10709
10710 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
10711 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
10712 .++.+...+. +.++.++..++.++..++..... . .... ....+++.+...+.+.++.++..++.++..++....
10713 T Consensus 480 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~~ 553 (852)
10714 T 6EN4_C 480 ICGTVLWRLN-NKSAKVRQQAADLISRTAVVMKT---C-QEEK-LMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG 553 (852)
10715 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhChh---h-cCHH-HHHhHHHHHHHHccCCCHHHHHHHHHHHHHHHHhhC
10716 Confidence 4556666666 46677888899999888764221 0 0001 123566777777777778888889999988876521
10717
10718
10719 Q NP_000290.2 628 L--HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
10720 Q Consensus 628 ~--~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
10721 . .......+++.+...+.+ .++.++..++.++..++...+...........+..++..+.+. +..++..++
10722 T Consensus 554 ~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a~ 626 (852)
10723 T 6EN4_C 554 MHKMTPPIKDLLPRLTPILKN------RHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAH-KKAIRRATV 626 (852)
10724 T ss_pred chhchhhHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhhCHHHCCHHHHHhcHHHHHHHhcCC-CHHHHHHHH
10725 Confidence 1 111112355666666655 3567888888888888764322111000012344455555444 566777777
10726
10727
10728 Q NP_000290.2 706 LLLSDMWSS 714 (747)
10729 Q Consensus 706 ~aLsnL~~~ 714 (747)
10730 .++..+...
10731 T Consensus 627 ~~l~~l~~~ 635 (852)
10732 T 6EN4_C 627 NTFGYIAKA 635 (852)
10733 T ss_pred HHHHHHHHH
10734 Confidence 777777643
10735
10736
10737 No 258
10738 >6SA6_A DARPin-Armadillo fusion A5; protein fusion, DARPin, Armadillo, shared; HET: EDO; 1.6A {synthetic construct}
10739 Probab=92.89 E-value=0.0032 Score=61.05 Aligned_cols=112 Identities=26% Similarity=0.312 Sum_probs=76.5 Template_Neff=12.400
10740
10741 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
10742 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
10743 +++.+...+...++.++..++.+|.+++.........+...++++.+..++...+..++..++.++..++.........+
10744 T Consensus 284 ~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 363 (397)
10745 T 6SA6_A 284 ALPALVQLLSSPNEQILQEALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWTLGNIASGGNEQKQAV 363 (397)
10746 T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHH
10747 T ss_pred hHHHHHHHhcCCcHHHHHHHHHHHHHHhcCcHHHHHHHHhcChHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHH
10748 Confidence 45556666666667788888888888876544333334445677788888877777888899999998886434333334
10749
10750
10751 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
10752 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
10753 ...++++.+..++. ..++.++..++.++..++
10754 T Consensus 364 ~~~~~~~~l~~~l~-~~~~~v~~~a~~~l~~l~ 395 (397)
10755 T 6SA6_A 364 KEAGALEKLEQLQS-HENEKIQKEAQEALEKLQ 395 (397)
10756 T ss_dssp HHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHH
10757 T ss_pred HHcCchHHHHHHHh-cccHHHHHHHHHHHHHHh
10758 Confidence 44456777777776 456677777887777665
10759
10760
10761 No 259
10762 >6FT5_A A3_A3; alphaRep, artificial protein, chimera, bidomain; HET: GOL, SO4; 1.94A {synthetic construct}
10763 Probab=92.89 E-value=0.0032 Score=60.70 Aligned_cols=91 Identities=14% Similarity=0.155 Sum_probs=53.6 Template_Neff=12.800
10764
10765 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
10766 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
10767 ..++.+...+.+.+..++..++..+..+.. ...++.+...+.+.++.++..++..+..+..
10768 T Consensus 23 ~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~-----------~~~~~~l~~~l~~~~~~vr~~a~~~L~~~~~-------- 83 (409)
10769 T 6FT5_A 23 EKVEMYIKNLQDDSYYVRRAAAYALGKIGD-----------ERAVEPLIKALKDEDAWVRRAAADALGQIGD-------- 83 (409)
10770 T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHhcC-----------cchHHHHHHHhcCCCHHHHHHHHHHHHHHcC--------
10771 Confidence 445556666666667777777777766643 1234445555556666777777777766543
10772
10773
10774 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
10775 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
10776 ...++.+...+. +.++.++..++.++..+.
10777 T Consensus 84 ---~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~ 113 (409)
10778 T 6FT5_A 84 ---ERAVEPLIKALK-DEDGWVRQSAAVALGQIG 113 (409)
10779 T ss_pred ---chhHHHHHHHhc-CCCHHHHHHHHHHHHhhC
10780 Confidence 123344455554 445566666666666554
10781
10782
10783 No 260
10784 >3C5W_A PP2A A subunit, PP2A C; methylesterase, phosphatase, PP2A, HYDROLASE; 2.8A {Homo sapiens}
10785 Probab=92.86 E-value=0.0032 Score=54.65 Aligned_cols=146 Identities=11% Similarity=0.041 Sum_probs=96.0 Template_Neff=13.200
10786
10787 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
10788 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
10789 .++.+...+. +.++.++..++.++..++..... .. ....+++.+...+.+.++.++..++.++..+.....
10790 T Consensus 86 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-------~~-~~~~~~~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~ 156 (232)
10791 T 3C5W_A 86 LNSLCMAWLV-DHVYAIREAATSNLKKLVEKFGK-------EW-AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG 156 (232)
10792 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHCH-------HH-CCCCCHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHH
10793 T ss_pred HHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHhCh-------hH-HHhcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhC
10794 Confidence 4566666776 46677888899998888764221 11 123566777777777778888899999988876521
10795
10796
10797 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
10798 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
10799 .. .....+++.+...+.+ .++.++..++.++..+....+. ......+++.+..++.+. ++.++..++.+
10800 T Consensus 157 ~~-~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~---~~~~~~~~~~l~~~~~~~-~~~vr~~a~~~ 225 (232)
10801 T 3C5W_A 157 QD-ITTKHMLPTVLRMAGD------PVANVRFNVAKSLQKIGPILDN---STLQSEVKPILEKLTQDQ-DVDVKYFAQEA 225 (232)
10802 T ss_dssp HH-HHHHHTHHHHHHGGGC------SSHHHHHHHHHHHHHHGGGSCH---HHCCCCCHHHHHHHHTCS-SHHHHHHHHHH
10803 T ss_pred hh-ccHhcHHHHHHHHhCC------CcHHHHHHHHHHHHHHHHHcCc---hHHHHHHHHHHHHHHhcC-CHHHHHHHHHH
10804 Confidence 11 1122355666666665 3678888999999988764221 112234566777777765 77889989888
10805
10806
10807 Q NP_000290.2 708 LSDMWS 713 (747)
10808 Q Consensus 708 LsnL~~ 713 (747)
10809 |..++.
10810 T Consensus 226 l~~l~~ 231 (232)
10811 T 3C5W_A 226 LTVLSL 231 (232)
10812 T ss_dssp HHHTTC
10813 T ss_pred HHHHhc
10814 Confidence 887753
10815
10816
10817 No 261
10818 >4LAC_A Serine/threonine-protein phosphatase 2A activator (E.C.5.2.1.8); PP2A, PTPA, protein phosphatase, signaling; HET: AGS, MES; 2.82A {Homo sapiens}
10819 Probab=92.86 E-value=0.0033 Score=56.30 Aligned_cols=110 Identities=11% Similarity=0.093 Sum_probs=66.6 Template_Neff=12.800
10820
10821 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
10822 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
10823 ..+.++.|+..+. +.++.++..++.+|..+...... . . ....+++.+...+.+.++.++..++.+|..+..
10824 T Consensus 31 ~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~vr~~~~~~l~~~~~ 101 (258)
10825 T 4LAC_A 31 SLYPIAVLIDELR-NEDVQLRLNSIKKLSTIALALGV------E-R-TRSELLPFIVELAEDAKWRVRLAIIEYMPLLAG 101 (258)
10826 T ss_pred cccHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHccCH------H-H-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
10827 Confidence 3456777788887 46778888888888888754221 1 1 123456667777777777888888888887765
10828
10829
10830 Q NP_000290.2 625 HPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
10831 Q Consensus 625 ~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
10832 .... ......+++.+..++.+ .++.++..++.+|..++.
10833 T Consensus 102 ~~~~-~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~ 140 (258)
10834 T 4LAC_A 102 QLGV-EYFDEKLNSLCMAWLVD------HVYAIREAATSNLKKLVE 140 (258)
10835 T ss_pred hCCC-hHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
10836 Confidence 4111 00112234444455444 245666666666666654
10837
10838
10839 No 262
10840 >4FDD_A Transportin-1, RNA-binding protein FUS; HEAT repeats, Karyopherin, nuclear import; 2.3A {Homo sapiens}
10841 Probab=92.57 E-value=0.0039 Score=65.83 Aligned_cols=150 Identities=10% Similarity=0.046 Sum_probs=86.4 Template_Neff=13.300
10842
10843 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
10844 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
10845 .++.+...+. +.++.++..++.++..++..... .... ....+++.+...+.+.++.++..++.++..++.. .
10846 T Consensus 360 ~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~v~~~~~~~l~~~~~~~~ 432 (852)
10847 T 4FDD_A 360 ILPLLKELLF-HHEWVVKESGILVLGAIAEGCMQ-----GMIP-YLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVV 432 (852)
10848 T ss_dssp HHHHHHHHHT-CSSHHHHHHHHHHHHHTTTTTHH-----HHGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHH
10849 T ss_pred HHHHHHHHHh-CCChHHHHHHHHHHHHHHHHHHH-----hhHH-hHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhc
10850 Confidence 3444555555 35667777888888888764321 1111 1234666777777777788889999999888764 1
10851
10852
10853 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
10854 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
10855 .. .......+++.+...+.+ .++.++..++.++..++........... ..++..+...+.+. +..++..++
10856 T Consensus 433 ~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~~~~~~~ 504 (852)
10857 T 4FDD_A 433 SQPPDTYLKPLMTELLKRILD------SNKRVQEAACSAFATLEEEACTELVPYL-AYILDTLVFAFSKY-QHKNLLILY 504 (852)
10858 T ss_dssp HSCTTTTHHHHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHHGGGGGGGH-HHHHHHHHHHHHHC-CHHHHHHHH
10859 T ss_pred CCCCCcchHHHHHHHHHHHHc------CCHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHhhcc-CHHHHHHHH
10860 Confidence 11 011112344555555554 2567888888888888764322111111 23455555555544 445566666
10861
10862
10863 Q NP_000290.2 706 LLLSDMW 712 (747)
10864 Q Consensus 706 ~aLsnL~ 712 (747)
10865 .+|..++
10866 T Consensus 505 ~~l~~l~ 511 (852)
10867 T 4FDD_A 505 DAIGTLA 511 (852)
10868 T ss_dssp HHHHHHH
10869 T ss_pred HHHHHHH
10870 Confidence 6666665
10871
10872
10873 No 263
10874 >5NR4_A CLIP-associating protein 2; Microtubules, TOG domain, Tubulin, Structural; 1.198A {Homo sapiens}
10875 Probab=92.57 E-value=0.004 Score=54.44 Aligned_cols=148 Identities=8% Similarity=0.066 Sum_probs=97.5 Template_Neff=12.900
10876
10877 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
10878 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
10879 .++.+...+. +.++.++..++.++..++..... .... ....+++.+...+.+.+..++..++.++..++....
10880 T Consensus 53 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 125 (230)
10881 T 5NR4_A 53 TVDALTGWVG-SSNYRVSLMGLEILSAFVDRLST-----RFKS-YVAMVIVALIDRMGDAKDKVRDEAQTLILKLMDQVA 125 (230)
10882 T ss_dssp HHHHHHHHHH-CSSHHHHHHHHHHHHHHHHHHGG-----GGGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHTS
10883 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHhhH-----HHHH-HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHcCC
10884 Confidence 5566667776 46778888999999988764321 1111 123567777777777777888889999888875421
10885
10886
10887 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
10888 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
10889 . ...+++.+...+.+ .++.++..++.++..++........ ....+++.+...+.+. ++.++..++.+
10890 T Consensus 126 ~----~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~--~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 192 (230)
10891 T 5NR4_A 126 P----PMYIWEQLASGFKH------KNFRSREGVCLCLIETLNIFGAQPL--VISKLIPHLCILFGDS-NSQVRDAAILA 192 (230)
10892 T ss_dssp C----HHHHHHHHGGGGGC------SCHHHHHHHHHHHHHHHHHHCSTTS--CHHHHHHHHHHHTTCS-SHHHHHHHHHH
10893 T ss_pred C----HHHHHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHhCCCcc--cHHHHHHHHHHHHCCC-CHHHHHHHHHH
10894 Confidence 1 11244555555554 3677888889998888764322211 1124567777777766 78899999999
10895
10896
10897 Q NP_000290.2 708 LSDMWSSK 715 (747)
10898 Q Consensus 708 LsnL~~~~ 715 (747)
10899 +..+....
10900 T Consensus 193 l~~l~~~~ 200 (230)
10901 T 5NR4_A 193 IVEIYRHV 200 (230)
10902 T ss_dssp HHHHHHHH
10903 T ss_pred HHHHHHHH
10904 Confidence 98887543
10905
10906
10907 No 264
10908 >3C5W_A PP2A A subunit, PP2A C; methylesterase, phosphatase, PP2A, HYDROLASE; 2.8A {Homo sapiens}
10909 Probab=92.51 E-value=0.0041 Score=53.94 Aligned_cols=107 Identities=12% Similarity=0.133 Sum_probs=62.9 Template_Neff=13.200
10910
10911 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
10912 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
10913 .++.++..+. +.++.++..++..|..+...... . . ....+++.+...+.+.++.++..++.++..++....
10914 T Consensus 8 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~vr~~~~~~l~~l~~~~~ 78 (232)
10915 T 3C5W_A 8 PIAVLIDELR-NEDVQLRLNSIKKLSTIALALGV------E-R-LSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLG 78 (232)
10916 T ss_dssp HHHHHHHHHT-CSSHHHHHHHHTTHHHHHHHHCS------S-H-CCCCCHHHHHHHTTCSSHHHHHHHHTTHHHHHHHHC
10917 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhCh------H-H-HHHhHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhC
10918 Confidence 4566777776 46677888888888887754221 1 1 123556667777777777788888888887765411
10919
10920
10921 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
10922 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
10923 .. .....+++.+...+.+ .++.++..++.++..++.
10924 T Consensus 79 ~~-~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~ 114 (232)
10925 T 3C5W_A 79 VE-FFDEKLNSLCMAWLVD------HVYAIREAATSNLKKLVE 114 (232)
10926 T ss_dssp GG-GTTTTHHHHHHHHTTC------SSHHHHHHHHHHHHHHHH
10927 T ss_pred HH-HHHHHHHHHHHHHHhC------CCHHHHHHHHHHHHHHHH
10928 Confidence 10 1111234444444444 245566666666666554
10929
10930
10931 No 265
10932 >6XU2_A Importin-5, antipain; human karyopherin, PA-PB1 sub-complex nuclear; HET: FC0, OAR; 2.834A {Homo sapiens}
10933 Probab=92.50 E-value=0.0042 Score=68.79 Aligned_cols=152 Identities=9% Similarity=0.112 Sum_probs=85.0 Template_Neff=12.800
10934
10935 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
10936 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
10937 .++.+...+. +.++.++..++.++..++..... .... .-..+++.+...+.+.++.++..++.++..++.. .
10938 T Consensus 377 l~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 449 (1115)
10939 T 6XU2_A 377 IKEHIMQMLQ-NPDWKYRHAGLMALSAIGEGCHQ-----QMEG-ILNEIVNFVLLFLQDPHPRVRYAACNAVGQMATDFA 449 (1115)
10940 T ss_dssp HHHHHHHHHS-SSCSHHHHHHHHHHHHHHHHHHH-----HHTT-THHHHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTT
10941 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhhHH-----HHHH-HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcc
10942 Confidence 3444555555 35677788888888887764221 0111 1134566677777777888999999999988865 1
10943
10944
10945 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINL--------CRSSA 696 (747)
10946 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~L--------L~s~~ 696 (747)
10947 .. .......+++.+...+.+. .+..++..++.+|..++...+. .....+ ..++..+... +.+.
10948 T Consensus 450 ~~~~~~~~~~~~~~l~~~l~~~-----~~~~vr~~a~~~l~~l~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~- 522 (1115)
10949 T 6XU2_A 450 PGFQKKFHEKVIAALLQTMEDQ-----GNQRVQAHAAAALINFTEDCPKSLLIPYL-DNLVKHLHSIMVLKLQELIQKG- 522 (1115)
10950 T ss_dssp THHHHHHHHHHHHHHHHHHHTT-----CCHHHHHHHHHHHHHHHHTSCHHHHGGGH-HHHHHHHHHHHHHHHHHHHHTC-
10951 T ss_pred HHHHHHHHHHHHHHHHHHhccc-----CCHHHHHHHHHHHHHHhccCCHHhHHHHH-HHHHHHHHHHHHHHHHHHHHcC-
10952 Confidence 11 1111223555566555431 2567788888888888764322 111111 1223333322 2222
10953
10954
10955 Q NP_000290.2 697 SPKAAEAARLLLSDMWS 713 (747)
10956 Q Consensus 697 d~eVr~aAL~aLsnL~~ 713 (747)
10957 +..++..++.++..++.
10958 T Consensus 523 ~~~~~~~~~~~l~~l~~ 539 (1115)
10959 T 6XU2_A 523 TKLVLEQVVTSIASVAD 539 (1115)
10960 T ss_dssp CCHHHHHHHHHHHHHHH
10961 T ss_pred CHhHHHHHHHHHHHHHH
10962 Confidence 45566667777766654
10963
10964
10965 No 266
10966 >4LAC_A Serine/threonine-protein phosphatase 2A activator (E.C.5.2.1.8); PP2A, PTPA, protein phosphatase, signaling; HET: AGS, MES; 2.82A {Homo sapiens}
10967 Probab=92.46 E-value=0.0043 Score=55.46 Aligned_cols=146 Identities=11% Similarity=0.041 Sum_probs=96.3 Template_Neff=12.800
10968
10969 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
10970 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
10971 .++.+..++. +.++.++..++.+|..++..... .. ....+++.+...+.+.+..++..++.++..+.....
10972 T Consensus 112 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~-------~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 182 (258)
10973 T 4LAC_A 112 LNSLCMAWLV-DHVYAIREAATSNLKKLVEKFGK-------EW-AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG 182 (258)
10974 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHcCCh-------hH-HHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHHcCC
10975 Confidence 4566666776 46678888899999888764221 11 234567777777777778889999999888876521
10976
10977
10978 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
10979 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
10980 .. .....+++.+...+.+ .++.++..++.+|..+...... ......+++.+..++.+. ++.++..++.+
10981 T Consensus 183 ~~-~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 251 (258)
10982 T 4LAC_A 183 QD-ITTKHMLPTVLRMAGD------PVANVRFNVAKSLQKIGPILDN---STLQSEVKPILEKLTQDQ-DVDVKYFAQEA 251 (258)
10983 T ss_pred CC-ccHhhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhCc---chhHHHHHHHHHHHHCCC-CHHHHHHHHHH
10984 Confidence 11 1122355666666665 3678888999999888754221 112234566677777765 77888899888
10985
10986
10987 Q NP_000290.2 708 LSDMWS 713 (747)
10988 Q Consensus 708 LsnL~~ 713 (747)
10989 |..+..
10990 T Consensus 252 l~~l~~ 257 (258)
10991 T 4LAC_A 252 LTVLSL 257 (258)
10992 T ss_pred HHHHHh
10993 Confidence 887753
10994
10995
10996 No 267
10997 >6EN4_C Splicing factor 3B subunit 3; Protein complex, splicing modulator, SPLICING; HET: BGZ; 3.08A {Homo sapiens}
10998 Probab=92.45 E-value=0.0043 Score=66.18 Aligned_cols=147 Identities=10% Similarity=0.006 Sum_probs=89.0 Template_Neff=12.900
10999
11000 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
11001 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
11002 .+++.++..+. +.+..++..++.++..+....+. ....+ -..+++.+...+.+.+..++..++.++..+....
11003 T Consensus 675 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~ 747 (852)
11004 T 6EN4_C 675 TVLPALMNEYR-VPELNVQNGVLKSLSFLFEYIGE-----MGKDY-IYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGV 747 (852)
11005 T ss_pred hHHHHHHHHhC-CCCHHHHHHHHHHHHHHHhhCch-----hhHHH-HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHcC
11006 Confidence 35666777776 46677888899999888764321 01111 1356667777777777778888877777776541
11007
11008
11009 Q NP_000290.2 627 -LLH-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
11010 Q Consensus 627 -e~~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
11011 ... ......+++.+...+.+ .++.++..++.++..+...... ...++.+...+.+. ++.++..+
11012 T Consensus 748 ~~~~~~~~~~~~~~~l~~~~~~------~~~~~r~~~~~~l~~l~~~~~~-------~~~~~~l~~~l~~~-~~~vr~~a 813 (852)
11013 T 6EN4_C 748 YGFGCEDSLNHLLNYVWPNVFE------TSPHVIQAVMGALEGLRVAIGP-------CRMLQYCLQGLFHP-ARKVRDVY 813 (852)
11014 T ss_pred ccCCcHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhhCc-------cchHHHHHHHhCCC-cHHHHHHH
11015 Confidence 110 00111233333333333 2567777888888777643211 23455566666655 77889999
11016
11017
11018 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
11019 Q Consensus 705 L~aLsnL~~~ 714 (747)
11020 +.++..+...
11021 T Consensus 814 ~~~l~~l~~~ 823 (852)
11022 T 6EN4_C 814 WKIYNSIYIG 823 (852)
11023 T ss_pred HHHHHHHHhh
11024 Confidence 9998888754
11025
11026
11027 No 268
11028 >1QBK_B STRUCTURE OF THE KARYOPHERIN BETA2-RAN; HEAT REPEATS, NUCLEAR TRANSPORT PROTEIN; HET: GNP; 3.0A {Homo sapiens} SCOP: a.118.1.1
11029 Probab=92.44 E-value=0.0043 Score=66.06 Aligned_cols=151 Identities=10% Similarity=0.047 Sum_probs=89.7 Template_Neff=13.200
11030
11031 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
11032 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
11033 .++.+...+. +.++.++..++.++..++..... .... ....+++.+...+.+.++.++..++.++..++...
11034 T Consensus 398 ~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 470 (890)
11035 T 1QBK_B 398 ILPLLKELLF-HHEWVVKESGILVLGAIAEGCMQ-----GMIP-YLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVV 470 (890)
11036 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHhHh-----hhHh-hHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHc
11037 Confidence 3445555555 35677888888888888764321 1111 12346677777777778889999999999887651
11038
11039
11040 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
11041 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
11042 .. .......+++.+...+.+ .++.++..++.++..++........... ..+++.+...+.+. +..++..++
11043 T Consensus 471 ~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~~~~~~~ 542 (890)
11044 T 1QBK_B 471 SQPPDTYLKPLMTELLKRILD------SNKRVQEAACSAFATLEEEACTELVPYL-AYILDTLVFAFSKY-QHKNLLILY 542 (890)
11045 T ss_pred CCCCchhhHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHhhcc-CHHHHHHHH
11046 Confidence 11 111112345555555554 3567888889998888764322111111 23455555555544 455666666
11047
11048
11049 Q NP_000290.2 706 LLLSDMWS 713 (747)
11050 Q Consensus 706 ~aLsnL~~ 713 (747)
11051 .++..++.
11052 T Consensus 543 ~~l~~l~~ 550 (890)
11053 T 1QBK_B 543 DAIGTLAD 550 (890)
11054 T ss_pred HHHHHHHH
11055 Confidence 77666654
11056
11057
11058 No 269
11059 >6CRI_I Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
11060 Probab=92.43 E-value=0.0043 Score=62.06 Aligned_cols=145 Identities=10% Similarity=0.022 Sum_probs=87.2 Template_Neff=13.200
11061
11062 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
11063 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
11064 .++.++..+....++.++..++.+|..+..... . ....++.+...+.+.++.++..++.+|..+.....
11065 T Consensus 415 ~~~~l~~~l~~~~~~~~r~~a~~~l~~~~~~~~-------~----~~~~l~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 483 (570)
11066 T 6CRI_I 415 VIATLCENLDSLDEPEARAAMIWIVGEYAERID-------N----ADELLESFLEGFHDKSTQVQLQLLTAIVKLFLKKP 483 (570)
11067 T ss_dssp THHHHTSSCTTCCCHHHHHHHHHHHHHTTTTST-------T----HHHHHHHHTTSGGGSCSHHHHHHHHHHHHHHHHCT
11068 T ss_pred HHHHHHHchhhCCCHHHHHHHHHHHHHHHHhcc-------C----HHHHHHHHHHccCCCCHHHHHHHHHHHHHHHhcCc
11069 Confidence 456666666522456777788888887765311 0 13456667777777778889999999988876521
11070
11071
11072 Q NP_000290.2 628 LHRVMGNQVFPEVTRL-LTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
11073 Q Consensus 628 ~~~ll~~giI~~Ll~L-L~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
11074 . . +.. .+..++.. +.+. .+..++..+..++..+.... ......+ ...++.++..+.+. ++.++..++.
11075 T Consensus 484 ~-~-~~~-~~~~~l~~~~~~~-----~~~~vr~~a~~~~~~l~~~~-~~~~~~~-~~~~~~l~~~l~~~-~~~~~~~~~~ 552 (570)
11076 T 6CRI_I 484 T-E-TQE-LVQQVLSLATQDS-----DNPDLRDRGYIYWRLLSTDP-VAAKEVV-LAEKPLISEETDLI-EPTLLDELIC 552 (570)
11077 T ss_dssp T-T-THH-HHHHHHCCCCCSC-----CCHHHHHHHHHHHHHHHHCH-HHHHHHT-SCCCCCCCCCCCCC-CHHHHHHHHS
11078 T ss_pred H-H-HHH-HHHHHHHHHhcCC-----CCchHHHHHHHHHHHhcCCh-HHHHHHH-HccCCCCCccccCC-chhHHHHHHH
11079 Confidence 1 0 111 12222222 3321 15678888888888776542 2111222 23466666666655 6788888888
11080
11081
11082 Q NP_000290.2 707 LLSDMWSS 714 (747)
11083 Q Consensus 707 aLsnL~~~ 714 (747)
11084 +|..++..
11085 T Consensus 553 ~l~~l~~~ 560 (570)
11086 T 6CRI_I 553 YIGTLASV 560 (570)
11087 T ss_dssp CSSBHHHH
11088 T ss_pred HhhcHHHH
11089 Confidence 88887754
11090
11091
11092 No 270
11093 >2RU4_B Armadillo Repeat Protein, N-terminal fragment; solenoid repeat, Armadillo repeat motif; NMR {synthetic construct}
11094 Probab=92.41 E-value=0.0045 Score=45.28 Aligned_cols=71 Identities=30% Similarity=0.361 Sum_probs=42.5 Template_Neff=12.400
11095
11096 Q NP_000290.2 287 GGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
11097 Q Consensus 287 ~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
11098 ++++.+...+...+..++..+++++.+++.........+...+.+..+...+. ..++.++..++.++.+++
11099 T Consensus 12 ~~~~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~ 82 (84)
11100 T 2RU4_B 12 GALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQS-HENEKIQKEAQEALEKLQ 82 (84)
11101 T ss_dssp TSHHHHHHHTTCSCHHHHHHHHHHHHHHHTCSSSTTHHHHHHTCHHHHHHHTT-SSCHHHHHHHHHHHHHHC
11102 T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHhc-CCCHHHHHHHHHHHHHHh
11103 Confidence 45555666666556677788888888877653332223333445555665554 345566666777766654
11104
11105
11106 No 271
11107 >4L7M_A Putative uncharacterized protein; HEAT-repeats, Hypothetical, UNKNOWN FUNCTION; HET: MSE, GOL; 2.002A {Thermococcus onnurineus}
11108 Probab=92.32 E-value=0.0047 Score=55.57 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=52.1 Template_Neff=12.800
11109
11110 Q NP_000290.2 545 HSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
11111 Q Consensus 545 e~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
11112 +.+.++.+...+. +.++.++..++.+|..+...... . .... .....++.|...+.+.++.++..++.+|..+..
11113 T Consensus 35 ~~~~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~ 108 (269)
11114 T 4L7M_A 35 DKRALFLILELAG-EDDETTRLRAFVALGEILKRADS---D-LRMM-VLERHLDVFINALSQENEKVTIKALRALGYLVK 108 (269)
11115 T ss_dssp CHHHHHHHHHHTT-SSCHHHHHHHHHHHHHHHTTSCH---H-HHHH-HHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHHT
11116 T ss_pred CcchHHHHHHHhC-CCCHHHHHHHHHHHHHHHhcCCH---H-HHHH-HHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
11117 Confidence 4467778888887 46778888999999888764211 0 0111 123567777888887788888889998888876
11118
11119
11120 Q NP_000290.2 625 H 625 (747)
11121 Q Consensus 625 ~ 625 (747)
11122 .
11123 T Consensus 109 ~ 109 (269)
11124 T 4L7M_A 109 D 109 (269)
11125 T ss_dssp T
11126 T ss_pred c
11127 Confidence 3
11128
11129
11130 No 272
11131 >5WBJ_A Regulatory-associated protein of TOR 1,Eukaryotic; Raptor, TOS, PROTEIN BINDING; 3.0A {Arabidopsis thaliana}
11132 Probab=92.23 E-value=0.0059 Score=72.68 Aligned_cols=100 Identities=11% Similarity=0.096 Sum_probs=68.1 Template_Neff=8.700
11133
11134 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLH----------- 629 (747)
11135 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~----------- 629 (747)
11136 ++.++..++.+|..|+...+. ........++++.|+.+|.+.+++++..++.+|++++......
11137 T Consensus 612 ~~~lr~~a~~~L~~L~~~~~~-----~~~~~~~~~~~~~L~~lL~~~~~~VRaaal~aL~~li~~~~~~~~~~~~~~~~~ 686 (1287)
11138 T 5WBJ_A 612 EPLFLQWLCLCLGKLWEDFME-----AQIMGREANAFEKLAPLLSEPQPEVRAAAVFALGTLLDIGFDSNKSVVEDEFDD 686 (1287)
11139 T ss_dssp CHHHHHHHHHHHHHHHTTCHH-----HHHHHHHTTHHHHHGGGGGCSCHHHHHHHHHHHHHTCC------------CCCC
11140 T ss_pred CHHHHHHHHHHHHHHHhccHH-----HHHHHHHcCHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCccccccccCCCCCH
11141 Confidence 456667788888888765432 1233345678889999999889999999999999998762110
11142
11143
11144 Q NP_000290.2 630 ---RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
11145 Q Consensus 630 ---~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
11146 ..+..+++..|..++.+ .++.++..++.+|++++..
11147 T Consensus 687 ~~~~~~~~~i~~~l~~~~~D------~S~~VR~e~~~aLs~~~~~ 725 (1287)
11148 T 5WBJ_A 687 DEKIRAEDAIIKSLLDVVSD------GSPLVRAEVAVALARFAFG 725 (1287)
11149 T ss_dssp CHHHHHHHHHHHHHHTTTTC------SCHHHHHHHHHHHHHHHHH
11150 T ss_pred HHHHHHHHHHHHHHHHHccC------CCHHHHHHHHHHHHHHHHh
11151 Confidence 00233455566666655 3678889999999888754
11152
11153
11154 No 273
11155 >5WBK_A Regulatory-associated protein of TOR 1,Ribosomal; Raptor, TOS, PROTEIN BINDING; 3.11A {Arabidopsis thaliana}
11156 Probab=92.22 E-value=0.0059 Score=72.65 Aligned_cols=101 Identities=11% Similarity=0.093 Sum_probs=68.3 Template_Neff=8.700
11157
11158 Q NP_000290.2 560 KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLH---------- 629 (747)
11159 Q Consensus 560 ~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~---------- 629 (747)
11160 .++.++..++.+|..|+...+. ........++++.|+.+|.+.+++++..++.+|+.++......
11161 T Consensus 611 ~~~~lr~~a~~~L~~L~~~~~~-----~~~~~~~~~~~~~L~~lL~~~~~~VRaaal~AL~~li~~~~~~~~~~~~~~~~ 685 (1287)
11162 T 5WBK_A 611 PEPLFLQWLCLCLGKLWEDFME-----AQIMGREANAFEKLAPLLSEPQPEVRAAAVFALGTLLDIGFDSNKSVVEDEFD 685 (1287)
11163 T ss_dssp -CHHHHHHHHHHHHHHHTTCHH-----HHHHHHTTTHHHHHGGGGGCSCHHHHHHHHHHHHHHCC------------CCC
11164 T ss_pred CCHHHHHHHHHHHHHHHcccHH-----HHHHHHHCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCccccccccCCCCC
11165 Confidence 3456677788888888765432 1233345678889999999888999999999999998762110
11166
11167
11168 Q NP_000290.2 630 ----RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
11169 Q Consensus 630 ----~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
11170 ..+..+++..|..++.+ .++.++..++.+|++++..
11171 T Consensus 686 ~~~~~~~~~~i~~~l~~~~~D------~s~~VR~e~~~als~~~~~ 725 (1287)
11172 T 5WBK_A 686 DDEKIRAEDAIIKSLLDVVSD------GSPLVRAEVAVALARFAFG 725 (1287)
11173 T ss_dssp CCHHHHHHHHHHHHHHTTTTC------SCHHHHHHHHHHHHHHHHH
11174 T ss_pred HHHHHHHHHHHHHHHHHHccC------CCHHHHHHHHHHHHHHHHh
11175 Confidence 01233455566666655 3678888899999888754
11176
11177
11178 No 274
11179 >2QK2_A LP04448p; Mini spindles, Msps, XMAP215, Dis1; 2.1A {Drosophila melanogaster}
11180 Probab=92.22 E-value=0.005 Score=54.55 Aligned_cols=145 Identities=9% Similarity=0.135 Sum_probs=94.6 Template_Neff=12.700
11181
11182 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH- 625 (747)
11183 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~- 625 (747)
11184 .++.+...+. +.++.++..++..|..+....+. .... .-..+++.+...+ .+.++.++..++.+|..+...
11185 T Consensus 16 l~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~ 88 (242)
11186 T 2QK2_A 16 MPKDFYDKLE-EKKWTLRKESLEVLEKLLTDHPK-----LENG-EYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGL 88 (242)
11187 T ss_dssp SCTTHHHHHT-CSSHHHHHHHHHHHHHHHHHCSS-----BCCC-CCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHH
11188 T ss_pred CCHHHHHHHh-ccchHHHHHHHHHHHHHHhhCcc-----cccc-hHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHh
11189 Confidence 4566777777 47788888999999988764321 1111 1134667777777 777788999999999988865
11190
11191
11192 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
11193 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
11194 ... .... ..+++.+...+.+ .+..++..++.+|..+....+ ....++.+...+.+. ++.++..+
11195 T Consensus 89 ~~~~~~~~-~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~-------~~~~~~~l~~~l~~~-~~~~r~~~ 153 (242)
11196 T 2QK2_A 89 AKRFSNYA-SACVPSLLEKFKE------KKPNVVTALREAIDAIYASTS-------LEAQQESIVESLSNK-NPSVKSET 153 (242)
11197 T ss_dssp GGGGHHHH-HHHHHHHHHGGGC------CCHHHHHHHHHHHHHHHTTSC-------HHHHHHHHHHHTTCS-CHHHHHHH
11198 T ss_pred hHhHHHHH-HhHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHcCC-CHHHHHHH
11199 Confidence 211 1111 2356666666665 356788888888888875421 112455566666655 67778888
11200
11201
11202 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
11203 Q Consensus 705 L~aLsnL~~~ 714 (747)
11204 +.++..++..
11205 T Consensus 154 ~~~l~~l~~~ 163 (242)
11206 T 2QK2_A 154 ALFIARALTR 163 (242)
11207 T ss_dssp HHHHHHHHTT
11208 T ss_pred HHHHHHHHHh
11209 Confidence 8887777653
11210
11211
11212 No 275
11213 >3W3U_A Importin subunit beta-3; HEAT repeat, nuclear import, PROTEIN; 2.6A {Saccharomyces cerevisiae}
11214 Probab=92.21 E-value=0.005 Score=67.54 Aligned_cols=115 Identities=14% Similarity=0.059 Sum_probs=64.9 Template_Neff=13.000
11215
11216 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
11217 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~-s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
11218 .+++.+...+.+.++.++..++.++..+...............+++.+...+. +.+..++..++.++..++........
11219 T Consensus 397 ~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~~~~ 476 (1078)
11220 T 3W3U_A 397 KILDMVIPLINDPHPRVQYGCCKVLGQISTAFSPFIQRTAHDRILPALISKLTSECTSRVQTHAAAALVAFSEFASKDIL 476 (1078)
11221 T ss_dssp HHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHSSTTSCHHHHHHHHHHHHHHHTTCCHHHH
11222 T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCChhhh
11223 Confidence 34444455555566778888888888876543221111111234555555555 34566777788888777654322111
11224
11225
11226 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
11227 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
11228 ......++..+...+. ..++.++..++.++..++..
11229 T Consensus 477 ~~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 512 (1078)
11230 T 3W3U_A 477 EPYLDSLLTNLLVLLQ-SNKLYVQEQALTTIAFIAEA 512 (1078)
11231 T ss_dssp GGGHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHH
11232 T ss_pred HHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHH
11233 Confidence 1111245555666665 44567778888888877754
11234
11235
11236 No 276
11237 >2IW3_B ELONGATION FACTOR 3A; ACETYLATION, ATP-BINDING, ELONGATION FACTOR, PROTEIN; HET: MSE, ADP, SO4; 2.4A {SACCHAROMYCES CEREVISIAE}
11238 Probab=92.03 E-value=0.0058 Score=68.10 Aligned_cols=148 Identities=16% Similarity=0.128 Sum_probs=74.2 Template_Neff=11.700
11239
11240 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
11241 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
11242 +++.|..++. +.+..++..|+.+|..++..... .. ....++.++..+.+.+. ...++..+..+.....
11243 T Consensus 176 i~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-------~~--~~~~~~~l~~~l~~~~~--~~~~~~~l~~~~~~~~ 243 (986)
11244 T 2IW3_B 176 LIPVLSETMW-DTKKEVKAAATAAMTKATETVDN-------KD--IERFIPSLIQCIADPTE--VPETVHLLGATTFVAE 243 (986)
11245 T ss_dssp HHHHHHHHTT-CSCHHHHHHHHHHHHHHGGGCCS-------ST--TGGGHHHHHHHHHCGGG--HHHHHHHHTTCCCCSC
11246 T ss_pred HHHHHHHhcC-cCCHHHHHHHHHHHHHHHHhcCc-------HH--HHHHHHHHHHHhcCccc--chHHHHHHHHchhhcc
11247 Confidence 5566667776 45667777888888777653211 11 12344455555543322 2222323222222110
11248
11249
11250 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK-QYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
11251 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~-~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
11252 ........+++.+...+.+ .++.++..++.++..++........ ......+++.|+.++.+..++.++..++.
11253 T Consensus 244 ~~~~~~~~~l~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~i~~~l~~~l~d~~d~~vr~~a~~ 317 (986)
11254 T 2IW3_B 244 VTPATLSIMVPLLSRGLNE------RETGIKRKSAVIIDNMCKLVEDPQVIAPFLGKLLPGLKSNFATIADPEAREVTLR 317 (986)
11255 T ss_dssp CCHHHHHHHHHHHHHHHTS------SSHHHHHHHHHHHHHHHTTCCCHHHHHHHHTTTHHHHHHHHHHCCCHHHHHHHHH
11256 T ss_pred cCHHHHHhHHHHHHHhccc------ccccccHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHH
11257 Confidence 0000011245555555554 3567778888888877754211100 00112356666666665423677777777
11258
11259
11260 Q NP_000290.2 707 LLSDMWS 713 (747)
11261 Q Consensus 707 aLsnL~~ 713 (747)
11262 +|..+..
11263 T Consensus 318 ~l~~l~~ 324 (986)
11264 T 2IW3_B 318 ALKTLRR 324 (986)
11265 T ss_dssp HHHHHHH
11266 T ss_pred HHHHHHH
11267 Confidence 7777643
11268
11269
11270 No 277
11271 >4G3A_B CLIP-associating protein; TOG domain, HEAT repeat, MAP; HET: GOL; 1.994A {Drosophila melanogaster}
11272 Probab=91.94 E-value=0.0059 Score=54.01 Aligned_cols=150 Identities=10% Similarity=0.094 Sum_probs=93.1 Template_Neff=12.600
11273
11274 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
11275 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
11276 ..++.++..+. +.++.++..++..|..++..... . .... ....+++.+...+.+.++.++..++.++..++...
11277 T Consensus 7 ~~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~---~-~~~~-~~~~~~~~l~~~l~d~~~~v~~~a~~~l~~l~~~~ 80 (237)
11278 T 4G3A_B 7 SDLDGFIQQMP-KADMRVKVQLAEDLVTFLSDDTN---S-IVCT-DMGFLIDGLMPWLTGSHFKIAQKSLEAFSELIKRL 80 (237)
11279 T ss_dssp SSHHHHHHHST-TCCHHHHHHHHHHHHHHHHCTTS---C-CCCS-CHHHHHHHHGGGGSSSCHHHHHHHHHHHHHHHHHH
11280 T ss_pred chHHHHHHhcC-cCCHHHHHHHHHHHHHHhhCCCC---C-cccc-cHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHh
11281 Confidence 35666777777 46778888999999888764221 0 0111 12345677777777778889999999999988652
11282
11283
11284 Q NP_000290.2 627 L-LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNII-NLCRSSASPKAAEAA 704 (747)
11285 Q Consensus 627 e-~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll-~LL~s~~d~eVr~aA 704 (747)
11286 . ........+++.++..+.+ .+..++..++.+|..+........ ...++.+. .++.+. ++.++..+
11287 T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~~~~-----~~~~~~l~~~~l~~~-~~~~r~~a 148 (237)
11288 T 4G3A_B 81 GSDFNAYTATVLPHVIDRLGD------SRDTVREKAQLLLRDLMEHRVLPP-----QALIDKLATSCFKHK-NAKVREEF 148 (237)
11289 T ss_dssp GGGGGGTHHHHHHHHHHHHTC------SCHHHHHHHHHHHHHHHHTTSSCH-----HHHHHHHHHHHTTCS-CHHHHHHH
11290 T ss_pred hhhHHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHcCCCCH-----HHHHHHHHHHHhhCC-CHHHHHHH
11291 Confidence 1 1111112356666666655 356788888888888875311111 12345555 555544 56677777
11292
11293
11294 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
11295 Q Consensus 705 L~aLsnL~~~ 714 (747)
11296 +.++..++..
11297 T Consensus 149 ~~~l~~l~~~ 158 (237)
11298 T 4G3A_B 149 LQTIVNALHE 158 (237)
11299 T ss_dssp HHHHHHHHHH
11300 T ss_pred HHHHHHHHHH
11301 Confidence 7777776644
11302
11303
11304 No 278
11305 >5EWP_B Uncharacterized protein; translocation and attachment of rhoptries; 1.8A {Plasmodium falciparum Santa Lucia}
11306 Probab=91.92 E-value=0.0062 Score=55.67 Aligned_cols=176 Identities=16% Similarity=0.152 Sum_probs=134.6 Template_Neff=11.800
11307
11308 Q NP_000290.2 528 CPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDAT----------------LEACAGALQNLTASK--GLMSSGMSQL 589 (747)
11309 Q Consensus 528 ~~~~~~~~ni~~~~~lve~G~I~~LL~LL~ss~d~eV----------------r~~AL~aL~nLs~~s--~~~s~~~~~~ 589 (747)
11310 +-+++++++++.+..+++.|+++.|+.+|.. .+... +..++++|.+++... +. ...
11311 T Consensus 7 ~~~~~~~~~~~~~~~~~~~g~i~~L~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-----~~~ 80 (252)
11312 T 5EWP_B 7 KLLSFTSNDILRFDKAYDENDVQEFVNLCSS-TCEIEKLEDRMHPWAADPKTIGALSATQLAILASKENEPH-----YKD 80 (252)
11313 T ss_dssp --CCCCCHHHHHHHHHHHTTCHHHHHHHTTC-CCBCCCC--CCCSSSCCCCBHHHHHHHHHHHHHTCTTCTH-----HHH
11314 T ss_pred HHHhccHHHHhhhHHHHhcCCHHHHHHHhcC-CChHHHHHHHhhhhhCCHHHHHHHHHHHHHHHhcCCCCHH-----HHH
11315 Confidence 4456899999999999999999999999983 33222 236888888888652 21 244
11316
11317
11318 Q NP_000290.2 590 IGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRN 667 (747)
11319 Q Consensus 590 llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsn 667 (747)
11320 .+.+.++++.|+.++...++.++..++++|.+++.. ... ..+...++++.++.++.. .++.++..++++|.+
11321 T Consensus 81 ~~~~~g~i~~l~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~ 154 (252)
11322 T 5EWP_B 81 AIREANGIAVFINLLKSHELDRVHAAVVALSFLSVDNVKNCICMFESGALPYLISGMKS------NIDGMKAACAQTCRN 154 (252)
11323 T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTCHHHHHHHTTC------SCHHHHHHHHHHHHH
11324 T ss_pred HHHHcccHHHHHHHhhCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCcHHHHHHHhhC------CCHHHHHHHHHHHHH
11325 Confidence 445778999999999888888999999999999986 443 344556788888888875 367889999999999
11326
11327
11328 Q NP_000290.2 668 LMASQPQLAKQYFSSSMLNNIINLCRSSASP-------KAAEAARLLLSDMWSSKE 716 (747)
11329 Q Consensus 668 La~~s~e~~~~Lve~giL~~Ll~LL~s~~d~-------eVr~aAL~aLsnL~~~~~ 716 (747)
11330 ++...+.....+.+.++++.|+.++... +. .++..++.+|.+++...+
11331 T Consensus 155 l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~a~~~l~~l~~~~~ 209 (252)
11332 T 5EWP_B 155 IFVLDKKYKKEFLKLGGITQLVNLLELP-SNYDDSQPLYTQLEAIYHLEDFILNDG 209 (252)
11333 T ss_dssp HHTTCHHHHHHHHHTTHHHHHHHTTSCC-TTCCSCSCCHHHHHHHHHHHHHHEETT
11334 T ss_pred HHhcCHHHHHHHHHCChHHHHHHHhcCC-CCCCCCchHHHHHHHHHHHHHHHhcCC
11335 Confidence 9875455666677778889999988765 33 378889999999987665
11336
11337
11338 No 279
11339 >4QMI_B Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG domain; 1.9A {Homo sapiens}
11340 Probab=91.92 E-value=0.006 Score=54.09 Aligned_cols=147 Identities=7% Similarity=-0.004 Sum_probs=97.2 Template_Neff=12.600
11341
11342 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
11343 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
11344 .++.+...+. +.++.++..++.++..++..... .... .....++.++..+.+.+..++..++.++..+.....
11345 T Consensus 60 ~~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 132 (240)
11346 T 4QMI_B 60 LPTALKGRLN-DSNKILVQQTLNILQQLAVAMGP-----NIKQ-HVKNLGIPIITVLGDSKNNVRAAALATVNAWAEQTG 132 (240)
11347 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHGG-----GGGG-GCCCCCHHHHHHTTCSSHHHHHHHHHHHHHHHHHHC
11348 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhcH-----HHHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC
11349 Confidence 4566666676 46778888999999988764321 1111 123466777777777778888889999888875421
11350
11351
11352 Q NP_000290.2 628 LHRVMGNQVF--PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
11353 Q Consensus 628 ~~~ll~~giI--~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
11354 . ..++ +.+...+.+ .++.++..++.+|..++...... ... -..+++.+...+.+. +..++..++
11355 T Consensus 133 ~-----~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~-~~~-~~~~~~~l~~~l~~~-~~~vr~~a~ 198 (240)
11356 T 4QMI_B 133 M-----KEWLEGEDLSEELKK------ENPFLRQELLGWLAEKLPTLRST-PTD-LILCVPHLYSCLEDR-NGDVRKKAQ 198 (240)
11357 T ss_dssp S-----HHHHSSSHHHHHHTS------CCHHHHHHHHHHHHHHGGGCSSC-CGG-GGGGHHHHHHHTTCS-SHHHHHHHH
11358 T ss_pred h-----hHhccHHHHHHHHhc------CCHHHHHHHHHHHHHHHHhCCCC-cHH-HHHHHHHHHHHHhcC-CHHHHHHHH
11359 Confidence 1 1234 555666655 36788888999998877543221 111 124567777777766 788999999
11360
11361
11362 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
11363 Q Consensus 706 ~aLsnL~~~~ 715 (747)
11364 .++..+....
11365 T Consensus 199 ~~l~~l~~~~ 208 (240)
11366 T 4QMI_B 199 DALPFFMMHL 208 (240)
11367 T ss_dssp HHHHHHHHHH
11368 T ss_pred HHHHHHHHHh
11369 Confidence 9998887653
11370
11371
11372 No 280
11373 >4QMJ_A Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG DOMAIN; 2.498A {Homo sapiens}
11374 Probab=91.92 E-value=0.006 Score=54.09 Aligned_cols=147 Identities=7% Similarity=-0.004 Sum_probs=97.2 Template_Neff=12.600
11375
11376 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
11377 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
11378 .++.+...+. +.++.++..++.++..++..... .... .....++.++..+.+.+..++..++.++..+.....
11379 T Consensus 60 ~~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 132 (240)
11380 T 4QMJ_A 60 LPTALKGRLN-DSNKILVQQTLNILQQLAVAMGP-----NIKQ-HVKNLGIPIITVLGDSKNNVRAAALATVNAWAEQTG 132 (240)
11381 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHGG-----GGGG-GCCCCCHHHHHGGGCSSHHHHHHHHHHHHHHHHHHC
11382 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhcH-----HHHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC
11383 Confidence 4566666676 46778888999999988764321 1111 123466777777777778888889999888875421
11384
11385
11386 Q NP_000290.2 628 LHRVMGNQVF--PEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
11387 Q Consensus 628 ~~~ll~~giI--~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
11388 . ..++ +.+...+.+ .++.++..++.+|..++...... ... -..+++.+...+.+. +..++..++
11389 T Consensus 133 ~-----~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~-~~~-~~~~~~~l~~~l~~~-~~~vr~~a~ 198 (240)
11390 T 4QMJ_A 133 M-----KEWLEGEDLSEELKK------ENPFLRQELLGWLAEKLPTLRST-PTD-LILCVPHLYSCLEDR-NGDVRKKAQ 198 (240)
11391 T ss_dssp S-----HHHHSSSHHHHHHHS------SCHHHHHHHHHHHHHHGGGCSCC-CGG-GGGGHHHHHHHTTCS-SHHHHHHHH
11392 T ss_pred h-----hHhccHHHHHHHHhc------CCHHHHHHHHHHHHHHHHhCCCC-cHH-HHHHHHHHHHHHhcC-CHHHHHHHH
11393 Confidence 1 1234 555666655 36788888999998877543221 111 124567777777766 788999999
11394
11395
11396 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
11397 Q Consensus 706 ~aLsnL~~~~ 715 (747)
11398 .++..+....
11399 T Consensus 199 ~~l~~l~~~~ 208 (240)
11400 T 4QMJ_A 199 DALPFFMMHL 208 (240)
11401 T ss_dssp HTHHHHHHHH
11402 T ss_pred HHHHHHHHHh
11403 Confidence 9998887653
11404
11405
11406 No 281
11407 >5XAH_A Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
11408 Probab=91.84 E-value=0.0062 Score=58.52 Aligned_cols=153 Identities=14% Similarity=0.074 Sum_probs=87.5 Template_Neff=12.900
11409
11410 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNMSRHP 626 (747)
11411 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsnLa~~~ 626 (747)
11412 +++.+...+. +.++.++..++.+|..++..... ....+ -..+++.+...+. +.++.++..++.++..++...
11413 T Consensus 235 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~~-~~~i~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~ 307 (416)
11414 T 5XAH_A 235 LLPVLLSTAQ-EADPEVRSNAIFGMGVLAEHGGH-----PAQEH-FPKLLGLLFPLLARERHDRVRDNICGALARLLMAS 307 (416)
11415 T ss_dssp HHHHHHHHTS-CSSHHHHHHHHHHHHHHHHHHHH-----HHHTT-HHHHHHHHTTHHHHCCCHHHHHHHHHHHHHHHHHC
11416 T ss_pred HHHHHHHHhh-cCCHHHHHHHHHHHHHHHHhcCc-----hHHhh-HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhC
11417 Confidence 4556666666 35677888888888888764321 11111 1346677777777 567788999999999888652
11418
11419
11420 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA-SPKAAEAAR 705 (747)
11421 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~-d~eVr~aAL 705 (747)
11422 .... ....+++.+...+... ......+. ++.++..+....+......+ ..+++.+...+.+.. ...++..++
11423 T Consensus 308 ~~~~-~~~~~~~~l~~~l~~~----~~~~~~~~-~~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~~~~~~~r~~~~ 380 (416)
11424 T 5XAH_A 308 PTRK-PEPQVLAALLHALPLK----EDLEEWVT-IGRLFSFLYQSSPDQVIDVA-PELLRICSLILADNKIPPDTKAALL 380 (416)
11425 T ss_dssp CSSC-CCHHHHHHHHHHCSCC----SCTTHHHH-HHHHHHHHHHHCSTTGGGSH-HHHHHTGGGTSSCTTSCHHHHHHHH
11426 T ss_pred CCCC-CHHHHHHHHHHhCCCC----CchhhHHH-HHHHHHHHHhcCchHHHhhH-HHHHHHHHHHHcCCCCCHHHHHHHH
11427 Confidence 1110 1123455555555221 01344555 77777777764332211111 134555666555431 235778888
11428
11429
11430 Q NP_000290.2 706 LLLSDMWSS 714 (747)
11431 Q Consensus 706 ~aLsnL~~~ 714 (747)
11432 .++..+...
11433 T Consensus 381 ~~l~~l~~~ 389 (416)
11434 T 5XAH_A 381 LLLTFLAKQ 389 (416)
11435 T ss_dssp HHHHHHHHH
11436 T ss_pred HHHHHHHHh
11437 Confidence 888877643
11438
11439
11440 No 282
11441 >5XAH_C Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
11442 Probab=91.84 E-value=0.0062 Score=58.52 Aligned_cols=153 Identities=14% Similarity=0.074 Sum_probs=87.3 Template_Neff=12.900
11443
11444 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNMSRHP 626 (747)
11445 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsnLa~~~ 626 (747)
11446 +++.+...+. +.++.++..++.+|..++..... ....+ -..+++.+...+. +.++.++..++.++..++...
11447 T Consensus 235 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~~-~~~i~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~ 307 (416)
11448 T 5XAH_C 235 LLPVLLSTAQ-EADPEVRSNAIFGMGVLAEHGGH-----PAQEH-FPKLLGLLFPLLARERHDRVRDNICGALARLLMAS 307 (416)
11449 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHSHH-----HHHTT-HHHHHHHHTHHHHHCCCHHHHHHHHHHHHHHHHTS
11450 T ss_pred HHHHHHHHhh-cCCHHHHHHHHHHHHHHHHhcCc-----hHHhh-HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhC
11451 Confidence 4556666666 35677888888888888764321 11111 1346677777777 567788999999999888652
11452
11453
11454 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA-SPKAAEAAR 705 (747)
11455 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~-d~eVr~aAL 705 (747)
11456 .... ....+++.+...+... ......+. ++.++..+....+......+ ..+++.+...+.+.. ...++..++
11457 T Consensus 308 ~~~~-~~~~~~~~l~~~l~~~----~~~~~~~~-~~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~~~~~~~r~~~~ 380 (416)
11458 T 5XAH_C 308 PTRK-PEPQVLAALLHALPLK----EDLEEWVT-IGRLFSFLYQSSPDQVIDVA-PELLRICSLILADNKIPPDTKAALL 380 (416)
11459 T ss_dssp CC---CCHHHHHHHHHHCSCC----SCGGGHHH-HHHHHHHHHHHCHHHHTTTH-HHHHHHHHHHHSCTTSCHHHHHHHH
11460 T ss_pred CCCC-CHHHHHHHHHHhCCCC----CchhhHHH-HHHHHHHHHhcCchHHHhhH-HHHHHHHHHHHcCCCCCHHHHHHHH
11461 Confidence 1110 1123455555555221 01344555 77777777764332211111 134555666555431 235778888
11462
11463
11464 Q NP_000290.2 706 LLLSDMWSS 714 (747)
11465 Q Consensus 706 ~aLsnL~~~ 714 (747)
11466 .++..+...
11467 T Consensus 381 ~~l~~l~~~ 389 (416)
11468 T 5XAH_C 381 LLLTFLAKQ 389 (416)
11469 T ss_dssp HHHHHHHHH
11470 T ss_pred HHHHHHHHh
11471 Confidence 888877643
11472
11473
11474 No 283
11475 >2QK1_A Protein STU2; stu2, Stu2p, XMAP215, Dis1, TOG; 1.7A {Saccharomyces cerevisiae}
11476 Probab=91.81 E-value=0.0063 Score=53.79 Aligned_cols=152 Identities=9% Similarity=0.052 Sum_probs=95.7 Template_Neff=12.900
11477
11478 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQN-LTASKGLMSSGMSQ--LIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMS 623 (747)
11479 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~n-Ls~~s~~~s~~~~~--~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa 623 (747)
11480 .++.+...+. +.++.++..++..|.. ++..... .. .. ....+++.+...+ .+.++.++..++.++..++
11481 T Consensus 17 l~~~l~~~l~-~~~~~~r~~a~~~l~~~l~~~~~~-----~~~~~~-~~~~~~~~l~~~l~~d~~~~vr~~a~~~l~~l~ 89 (249)
11482 T 2QK1_A 17 LPKDFQERIT-SSKWKDRVEALEEFWDSVLSQTKK-----LKSTSQ-NYSNLLGIYGHIIQKDANIQAVALAAQSVELIC 89 (249)
11483 T ss_dssp SCTTHHHHHT-CSSHHHHHHHHHHHHHHTGGGCCC-----BCCTTC-CCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
11484 T ss_pred CCHHHHHHHh-CCCHHHHHHHHHHHHHHHHhcCCC-----cCCCCc-cHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
11485 Confidence 4556666676 4677888899999998 7754221 01 01 1245677777888 7778889999999999888
11486
11487
11488 Q NP_000290.2 624 RH-PL-LHR-VMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL-AKQYFSSSMLNNIINLCRSSASPK 699 (747)
11489 Q Consensus 624 ~~-~e-~~~-ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~-~~~Lve~giL~~Ll~LL~s~~d~e 699 (747)
11490 .. .. ... .....+++.++..+.+ .+..++..++.++..+....+.. ..... ..+++.+...+.+. ++.
11491 T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~ 161 (249)
11492 T 2QK1_A 90 DKLKTPGFSKDYVSLVFTPLLDRTKE------KKPSVIEAIRKALLTICKYYDPLASSGRN-EDMLKDILEHMKHK-TPQ 161 (249)
11493 T ss_dssp HHHCTTTSCHHHHHHHHHHHHHGGGC------CCHHHHHHHHHHHHHHHHHSCTTCTTCTT-HHHHHHHHHHTTCS-SHH
11494 T ss_pred HHcCCCCCCHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhChhcccCCH-HHHHHHHHHHhCCC-CHH
11495 Confidence 65 22 111 1122355666666655 35678888888888887542210 00111 23566666666655 677
11496
11497
11498 Q NP_000290.2 700 AAEAARLLLSDMWSS 714 (747)
11499 Q Consensus 700 Vr~aAL~aLsnL~~~ 714 (747)
11500 ++..++.++..+...
11501 T Consensus 162 vr~~~~~~l~~~~~~ 176 (249)
11502 T 2QK1_A 162 IRMECTQLFNASMKE 176 (249)
11503 T ss_dssp HHHHHHHHHHHHHHH
11504 T ss_pred HHHHHHHHHHHHHHh
11505 Confidence 888888888777654
11506
11507
11508 No 284
11509 >5H2V_A Importin subunit beta-3, Ubiquitin-like-specific protease; nuclear import, PROTEIN TRANSPORT-HYDROLASE complex; 2.8A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
11510 Probab=91.79 E-value=0.0063 Score=66.66 Aligned_cols=114 Identities=16% Similarity=0.088 Sum_probs=64.4 Template_Neff=13.000
11511
11512 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS-PNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
11513 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s-~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
11514 +++.+...+.+.++.++..++.++..+...............+++.+...+.+ .+..++..++.++..++.........
11515 T Consensus 398 ~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~ 477 (1078)
11516 T 5H2V_A 398 ILDMVIPLINDPHPRVQYGCCNVLGQISTDFSPFIQRTAHDRILPALISKLTSECTSRVQTHAAAALVNFSEFASKDILE 477 (1078)
11517 T ss_dssp HHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTSTTSCHHHHHHHHHHHHHHHTTCCHHHHG
11518 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhhccHHHHHHHHHhHHHHHHHHcccCCCHHHHHHHHHHHHHHHhcCChhhHH
11519 Confidence 34444445555566778888888887765432211101113455555555554 45677788888888777543221101
11520
11521
11522 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
11523 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
11524 .....++..+...+. ..++.++..++.++..++..
11525 T Consensus 478 ~~~~~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~ 512 (1078)
11526 T 5H2V_A 478 PYLDSLLTNLLVLLQ-SNKLYVQEQALTTIAFIAEA 512 (1078)
11527 T ss_dssp GGHHHHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHH
11528 T ss_pred HHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHH
11529 Confidence 111245555666654 44566778888888877654
11530
11531
11532 No 285
11533 >6OWT_A AP-2 complex subunit alpha, AP-2; AP, HIV, Nef, trafficking, Protein;{Rattus norvegicus}
11534 Probab=91.69 E-value=0.0072 Score=67.72 Aligned_cols=142 Identities=13% Similarity=0.056 Sum_probs=80.2 Template_Neff=11.000
11535
11536 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSD--VVRSGASLLSNMSRH 625 (747)
11537 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~e--Vr~~AL~aLsnLa~~ 625 (747)
11538 .++.++.++. +.+..++..++.++..+...... ....+++.+...+.+.+.. ++..++++|+.+...
11539 T Consensus 442 ~~~~l~~~l~-~~~~~v~~~a~~~l~~i~~~~~~----------~~~~~~~~l~~~l~~~~~~~~v~~~a~~~L~~~~~~ 510 (939)
11540 T 6OWT_A 442 YVDTILNLIR-IAGDYVSEEVWYRVIQIVINRDD----------VQGYAAKTVFEALQAPACHENLVKVGGYILGEFGNL 510 (939)
11541 T ss_pred HHHHHHHHhC-CCChhcCHHHHHHHHHHHhcCHH----------HHHhHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHh
11542 Confidence 5666777776 35556777777777776643211 1234556666667654444 778888888877654
11543
11544
11545 Q NP_000290.2 626 P-LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC---RSSASPKAA 701 (747)
11546 Q Consensus 626 ~-e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL---~s~~d~eVr 701 (747)
11547 . .........++..|...+.. .+..++..++.+|..++...+.. ...+..++..+ .+. +.+++
11548 T Consensus 511 ~~~~~~~~~~~~~~~L~~~l~~------~~~~vr~~al~aL~~l~~~~~~~------~~~i~~ll~~l~~~~~~-d~evr 577 (939)
11549 T 6OWT_A 511 IAGDPRSSPLIQFNLLHSKFHL------CSVPTRALLLSTYIKFVNLFPEV------KATIQDVLRSDSQLKNA-DVELQ 577 (939)
11550 T ss_pred cCCCCCCCHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhChhh------HhHHHHHHHHhcccCCC-CHHHH
11551 Confidence 1 11100111244455555554 25677888888888887643221 12334444433 333 66777
11552
11553
11554 Q NP_000290.2 702 EAARLLLSDMWS 713 (747)
11555 Q Consensus 702 ~aAL~aLsnL~~ 713 (747)
11556 ..++.++..+..
11557 T Consensus 578 ~~a~~~l~~l~~ 589 (939)
11558 T 6OWT_A 578 QRAVEYLRLSTV 589 (939)
11559 T ss_pred HHHHHHHHHHcC
11560 Confidence 777777766553
11561
11562
11563 No 286
11564 >2P8Q_A Importin beta-1 subunit, Snurportin-1; HEAT repeat, IBB-domain, Importin, Karyopherin; 2.35A {Homo sapiens} SCOP: a.118.1.1
11565 Probab=91.69 E-value=0.0066 Score=64.52 Aligned_cols=160 Identities=8% Similarity=0.007 Sum_probs=89.0 Template_Neff=13.100
11566
11567 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG--NSDVVRSGASLLSNMSRH 625 (747)
11568 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~--d~eVr~~AL~aLsnLa~~ 625 (747)
11569 .++.++..+..+.++.++..++.+|..++..... ....+ -..+++.+...+.+. ++.++..++.++..++..
11570 T Consensus 650 ~~~~l~~~l~~~~~~~vr~~~~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~~~v~~~a~~~l~~l~~~ 723 (876)
11571 T 2P8Q_A 650 FKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQS-----NIIPF-CDEVMQLLLENLGNENVHRSVKPQILSVFGDIALA 723 (876)
11572 T ss_dssp HHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHGG-----GGHHH-HHHHHHHHHHHTSCSSSCTTHHHHHHHHHHHHHHH
11573 T ss_pred HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhh-----cchHh-HHHHHHHHHHHHcCcCcccchHhHHHHHHHHHHHH
11574 Confidence 3455555555225667888888888888754221 01111 135677777777766 678888999999888865
11575
11576
11577 Q NP_000290.2 626 -PLL-HRVMGNQVFPEVTRLLTSHTG-----NTSNSEDILSSACYTVRNLMASQPQLAKQYFS-----SSMLNNIINLCR 693 (747)
11578 Q Consensus 626 -~e~-~~ll~~giI~~Ll~LL~s~s~-----~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve-----~giL~~Ll~LL~ 693 (747)
11579 ... ..++ ..+++.+...+..... ....+..++..++.++..++.........+.. ...++.++..+.
11580 T Consensus 724 ~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 802 (876)
11581 T 2P8Q_A 724 IGGEFKKYL-EVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFID 802 (876)
11582 T ss_dssp HGGGGHHHH-HHHHHHHHHHHSCCCCTTCSTTHHHHHHHHHHHHHHHHHHHHHHSCSSCSCCCGGGGTGGGHHHHHHHHH
11583 T ss_pred hchhhHHHH-HHHHHHHHHHHHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCchhhHHHhHHHHHHHHH
11584 Confidence 211 1111 2345555555443100 00014667888888888887621111111100 011444444443
11585
11586
11587 Q NP_000290.2 694 ------SSASPKAAEAARLLLSDMWSSK 715 (747)
11588 Q Consensus 694 ------s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
11589 +. +..++..++.++..++..-
11590 T Consensus 803 ~~~~~~~~-~~~v~~~~~~~l~~l~~~~ 829 (876)
11591 T 2P8Q_A 803 HIAGDEDH-TDGVVACAAGLIGDLCTAF 829 (876)
11592 T ss_dssp HHHHSSCC-CHHHHHHHHHHHHHHHHHH
11593 T ss_pred HHhCCCCC-ChhHHHHHHHHHHHHHHHh
11594 Confidence 33 5778888888888877543
11595
11596
11597 No 287
11598 >5MFO_F YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: CA, EDO; 1.3A {synthetic construct}
11599 Probab=91.65 E-value=0.0068 Score=51.30 Aligned_cols=157 Identities=18% Similarity=0.285 Sum_probs=121.2 Template_Neff=13.100
11600
11601 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
11602 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
11603 .+.++.++..+. +.++.++..++..|.+++...+. ....+.+.++++.|..++.+.++.++..++++|.+++..
11604 T Consensus 3 ~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~ 76 (202)
11605 T 5MFO_F 3 GSELPQMVQQLN-SPDQQELQSALRKLSQIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG 76 (202)
11606 T ss_dssp CTTHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS
11607 T ss_pred CchHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCChH-----HHHHHHHCChHHHHHHHhcCCCHHHHHHHHHHHHHHhcC
11608 Confidence 456788888887 47778888999999999875332 233445678899999999988889999999999999976
11609
11610
11611 Q NP_000290.2 626 -PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
11612 Q Consensus 626 -~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
11613 ... ..+...++++.+..++.+ .++.++..++.+|.+++...+.....+.+.++++.+..++.+. +..++..
11614 T Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~ 149 (202)
11615 T 5MFO_F 77 GNEQIQAVIDAGALPALVQLLSS------PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP-NEQILQE 149 (202)
11616 T ss_dssp CHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHH
11617 T ss_pred CHHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCC-CHHHHHH
11618 Confidence 333 334455678888888866 3678888999999999876455555556667888888888866 7888999
11619
11620
11621 Q NP_000290.2 704 ARLLLSDMWSSK 715 (747)
11622 Q Consensus 704 AL~aLsnL~~~~ 715 (747)
11623 ++.+|.+++...
11624 T Consensus 150 ~~~~l~~l~~~~ 161 (202)
11625 T 5MFO_F 150 ALWALSNIASGG 161 (202)
11626 T ss_dssp HHHHHHHHTTSC
11627 T ss_pred HHHHHHHHhcCh
11628 Confidence 999999998765
11629
11630
11631 No 288
11632 >5MFO_E YIIIM3AIII; Designed armadillo repeat protein, peptide; HET: EDO, CA; 1.3A {synthetic construct}
11633 Probab=91.58 E-value=0.007 Score=51.19 Aligned_cols=157 Identities=18% Similarity=0.285 Sum_probs=120.0 Template_Neff=13.100
11634
11635 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
11636 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
11637 .+.++.++..+. +.++.++..++..|.+++...+. ....+.+.++++.|..++.+.++.++..++++|.+++..
11638 T Consensus 3 ~~~~~~l~~~l~-~~~~~~~~~a~~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~a~~~l~~l~~~ 76 (202)
11639 T 5MFO_E 3 GSELPQMVQQLN-SPDQQELQSALRKLSQIASGGNE-----QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG 76 (202)
11640 T ss_dssp --CHHHHHHHTT-CSSHHHHHHHHHHHHHHHTSCHH-----HHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS
11641 T ss_pred CchHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCChH-----HHHHHHHCChHHHHHHHhhCCCHHHHHHHHHHHHHHhcC
11642 Confidence 456788888887 47778888999999999875332 233445678899999999988889999999999999976
11643
11644
11645 Q NP_000290.2 626 -PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
11646 Q Consensus 626 -~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
11647 +.. ..+...++++.+...+.+ .++.++..++.+|.+++...+.....+.+.++++.+..++.+. +..++..
11648 T Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~ 149 (202)
11649 T 5MFO_E 77 GNEQIQAVIDAGALPALVQLLSS------PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP-NEQILQE 149 (202)
11650 T ss_dssp CHHHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS-CHHHHHH
11651 T ss_pred CHHHHHHHHHCChHHHHHHHhcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCHHHHHHHHhcCC-CHHHHHH
11652 Confidence 333 333455678888888866 3678888999999999876455555555667888888888876 7888999
11653
11654
11655 Q NP_000290.2 704 ARLLLSDMWSSK 715 (747)
11656 Q Consensus 704 AL~aLsnL~~~~ 715 (747)
11657 ++.+|.+++...
11658 T Consensus 150 ~~~~l~~l~~~~ 161 (202)
11659 T 5MFO_E 150 ALWALSNIASGG 161 (202)
11660 T ss_dssp HHHHHHHHHTSC
11661 T ss_pred HHHHHHHHhcCH
11662 Confidence 999999998765
11663
11664
11665 No 289
11666 >2QNA_A Importin subunit beta-1, Snurportin-1; Nuclear transport, import of spliceosomal; HET: SO4; 2.84A {Homo sapiens}
11667 Probab=91.50 E-value=0.0073 Score=62.82 Aligned_cols=159 Identities=8% Similarity=0.020 Sum_probs=86.8 Template_Neff=13.200
11668
11669 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG--NSDVVRSGASLLSNMSRH 625 (747)
11670 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~--d~eVr~~AL~aLsnLa~~ 625 (747)
11671 .++.+...+....++.++..++.++..++..... ....+ -..+++.+...+.+. ++.++..++.++..++..
11672 T Consensus 525 ~~~~l~~~l~~~~~~~v~~~a~~~l~~l~~~~~~-----~~~~~-~~~i~~~l~~~l~~~~~~~~v~~~~~~~l~~l~~~ 598 (762)
11673 T 2QNA_A 525 FKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQS-----NIIPF-CDEVMQLLLENLGNENVHRSVKPQILSVFGDIALA 598 (762)
11674 T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhHH-----cchHh-HHhHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
11675 Confidence 4555665565224567788888888888754221 01111 135667777777765 567888899999888765
11676
11677
11678 Q NP_000290.2 626 -PLL-HRVMGNQVFPEVTRLLTSHTGN-----TSNSEDILSSACYTVRNLMASQPQLAKQYFS-----SSMLNNIINLCR 693 (747)
11679 Q Consensus 626 -~e~-~~ll~~giI~~Ll~LL~s~s~~-----~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve-----~giL~~Ll~LL~ 693 (747)
11680 ... ..++ ..+++.+...+...... ...+..++..++.++..++...+.....+.. ...++.++.++.
11681 T Consensus 599 ~~~~~~~~~-~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 677 (762)
11682 T 2QNA_A 599 IGGEFKKYL-EVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFID 677 (762)
11683 T ss_pred hhcchHHHH-HHHHHHHHHHHcCCCCCCCcccCCCCHHHHHHHHHHHHHHHHhCCCCCcCccccHHHHHhHHHHHHHHHH
11684 Confidence 211 1111 23445555554421000 0014566778888888887642221111100 011344444443
11685
11686
11687 Q NP_000290.2 694 ------SSASPKAAEAARLLLSDMWSS 714 (747)
11688 Q Consensus 694 ------s~~d~eVr~aAL~aLsnL~~~ 714 (747)
11689 +. +..++..++.+|..++..
11690 T Consensus 678 ~~~~~~~~-~~~~~~~a~~~l~~l~~~ 703 (762)
11691 T 2QNA_A 678 HIAGDEDH-TDGVVACAAGLIGDLCTA 703 (762)
11692 T ss_pred HHcCCCCC-CHHHHHHHHHHHHHHHHH
11693 Confidence 22 467788888888887754
11694
11695
11696 No 290
11697 >6G4J_B Probable serine/threonine-protein kinase YabT (E.C.2.7.11.1); Bacterial Hanks-type protein kinase, complex; 1.599A {Bacillus subtilis (strain 168)}
11698 Probab=91.47 E-value=0.008 Score=50.62 Aligned_cols=132 Identities=14% Similarity=0.147 Sum_probs=85.5 Template_Neff=11.300
11699
11700 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
11701 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
11702 ..+.+++++. +.++.++..++..+..+.. ...++.+..++.+.++.++..++.++..+...
11703 T Consensus 15 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~-- 75 (148)
11704 T 6G4J_B 15 KVEMYIKNLQ-DDSAVVRDYAAAALGKIGD----------------ERAVEPLIKALKDEDEYVRQSAAWALGEIGDE-- 75 (148)
11705 T ss_pred cHHHHHHHhc-CCCHHHHHHHHHHHHhhCC----------------HHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCH--
11706 Confidence 4566777777 4667777777777765532 12344556667677788888888888877542
11707
11708
11709 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
11710 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
11711 ..++.+...+.+ .++.++..++.++..+... ..++.+..++.+. ++.++..++.+
11712 T Consensus 76 -------~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a~~~ 130 (148)
11713 T 6G4J_B 76 -------RAVEPLIKALKD------EDPSVRLTAAEALGQIGGE-----------RVRAAMEKLAETG-TGFARKVAVNY 130 (148)
11714 T ss_pred -------HHHHHHHHHhcC------CCHHHHHHHHHHHHhhCCH-----------HHHHHHHHHhcCC-CHHHHHHHHHH
11715 Confidence 234455555554 3567888888888876531 2344555566555 67888999999
11716
11717
11718 Q NP_000290.2 708 LSDMWSSKELQGVLRQ 723 (747)
11719 Q Consensus 708 LsnL~~~~~~~~~~~~ 723 (747)
11720 |..+........-+++
11721 T Consensus 131 L~~~~~~~~~~~~~~~ 146 (148)
11722 T 6G4J_B 131 LETHKSLISGGGGSGG 146 (148)
11723 T ss_pred HHhhCCCChHhccccc
11724 Confidence 9888766555444443
11725
11726
11727 No 291
11728 >3W3W_A Importin subunit beta-3, Protein STE12; HEAT repeat, nuclear import, PROTEIN; 2.2A {Saccharomyces cerevisiae}
11729 Probab=91.29 E-value=0.0081 Score=65.72 Aligned_cols=98 Identities=9% Similarity=0.152 Sum_probs=58.6 Template_Neff=13.000
11730
11731 Q NP_000290.2 609 SDVVRSGASLLSNMSRHPL-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLN 686 (747)
11732 Q Consensus 609 ~eVr~~AL~aLsnLa~~~e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~ 686 (747)
11733 ..++..++.++..++.... . .... ..+++.+...+.+ .++.++..++.+|..++...+...... ...+++
11734 T Consensus 821 ~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~------~~~~~r~~a~~~l~~l~~~~~~~~~~~-~~~~~~ 892 (1078)
11735 T 3W3W_A 821 EDLLDEINKSIAAVLKTTNGHYLKNL-ENIWPMINTFLLD------NEPILVIFALVVIGDLIQYGGEQTASM-KNAFIP 892 (1078)
11736 T ss_dssp HHHHHHHHHHHHHHHHHHTTTHHHHH-GGGHHHHHHHHC--------CHHHHHHHHHHHHHHHTC--CCCHHH-HHHHHH
11737 T ss_pred HHHHHHHHHHHHHHHHhcccchHHHH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhcchhhHHH-HHhHHH
11738 Confidence 3455666677776665411 1 1111 2345556666554 356788888899988876432221111 124567
11739
11740
11741 Q NP_000290.2 687 NIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
11742 Q Consensus 687 ~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
11743 .+...+.+. ++.++..++.+|..++...
11744 T Consensus 893 ~l~~~l~~~-~~~vr~~a~~~l~~l~~~~ 920 (1078)
11745 T 3W3W_A 893 KVTECLISP-DARIRQAASYIIGVCAQYA 920 (1078)
11746 T ss_dssp HHHHHHTCS-CHHHHHHHHHHHHHHHHHS
11747 T ss_pred HHHHHhcCC-CHHHHHHHHHHHHHHHHHC
11748 Confidence 777777766 7889999999998888653
11749
11750
11751 No 292
11752 >3ND2_A Importin subunit beta-1; importin, karyopherin, nuclear import, receptor; 2.4A {Saccharomyces cerevisiae}
11753 Probab=91.23 E-value=0.0083 Score=63.25 Aligned_cols=152 Identities=13% Similarity=0.136 Sum_probs=86.1 Template_Neff=13.300
11754
11755 Q NP_000290.2 548 AIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
11756 Q Consensus 548 ~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
11757 .++.+...+.. .+ ..++..++.++..++..... .... .-..+++.+...+.+.++.++..++.++..++..
11758 T Consensus 598 ~~~~l~~~l~~-~~~~~v~~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~ 670 (861)
11759 T 3ND2_A 598 LMGLFFRLLEK-KDSAFIEDDVFYAISALAASLGK-----GFEK-YLETFSPYLLKALNQVDSPVSITAVGFIADISNSL 670 (861)
11760 T ss_dssp HHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHHGG-----GGGG-GHHHHHHHHHHHHTCTTSTHHHHHHHHHHHHHHHH
11761 T ss_pred HHHHHHHHHhc-CCCchhHHHHHHHHHHHHHHhhh-----hHHH-HHHhHHHHHHHHHcCCCchHHHHHHHHHHHHHHHc
11762 Confidence 45555666652 33 55777888888887754221 0111 1235677777777777778888999999988865
11763
11764
11765 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASP------ 698 (747)
11766 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~------ 698 (747)
11767 +.. .... ..+++.+...+... ..+..++..++.++..++...+....... ..+++.+...+... ..
11768 T Consensus 671 ~~~~~~~~-~~~~~~l~~~l~~~----~~~~~~r~~a~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~-~~~~~~~~ 743 (861)
11769 T 3ND2_A 671 EEDFRRYS-DAMMNVLAQMISNP----NARRELKPAVLSVFGDIASNIGADFIPYL-NDIMALCVAAQNTK-PENGTLEA 743 (861)
11770 T ss_dssp TTSSHHHH-HHHHHHHHHHHHCT----TCCTTHHHHHHHHHHHHHHHHGGGGGGGH-HHHHHHHHHHHTCC-CSSSSHHH
11771 T ss_pred chhhHHhH-HHHHHHHHHHHhCc----chhhhhHHHHHHHHHHHHHHcchhcHHHH-HHHHHHHHHHHccC-CCCCCHHH
11772 Confidence 211 1111 23555555555541 01467788888999888765332111111 23455555555433 21
11773
11774
11775 Q NP_000290.2 699 -----KAAEAARLLLSDMWS 713 (747)
11776 Q Consensus 699 -----eVr~aAL~aLsnL~~ 713 (747)
11777 .++..++.++..++.
11778 T Consensus 744 ~~~~~~~~~~~l~~l~~~~~ 763 (861)
11779 T 3ND2_A 744 LDYQIKVLEAVLDAYVGIVA 763 (861)
11780 T ss_dssp HHHHHHHHHHHHHHHHHHHH
11781 T ss_pred HHHHHHHHHHHHHHHHHHHH
11782 Confidence 455566666655443
11783
11784
11785 No 293
11786 >5OWU_A Importin subunit beta-1, Nucleoporin NUP1; nuclear transport, TRANSPORT PROTEIN; 2.0A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
11787 Probab=91.23 E-value=0.0083 Score=63.25 Aligned_cols=152 Identities=13% Similarity=0.136 Sum_probs=86.1 Template_Neff=13.300
11788
11789 Q NP_000290.2 548 AIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
11790 Q Consensus 548 ~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
11791 .++.+...+.. .+ ..++..++.++..++..... .... .-..+++.+...+.+.++.++..++.++..++..
11792 T Consensus 598 ~~~~l~~~l~~-~~~~~v~~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~ 670 (861)
11793 T 5OWU_A 598 LMGLFFRLLEK-KDSAFIEDDVFYAISALAASLGK-----GFEK-YLETFSPYLLKALNQVDSPVSITAVGFIADISNSL 670 (861)
11794 T ss_dssp HHHHHHHHHHS-TTGGGTHHHHHHHHHHHHHHHGG-----GGGG-GHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHHHHS
11795 T ss_pred HHHHHHHHHhc-CCCchhHHHHHHHHHHHHHHhhh-----hHHH-HHHhHHHHHHHHHcCCCchHHHHHHHHHHHHHHHc
11796 Confidence 45555666652 33 55777888888887754221 0111 1235677777777777778888999999988865
11797
11798
11799 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASP------ 698 (747)
11800 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~------ 698 (747)
11801 +.. .... ..+++.+...+... ..+..++..++.++..++...+....... ..+++.+...+... ..
11802 T Consensus 671 ~~~~~~~~-~~~~~~l~~~l~~~----~~~~~~r~~a~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~-~~~~~~~~ 743 (861)
11803 T 5OWU_A 671 EEDFRRYS-DAMMNVLAQMISNP----NARRELKPAVLSVFGDIASNIGADFIPYL-NDIMALCVAAQNTK-PENGTLEA 743 (861)
11804 T ss_dssp GGGGHHHH-HHHHHHHHHHHTCT----TCCTTHHHHHHHHHHHHHHHHGGGGHHHH-HHHHHHHHHHHTCC-CSSSSHHH
11805 T ss_pred chhhHHhH-HHHHHHHHHHHhCc----chhhhhHHHHHHHHHHHHHHcchhcHHHH-HHHHHHHHHHHccC-CCCCCHHH
11806 Confidence 211 1111 23555555555541 01467788888999888765332111111 23455555555433 21
11807
11808
11809 Q NP_000290.2 699 -----KAAEAARLLLSDMWS 713 (747)
11810 Q Consensus 699 -----eVr~aAL~aLsnL~~ 713 (747)
11811 .++..++.++..++.
11812 T Consensus 744 ~~~~~~~~~~~l~~l~~~~~ 763 (861)
11813 T 5OWU_A 744 LDYQIKVLEAVLDAYVGIVA 763 (861)
11814 T ss_dssp HHHHHHHHHHHHHHHHHHHH
11815 T ss_pred HHHHHHHHHHHHHHHHHHHH
11816 Confidence 455566666655443
11817
11818
11819 No 294
11820 >5DFZ_B Vacuolar protein sorting-associated protein 38; Vps34, Vps15, Vps30, Vps38, Autophagy; 4.4A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
11821 Probab=90.97 E-value=0.011 Score=70.63 Aligned_cols=159 Identities=14% Similarity=0.083 Sum_probs=104.1 Template_Neff=9.900
11822
11823 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATL-EACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL---QSGNSDVVRSGASLLSN 621 (747)
11824 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr-~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL---~s~d~eVr~~AL~aLsn 621 (747)
11825 ..+++.|+.+|. +.++.++ ..|+.+|..+...... ......+...++++.|+.+| .+.++.++..++.+|..
11826 T Consensus 463 ~~~i~~L~~~l~-d~~~~vR~~~a~~~L~~l~~~~~~---~~~~~~~~~~~~lp~Li~~L~~~~d~~~~vr~~aa~~l~~ 538 (1460)
11827 T 5DFZ_B 463 DRVVPYFVCCFE-DSDQDVQALSLLTLIQVLTSVRKL---NQLNENIFVDYLLPRLKRLLISNRQNTNYLRIVFANCLSD 538 (1460)
11828 T ss_pred ccchHHHHHHhc-CCCHHHHHHHHHHHHHHhcCCCCc---cCCccccCcCChHHHHHHHHHhccCCCHHHHHHHHHHHHH
11829 Confidence 457888999998 5788888 8999999988764221 00011223467899999999 88889999999999998
11830
11831
11832 Q NP_000290.2 622 MSRHP--L-----------L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNN 687 (747)
11833 Q Consensus 622 La~~~--e-----------~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~ 687 (747)
11834 +.... . . ...+..++++.+..++...- ...++.++..|+.+|..|+...... .....+++.
11835 T Consensus 539 ~~~~~~~~~l~~l~~~~~~~~~~~l~~~~~~~l~~ll~~~l--~d~~~~VR~~A~~aL~~l~~~~~~~---~~~~~~l~~ 613 (1460)
11836 T 5DFZ_B 539 LAIIINRFQEFTFAQHCNDNSSTKYSAKLIQSVEDLTVSFL--TDNDTYVKMALLQNILPLCKFFGRE---RTNDIILSH 613 (1460)
11837 T ss_pred HHHHcCHHHHHHHHHhcccChhHHHHcChHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHhcccccc---ccHHhHHHH
11838 Confidence 85430 0 0 01122234444444433200 0036789999999999987542111 111356778
11839
11840
11841 Q NP_000290.2 688 IINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
11842 Q Consensus 688 Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
11843 |+.++.+. ++.+|..|+.+|..+...
11844 T Consensus 614 Li~ll~d~-~~~VR~~a~~aL~~i~~~ 639 (1460)
11845 T 5DFZ_B 614 LITYLNDK-DPALRVSLIQTISGISIL 639 (1460)
11846 T ss_pred HHHHhcCC-CHHHHHHHHHHHHHHHhh
11847 Confidence 88888776 788888888888888763
11848
11849
11850 No 295
11851 >3W3U_A Importin subunit beta-3; HEAT repeat, nuclear import, PROTEIN; 2.6A {Saccharomyces cerevisiae}
11852 Probab=90.68 E-value=0.011 Score=64.69 Aligned_cols=157 Identities=9% Similarity=0.025 Sum_probs=84.5 Template_Neff=13.000
11853
11854 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
11855 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
11856 +++.++..+..+.+..++..++.+|..++..... . .... .-..+++.+...+.+.++.++..++.+|..++....
11857 T Consensus 440 ~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~ 514 (1078)
11858 T 3W3U_A 440 ILPALISKLTSECTSRVQTHAAAALVAFSEFASK---D-ILEP-YLDSLLTNLLVLLQSNKLYVQEQALTTIAFIAEAAK 514 (1078)
11859 T ss_dssp HHHHHHHHSSTTSCHHHHHHHHHHHHHHHTTCCH---H-HHGG-GHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHG
11860 T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCh---h-hhHH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhH
11861 Confidence 4555666665224566777888888888764221 0 0111 123566677777777778888899999988876521
11862
11863
11864 Q NP_000290.2 628 -LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR---SSASPKAAEA 703 (747)
11865 Q Consensus 628 -~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~---s~~d~eVr~a 703 (747)
11866 ........+++.+...+.... ..++.++..++.++..+................++.+..++. +. +..++..
11867 T Consensus 515 ~~~~~~~~~~~~~l~~~l~~~~---~~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~ 590 (1078)
11868 T 3W3U_A 515 NKFIKYYDTLMPLLLNVLKVNN---KDNSVLKGKCMECATLIGFAVGKEKFHEHSQELISILVALQNSDIDE-DDALRSY 590 (1078)
11869 T ss_dssp GGGGGGHHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHTSSCCC-CHHHHHH
11870 T ss_pred HhHHHHHhhHHHHHHHHHhcCC---CCcchHHHHHHHHHHHHHHHHCHHHhHHHHHHHHHHHHHHhcCCCCC-CHHHHHH
11871 Confidence 111111234555555554310 014567777888888776532111100011123444444444 23 4566777
11872
11873
11874 Q NP_000290.2 704 ARLLLSDMWS 713 (747)
11875 Q Consensus 704 AL~aLsnL~~ 713 (747)
11876 ++.++..++.
11877 T Consensus 591 ~~~~l~~l~~ 600 (1078)
11878 T 3W3U_A 591 LEQSWSRICR 600 (1078)
11879 T ss_dssp HHHHHHHHHH
11880 T ss_pred HHHHHHHHHH
11881 Confidence 7777766654
11882
11883
11884 No 296
11885 >1QGR_A IMPORTIN BETA SUBUNIT, IMPORTIN ALPHA-2; TRANSPORT RECEPTOR, NUCLEAR IMPORT, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.1
11886 Probab=90.57 E-value=0.011 Score=62.78 Aligned_cols=113 Identities=11% Similarity=0.140 Sum_probs=66.6 Template_Neff=13.000
11887
11888 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL-E 324 (747)
11889 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~-~ 324 (747)
11890 +++.+...+.+.++.++..++.++..++..............+++.+...+.+.+..++..++.++..++........ .
11891 T Consensus 367 ~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~ 446 (876)
11892 T 1QGR_A 367 VLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAIND 446 (876)
11893 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCHHhcHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCChhhcCC
11894 Confidence 344444555556677788888888887764322111111234556666666666778888899998888764432110 1
11895
11896
11897 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
11898 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
11899 .....+++.+...+. + ++.++..++.++..+...
11900 T Consensus 447 ~~~~~~~~~l~~~l~-~-~~~v~~~a~~~l~~l~~~ 480 (876)
11901 T 1QGR_A 447 VYLAPLLQCLIEGLS-A-EPRVASNVCWAFSSLAEA 480 (876)
11902 T ss_pred chHHHHHHHHHHHhc-C-CHHHHHHHHHHHHHHHHH
11903 Confidence 112245566666665 3 566777777777777653
11904
11905
11906 No 297
11907 >4QMH_A LP04448p; PROTEIN BINDING, TOG DOMAIN; 1.652A {Drosophila melanogaster}
11908 Probab=90.39 E-value=0.012 Score=51.77 Aligned_cols=149 Identities=9% Similarity=0.047 Sum_probs=95.9 Template_Neff=12.700
11909
11910 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
11911 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
11912 .++.+...+. +.++.++..++.++..++..... .... .-..+++.+...+.+.+..++..++.+|..++....
11913 T Consensus 58 ~~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 130 (241)
11914 T 4QMH_A 58 LAPALAHRLV-DSNAKIAQTTLAICEQLATAMGA-----GCRN-HVRNLFPGFLHALGDNKSFVRAAALNCINSFGEKGG 130 (241)
11915 T ss_dssp HHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHHGG-----GGGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHC
11916 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHhcH-----HHHH-HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhcC
11917 Confidence 4556666676 46778888999999988764221 1111 113566777777777777788888888888775421
11918
11919
11920 Q NP_000290.2 628 LHRVMGNQVFPE--VTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK-QYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
11921 Q Consensus 628 ~~~ll~~giI~~--Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~-~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
11922 . ..+++. +...+.+ .++.++..++.++..++...+.... ......+++.+...+.+. ++.++..+
11923 T Consensus 131 ~-----~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a 198 (241)
11924 T 4QMH_A 131 Y-----KEFFESEMIADALKG------GSPALKTELWAWLADKLPGLPPKSVSKEDIHSMVPHLYAHICDR-NADVRKNA 198 (241)
11925 T ss_dssp S-----GGGSSTTHHHHHHHT------CCHHHHHHHHHHHHHHGGGSCGGGSCHHHHHHHHHHHHHHTTCS-SHHHHHHH
11926 T ss_pred h-----HHhcCHHHHHHHHhC------CCHHHHHHHHHHHHHhccCCCcccCCHHHHHhHHHHHHHHHhCC-CHHHHHHH
11927 Confidence 1 123333 5555554 3677888899999888764322110 011124567777777766 78899999
11928
11929
11930 Q NP_000290.2 705 RLLLSDMWSSK 715 (747)
11931 Q Consensus 705 L~aLsnL~~~~ 715 (747)
11932 +.++..+....
11933 T Consensus 199 ~~~l~~l~~~~ 209 (241)
11934 T 4QMH_A 199 NEAVLGIMIHL 209 (241)
11935 T ss_dssp HHHHHHHHHHH
11936 T ss_pred HHHHHHHHHHh
11937 Confidence 99998887543
11938
11939
11940 No 298
11941 >5A1V_E ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT; TRANSPORT PROTEIN, COPI, COATOMER, COATED; 21.0A {SACCHAROMYCES CEREVISIAE}
11942 Probab=90.35 E-value=0.013 Score=64.93 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=64.4 Template_Neff=10.900
11943
11944 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
11945 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
11946 ..++..+...+.+.+..++..+..++..+....+.. ..+++.+...+.+.+..++..++.++..+....
11947 T Consensus 67 ~~l~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~------~~i~~~l~~~L~~~~~~vr~~al~~L~~~~~~~----- 135 (874)
11948 T 5A1V_E 67 TEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV------IIVTSSLTKDMTGKEDNYRGPAVRALCQITDST----- 135 (874)
11949 T ss_dssp HHHHHHHHHGGGSCCHHHHHHHHHHHHHHHTSCSCG------GGHHHHHHHHHHSSSHHHHHHHHHHHHHHCCHH-----
11950 T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHhcccCchH------hHHHHHHHHhcCCCChhhHHHHHHHHhhcCCHH-----
11951 Confidence 345556666677777788888888887776532211 234555666666667778888888887664211
11952
11953
11954 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
11955 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
11956 ....++..+...+. +.++.++..++.++..+..
11957 T Consensus 136 --~~~~l~~~l~~~l~-d~~~~Vr~~a~~~l~~l~~ 168 (874)
11958 T 5A1V_E 136 --MLQAVERYMKQAIV-DKVPSVSSSALVSSLHLLK 168 (874)
11959 T ss_dssp --HHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHH
11960 T ss_pred --HHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHh
11961 Confidence 01234455555665 5567788888888887765
11962
11963
11964 No 299
11965 >5NZR_G Coatomer subunit alpha, Coatomer subunit; COPI, coatomer, coated vesicles, Transport; 9.2A {Mus musculus}
11966 Probab=90.35 E-value=0.013 Score=64.93 Aligned_cols=102 Identities=12% Similarity=0.008 Sum_probs=64.4 Template_Neff=10.900
11967
11968 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
11969 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
11970 ..++..+...+.+.+..++..+..++..+....+.. ..+++.+...+.+.+..++..++.++..+....
11971 T Consensus 67 ~~l~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~------~~i~~~l~~~L~~~~~~vr~~al~~L~~~~~~~----- 135 (874)
11972 T 5NZR_G 67 TEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDV------IIVTSSLTKDMTGKEDNYRGPAVRALCQITDST----- 135 (874)
11973 T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHhcccCchH------hHHHHHHHHhcCCCChhhHHHHHHHHhhcCCHH-----
11974 Confidence 345556666677777788888888887776532211 234555666666667778888888887664211
11975
11976
11977 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
11978 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
11979 ....++..+...+. +.++.++..++.++..+..
11980 T Consensus 136 --~~~~l~~~l~~~l~-d~~~~Vr~~a~~~l~~l~~ 168 (874)
11981 T 5NZR_G 136 --MLQAVERYMKQAIV-DKVPSVSSSALVSSLHLLK 168 (874)
11982 T ss_pred --HHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHh
11983 Confidence 01234455555665 5567788888888887765
11984
11985
11986 No 300
11987 >3W3W_A Importin subunit beta-3, Protein STE12; HEAT repeat, nuclear import, PROTEIN; 2.2A {Saccharomyces cerevisiae}
11988 Probab=90.26 E-value=0.013 Score=64.05 Aligned_cols=157 Identities=10% Similarity=0.054 Sum_probs=83.5 Template_Neff=13.000
11989
11990 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
11991 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
11992 ..++.++..+....++.++..++.+|..++..... . .... .-..+++.+...+.+.++.++..++.++..++...
11993 T Consensus 439 ~~~~~l~~~l~~~~~~~~r~~a~~~l~~l~~~~~~---~-~~~~-~~~~i~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~ 513 (1078)
11994 T 3W3W_A 439 RILPALISKLTSECTSRVQTHAAAALVNFSEFASK---D-ILEP-YLDSLLTNLLVLLQSNKLYVQEQALTTIAFIAEAA 513 (1078)
11995 T ss_dssp HHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTCCH---H-HHGG-GHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH
11996 T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHHHhcCCh---h-hHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
11997 Confidence 35566666665224567778888888887764221 0 0011 11355666777777667788888999998887652
11998
11999
12000 Q NP_000290.2 627 L-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCR---SSASPKA 700 (747)
12001 Q Consensus 627 e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~---s~~d~eV 700 (747)
12002 . . .... ..+++.+...+.... ..++.++..++.++..++.... ...... ...++..+...+. +. +..+
12003 T Consensus 514 ~~~~~~~~-~~~~~~l~~~l~~~~---~~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~-~~~v 587 (1078)
12004 T 3W3W_A 514 KNKFIKYY-DTLMPLLLNVLKVNN---KDNSVLKGKCMECATLIGFAVGKEKFHEH-SQELISILVALQNSDIDE-DDAL 587 (1078)
12005 T ss_dssp GGGGGGGH-HHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHHHCHHHHTTT-HHHHHHHHHHHHTCC------HH
12006 T ss_pred HHhHHHHH-HhHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHHHHHChhhhhHH-HHHHHHHHHHHhCCCCCC-chHH
12007 Confidence 1 1 1111 234555555554310 0145677778888888765321 111111 1123444444444 23 4566
12008
12009
12010 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
12011 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
12012 +..++.++..++..
12013 T Consensus 588 ~~~~~~~l~~l~~~ 601 (1078)
12014 T 3W3W_A 588 RSYLEQSWSRICRI 601 (1078)
12015 T ss_dssp HHHHHHHHHHHHHH
12016 T ss_pred HHHHHHHHHHHHHH
12017 Confidence 77777777666543
12018
12019
12020 No 301
12021 >5H2V_A Importin subunit beta-3, Ubiquitin-like-specific protease; nuclear import, PROTEIN TRANSPORT-HYDROLASE complex; 2.8A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
12022 Probab=90.24 E-value=0.013 Score=64.03 Aligned_cols=158 Identities=9% Similarity=0.045 Sum_probs=84.1 Template_Neff=13.000
12023
12024 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
12025 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
12026 ..++.++..+....++.++..++.+|..++..... . .... .-..+++.+...+.+.++.++..++.++..++...
12027 T Consensus 439 ~~~~~l~~~l~~~~~~~~~~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~l~~~~ 513 (1078)
12028 T 5H2V_A 439 RILPALISKLTSECTSRVQTHAAAALVNFSEFASK---D-ILEP-YLDSLLTNLLVLLQSNKLYVQEQALTTIAFIAEAA 513 (1078)
12029 T ss_dssp HHHHHHHHTTSTTSCHHHHHHHHHHHHHHHTTCCH---H-HHGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHH
12030 T ss_pred hHHHHHHHHcccCCCHHHHHHHHHHHHHHHhcCCh---h-hHHH-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh
12031 Confidence 35566666665224567778888888888764221 0 0011 12356666777777677788889999998887652
12032
12033
12034 Q NP_000290.2 627 L-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR---SSASPKAA 701 (747)
12035 Q Consensus 627 e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~---s~~d~eVr 701 (747)
12036 . . .... ..+++.+...+.... ..++.++..++.++..++..............+++.+...+. +. +..++
12037 T Consensus 514 ~~~~~~~~-~~~~~~l~~~l~~~~---~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~v~ 588 (1078)
12038 T 5H2V_A 514 KNKFIKYY-DTLMPLLLNVLKVNN---KDNSVLKGKCMECATLIGFAVGKEKFHEHSQELISILVALQNSDIDE-DDALR 588 (1078)
12039 T ss_dssp GGGGGGGH-HHHHHHHHHHHTCC-------HHHHHHHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHTCC------CHH
12040 T ss_pred HHHHHHHH-HhHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHHHHHCchhhhHHHHHHHHHHHHHhCCCCCC-chHHH
12041 Confidence 1 1 1111 234555555554310 014567778888888876532111000011123444444444 23 45666
12042
12043
12044 Q NP_000290.2 702 EAARLLLSDMWSS 714 (747)
12045 Q Consensus 702 ~aAL~aLsnL~~~ 714 (747)
12046 ..++.++..++..
12047 T Consensus 589 ~~~~~~l~~l~~~ 601 (1078)
12048 T 5H2V_A 589 SYLEQSWSRICRI 601 (1078)
12049 T ss_dssp HHHHHHHHHHHHH
12050 T ss_pred HHHHHHHHHHHHH
12051 Confidence 7777777666543
12052
12053
12054 No 302
12055 >4NEE_G AP-2 complex subunit sigma, AP-2; clathrin Adaptor AP-2, HIV-1 Nef; 2.8841A {Rattus norvegicus}
12056 Probab=90.08 E-value=0.014 Score=56.75 Aligned_cols=141 Identities=15% Similarity=0.147 Sum_probs=95.0 Template_Neff=12.000
12057
12058 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12059 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12060 .++.++.++. ++++.++..++.+|..+....+. . ...+++.+...+.+.++.++..++.+++.+.....
12061 T Consensus 77 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~~ 145 (398)
12062 T 4NEE_G 77 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE--------L--IRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 145 (398)
12063 T ss_dssp CHHHHHHHHT-CSSHHHHHHHHHHHHHSCCCCHH--------H--HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCHHH
12064 T ss_pred hHHHHHHHHc-CCCccHHHHHHHHHHHHcCCCHH--------H--HHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHH
12065 Confidence 4566777777 46778888888888888764221 1 12356667777777888899999999988764311
12066
12067
12068 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
12069 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
12070 ...+++.+..++ .+ .++.++..++.+|..+....+.. +.....++.+...+.+. ++.++..++
12071 T Consensus 146 -----~~~~~~~l~~~l~~~~------~~~~vr~~a~~~L~~l~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~ 210 (398)
12072 T 4NEE_G 146 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLLNDQ-HLGVVTAAT 210 (398)
12073 T ss_dssp -----HHHHTTHHHHHHHCSS------SCHHHHHHHHHHHHHHHHHCGGG---SCCSSHHHHHHGGGGCS-CHHHHHHHH
12074 T ss_pred -----HHHHHHhHHHHHhcCC------CCHHHHHHHHHHHHHHHHHChhh---ccccchHHHHHHHhcCC-CHHHHHHHH
12075 Confidence 112455566666 54 36788999999999987643221 11234567777777665 678888888
12076
12077
12078 Q NP_000290.2 706 LLLSDMWSS 714 (747)
12079 Q Consensus 706 ~aLsnL~~~ 714 (747)
12080 .+|..+...
12081 T Consensus 211 ~~l~~l~~~ 219 (398)
12082 T 4NEE_G 211 SLITTLAQK 219 (398)
12083 T ss_dssp HHHHHHHHH
12084 T ss_pred HHHHHHHHh
12085 Confidence 888887764
12086
12087
12088 No 303
12089 >6MQ5_A CLIP-associating protein 1; Microtubule Plus End Binding, STRUCTURAL; HET: MSE; 2.146A {Homo sapiens}
12090 Probab=89.98 E-value=0.015 Score=52.93 Aligned_cols=111 Identities=16% Similarity=0.126 Sum_probs=61.3 Template_Neff=11.900
12091
12092 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQL----IGLKEKGLPQIA-RLLQSGNSDVVRSGASLLSNM 622 (747)
12093 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~----llie~giI~~Ll-~LL~s~d~eVr~~AL~aLsnL 622 (747)
12094 .++.++..+. +.++.++..++..|..++..... ... ......+++.+. .++.+.++.++..++.++..+
12095 T Consensus 4 ~l~~l~~~l~-~~~~~~r~~a~~~L~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~l~d~~~~vr~~a~~~l~~l 77 (257)
12096 T 6MQ5_A 4 RMESCLAQVL-QKDVGKRLQVGQELIDYFSDKQK-----SADLEHDQTMLDKLVDGLATSWVNSSNYKVVLLGMDILSAL 77 (257)
12097 T ss_dssp SHHHHHHHHH-CCCHHHHHHHHHHHHHHHHCTTT-----TTTTTTCHHHHHHHHHHCCCCCTTCSSHHHHHHHHHHHHHH
12098 T ss_pred hHHHHHHHHh-cCCHHHHHHHHHHHHHHHhcccc-----ccccccCHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
12099 Confidence 3555666676 46778888888888888764321 010 001234555555 456667778888899988888
12100
12101
12102 Q NP_000290.2 623 SRHP-LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
12103 Q Consensus 623 a~~~-e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
12104 +... .........+++.++..+.+ .+..++..++.+|..+..
12105 T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~ 120 (257)
12106 T 6MQ5_A 78 VTRLQDRFKAQIGTVLPSLIDRLGD------AKDSVREQDQTLLLKIMD 120 (257)
12107 T ss_dssp HHHHGGGGHHHHHHHHHHHHHHTTC------SCHHHHHHHHHHHHHHHH
12108 T ss_pred HHHhHHHHHHHHHhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
12109 Confidence 7651 11000111244444444443 234455555555555543
12110
12111
12112 No 304
12113 >4UQI_B AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ENDOCYTOSIS, PROTEIN TRANSPORT, LIPID BINDING; HET: IHP; 2.79A {RATTUS NORVEGICUS}
12114 Probab=89.98 E-value=0.015 Score=60.62 Aligned_cols=109 Identities=11% Similarity=0.011 Sum_probs=67.1 Template_Neff=12.200
12115
12116 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
12117 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
12118 .+++.+...+.+.++.++..++.++..+....+..........+++.+...+.+.+..++..++.++..+.......
12119 T Consensus 160 ~~~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~~~~~~~--- 236 (657)
12120 T 4UQI_B 160 GFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDRE--- 236 (657)
12121 T ss_pred chHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCChhhhhhhhhcHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCHHH---
12122 Confidence 34556666666777788888888888887653321111112345566666666666677777888887776432211
12123
12124
12125 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
12126 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
12127 ...+++.+...+. +.++.++..++.++..+..
12128 T Consensus 237 --~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~ 268 (657)
12129 T 4UQI_B 237 --AQSICERVTPRLS-HANSAVVLSAVKVLMKFLE 268 (657)
12130 T ss_pred --HHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHh
12131 Confidence 1234555556665 4566778888888877765
12132
12133
12134 No 305
12135 >4XRI_A Importin Beta; Transport Protein, Nuclear Transport, Transport; HET: GOL, SO4; 2.05A {Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)}
12136 Probab=89.95 E-value=0.014 Score=61.52 Aligned_cols=159 Identities=9% Similarity=0.055 Sum_probs=88.2 Template_Neff=13.300
12137
12138 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQS--GNSDVVRSGASLLSNMSRH 625 (747)
12139 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s--~d~eVr~~AL~aLsnLa~~ 625 (747)
12140 +++.+...+....+..++..++.++..++..... ....+ -..+++.+...+.+ .+..++..++.++..++..
12141 T Consensus 651 ~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~l~~~ 724 (882)
12142 T 4XRI_A 651 FAPFLYNALGNQEEPSLCSMAIGLVSDVTRSLGE-----RSQPY-CDNFMNYLLGNLRSTTLANQFKPAILQCFGDIASA 724 (882)
12143 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhh-----ccHhh-HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
12144 Confidence 4566666665214566777888888877654221 01111 13466677777766 5677888999999988865
12145
12146
12147 Q NP_000290.2 626 -PLL-HRVMGNQVFPEVTRLLTSHTGN------TSNSEDILSSACYTVRNLMASQPQL-----AKQYFSSSMLNNIINLC 692 (747)
12148 Q Consensus 626 -~e~-~~ll~~giI~~Ll~LL~s~s~~------~~~d~eVr~~Al~aLsnLa~~s~e~-----~~~Lve~giL~~Ll~LL 692 (747)
12149 +.. ..++ ..+++.+...+...... ......++..++.++..++...... ...+. ..+++.+...+
12150 T Consensus 725 ~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~-~~i~~~l~~~~ 802 (882)
12151 T 4XRI_A 725 IGGHFETYL-TIVAQVLQQAATITAGPDGSYEMIDYVISLREGIMDAWGGIIGAMKTSNKTNVLQPYV-ESIFALLNSIA 802 (882)
12152 T ss_pred CCcccHhHH-HHHHHHHHHHhcCCCCCCCCccccccCHHHHHHHHHHHHHHHHhcChhcchhhchhcH-HhHHHHHHHHh
12153 Confidence 211 1111 22444444444321000 0003456667777777776532211 11111 23456666666
12154
12155
12156 Q NP_000290.2 693 RSSAS--PKAAEAARLLLSDMWSSK 715 (747)
12157 Q Consensus 693 ~s~~d--~eVr~aAL~aLsnL~~~~ 715 (747)
12158 .+. + ..++..++.++..++...
12159 T Consensus 803 ~~~-~~~~~vr~~a~~~l~~l~~~~ 826 (882)
12160 T 4XRI_A 803 NDP-NRSEALMRASMGVIGDLADAY 826 (882)
12161 T ss_pred cCC-CCCHHHHHHHHHHHHHHHHHh
12162 Confidence 654 4 788889999998887543
12163
12164
12165 No 306
12166 >4NEE_B AP-2 complex subunit sigma, AP-2; clathrin Adaptor AP-2, HIV-1 Nef; 2.8841A {Rattus norvegicus}
12167 Probab=89.83 E-value=0.016 Score=56.57 Aligned_cols=141 Identities=15% Similarity=0.147 Sum_probs=94.8 Template_Neff=11.900
12168
12169 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12170 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12171 .++.++.++. +++..++..++.+|..+....+. . ...+++.+...+.+.++.++..++.+|+.+.....
12172 T Consensus 77 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~~ 145 (398)
12173 T 4NEE_B 77 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE--------L--IRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 145 (398)
12174 T ss_pred hHHHHHHHhc-CCCHHHHHHHHHHHHHhcccCHH--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCHHH
12175 Confidence 4566777776 46778888888888888764221 1 12356667777777888899999999987764311
12176
12177
12178 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
12179 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
12180 ...+++.+..++ .+ .++.++..++.+|..+....+.. +.....++.+...+.+. ++.++..++
12181 T Consensus 146 -----~~~~~~~l~~~l~~~~------~~~~vr~~a~~~L~~l~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~ 210 (398)
12182 T 4NEE_B 146 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLLNDQ-HLGVVTAAT 210 (398)
12183 T ss_pred -----HHHHHHHHHHHHcCCC------CCHHHHHHHHHHHHHHHHHChhH---hcHhhHHHHHHHHhcCC-CHHHHHHHH
12184 Confidence 112455566666 54 36788999999999987643221 11234567777777665 778888888
12185
12186
12187 Q NP_000290.2 706 LLLSDMWSS 714 (747)
12188 Q Consensus 706 ~aLsnL~~~ 714 (747)
12189 .+|..+...
12190 T Consensus 211 ~~l~~l~~~ 219 (398)
12191 T 4NEE_B 211 SLITTLAQK 219 (398)
12192 T ss_pred HHHHHHHHh
12193 Confidence 888887764
12194
12195
12196 No 307
12197 >6EN4_C Splicing factor 3B subunit 3; Protein complex, splicing modulator, SPLICING; HET: BGZ; 3.08A {Homo sapiens}
12198 Probab=89.78 E-value=0.015 Score=61.60 Aligned_cols=153 Identities=8% Similarity=0.015 Sum_probs=85.9 Template_Neff=12.900
12199
12200 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12201 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12202 .+..+...+. +....++..++.++..+...... ...... ....+++.+...+.+. ..++..++.+|..++....
12203 T Consensus 397 ~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~---~~~~~~-~~~~~~~~l~~~l~~~-~~~~~~a~~~l~~l~~~~~ 470 (852)
12204 T 6EN4_C 397 IISRIVDDLK-DEAEQYRKMVMETIEKIMGNLGA---ADIDHK-LEEQLIDGILYAFQEQ-TTEDSVMLNGFGTVVNALG 470 (852)
12205 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCCh---hhcCHH-HHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHcCC
12206 Confidence 3445555555 34556677777777777653221 000011 1123445555555433 4677888888888876521
12207
12208
12209 Q NP_000290.2 628 -L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
12210 Q Consensus 628 -~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
12211 . .... ..+++.+...+.+ .++.++..++.++..++..............+++.+...+.+. +..++..++
12212 T Consensus 471 ~~~~~~~-~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v~~~a~ 542 (852)
12213 T 6EN4_C 471 KRVKPYL-PQICGTVLWRLNN------KSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEE-YPEVLGSIL 542 (852)
12214 T ss_pred hhhHHHH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhChhhcCHHHHHhHHHHHHHHccCC-CHHHHHHHH
12215 Confidence 1 1111 2345556666655 3678888999999988864322111112223566666666655 667788888
12216
12217
12218 Q NP_000290.2 706 LLLSDMWSS 714 (747)
12219 Q Consensus 706 ~aLsnL~~~ 714 (747)
12220 .++..++..
12221 T Consensus 543 ~~l~~l~~~ 551 (852)
12222 T 6EN4_C 543 GALKAIVNV 551 (852)
12223 T ss_pred HHHHHHHHh
12224 Confidence 888777654
12225
12226
12227 No 308
12228 >5A1V_E ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT; TRANSPORT PROTEIN, COPI, COATOMER, COATED; 21.0A {SACCHAROMYCES CEREVISIAE}
12229 Probab=89.57 E-value=0.018 Score=63.83 Aligned_cols=141 Identities=10% Similarity=0.100 Sum_probs=80.8 Template_Neff=10.900
12230
12231 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQS-GNSDVVRSGASLLSNMSRHP 626 (747)
12232 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s-~d~eVr~~AL~aLsnLa~~~ 626 (747)
12233 .++.|+.++.......++..++.++..++...+. .....+..|...+.+ ..+.++..++++|+.+....
12234 T Consensus 397 ~~~~L~~~L~~~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~l~~L~~~l~~~~~~~~~~~a~~~L~~~~~~~ 466 (874)
12235 T 5A1V_E 397 LMNFLFTMLREEGGFEYKRAIVDCIISIIEENSE----------SKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKT 466 (874)
12236 T ss_dssp HHHHHHHHHHHHSSSSHHHHHHHHHHHHTTTTHH----------HHHHHHHHHHTSCSSSSCHHHHHHHHHHHHHHCCSS
12237 T ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHHHCHH----------HHHHHHHHHHHHHHhcCCHHHHHHHHHHhcccccCC
12238 Confidence 4555666665222233566677777776653221 112345556666553 34566777777777665431
12239
12240
12241 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
12242 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
12243 .. ...+++.+...+.+ .++.++..++.+|..+....+. ....++..|..++.+. +..++..|..
12244 T Consensus 467 ~~----~~~~l~~l~~~l~~------~~~~vr~~al~aL~~l~~~~~~-----~~~~i~~~L~~~l~d~-~~~vR~~A~~ 530 (874)
12245 T 5A1V_E 467 NN----PSKYIRFIYNRVVL------EHEEVRAGAVSALAKFGAQNEE-----MLPSILVLLKRCVMDD-DNEVRDRATF 530 (874)
12246 T ss_dssp SC----HHHHHHHHHHHHHT------SCHHHHHHHHHHHHHHHHHCGG-----GHHHHHHHHHSTTTSS-SSHHHHHHHH
12247 T ss_pred CC----HHHHHHHHHHhhcc------CCHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHccCC-CHHHHHHHHH
12248 Confidence 11 01244555555554 3567888888888888764221 1123455555666555 7788888888
12249
12250
12251 Q NP_000290.2 707 LLSDMWSS 714 (747)
12252 Q Consensus 707 aLsnL~~~ 714 (747)
12253 ++..+...
12254 T Consensus 531 ~l~~l~~~ 538 (874)
12255 T 5A1V_E 531 YLNVLEQK 538 (874)
12256 T ss_dssp HHHHHHTS
12257 T ss_pred HHHHHHHh
12258 Confidence 88876654
12259
12260
12261 No 309
12262 >5NZR_G Coatomer subunit alpha, Coatomer subunit; COPI, coatomer, coated vesicles, Transport; 9.2A {Mus musculus}
12263 Probab=89.57 E-value=0.018 Score=63.83 Aligned_cols=141 Identities=10% Similarity=0.100 Sum_probs=80.8 Template_Neff=10.900
12264
12265 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQS-GNSDVVRSGASLLSNMSRHP 626 (747)
12266 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s-~d~eVr~~AL~aLsnLa~~~ 626 (747)
12267 .++.|+.++.......++..++.++..++...+. .....+..|...+.+ ..+.++..++++|+.+....
12268 T Consensus 397 ~~~~L~~~L~~~~~~~vr~~a~~~l~~l~~~~~~----------~~~~~l~~L~~~l~~~~~~~~~~~a~~~L~~~~~~~ 466 (874)
12269 T 5NZR_G 397 LMNFLFTMLREEGGFEYKRAIVDCIISIIEENSE----------SKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKT 466 (874)
12270 T ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHHHCHH----------HHHHHHHHHHHHHHhcCCHHHHHHHHHHhcccccCC
12271 Confidence 4555666665222233566677777776653221 112345556666553 34566777777777665431
12272
12273
12274 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
12275 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
12276 .. ...+++.+...+.+ .++.++..++.+|..+....+. ....++..|..++.+. +..++..|..
12277 T Consensus 467 ~~----~~~~l~~l~~~l~~------~~~~vr~~al~aL~~l~~~~~~-----~~~~i~~~L~~~l~d~-~~~vR~~A~~ 530 (874)
12278 T 5NZR_G 467 NN----PSKYIRFIYNRVVL------EHEEVRAGAVSALAKFGAQNEE-----MLPSILVLLKRCVMDD-DNEVRDRATF 530 (874)
12279 T ss_pred CC----HHHHHHHHHHhhcc------CCHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHccCC-CHHHHHHHHH
12280 Confidence 11 01244555555554 3567888888888888764221 1123455555666555 7788888888
12281
12282
12283 Q NP_000290.2 707 LLSDMWSS 714 (747)
12284 Q Consensus 707 aLsnL~~~ 714 (747)
12285 ++..+...
12286 T Consensus 531 ~l~~l~~~ 538 (874)
12287 T 5NZR_G 531 YLNVLEQK 538 (874)
12288 T ss_pred HHHHHHHh
12289 Confidence 88876654
12290
12291
12292 No 310
12293 >6OWT_A AP-2 complex subunit alpha, AP-2; AP, HIV, Nef, trafficking, Protein;{Rattus norvegicus}
12294 Probab=89.50 E-value=0.018 Score=64.23 Aligned_cols=98 Identities=19% Similarity=0.075 Sum_probs=57.2 Template_Neff=11.000
12295
12296 Q NP_000290.2 250 AVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQN 329 (747)
12297 Q Consensus 250 Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~~ 329 (747)
12298 ++.++.+.+...+..+...+..+....... ...++..+...+.+.++.++..++.++..+.... ....
12299 T Consensus 79 l~~ll~s~~~~~r~~~~~~l~~l~~~~~~~-----~~~ii~~l~~~l~~~~~~vr~~Al~~l~~~~~~~-------~~~~ 146 (939)
12300 T 6OWT_A 79 AVNLLSSNRYTEKQIGYLFISVLVNSNSEL-----IRLINNAIKNDLASRNPTFMGLALHCIANVGSRE-------MAEA 146 (939)
12301 T ss_pred HHHHhcCCCHHHHHHHHHHHHHHccCChHH-----HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCHH-------HHHH
12302 Confidence 334455555566666666666655432211 1134455556666667778888888887765321 1123
12303
12304
12305 Q NP_000290.2 330 GIREAVSLL--RRTGNAEIQKQLTGLLWNLSST 360 (747)
12306 Q Consensus 330 IL~~Ll~lL--~ss~d~eVr~~AL~aLsnLas~ 360 (747)
12307 ++..+...+ . +.++.++..++.++..+...
12308 T Consensus 147 l~~~l~~~l~~~-~~~~~vR~~a~~~L~~l~~~ 178 (939)
12309 T 6OWT_A 147 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRT 178 (939)
12310 T ss_pred HHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHH
12311 Confidence 444555555 4 45677888888888887763
12312
12313
12314 No 311
12315 >5KC2_B Phosphatidylinositol 3-kinase VPS34 (E.C.2.7.1.137), Serine/threonine-protein; autophagy, phosphatidylinositol 3-kinase (PtdIns3K), endocytosis; 28.0A {Saccharomyces cerevisiae}
12316 Probab=89.34 E-value=0.021 Score=68.25 Aligned_cols=151 Identities=13% Similarity=0.081 Sum_probs=101.4 Template_Neff=9.500
12317
12318 Q NP_000290.2 548 AI-RTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
12319 Q Consensus 548 ~I-~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
12320 ++ +.|+.++. + .+..++..++..|..+....+. .. ....+++.|...|.+.++.++..++.+|..++..
12321 T Consensus 424 ~~~p~l~~ll~-~~~d~~~R~~al~~L~~~~~~~~~-------~~-~~~~i~p~l~~~l~d~~~~vr~~a~~~l~~l~~~ 494 (1454)
12322 T 5KC2_B 424 LFISYLSHSIR-SIVSTATKLKNLELLAVFAQFVSD-------EN-KIDRVVPYFVCCFEDSDQDVQALSLLTLIQVLTS 494 (1454)
12323 T ss_pred HhHHHHHHHhc-CCCCHHHHHHHHHHHHHHhhhCCH-------HH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
12324 Confidence 56 88999998 5 6777888888888887763221 11 2235688888888888999999999999999821
12325
12326
12327 Q NP_000290.2 626 ----PLL-HRVMGNQVFPEVTRLL---TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQY------------------ 679 (747)
12328 Q Consensus 626 ----~e~-~~ll~~giI~~Ll~LL---~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~L------------------ 679 (747)
12329 +.. ...+..++++.|..++ .+ .+..++..|+.+|..|+.........+
12330 T Consensus 495 ~~~~~~~~~~~~~~~~l~~L~~ll~~~~d------~~~~vR~~a~~~l~~la~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 568 (1454)
12331 T 5KC2_B 495 VRKLNQLNENIFVDYLLPRLKRLLISNRQ------NTNYLRIVFANCLSDLAIIINRFQEFTFAQHCNDNSMDNNTEIME 568 (1454)
12332 T ss_pred hhcCHHHHHHHHHcCcHHHHHHHHcCCCC------CcHHHHHHHHHHHHHHhcCCCCcceEEhhHHhhhHHHHHHHHHHH
12333 Confidence 111 2234456778888888 65 367888999999998875422111111
12334
12335
12336 Q NP_000290.2 680 ----FSSSMLNNIINLCRS----SASPKAAEAARLLLSDMWSS 714 (747)
12337 Q Consensus 680 ----ve~giL~~Ll~LL~s----~~d~eVr~aAL~aLsnL~~~ 714 (747)
12338 ...++++.|..++.. . ++.++..|+.+|..+...
12339 T Consensus 569 ~~~~~~~~~~~~l~~ll~~~l~d~-~~~vr~~a~~~l~~l~~~ 610 (1454)
12340 T 5KC2_B 569 SSTKYSAKLIQSVEDLTVSFLTDN-DTYVKMALLQNILPLCKF 610 (1454)
12341 T ss_pred HHHHHHcCHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHHhcC
12342 Confidence 123345556555554 4 677777787777777653
12343
12344
12345 No 312
12346 >2P8Q_A Importin beta-1 subunit, Snurportin-1; HEAT repeat, IBB-domain, Importin, Karyopherin; 2.35A {Homo sapiens} SCOP: a.118.1.1
12347 Probab=89.29 E-value=0.018 Score=60.92 Aligned_cols=154 Identities=10% Similarity=0.087 Sum_probs=87.1 Template_Neff=13.100
12348
12349 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12350 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12351 .++.+...+. +.++.++..++.+|..++..... . .... ....+++.+...+.+.++.++..++.++..++....
12352 T Consensus 367 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~---~-~~~~-~~~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 440 (876)
12353 T 2P8Q_A 367 VLPFIKEHIK-NPDWRYRDAAVMAFGCILEGPEP---S-QLKP-LVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLP 440 (876)
12354 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHTSSSSCH---H-HHHH-HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCG
12355 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhCCCh---h-hcHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHCc
12356 Confidence 3555666666 46677888888888888764221 0 0111 123456677777777778899999999999887521
12357
12358
12359 Q NP_000290.2 628 LH---RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK----------QYFS---SSMLNNIINL 691 (747)
12360 Q Consensus 628 ~~---~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~----------~Lve---~giL~~Ll~L 691 (747)
12361 .. ......+++.+...+.+ ++.++..++.++..++........ ..+. ..++..+...
12362 T Consensus 441 ~~~~~~~~~~~~~~~l~~~l~~-------~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (876)
12363 T 2P8Q_A 441 EAAINDVYLAPLLQCLIEGLSA-------EPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLET 513 (876)
12364 T ss_dssp GGTSSTTTHHHHHHHHHHHTTS-------CHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSCSCCTTGGGHHHHHHHHHHH
12365 T ss_pred HHhccchhHHHHHHHHHHHccC-------CHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcchhhccHhHHHHHHHHHHH
12366 Confidence 10 11112345555555543 356777888888887754221100 0000 1234444444
12367
12368
12369 Q NP_000290.2 692 CRS--SASPKAAEAARLLLSDMWSS 714 (747)
12370 Q Consensus 692 L~s--~~d~eVr~aAL~aLsnL~~~ 714 (747)
12371 +.. ..+..++..++.++..+...
12372 T Consensus 514 l~~~~~~~~~~r~~~~~~l~~l~~~ 538 (876)
12373 T 2P8Q_A 514 TDRPDGHQNNLRSSAYESLMEIVKN 538 (876)
12374 T ss_dssp TTCTTTTGGGHHHHHHHHHHHHHHS
12375 T ss_pred hcCCCCCcchHHHHHHHHHHHHHHh
12376 Confidence 431 11456777777777776643
12377
12378
12379 No 313
12380 >2QNA_A Importin subunit beta-1, Snurportin-1; Nuclear transport, import of spliceosomal; HET: SO4; 2.84A {Homo sapiens}
12381 Probab=89.10 E-value=0.019 Score=59.41 Aligned_cols=115 Identities=18% Similarity=0.151 Sum_probs=67.9 Template_Neff=13.200
12382
12383 Q NP_000290.2 245 LTIPKAVQYLSSQD--EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRS--PNQNVQQAAAGALRNLVFRSTT 320 (747)
12384 Q Consensus 245 ~iL~~Ll~lL~ssd--~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s--~d~eVr~~AL~aLs~La~~~~~ 320 (747)
12385 .+++.+...+.+.+ ..++..++.++..++...+..........+++.+...+.+ .++.++..++.++..++.....
12386 T Consensus 3 ~l~~~l~~~l~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~l~~~~~~ 82 (762)
12387 T 2QNA_A 3 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA 82 (762)
12388 T ss_pred chHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhCCHhhcHHHHHhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhcCCc
12389 Confidence 34555666666555 6788888888888775432211111112345666666653 3577888888888888754332
12390
12391
12392 Q NP_000290.2 321 NKL-ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
12393 Q Consensus 321 ~~~-~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
12394 ... ......+++.+...+. +.++.++..++.++..++..
12395 T Consensus 83 ~~~~~~~~~~i~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 122 (762)
12396 T 2QNA_A 83 NFDKESERHFIMQVVCEATQ-CPDTRVRVAALQNLVKIMSL 122 (762)
12397 T ss_pred cCCcchhHHhHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHh
12398 Confidence 111 0111234555555665 45677888888888887763
12399
12400
12401 No 314
12402 >1IBR_B RAN IMPORTIN BETA SUBUNIT; SMALL GTPASE NUCLEAR TRANSPORT; HET: GNP; 2.3A {Homo sapiens} SCOP: a.118.1.1
12403 Probab=89.10 E-value=0.019 Score=55.65 Aligned_cols=154 Identities=11% Similarity=0.066 Sum_probs=94.9 Template_Neff=12.900
12404
12405 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
12406 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
12407 .++.|...+. +.+ +.++..++.+|..+...... . .... ....+++.+...+.+.+ ..++..++.++..++
12408 T Consensus 129 ~~~~l~~~l~-~~~~~~~~~~~~l~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~l~ 202 (462)
12409 T 1IBR_B 129 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (462)
12410 T ss_dssp HHHHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHSCG---G-GTGG-GHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHT
12411 T ss_pred HHHHHHHHhh-CCCCchHHHHHHHHHHHHHhhcCCH---H-HHHH-HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
12412 Confidence 5666777776 344 67788888888888764221 0 0001 12456777788887766 889999999999887
12413
12414
12415 Q NP_000290.2 624 RHPLL-H--RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
12416 Q Consensus 624 ~~~e~-~--~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
12417 ..... . ......+...+..++.+ .++.++..++.+|..+...............+++.+...+.+. ++.+
12418 T Consensus 203 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v 275 (462)
12419 T 1IBR_B 203 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 275 (462)
12420 T ss_dssp TTTHHHHTSHHHHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCS-SHHH
12421 T ss_pred HHHHHhCCCHHHHHHHHHHHhHHhcC------CCHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHhcC-CHHH
12422 Confidence 65211 0 11222233334444433 3567888889999888764333222222222366667777665 7788
12423
12424
12425 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
12426 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
12427 +..++.++..++..
12428 T Consensus 276 ~~~a~~~l~~l~~~ 289 (462)
12429 T 1IBR_B 276 ALQGIEFWSNVCDE 289 (462)
12430 T ss_dssp HHHHHHHHHHHHHH
12431 T ss_pred HHHHHHHHHHHHHH
12432 Confidence 88898888888764
12433
12434
12435 No 315
12436 >1QGR_A IMPORTIN BETA SUBUNIT, IMPORTIN ALPHA-2; TRANSPORT RECEPTOR, NUCLEAR IMPORT, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.1
12437 Probab=88.89 E-value=0.021 Score=60.61 Aligned_cols=154 Identities=10% Similarity=0.084 Sum_probs=87.2 Template_Neff=13.000
12438
12439 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12440 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12441 .++.+...+. +.++.++..++.+|..++..... . .... .-..+++.+...+.+.++.++..++.++..++....
12442 T Consensus 367 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 440 (876)
12443 T 1QGR_A 367 VLPFIKEHIK-NPDWRYRDAAVMAFGCILEGPEP---S-QLKP-LVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLP 440 (876)
12444 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHcCCH---H-hcHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCC
12445 Confidence 3455556666 36677888888888888764221 0 0111 123456677777777788899999999999887521
12446
12447
12448 Q NP_000290.2 628 L--H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK----------QYFS---SSMLNNIINL 691 (747)
12449 Q Consensus 628 ~--~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~----------~Lve---~giL~~Ll~L 691 (747)
12450 . . ......+++.+...+.+ ++.++..++.++..++........ ..+. ..++..+...
12451 T Consensus 441 ~~~~~~~~~~~~~~~l~~~l~~-------~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 513 (876)
12452 T 1QGR_A 441 EAAINDVYLAPLLQCLIEGLSA-------EPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLET 513 (876)
12453 T ss_pred hhhcCCchHHHHHHHHHHHhcC-------CHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCcchhhhhhHHHHHHHHHHH
12454 Confidence 1 0 11112345555555543 356777888888887754221100 0000 1234444444
12455
12456
12457 Q NP_000290.2 692 CRS--SASPKAAEAARLLLSDMWSS 714 (747)
12458 Q Consensus 692 L~s--~~d~eVr~aAL~aLsnL~~~ 714 (747)
12459 +.. ..+..++..++.++..++..
12460 T Consensus 514 l~~~~~~~~~~r~~~~~~l~~l~~~ 538 (876)
12461 T 1QGR_A 514 TDRPDGHQNNLRSSAYESLMEIVKN 538 (876)
12462 T ss_pred hcCCCCCCHHHHHHHHHHHHHHHHc
12463 Confidence 431 11456777788877777643
12464
12465
12466 No 316
12467 >2DB0_A 253aa long hypothetical protein; HEAT repeats, helical structure, Structural; 2.2A {Pyrococcus horikoshii}
12468 Probab=88.88 E-value=0.021 Score=50.55 Aligned_cols=141 Identities=13% Similarity=0.132 Sum_probs=92.6 Template_Neff=12.700
12469
12470 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12471 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12472 .++.+...+. +.++.++..++.++..+...... . ....++.+...+.+.+..++..++.++..+.....
12473 T Consensus 108 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~~~~~a~~~l~~~~~~~~ 176 (253)
12474 T 2DB0_A 108 MIPVLFANYR-IGDEKTKINVSYALEEIAKANPM--------L--MASIVRDFMSMLSSKNREDKLTALNFIEAMGENSF 176 (253)
12475 T ss_dssp HHHHHHHHSC-CCSHHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHHHTSCSSHHHHHHHHHHHHTCCTTTH
12476 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhcH
12477 Confidence 4566677776 46778888888888887653211 1 13456667777777778888888888887654311
12478
12479
12480 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
12481 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
12482 . .....++.+...+.+ .++.++..++.+|..+....+ .....++.+...+.+. ++.++..++.+
12483 T Consensus 177 ~---~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~------~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 240 (253)
12484 T 2DB0_A 177 K---YVNPFLPRIINLLHD------GDEIVRASAVEALVHLATLND------KLRKVVIKRLEELNDT-SSLVNKTVKEG 240 (253)
12485 T ss_dssp H---HHGGGHHHHHGGGGC------SSHHHHHHHHHHHHHHHTSCH------HHHHHHHHHHHHCCCS-CHHHHHHHHHH
12486 T ss_pred H---hHHhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCH------HHHHHHHHHHHHhcCC-CHHHHHHHHHH
12487 Confidence 0 011345556666665 367888899999998875322 1123466666667665 67889999999
12488
12489
12490 Q NP_000290.2 708 LSDMWSSK 715 (747)
12491 Q Consensus 708 LsnL~~~~ 715 (747)
12492 |..+....
12493 T Consensus 241 l~~l~~~~ 248 (253)
12494 T 2DB0_A 241 ISRLLLLE 248 (253)
12495 T ss_dssp HHHHHHC-
12496 T ss_pred HHHHHHHh
12497 Confidence 98887644
12498
12499
12500 No 317
12501 >2DB0_B 253aa long hypothetical protein; HEAT repeats, helical structure, Structural; 2.2A {Pyrococcus horikoshii}
12502 Probab=88.88 E-value=0.021 Score=50.55 Aligned_cols=141 Identities=13% Similarity=0.132 Sum_probs=93.1 Template_Neff=12.700
12503
12504 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12505 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12506 .++.+...+. +.++.++..++.++..+...... . ....++.+...+.+.+..++..++.++..+.....
12507 T Consensus 108 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~~~~~a~~~l~~~~~~~~ 176 (253)
12508 T 2DB0_B 108 MIPVLFANYR-IGDEKTKINVSYALEEIAKANPM--------L--MASIVRDFMSMLSSKNREDKLTALNFIEAMGENSF 176 (253)
12509 T ss_dssp HHHHHTTTCC-CCSHHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHGGGGCSSHHHHHHHHHHHTTCCTTTH
12510 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhcH
12511 Confidence 4566677776 46778888888888887653211 1 13456667777777778888888888887654311
12512
12513
12514 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
12515 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
12516 . .....++.+...+.+ .++.++..++.+|..+....+ .....++.+...+.+. ++.++..++.+
12517 T Consensus 177 ~---~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~------~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 240 (253)
12518 T 2DB0_B 177 K---YVNPFLPRIINLLHD------GDEIVRASAVEALVHLATLND------KLRKVVIKRLEELNDT-SSLVNKTVKEG 240 (253)
12519 T ss_dssp H---HHGGGHHHHHGGGGC------SCHHHHHHHHHHHHHHHHHCH------HHHHHHHHHHHTCCCS-CHHHHHHHHHH
12520 T ss_pred H---hHHhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCH------HHHHHHHHHHHHhcCC-CHHHHHHHHHH
12521 Confidence 0 011345556666665 367888899999998875322 1123466666667665 67889999999
12522
12523
12524 Q NP_000290.2 708 LSDMWSSK 715 (747)
12525 Q Consensus 708 LsnL~~~~ 715 (747)
12526 |..+....
12527 T Consensus 241 l~~l~~~~ 248 (253)
12528 T 2DB0_B 241 ISRLLLLE 248 (253)
12529 T ss_dssp HHHHHTTC
12530 T ss_pred HHHHHHHh
12531 Confidence 98887644
12532
12533
12534 No 318
12535 >4K92_B CLIP-associating protein 1; HEAT-Repeat TOG domain, Regulator of; HET: MSE; 2.005A {Homo sapiens}
12536 Probab=88.82 E-value=0.022 Score=52.46 Aligned_cols=148 Identities=16% Similarity=0.091 Sum_probs=93.3 Template_Neff=11.700
12537
12538 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12539 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12540 +++.+...+. +.+..++..++.+|..++..... .... .-..+++.|+..+.+.+..++..++.+|..++....
12541 T Consensus 90 l~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~-----~~~~-~~~~~l~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 162 (273)
12542 T 4K92_B 90 LDGAFKLSAK-DLRSQVVREACITLGHLSSVLGN-----KFDH-GAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTH 162 (273)
12543 T ss_dssp THHHHHHHHT-CSCHHHHHHHHHHHHHHHHHHGG-----GGHH-HHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHCC
12544 T ss_pred HHHHHHHHHH-cHHHHHHHHHHHHHHHHHHHHHH-----HhHH-HHHHHHHHHHHHCccccHHHHHHHHHHHHHHHHhCC
12545 Confidence 4556666666 46778888899988888764221 0111 123466677777777777788888888888775421
12546
12547
12548 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
12549 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
12550 . ..+++.+...+.+ .++.++..++.+|..++...........-..+++.+...+.+. +..++..++.+
12551 T Consensus 163 ~-----~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~i~~~l~~~l~d~-~~~vr~~a~~~ 230 (273)
12552 T 4K92_B 163 I-----PRLIPVITSNCTS------KSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDA-DSEARIEARKC 230 (273)
12553 T ss_dssp C-----TTHHHHHHGGGGC------SCHHHHHHHHHHHHHHHHHSCHHHHTTCHHHHHHHHHHHHTCS-SHHHHHHHHHH
12554 T ss_pred C-----chHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHH
12555 Confidence 1 1234455555554 3577888888888888764322100011123566666777666 78899999999
12556
12557
12558 Q NP_000290.2 708 LSDMWSS 714 (747)
12559 Q Consensus 708 LsnL~~~ 714 (747)
12560 +..+...
12561 T Consensus 231 l~~l~~~ 237 (273)
12562 T 4K92_B 231 YWGFHSH 237 (273)
12563 T ss_dssp HHHHHHH
12564 T ss_pred HHHHHHH
12565 Confidence 8887754
12566
12567
12568 No 319
12569 >6MQ7_B CLIP-associating protein 1; microtubule binding protein, STRUCTURAL PROTEIN; 1.78A {Homo sapiens}
12570 Probab=88.82 E-value=0.022 Score=52.46 Aligned_cols=148 Identities=16% Similarity=0.091 Sum_probs=93.3 Template_Neff=11.700
12571
12572 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12573 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12574 +++.+...+. +.+..++..++.+|..++..... .... .-..+++.|+..+.+.+..++..++.+|..++....
12575 T Consensus 90 l~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~-----~~~~-~~~~~l~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 162 (273)
12576 T 6MQ7_B 90 LDGAFKLSAK-DLRSQVVREACITLGHLSSVLGN-----KFDH-GAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTH 162 (273)
12577 T ss_dssp THHHHHHHHT-CSSHHHHHHHHHHHHHHHHHHGG-----GGHH-HHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHCC
12578 T ss_pred HHHHHHHHHH-cHHHHHHHHHHHHHHHHHHHHHH-----HhHH-HHHHHHHHHHHHCccccHHHHHHHHHHHHHHHHhCC
12579 Confidence 4556666666 46778888899988888764221 0111 123466677777777777788888888888775421
12580
12581
12582 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
12583 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
12584 . ..+++.+...+.+ .++.++..++.+|..++...........-..+++.+...+.+. +..++..++.+
12585 T Consensus 163 ~-----~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~i~~~l~~~l~d~-~~~vr~~a~~~ 230 (273)
12586 T 6MQ7_B 163 I-----PRLIPVITSNCTS------KSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDA-DSEARIEARKC 230 (273)
12587 T ss_dssp C-----GGGHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHSCGGGTTTCHHHHHHHHHHHHTCS-SHHHHHHHHHH
12588 T ss_pred C-----chHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHH
12589 Confidence 1 1234455555554 3577888888888888764322100011123566666777666 78899999999
12590
12591
12592 Q NP_000290.2 708 LSDMWSS 714 (747)
12593 Q Consensus 708 LsnL~~~ 714 (747)
12594 +..+...
12595 T Consensus 231 l~~l~~~ 237 (273)
12596 T 6MQ7_B 231 YWGFHSH 237 (273)
12597 T ss_dssp HHHHHHH
12598 T ss_pred HHHHHHH
12599 Confidence 8887754
12600
12601
12602 No 320
12603 >1GCJ_B IMPORTIN-BETA; HEAT REPEAT MOTIF, NUCLEAR PORE-TARGETING; HET: MSE; 2.6A {Mus musculus} SCOP: a.118.1.1
12604 Probab=88.73 E-value=0.022 Score=55.37 Aligned_cols=154 Identities=12% Similarity=0.095 Sum_probs=94.5 Template_Neff=12.800
12605
12606 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
12607 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
12608 .++.|+..+. +.+ +.++..++.+|..+...... .........+++.+...+.+.+ +.++..++.++..+.
12609 T Consensus 135 ~~~~l~~~l~-~~~~~~~~~~~~l~~l~~l~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~~~ 208 (460)
12610 T 1GCJ_B 135 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP-----EQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 208 (460)
12611 T ss_dssp HHHHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHSCH-----HHHGGGHHHHHHHHHHHHCTTCSCHHHHHHHHHHHHHHT
12612 T ss_pred HHHHHHHHhh-CCCCcHHHHHHHHHHHHHHhhhCCH-----HHhHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
12613 Confidence 4566777776 344 67788888888888764221 0000112356777777787665 889999999999887
12614
12615
12616 Q NP_000290.2 624 RHPLL--H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
12617 Q Consensus 624 ~~~e~--~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
12618 ..... . ......+...+..++.+ .+..++..++.+|..+....+......+...+++.+..++.+. ++.+
12619 T Consensus 209 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v 281 (460)
12620 T 1GCJ_B 209 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 281 (460)
12621 T ss_dssp TTCHHHHTSHHHHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHHTTCGGGGGGTCCCCCHHHHHHHHTCS-SHHH
12622 T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHhhCC-CHHH
12623 Confidence 65111 1 11112233344444443 3567888889999888765333222222222366677777665 7788
12624
12625
12626 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
12627 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
12628 +..++.++..++..
12629 T Consensus 282 ~~~a~~~l~~l~~~ 295 (460)
12630 T 1GCJ_B 282 ALQGIEFWSNVCDE 295 (460)
12631 T ss_dssp HHHHHHHHHHHHHH
12632 T ss_pred HHHHHHHHHHHHHH
12633 Confidence 88899988888764
12634
12635
12636 No 321
12637 >1F59_B IMPORTIN BETA-1/FXFG NUCLEOPORIN; Protein-protein complex, TRANSPORT PROTEIN RECEPTOR; 2.8A {Homo sapiens} SCOP: a.118.1.1
12638 Probab=88.68 E-value=0.022 Score=54.84 Aligned_cols=154 Identities=11% Similarity=0.067 Sum_probs=94.0 Template_Neff=12.900
12639
12640 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
12641 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
12642 .++.+...+. +.+ +.++..++.+|..+...... . .... ....+++.+..++.+.+ ..++..++.++..++
12643 T Consensus 129 ~~~~l~~~l~-~~~~~~~~~~~~l~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~l~ 202 (442)
12644 T 1F59_B 129 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (442)
12645 T ss_dssp HHHHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHSCG---G-GGGG-GHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHHHS
12646 T ss_pred HHHHHHHHhh-CCCCcHHHHHHHHHHHHHHHhhCCH---H-HhHH-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
12647 Confidence 5666777776 344 67788888888887754221 0 0001 12456777777777766 889999999999987
12648
12649
12650 Q NP_000290.2 624 RHPLL--H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
12651 Q Consensus 624 ~~~e~--~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
12652 ..... . ......+...+..++.+ .+..++..++.+|..++...+..........+++.+..++.+. ++.+
12653 T Consensus 203 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~v 275 (442)
12654 T 1F59_B 203 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 275 (442)
12655 T ss_dssp TTCHHHHHSHHHHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHTGGGGGGTCCCCCHHHHHHHHHSS-CHHH
12656 T ss_pred HHHHHcCCCHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHhcCC-cHHH
12657 Confidence 65211 1 01112233333333333 3567888889999888765333322222222356666777655 7788
12658
12659
12660 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
12661 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
12662 +..++.++..++..
12663 T Consensus 276 ~~~a~~~l~~l~~~ 289 (442)
12664 T 1F59_B 276 ALQGIEFWSNVCDE 289 (442)
12665 T ss_dssp HHHHHHHHHHHHHH
12666 T ss_pred HHHHHHHHHHHhhH
12667 Confidence 88899988888764
12668
12669
12670 No 322
12671 >1UKL_A Importin beta-1 subunit/Sterol regulatory element; Transcription factor, Nuclear transport factor; HET: MSE; 3.0A {Mus musculus} SCOP: a.118.1.1
12672 Probab=88.63 E-value=0.022 Score=60.17 Aligned_cols=113 Identities=10% Similarity=0.112 Sum_probs=64.3 Template_Neff=13.100
12673
12674 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTN-KLE 324 (747)
12675 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~-~~~ 324 (747)
12676 +++.+...+.+.++.++..++.++..+...............+++.+...+.+.+..++..++.++..++...... ...
12677 T Consensus 367 ~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~ 446 (876)
12678 T 1UKL_A 367 VLPFIKEHIKNPDWRYRDAAVMAFGSILEGPEPNQLKPLVIQAMPTLIELMKDPSVVVRDTTAWTVGRICELLPEAAIND 446 (876)
12679 T ss_dssp HHHHHHHHSSCSSHHHHHHHHHHHHTTSSSSCHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHHSCT
12680 T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHChHHhcCc
12681 Confidence 3344444455566778888888888876543211111112345566666666667788888888888887543321 001
12682
12683
12684 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
12685 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
12686 .....+++.+...+. . ++.++..++.++..++..
12687 T Consensus 447 ~~~~~~~~~l~~~l~-~-~~~~~~~~~~~l~~l~~~ 480 (876)
12688 T 1UKL_A 447 VYLAPLLQCLIEGLS-A-EPRVASNVCWAFSSLAEA 480 (876)
12689 T ss_dssp TTHHHHHHHHHHHTT-S-CHHHHHHHHHHHHHHHHH
12690 T ss_pred cchHHHHHHHHHHhc-C-ChhHHHHHHHHHHHHHHH
12691 Confidence 111234555555554 3 456677777777776653
12692
12693
12694 No 323
12695 >1U6G_C Cullin homolog 1, RING-box protein; cullin repeat, heat repeat, ring; 3.1A {Homo sapiens} SCOP: a.118.1.2
12696 Probab=88.22 E-value=0.025 Score=62.86 Aligned_cols=146 Identities=12% Similarity=0.093 Sum_probs=89.7 Template_Neff=12.800
12697
12698 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12699 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12700 .++.++..+. . ++.++..++.++..+....+. . .... .-..+++.+...+.+.++.++..++.+|+.+.....
12701 T Consensus 891 ~~~~l~~~l~-~-~~~~r~~~~~~l~~i~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 963 (1230)
12702 T 1U6G_C 891 YLPFVLQEIT-S-QPKRQYLLLHSLKEIISSASV---V-GLKP-YVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDP 963 (1230)
12703 T ss_dssp HHHHHHHHHH-S-CGGGHHHHHHHHHHHHHSSCS---T-TTHH-HHHHHHHHHTTCCCCSSTTHHHHHHHHHHHHHHSSG
12704 T ss_pred HHHHHHHHHc-c-CchHHHHHHHHHHHHHhcccc---c-ccHH-hHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHccCH
12705 Confidence 4555555554 2 455666777777777653221 0 0001 113466677777777788899999999988876421
12706
12707
12708 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
12709 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
12710 ...++.+...+.+ .+..++..++.+|..+....+........ ..++.++..+.+. ++.++..++.+
12711 T Consensus 964 ------~~~~~~l~~~l~~------~~~~~r~~~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~l~d~-~~~vr~~a~~~ 1029 (1230)
12712 T 1U6G_C 964 ------ETLLPRLKGYLIS------GSSYARSSVVTAVKFTISDHPQPIDPLLK-NCIGDFLKTLEDP-DLNVRRVALVT 1029 (1230)
12713 T ss_dssp ------GGTHHHHTTTSSS------SCHHHHHHHHHHTGGGCCSSCCTHHHHHH-HHSTTTHHHHSSS-STHHHHHHHHH
12714 T ss_pred ------HhHHHHHHHHhhC------CCHHHHHHHHHHHHHHHcCCCCCccHHHH-HHHHHHHHHcCCC-CHHHHHHHHHH
12715 Confidence 1234555666654 25667788888888877643221111222 4567777777766 77888888888
12716
12717
12718 Q NP_000290.2 708 LSDMWSS 714 (747)
12719 Q Consensus 708 LsnL~~~ 714 (747)
12720 +..+...
12721 T Consensus 1030 l~~l~~~ 1036 (1230)
12722 T 1U6G_C 1030 FNSAAHN 1036 (1230)
12723 T ss_dssp HHHHHHH
12724 T ss_pred HHHHHhc
12725 Confidence 8888754
12726
12727
12728 No 324
12729 >4MFU_A Beta-catenin-like protein 1; ARM repeats, GENE REGULATION; 2.744A {Homo sapiens}
12730 Probab=88.09 E-value=0.031 Score=59.08 Aligned_cols=135 Identities=14% Similarity=0.062 Sum_probs=91.1 Template_Neff=8.700
12731
12732 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDE---------SAKQQVYQLGGICKLVDLLRS------PNQNVQQAAAGA 310 (747)
12733 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~---------~~~~~li~~~IL~~Ll~lL~s------~d~eVr~~AL~a 310 (747)
12734 +++.|+.++.+.+..+...++.+|..++.... .....+...++++.++..+.. .+......++.+
12735 T Consensus 69 ~i~~Lv~LL~~~n~~i~~~a~~~L~~Lt~~~~~~~~~~~~~~~~~~l~~~g~l~~Lv~~L~~~~e~~~~d~~~~~~al~~ 148 (490)
12736 T 4MFU_A 69 AVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAI 148 (490)
12737 T ss_dssp HHHHHHHHTSCSSHHHHHHHHHHHHHHHHGGGSSCCCHHHHHHHHHHHHTTHHHHHHHHHHHCCTTCHHHHHHHHHHHHH
12738 T ss_pred hHHHHHHHhCCCCHHHHHHHHHHHHHHcCcccccCChhhHHHHHHHHHhCCHHHHHHHHHHhccccccchHHHHHHHHHH
12739 Confidence 45566677776667778888888888876432 122333445677777777764 456677888899
12740
12741
12742 Q NP_000290.2 311 LRNLVFRSTTNKLETRRQNGIREAVSLLRRTG--NAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVII 381 (747)
12743 Q Consensus 311 Ls~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~--d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
12744 |.+++...+.....+...++++.|+..+. .. ...++..+..+|..++.. ......+.. ++++.|+.+|..
12745 T Consensus 149 L~nL~~~~~~~~~~i~~~~~l~~Ll~~L~-~~~~~~~~k~~a~~~L~~L~~~~~~~~~~l~~~g~i~~Ll~lL~~ 222 (490)
12746 T 4MFU_A 149 VENMAEFRPEMCTEGAQQGLLQWLLKRLK-AKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSV 222 (490)
12747 T ss_dssp HHHHHHHSTTHHHHHCCCCCHHHHHHHHH-CCSCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHT
12748 T ss_pred HHHHhccCHHHHHHHHHCCHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCchHHHHHHHHHh
12749 Confidence 99888654333333444567888888886 33 467788899999999875 333444444 788888888863
12750
12751
12752 No 325
12753 >6CRI_I Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
12754 Probab=87.58 E-value=0.03 Score=55.48 Aligned_cols=141 Identities=14% Similarity=0.110 Sum_probs=94.1 Template_Neff=13.200
12755
12756 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12757 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12758 .++.++..+. +.+..++..++.++..+....+. . ...+++.+...+.+.++.++..++.++..+.....
12759 T Consensus 37 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 105 (570)
12760 T 6CRI_I 37 LFPDVVNCMQ-TDNLELKKLVYLYLMNYAKSQPD--------M--AIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKI 105 (570)
12761 T ss_dssp GHHHHHHTCS-CSCHHHHHHHHHHHHHTTTTSTT--------G--GGTTHHHHHHHTSSSCHHHHHHHHHHHHHCCCTTT
12762 T ss_pred hHHHHHHhcc-CCCHHHHHHHHHHHHHHHccCHh--------H--HHHHHHHHHHHcCCCCHHHHHHHHHHHccCChhHH
12763 Confidence 4555666676 46677888888888887754221 1 12345666777777788889999998888764311
12764
12765
12766 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
12767 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
12768 ...+++.+...+.+ .++.++..++.+|..+....+... .....++.+...+.+. ++.++..++.+
12769 T Consensus 106 -----~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~~~~---~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 170 (570)
12770 T 6CRI_I 106 -----TEYLCEPLRKCLKD------EDPYVRKTAAVCVAKLHDINAQLV---EDQGFLDTLKDLISDS-NPMVVANAVAA 170 (570)
12771 T ss_dssp -----TTTSHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHCHHHH---HHHTHHHHHHHHHTSS-SHHHHHHHHHH
12772 T ss_pred -----HHHHHHHHHHhcCC------CCHHHHHHHHHHHHHHHHhChhhh---hccchHHHHHHHhcCC-CHHHHHHHHHH
12773 Confidence 12345556666665 367888999999998876433221 1134567777777766 77888889998
12774
12775
12776 Q NP_000290.2 708 LSDMWSS 714 (747)
12777 Q Consensus 708 LsnL~~~ 714 (747)
12778 |..+...
12779 T Consensus 171 l~~~~~~ 177 (570)
12780 T 6CRI_I 171 LSEIAES 177 (570)
12781 T ss_dssp HHHHHHH
12782 T ss_pred HHHHHhh
12783 Confidence 8888765
12784
12785
12786 No 326
12787 >3QML_D 78 kDa glucose-regulated protein homolog; Armadillo like repeats, CHAPERONE-PROTEIN TRANSPORT; HET: PO4; 2.31A {Saccharomyces cerevisiae}
12788 Probab=87.49 E-value=0.038 Score=55.35 Aligned_cols=165 Identities=6% Similarity=-0.069 Sum_probs=100.7 Template_Neff=7.900
12789
12790 Q NP_000290.2 534 ETNPKGSGWLYHSDAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEK--GLPQIA---RLLQ-- 605 (747)
12791 Q Consensus 534 ~~ni~~~~~lve~G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~g--iI~~Ll---~LL~-- 605 (747)
12792 .+++.....+++.| ++.|+.++... ....++..|+++|+..+.+++. ....+.+.+ +++.|+ ..|.
12793 T Consensus 56 ~hdid~a~~~~~~g-~~~L~~~l~~~~~~~~ir~~Aa~iigsa~qNNP~-----aq~~~~~~~~~~l~~Ll~~~~~L~~~ 129 (315)
12794 T 3QML_D 56 AHDYKHGYKIITHE-FALLANLSLNENLPLTLRELSTRVITSCLRNNPP-----VVEFINESFPNFKSKIMAALSNLNDS 129 (315)
12795 T ss_dssp HTSHHHHHHHHHHH-HHHHHHHHHCTTSCHHHHHHHHHHHHHHHTTCTT-----HHHHHHHHCTTHHHHHHHHHHHHHCC
12796 T ss_pred HccHHHHHHHHHch-HHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhCHH-----HHHHHHHHCccHHHHHHHHHHhhccC
12797 Confidence 34556666677888 88888888721 5678999999999999988764 344445555 677777 4443
12798
12799
12800 Q NP_000290.2 606 --SGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA------ 676 (747)
12801 Q Consensus 606 --s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~------ 676 (747)
12802 ..++.++..++.+|+.|+.+... ..+ ++..|..++... ..+..++..++.++..+........
12803 T Consensus 130 ~~~~~~~v~~k~L~aLS~Lir~~~~~~~F----G~~~L~~~~~~~----~~~~~~~~K~l~ll~dl~~~~~~~~~~~~~~ 201 (315)
12804 T 3QML_D 130 NHRSSNILIKRYLSILNELPVTSEDLPIY----STVVLQNVYERN----NKDKQLQIKVLELISKILKADMYENDDTNLI 201 (315)
12805 T ss_dssp ---CTHHHHHHHHHHHHHSCCCGGGGGGS----CHHHHHHHHHTT----TTCHHHHHHHHHHHHHHHTTTC------CHH
12806 T ss_pred CCcCCHHHHHHHHHHHHhhcCCCccHhhh----cHHHHHHHHHhC----CCCHHHHHHHHHHHHHHHHhccccCCCcchH
12807 Confidence 35677888999999999987322 222 456666666431 0135677788888888775432211
12808
12809
12810 Q NP_000290.2 677 --------KQYFSSSMLNNIINLCRSS-ASPKAAEAARLLLSDMW 712 (747)
12811 Q Consensus 677 --------~~Lve~giL~~Ll~LL~s~-~d~eVr~aAL~aLsnL~ 712 (747)
12812 ......+.+..+...+... .+....+.++.+|..|.
12813 T Consensus 202 ~~~~~~~~~~~~~~~~c~~l~~~L~~~~~d~~~~ek~l~~L~~L~ 246 (315)
12814 T 3QML_D 202 LFKRNAENWSSNLQEWANEFQEMVQNKSIDELHTRTFFDTLYNLK 246 (315)
12815 T ss_dssp HHHHHHHTTCSCCHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHH
12816 T ss_pred HhHhhccccchhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
12817 Confidence 1111133445555555421 13455566666666554
12818
12819
12820 No 327
12821 >5IFE_C Splicing factor 3B subunit 5; pre-mRNA splicing, U2 snRNP, essential; 3.1A {Homo sapiens}
12822 Probab=87.43 E-value=0.036 Score=65.15 Aligned_cols=154 Identities=8% Similarity=0.029 Sum_probs=84.9 Template_Neff=9.800
12823
12824 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
12825 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
12826 .++..++..+. +.+..++..++.+|..++..... .. .... ....+++.+...+... ...+..++.+|..++...
12827 T Consensus 848 ~il~~l~~~l~-d~~~~~r~~a~~~L~~l~~~~~~--~~-~~~~-~~~~li~~ll~~l~~~-~~~r~~al~~L~~l~~~~ 921 (1304)
12828 T 5IFE_C 848 EIISRIVDDLK-DEAEQYRKMVMETIEKIMGNLGA--AD-IDHK-LEEQLIDGILYAFQEQ-TTEDSVMLNGFGTVVNAL 921 (1304)
12829 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhcCh--hh-hHHH-HHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHhC
12830 Confidence 34556666666 35556777788888777653211 00 0001 1123444455444432 356677788887777652
12831
12832
12833 Q NP_000290.2 627 L-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
12834 Q Consensus 627 e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
12835 . . ..++ ..++..+...+.+ .+..++..++.+|..++..............++..|...+.+. ++.++..+
12836 T Consensus 922 ~~~~~~~l-~~l~~~L~~~L~~------~~~~vR~~A~~~L~~l~~~~~~~~~~~~~~~l~~~L~~~L~d~-~~~vr~~a 993 (1304)
12837 T 5IFE_C 922 GKRVKPYL-PQICGTVLWRLNN------KSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEE-YPEVLGSI 993 (1304)
12838 T ss_pred HHHhHHHH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhccCcCHHHHHHHHHHHHHHHhCCC-CHHHHHHH
12839 Confidence 1 1 1111 2355556666655 3678888999999998764222111111123456666666654 56777778
12840
12841
12842 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
12843 Q Consensus 705 L~aLsnL~~~ 714 (747)
12844 +.+|..++..
12845 T Consensus 994 l~aL~~l~~~ 1003 (1304)
12846 T 5IFE_C 994 LGALKAIVNV 1003 (1304)
12847 T ss_pred HHHHHHHHHh
12848 Confidence 7777776644
12849
12850
12851 No 328
12852 >6AHD_1 Pre-mRNA-processing-splicing factor 8, Thioredoxin-like protein; Spliceosome, SPLICING; HET: IHP, GTP; 3.8A {Homo sapiens}
12853 Probab=87.43 E-value=0.036 Score=65.15 Aligned_cols=154 Identities=8% Similarity=0.029 Sum_probs=84.9 Template_Neff=9.800
12854
12855 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
12856 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
12857 .++..++..+. +.+..++..++.+|..++..... .. .... ....+++.+...+... ...+..++.+|..++...
12858 T Consensus 848 ~il~~l~~~l~-d~~~~~r~~a~~~L~~l~~~~~~--~~-~~~~-~~~~li~~ll~~l~~~-~~~r~~al~~L~~l~~~~ 921 (1304)
12859 T 6AHD_1 848 EIISRIVDDLK-DEAEQYRKMVMETIEKIMGNLGA--AD-IDHK-LEEQLIDGILYAFQEQ-TTEDSVMLNGFGTVVNAL 921 (1304)
12860 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhcCh--hh-hHHH-HHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHhC
12861 Confidence 34556666666 35556777788888777653211 00 0001 1123444455444432 356677788887777652
12862
12863
12864 Q NP_000290.2 627 L-L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
12865 Q Consensus 627 e-~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
12866 . . ..++ ..++..+...+.+ .+..++..++.+|..++..............++..|...+.+. ++.++..+
12867 T Consensus 922 ~~~~~~~l-~~l~~~L~~~L~~------~~~~vR~~A~~~L~~l~~~~~~~~~~~~~~~l~~~L~~~L~d~-~~~vr~~a 993 (1304)
12868 T 6AHD_1 922 GKRVKPYL-PQICGTVLWRLNN------KSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEE-YPEVLGSI 993 (1304)
12869 T ss_pred HHHhHHHH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhccCcCHHHHHHHHHHHHHHHhCCC-CHHHHHHH
12870 Confidence 1 1 1111 2355556666655 3678888999999998764222111111123456666666654 56777778
12871
12872
12873 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
12874 Q Consensus 705 L~aLsnL~~~ 714 (747)
12875 +.+|..++..
12876 T Consensus 994 l~aL~~l~~~ 1003 (1304)
12877 T 6AHD_1 994 LGALKAIVNV 1003 (1304)
12878 T ss_pred HHHHHHHHHh
12879 Confidence 7777776644
12880
12881
12882 No 329
12883 >5MU7_A Coatomer subunit beta, Coatomer subunit; coatomer, COPI, beta COP, delta; 2.57A {Chaetomium thermophilum var. thermophilum DSM 1495}
12884 Probab=87.43 E-value=0.031 Score=52.40 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=92.9 Template_Neff=12.800
12885
12886 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL 628 (747)
12887 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~ 628 (747)
12888 ++.++..+. +.++.++..++.+|..+....+. .....++.+...+.+.+..++..++.+|..+......
12889 T Consensus 190 ~~~l~~~l~-~~~~~~~~~a~~~l~~~~~~~~~----------~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~~ 258 (373)
12890 T 5MU7_A 190 LGTVFEGIP-NAEELLQLVEIEFIRKDALHNPQ----------NKPRYLRLIFDLLEANTSTVVYEAASSLTALTNNPVA 258 (373)
12891 T ss_dssp HHHTGGGGG-GSCHHHHHHHHHHHHHHHHHCGG----------GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHCCCHHH
12892 T ss_pred HHHHHhcCC-ChhHHHHHHHHHHHHHHhccCcc----------cHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCHHH
12893 Confidence 455566666 35667777888888887653221 1234566777777777788888888888887743211
12894
12895
12896 Q NP_000290.2 629 HRVMGNQVFPEVTRLLT-SHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
12897 Q Consensus 629 ~~ll~~giI~~Ll~LL~-s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
12898 . ..+++.+...+. + .++.++..++.+|..+....+.. + ...++.+...+.+. ++.++..++.+
12899 T Consensus 259 ---~-~~~~~~l~~~l~~~------~~~~vr~~a~~~l~~l~~~~~~~----~-~~~~~~l~~~l~~~-~~~vr~~a~~~ 322 (373)
12900 T 5MU7_A 259 ---V-KAAAGKFIELAIKE------ADNNVKLIVLDRVDQLRQKNEGI----L-DDLIMEILRVLSSP-DIDVRRKALEI 322 (373)
12901 T ss_dssp ---H-HHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHTTTT----T-GGGHHHHHHGGGSS-CHHHHHHHHHH
12902 T ss_pred ---H-HHHHHHHHHHHhhC------CChhHHHHHHHHHHHHHHhCHHH----H-HHHHHHHHHHhcCC-CHHHHHHHHHH
12903 Confidence 1 134556666665 4 36788889999999887643211 1 13566677777665 77889999999
12904
12905
12906 Q NP_000290.2 708 LSDMWSSKE 716 (747)
12907 Q Consensus 708 LsnL~~~~~ 716 (747)
12908 |..+.....
12909 T Consensus 323 l~~~~~~~~ 331 (373)
12910 T 5MU7_A 323 ALEMVSSKN 331 (373)
12911 T ss_dssp HHTTCCTTT
12912 T ss_pred HHHHhcCCC
12913 Confidence 998876544
12914
12915
12916 No 330
12917 >5VE8_B Kap123, Histone H3; Bidding yeast karyopherin, 23 HEAT; HET: MSE; 2.7A {Kluyveromyces lactis}
12918 Probab=87.41 E-value=0.031 Score=61.14 Aligned_cols=154 Identities=11% Similarity=0.104 Sum_probs=81.3 Template_Neff=12.900
12919
12920 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH-P 626 (747)
12921 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
12922 ++.+...+. ..++.++..++.++..++..... ... ....+++.++..+ .+.++.++..++.++..++.. +
12923 T Consensus 868 ~~~l~~~~~-~~~~~~r~~~~~~l~~l~~~~~~------~~~-~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~ 939 (1116)
12924 T 5VE8_B 868 KPVILQLCQ-SKSKNKRSFAVGALSEIALGMRD------ENP-FIQELLEALIISLTNDKSLEVRCNASYGVGLLIEYSS 939 (1116)
12925 T ss_dssp HHHHHHHTT-CSCHHHHHHHHHHHHHHHHHHGG------GCT-THHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCC
12926 T ss_pred HHHHHHHcC-CCCHHHHHHHHHHHHHHHHhCCC------Cch-hHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhCC
12927 Confidence 333444443 24556677777777777653221 111 1134555555553 345678889999999888865 2
12928
12929
12930 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGN----------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSS 695 (747)
12931 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~----------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~ 695 (747)
12932 .. ...+ ..+++.|...+...... ......++..++.+|+.+....+... ....+++.++..+...
12933 T Consensus 940 ~~~~~~~-~~il~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~---~~~~~l~~~~~~l~~~ 1015 (1116)
12934 T 5VE8_B 940 FDVSAIY-SPVLKSLYEILSVADEKNLATEDDEATKEIVDRTFSNVCGCVARMILKHQNLV---PLEHTIPALLSHLPFN 1015 (1116)
12935 T ss_dssp SCCHHHH-HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHHHHCGGGS---CHHHHHHHHHTTCSCS
12936 T ss_pred cchhhhH-HHHHHHHHHHhcchhHhccCCCCchhhHHHHHHHHHHHHHHHHHHHHHCcccC---CHHHHHHHHHhcCCCC
12937 Confidence 11 1111 23555566555431000 00245667788888888876533211 1123455555555322
12938
12939
12940 Q NP_000290.2 696 ASPKAAEAARLLLSDMWSS 714 (747)
12941 Q Consensus 696 ~d~eVr~aAL~aLsnL~~~ 714 (747)
12942 .+...+..++.+|..+...
12943 T Consensus 1016 ~~~~~~~~~~~~l~~l~~~ 1034 (1116)
12944 T 5VE8_B 1016 TAFEEYDPIFKLFLKLFQE 1034 (1116)
12945 T ss_dssp SCGGGHHHHHHHHHHHHHT
12946 T ss_pred CchhhhHHHHHHHHHHHHh
12947 Confidence 1455666677777766543
12948
12949
12950 No 331
12951 >2IX8_A ELONGATION FACTOR 3A; NUCLEOTIDE-BINDING, PROTEIN BIOSYNTHESIS, PHOSPHORYLATION, ELONGATION; 6.0A {SACCHAROMYCES CEREVISIAE}
12952 Probab=87.28 E-value=0.034 Score=61.28 Aligned_cols=150 Identities=9% Similarity=0.007 Sum_probs=99.4 Template_Neff=11.800
12953
12954 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
12955 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
12956 .+++.|...+. +.++.++..++.+|..+...... .... ....+++.|...+.+.++.++..|+.+|..++...
12957 T Consensus 48 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~ 120 (976)
12958 T 2IX8_A 48 HFFGELAKGIK-DKKTAANAMQAVAHIANQSNLSP-----SVEP-YIVQLVPAICTNAGNKDKEIQSVASETLISIVNAV 120 (976)
12959 T ss_dssp HHHHHHHHHHT-STTTHHHHHHHHHHHSCTTTCCT-----TTHH-HHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHS
12960 T ss_pred HHHHHHHHHcc-CHHHHHHHHHHHHHHHHHhccCc-----ccHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhc
12961 Confidence 45677777777 46677888888888888753221 0111 12356777777888888889999999999887652
12962
12963
12964 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLL-TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
12965 Q Consensus 627 e~~~ll~~giI~~Ll~LL-~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
12966 .... ...+++.|...+ .+ .++.++..++.+|..++...+....... ..+++.+..++.+. +..++..++
12967 T Consensus 121 ~~~~--~~~~l~~l~~~l~~~------~~~~vr~~al~~L~~l~~~~~~~~~~~~-~~~~~~l~~~l~d~-~~~vr~~a~ 190 (976)
12968 T 2IX8_A 121 NPVA--IKALLPHLTNAIVET------NKWQEKIAILAAFSAMVDAAKDQVALRM-PELIPVLSETMWDT-KKEVKAAAT 190 (976)
12969 T ss_dssp CGGG--HHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHSHHHHHHHH-HHHHHHHHHHTTCS-CHHHHHHHH
12970 T ss_pred CHHH--HHHHHHHHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHHhHHhhc-hhHHHHHHHhhcCC-CHHHHHHHH
12971 Confidence 1111 123556666666 33 3567888899999988864322211111 24677777777766 788899999
12972
12973
12974 Q NP_000290.2 706 LLLSDMWS 713 (747)
12975 Q Consensus 706 ~aLsnL~~ 713 (747)
12976 .+|..+..
12977 T Consensus 191 ~~l~~l~~ 198 (976)
12978 T 2IX8_A 191 AAMTKATE 198 (976)
12979 T ss_dssp HHHHHHST
12980 T ss_pred HHHHHHHH
12981 Confidence 99888876
12982
12983
12984 No 332
12985 >3WOY_A CLIP-associating protein 2; HEAT Repeat, Microtubule binding, Tubulin; 2.1A {Homo sapiens}
12986 Probab=87.26 E-value=0.034 Score=50.12 Aligned_cols=147 Identities=14% Similarity=0.116 Sum_probs=92.3 Template_Neff=11.900
12987
12988 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
12989 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
12990 .++.+...+. +.+..++..++.++..++..... ....+ -..+++.+...+.+....++..+..++..++....
12991 T Consensus 78 l~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~-----~~~~~-~~~l~~~l~~~l~~~~~~vr~~a~~~l~~i~~~~~ 150 (251)
12992 T 3WOY_A 78 LDGALKLSAK-DLRSQVVREACITVAHLSTVLGN-----KFDHG-AEAIVPTLFNLVPNSAKVMATSGCAAIRFIIRHTH 150 (251)
12993 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHCc-----ccHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCC
12994 Confidence 4555666666 46678888899999888764321 01111 13456667777766677788888888888875421
12995
12996
12997 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL-AKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
12998 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~-~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
12999 . ..+++.+...+.+ .++.++..++.++..++...... .... -..+++.+...+.+. +..++..++.
13000 T Consensus 151 ~-----~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~-~~~i~~~l~~~l~d~-~~~vr~~a~~ 217 (251)
13001 T 3WOY_A 151 V-----PRLIPLITSNCTS------KSVPVRRRSFEFLDLLLQEWQTHSLERH-AAVLVETIKKGIHDA-DAEARVEARK 217 (251)
13002 T ss_pred H-----hhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHCHHhhHHh-HHHHHHHHHHHhcCC-CHHHHHHHHH
13003 Confidence 1 1244455555554 35677888888888887542211 1111 123566677777766 7889999999
13004
13005
13006 Q NP_000290.2 707 LLSDMWSS 714 (747)
13007 Q Consensus 707 aLsnL~~~ 714 (747)
13008 ++..+...
13009 T Consensus 218 ~l~~l~~~ 225 (251)
13010 T 3WOY_A 218 TYMGLRNH 225 (251)
13011 T ss_pred HHHHHHHH
13012 Confidence 88887754
13013
13014
13015 No 333
13016 >5DN7_A Protein FAM179B; TOG domain, STRUCTURAL PROTEIN; 2.2A {Mus musculus}
13017 Probab=87.22 E-value=0.035 Score=51.97 Aligned_cols=146 Identities=10% Similarity=0.046 Sum_probs=94.2 Template_Neff=11.400
13018
13019 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13020 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13021 .++.+...+. +.++.++..++.+|..++..... .... .-..+++.|...+.+.+..++..++.+|..+.....
13022 T Consensus 67 l~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-----~~~~-~~~~l~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 139 (293)
13023 T 5DN7_A 67 FISLLYNLLD-DSNFKVVHGTLQVLHLLVIRLGE-----QVQQ-FLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKEVG 139 (293)
13024 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHHGG-----GGGG-GHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHC
13025 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH-----HHHH-HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHC
13026 Confidence 4555666666 46778888889888888764221 0111 113467777777777778888889998888875311
13027
13028
13029 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
13030 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
13031 . ..+++.+...+.+ .++.++..++.++..+........ ..-..+++.+...+.+. +..++..++.+
13032 T Consensus 140 ~-----~~~~~~l~~~l~~------~~~~vr~~al~~l~~l~~~~~~~~--~~~~~~~~~l~~~l~d~-~~~vr~~a~~~ 205 (293)
13033 T 5DN7_A 140 P-----QRVLSLLLENLKH------KHSRVREEVVNICICSLLTYPSED--FDLPKLSFDLAPALVDS-KRRVRQAALEA 205 (293)
13034 T ss_dssp H-----HHHHHHHHGGGGC------SCHHHHHHHHHHHHHHHHHSCGGG--SCHHHHHHHHGGGGGCS-SHHHHHHHHHH
13035 T ss_pred H-----HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhCCccc--CCHHHHHHHHHHHhcCC-CHHHHHHHHHH
13036 Confidence 1 1244555555554 367788888888888876432211 11124566677777766 78888889888
13037
13038
13039 Q NP_000290.2 708 LSDMWSS 714 (747)
13040 Q Consensus 708 LsnL~~~ 714 (747)
13041 +..+...
13042 T Consensus 206 l~~l~~~ 212 (293)
13043 T 5DN7_A 206 FAVLASS 212 (293)
13044 T ss_dssp HHHHHHH
13045 T ss_pred HHHHHHH
13046 Confidence 8887653
13047
13048
13049 No 334
13050 >4HM9_A Beta-catenin-like protein 1; all alpha-helical, armadillo repeats, PROTEIN; 3.1001A {Homo sapiens}
13051 Probab=87.21 E-value=0.04 Score=59.57 Aligned_cols=135 Identities=14% Similarity=0.062 Sum_probs=91.1 Template_Neff=8.100
13052
13053 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDE---------SAKQQVYQLGGICKLVDLLRS------PNQNVQQAAAGA 310 (747)
13054 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~---------~~~~~li~~~IL~~Ll~lL~s------~d~eVr~~AL~a 310 (747)
13055 .++.|+.++.+.+..+...++.+|..+..... .....+...++++.|+..+.. .+...+..++.+
13056 T Consensus 147 ~i~~Lv~LL~~~n~di~~~a~~~L~~Lt~~~~~~~~~~~~~~l~~~l~e~g~l~~Lv~~L~~l~e~~~~d~~~~~~al~i 226 (568)
13057 T 4HM9_A 147 AVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDALVDGQVVALLVQNLERLDESVKEEADGVHNTLAI 226 (568)
13058 T ss_dssp HHHHHHHGGGCSSHHHHHHHHHHHHHHTCHHHHTTCHHHHHHHHHHHHHTTHHHHHHHHHTTCCTTSHHHHHHHHHHHHH
13059 T ss_pred hHHHHHHHhCCCCHHHHHHHHHHHHHHhCCccccCChhhHHHHHHHHHhCCHHHHHHHHHhcccccccchHHHHHHHHHH
13060 Confidence 45566677776667788888888888875432 112333445677777777765 455677888999
13061
13062
13063 Q NP_000290.2 311 LRNLVFRSTTNKLETRRQNGIREAVSLLRRTG--NAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVII 381 (747)
13064 Q Consensus 311 Ls~La~~~~~~~~~ll~~~IL~~Ll~lL~ss~--d~eVr~~AL~aLsnLas~-~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
13065 |.+++...+.....+...+++..|+.++. .. ....+..+..+|..|+.. ......+.. ++++.|+.+|..
13066 T Consensus 227 L~nL~~~~~~~~~~i~~~g~l~~Ll~lL~-~~~~~~~~k~~AaeiL~~L~~~~~~~r~~l~~~g~I~~LL~lL~~ 300 (568)
13067 T 4HM9_A 227 VENMAEFRPEMCTEGAQQGLLQWLLKRLK-AKMPFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSV 300 (568)
13068 T ss_dssp HHHHHHHCGGGHHHHCCCCCHHHHHHHHH-SSCCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHGG
13069 T ss_pred HHHHhccCHHHHHHHHHCCHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHhCchHHHHHHHHHh
13070 Confidence 99888653332223344567888888886 33 456788899999999875 344444444 888989988864
13071
13072
13073 No 335
13074 >6S47_Bi 60S ribosomal protein L2-A, 60S; New1, ABCF, Ribosomal Protein, Recycling; HET: ATP; 3.28A {Saccharomyces cerevisiae}
13075 Probab=87.16 E-value=0.035 Score=61.24 Aligned_cols=155 Identities=12% Similarity=0.055 Sum_probs=101.1 Template_Neff=11.700
13076
13077 Q NP_000290.2 546 SDAIRTYLNLMGKS-KKDATLEACAGALQNLTASK-GLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
13078 Q Consensus 546 ~G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s-~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
13079 .++++.|..++. + .++.++..++.+|..++... .. . ....+. ..+++.|...+.+.++.++..++.+|..++
13080 T Consensus 42 ~~il~~l~~~l~-~~~~~~vr~~a~~~L~~l~~~~~~~---~-~~~~~~-~~~~~~l~~~l~~~~~~vr~~a~~~L~~l~ 115 (972)
13081 T 6S47_Bi 42 WKIVDVLSKFIK-PKNPSLVRESAMLIISNIAQFFSGK---P-PQEAYL-LPFFNVALDCISDKENTVKRAAQHAIDSLL 115 (972)
13082 T ss_pred ccHHHHHHHHcC-CCCCHHHHHHHHHHHHHHHhcCCCh---h-hcHHHH-HHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
13083 Confidence 346777777777 4 56778888999998887643 10 0 001111 236777778888778889999999999887
13084
13085
13086 Q NP_000290.2 624 RHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
13087 Q Consensus 624 ~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
13088 ..... ......+++.|..++.+. .++.++..++.+|+.++..............+++.|+..+.+. ++.++..
13089 T Consensus 116 ~~~~~-~~~~~~~~~~l~~~l~~~-----~~~~vr~~a~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~l~d~-~~~vr~~ 188 (972)
13090 T 6S47_Bi 116 NCFPM-EALTCFVLPTILDYLSSG-----AKWQAKMAALSVVDRIREDSANDLLELTFKDAVPVLTDVATDF-KPELAKQ 188 (972)
13091 T ss_pred hcCCH-HhhHhchHHHHHHHcCCC-----CCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCC-CHHHHHH
13092 Confidence 65111 111113566677776652 1278889999999998554322211112234677777788766 7889999
13093
13094
13095 Q NP_000290.2 704 ARLLLSDMWS 713 (747)
13096 Q Consensus 704 AL~aLsnL~~ 713 (747)
13097 ++.+|..+..
13098 T Consensus 189 a~~~L~~l~~ 198 (972)
13099 T 6S47_Bi 189 GYKTLLDYVS 198 (972)
13100 T ss_pred HHHHHHHHHH
13101 Confidence 9999988775
13102
13103
13104 No 336
13105 >6QH5_B AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
13106 Probab=87.12 E-value=0.034 Score=55.81 Aligned_cols=142 Identities=13% Similarity=0.105 Sum_probs=94.9 Template_Neff=12.900
13107
13108 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13109 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13110 .++.++..+. ++++.++..++.+|..+....+. . ...+++.+...+.+.++.++..++.+|..+.....
13111 T Consensus 50 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 118 (592)
13112 T 6QH5_B 50 LFPDVVNCMQ-TDNLELKKLVYLYLMNYAKSQPD--------M--AIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKI 118 (592)
13113 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCHH--------H--HHHHHHHHHHHccCCCHHHHHHHHHHHHHHcchhh
13114 Confidence 4555666666 46677888888888887654221 1 13456667777778888899999999888765311
13115
13116
13117 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
13118 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
13119 ...+++.+...+.+ .++.++..++.+|..+....+.. ......++.+...+.+. ++.++..++.+
13120 T Consensus 119 -----~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~---~~~~~~~~~l~~~l~d~-~~~vr~~a~~~ 183 (592)
13121 T 6QH5_B 119 -----TEYLCEPLRKCLKD------EDPYVRKTAAVCVAKLHDINAQM---VEDQGFLDSLRDLIADS-NPMVVANAVAA 183 (592)
13122 T ss_pred -----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCchh---hcCccHHHHHHHHhCCC-CHHHHHHHHHH
13123 Confidence 12345556666655 36788899999999887643221 12234567777777765 77888889888
13124
13125
13126 Q NP_000290.2 708 LSDMWSSK 715 (747)
13127 Q Consensus 708 LsnL~~~~ 715 (747)
13128 |..+....
13129 T Consensus 184 l~~~~~~~ 191 (592)
13130 T 6QH5_B 184 LSEISESH 191 (592)
13131 T ss_pred HHHHHhcC
13132 Confidence 88887654
13133
13134
13135 No 337
13136 >5A1V_G ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT; TRANSPORT PROTEIN, COPI, COATOMER, COATED; 21.0A {SACCHAROMYCES CEREVISIAE}
13137 Probab=87.07 E-value=0.037 Score=61.89 Aligned_cols=105 Identities=19% Similarity=0.265 Sum_probs=67.3 Template_Neff=10.900
13138
13139 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH 625 (747)
13140 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~ 625 (747)
13141 ..++.|..++. +.++.++..|+.+|..+..... . ....+..++..+ .+.+..++..++.+|..+...
13142 T Consensus 259 ~~~~~L~~~l~-~~~~~vr~~a~~~L~~l~~~~~---------~--~~~~~~~l~~~l~~~~~~~vr~~al~~L~~l~~~ 326 (968)
13143 T 5A1V_G 259 RFIRCIYNLLQ-SSSPAVKYEAAGTLVTLSSAPT---------A--IKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEH 326 (968)
13144 T ss_dssp HHHHHHHHSCC-SSSCSSCCTTHHHHTGGGCSTH---------H--HHHHHHHHHHHHHCCCCCCTTCCCCSCSSSSCSC
13145 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHhCCCHH---------H--HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHhhC
13146 Confidence 35666777777 4667788888888887765311 0 123455566666 566778888999999988753
13147
13148
13149 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
13150 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
13151 +.....+ ..+++.+...+.+ .+..++..++.+|..+..
13152 T Consensus 327 ~~~~~~~-~~~~~~l~~~l~~------~~~~vr~~al~~L~~l~~ 364 (968)
13153 T 5A1V_G 327 PAHERVL-QDLVMDILRVLST------PDLEVRKKTLQLALDLVS 364 (968)
13154 T ss_dssp CSSCSSC-SHHHHHHTSCSSS------SCHHHHHHHHHHHHHHSS
13155 T ss_pred cchHHHH-HHHHHHHHHHhCC------CCHHHHHHHHHHHHHHcC
13156 Confidence 2211111 2345556666655 356788888888888765
13157
13158
13159 No 338
13160 >3TJZ_B ADP-ribosylation factor 1, Coatomer subunit; protein trafficking, Golgi membrane, protein; HET: GNP; 2.9A {Saccharomyces cerevisiae}
13161 Probab=86.96 E-value=0.036 Score=52.53 Aligned_cols=16 Identities=25% Similarity=-0.029 Sum_probs=8.2 Template_Neff=12.100
13162
13163 Q NP_000290.2 697 SPKAAEAARLLLSDMW 712 (747)
13164 Q Consensus 697 d~eVr~aAL~aLsnL~ 712 (747)
13165 ++.++..++.+|..+.
13166 T Consensus 225 ~~~~~~~~~~~l~~~~ 240 (355)
13167 T 3TJZ_B 225 SPFAYCMMIRVASRQL 240 (355)
13168 T ss_pred CHHHHHHHHHHHHHhC
13169 Confidence 4445555555555544
13170
13171
13172 No 339
13173 >2IW3_B ELONGATION FACTOR 3A; ACETYLATION, ATP-BINDING, ELONGATION FACTOR, PROTEIN; HET: MSE, ADP, SO4; 2.4A {SACCHAROMYCES CEREVISIAE}
13174 Probab=86.93 E-value=0.037 Score=61.15 Aligned_cols=151 Identities=9% Similarity=0.010 Sum_probs=98.6 Template_Neff=11.700
13175
13176 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
13177 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
13178 .+++.|+..+. +.++.++..++.++..+...... .... ....+++.+...+.+.++.++..++.+|..++...
13179 T Consensus 54 ~~~~~l~~~l~-~~~~~~~~~~~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~d~~~~vr~~a~~~L~~l~~~~ 126 (986)
13180 T 2IW3_B 54 HFFGELAKGIK-DKKTAANAMQAVAHIANQSNLSP-----SVEP-YIVQLVPAICTNAGNKDKEIQSVASETLISIVNAV 126 (986)
13181 T ss_dssp HHHHHHHHHHT-STTTHHHHHHHHHHHSCTTTCCT-----TTHH-HHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHHHS
13182 T ss_pred HHHHHHHHhhc-CHHHHHHHHHHHHHHHHhccCCc-----chHH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhc
13183 Confidence 35666777776 35566676777777766643221 1111 12356777788888788889999999999887652
13184
13185
13186 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLL-TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
13187 Q Consensus 627 e~~~ll~~giI~~Ll~LL-~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
13188 .... ...+++.+...+ .+ .++.++..++.+|..++...+....... ..+++.|..++.+. +..++..|+
13189 T Consensus 127 ~~~~--~~~~l~~l~~~l~~~------~~~~vr~~al~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~d~-~~~vr~~a~ 196 (986)
13190 T 2IW3_B 127 NPVA--IKALLPHLTNAIVET------NKWQEKIAILAAFSAMVDAAKDQVALRM-PELIPVLSETMWDT-KKEVKAAAT 196 (986)
13191 T ss_dssp CGGG--HHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHSHHHHHHHH-HHHHHHHHHHTTCS-CHHHHHHHH
13192 T ss_pred CHHH--HHHHHHHHHHHHhhc------CCHHHHHHHHHHHHHHHHHCHHHHHhhH-HHHHHHHHHhcCcC-CHHHHHHHH
13193 Confidence 2111 224566677777 44 3678889999999988865332221111 34677788888766 778999999
13194
13195
13196 Q NP_000290.2 706 LLLSDMWSS 714 (747)
13197 Q Consensus 706 ~aLsnL~~~ 714 (747)
13198 .+|..++..
13199 T Consensus 197 ~~l~~l~~~ 205 (986)
13200 T 2IW3_B 197 AAMTKATET 205 (986)
13201 T ss_dssp HHHHHHGGG
13202 T ss_pred HHHHHHHHh
13203 Confidence 999888764
13204
13205
13206 No 340
13207 >5NZR_B Coatomer subunit alpha, Coatomer subunit; COPI, coatomer, coated vesicles, Transport; 9.2A {Mus musculus}
13208 Probab=86.79 E-value=0.04 Score=61.63 Aligned_cols=105 Identities=19% Similarity=0.265 Sum_probs=67.8 Template_Neff=10.900
13209
13210 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH 625 (747)
13211 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~ 625 (747)
13212 ..++.|..++. +.++.++..|+.+|..+..... . ....+..++..+ .+.+..++..++.+|..+...
13213 T Consensus 259 ~~~~~L~~~l~-~~~~~vr~~a~~~L~~l~~~~~---------~--~~~~~~~l~~~l~~~~~~~vr~~al~~L~~l~~~ 326 (968)
13214 T 5NZR_B 259 RFIRCIYNLLQ-SSSPAVKYEAAGTLVTLSSAPT---------A--IKAAAQCYIDLIIKESDNNVKLIVLDRLVELKEH 326 (968)
13215 T ss_dssp HHHHHHHHHTS-CCSHHHHHHHHHHHHHHCCCHH---------H--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCC
13216 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHhCCCHH---------H--HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHhhC
13217 Confidence 35667777777 4667788888888887765311 0 123455566666 566788899999999988753
13218
13219
13220 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
13221 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
13222 ......+ ..+++.+...+.+ .+..++..++.+|..+..
13223 T Consensus 327 ~~~~~~~-~~~~~~l~~~l~~------~~~~vr~~al~~L~~l~~ 364 (968)
13224 T 5NZR_B 327 PAHERVL-QDLVMDILRVLST------PDLEVRKKTLQLALDLVS 364 (968)
13225 T ss_dssp TTCCHHH-HHHHHHHHHGGGS------CCHHHHHHHHHHHHTTCS
13226 T ss_pred cchHHHH-HHHHHHHHHHhCC------CCHHHHHHHHHHHHHHcC
13227 Confidence 2211111 2345556666655 356788888888888765
13228
13229
13230 No 341
13231 >4P6Z_B BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
13232 Probab=86.78 E-value=0.037 Score=55.91 Aligned_cols=142 Identities=14% Similarity=0.108 Sum_probs=93.4 Template_Neff=12.700
13233
13234 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13235 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13236 .++.++..+. +.++.++..++.+|..+....+. . ...+++.+...+.+.++.++..|+.+|..+.....
13237 T Consensus 66 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 134 (600)
13238 T 4P6Z_B 66 LFPDVVNCMQ-TDNLELKKLVYLYLMNYAKSQPD--------M--AIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKI 134 (600)
13239 T ss_pred hHHHHHHhcc-CCCHHHHHHHHHHHHHhccCCHh--------H--HHHHHHHHHHHccCCCHHHHHHHHHHHhcCCchHH
13240 Confidence 4455666666 46677888888888877653221 1 12355666667777788888889888888764311
13241
13242
13243 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
13244 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
13245 ...+++.+...+.+ .++.++..++.+|..+....+.. +....+++.+...+.+. ++.++..++.+
13246 T Consensus 135 -----~~~~~~~l~~~l~~------~~~~vr~~a~~~L~~l~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~~~ 199 (600)
13247 T 4P6Z_B 135 -----TEYLCEPLRKCLKD------EDPYVRKTAAVCVAKLHDINAQL---VEDQGFLDTLKDLISDS-NPMVVANAVAA 199 (600)
13248 T ss_pred -----HHHHHHHHHHhcCC------CCHHHHHHHHHHHHHHHhhChHH---hhccChHHHHHHHhcCC-CHHHHHHHHHH
13249 Confidence 12345556666655 36788899999999887643221 11234567777777766 77888999998
13250
13251
13252 Q NP_000290.2 708 LSDMWSSK 715 (747)
13253 Q Consensus 708 LsnL~~~~ 715 (747)
13254 |..+....
13255 T Consensus 200 l~~l~~~~ 207 (600)
13256 T 4P6Z_B 200 LSEIAESH 207 (600)
13257 T ss_pred HHHHHhhC
13258 Confidence 88887653
13259
13260
13261 No 342
13262 >5VCH_A Kap123; Bidding yeast karyopherin, 23 HEAT; HET: MSE; 2.35A {Kluyveromyces lactis}
13263 Probab=86.69 E-value=0.038 Score=60.48 Aligned_cols=153 Identities=11% Similarity=0.110 Sum_probs=80.3 Template_Neff=12.900
13264
13265 Q NP_000290.2 550 RTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH-PL 627 (747)
13266 Q Consensus 550 ~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~-~e 627 (747)
13267 +.+...+. +.++.++..++.++..++..... ... ....+++.++..+ .+.++.++..++.++..+... +.
13268 T Consensus 869 ~~l~~~~~-~~~~~~r~~~~~~l~~l~~~~~~------~~~-~~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~ 940 (1116)
13269 T 5VCH_A 869 PVILQLCQ-SKSKNKRSFAVGALSEIALGMRD------ENP-FIQELLEALIISLTNDKSLEVRCNASYGVGLLIEYSSF 940 (1116)
13270 T ss_dssp HHHHHHTT-CSCHHHHHHHHHHHHHHHHHHGG------GCT-THHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCCS
13271 T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHhCCC------Cch-hHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCc
13272 Confidence 33444443 24456677777777777653221 111 1134555555553 345678888999999888765 21
13273
13274
13275 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGN----------TSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
13276 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~----------~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
13277 . ...+ ..+++.+...+...... ......++..++.+|+.+....+... .-..+++.++..+....
13278 T Consensus 941 ~~~~~~-~~il~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~---~~~~~l~~~~~~l~~~~ 1016 (1116)
13279 T 5VCH_A 941 DVSAIY-SPVLKSLYEILSVADEKNLATEDDEATKEIVDRTFSNVCGCVARMILKHQNLV---PLEHTIPALLSHLPFNT 1016 (1116)
13280 T ss_dssp CCHHHH-HHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHHHCGGGS---CHHHHHHHHHTTCSCSS
13281 T ss_pred chhhhH-HHHHHHHHHHhcchhHhccCCCCchhhHHHHHHHHHHHHHHHHHHHHHCcccC---CHHHHHHHHHhcCCCCC
13282 Confidence 1 1111 23555565555421000 00245667788888888876533211 11234555555553221
13283
13284
13285 Q NP_000290.2 697 SPKAAEAARLLLSDMWSS 714 (747)
13286 Q Consensus 697 d~eVr~aAL~aLsnL~~~ 714 (747)
13287 +...+..++.+|..+...
13288 T Consensus 1017 ~~~~~~~~~~~l~~l~~~ 1034 (1116)
13289 T 5VCH_A 1017 AFEEYDPIFKLFLKLFQE 1034 (1116)
13290 T ss_dssp CGGGHHHHHHHHHHHHHT
13291 T ss_pred chhhhHHHHHHHHHHHHh
13292 Confidence 455666677777666653
13293
13294
13295 No 343
13296 >6BCU_A mTOR, Target of rapamycin complex; PIKK, TRANSFERASE; HET: ATP, GTP; 3.43A {Homo sapiens}
13297 Probab=86.66 E-value=0.04 Score=67.95 Aligned_cols=131 Identities=8% Similarity=0.114 Sum_probs=72.7 Template_Neff=11.600
13298
13299 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-L 627 (747)
13300 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e 627 (747)
13301 ++.|...+.+.....++..++.+|..++..... ....+ -..+++.+...+.+.++.++..++.+|+.++... .
13302 T Consensus 952 ~~~l~~~l~~~~~~~~~~~a~~~l~~i~~~~~~-----~~~~~-l~~l~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~ 1025 (2549)
13303 T 6BCU_A 952 MVALMRIFRDQSLSHHHTMVVQAITFIFKSLGL-----KCVQF-LPQVMPTFLNVIRVCDGAIREFLFQQLGMLVSFVKS 1025 (2549)
13304 T ss_dssp HHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHTT-----GGGGG-HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHGG
13305 T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHcCc-----chHHh-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
13306 Confidence 555666665222345777888888888764321 11111 2456777778887777788888999998887541 1
13307
13308
13309 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRS 694 (747)
13310 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s 694 (747)
13311 . ..+. ..+++.+..++.. ...++..++.+|..++........... ..+++.++..+.+
13312 T Consensus 1026 ~~~~~~-~~i~~~l~~~~~~-------~~~v~~~~~~~l~~l~~~~~~~~~~~~-~~l~~~l~~~l~~ 1084 (2549)
13313 T 6BCU_A 1026 HIRPYM-DEIVTLMREFWVM-------NTSIQSTIILLIEQIVVALGGEFKLYL-PQLIPHMLRVFMH 1084 (2549)
13314 T ss_dssp GGGGGH-HHHHHHHHHTCCS-------CHHHHHHHHHHHHHHHHHHGGGGGGTH-HHHHHHHHHHHHS
13315 T ss_pred hcHHhH-HHHHHHHHHHHhc-------CHHHHHHHHHHHHHHHHHhcHhhHhHH-HHHHHHHHHHHhc
13316 Confidence 1 1111 2234444444433 244677788888887654222111111 2345555555543
13317
13318
13319 No 344
13320 >6BCX_B mTOR, Target of rapamycin complex; PIKK, TRANSFERASE; HET: ATP; 3.0A {Homo sapiens}
13321 Probab=86.66 E-value=0.04 Score=67.95 Aligned_cols=131 Identities=8% Similarity=0.114 Sum_probs=72.7 Template_Neff=11.600
13322
13323 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP-L 627 (747)
13324 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~-e 627 (747)
13325 ++.|...+.+.....++..++.+|..++..... ....+ -..+++.+...+.+.++.++..++.+|+.++... .
13326 T Consensus 952 ~~~l~~~l~~~~~~~~~~~a~~~l~~i~~~~~~-----~~~~~-l~~l~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~ 1025 (2549)
13327 T 6BCX_B 952 MVALMRIFRDQSLSHHHTMVVQAITFIFKSLGL-----KCVQF-LPQVMPTFLNVIRVCDGAIREFLFQQLGMLVSFVKS 1025 (2549)
13328 T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHcCc-----chHHh-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
13329 Confidence 555666665222345777888888888764321 11111 2456777778887777788888999998887541 1
13330
13331
13332 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRS 694 (747)
13333 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s 694 (747)
13334 . ..+. ..+++.+..++.. ...++..++.+|..++........... ..+++.++..+.+
13335 T Consensus 1026 ~~~~~~-~~i~~~l~~~~~~-------~~~v~~~~~~~l~~l~~~~~~~~~~~~-~~l~~~l~~~l~~ 1084 (2549)
13336 T 6BCX_B 1026 HIRPYM-DEIVTLMREFWVM-------NTSIQSTIILLIEQIVVALGGEFKLYL-PQLIPHMLRVFMH 1084 (2549)
13337 T ss_pred hcHHhH-HHHHHHHHHHHhc-------CHHHHHHHHHHHHHHHHHhcHhhHhHH-HHHHHHHHHHHhc
13338 Confidence 1 1111 2234444444433 244677788888887654222111111 2345555555543
13339
13340
13341 No 345
13342 >5IFE_C Splicing factor 3B subunit 5; pre-mRNA splicing, U2 snRNP, essential; 3.1A {Homo sapiens}
13343 Probab=86.43 E-value=0.045 Score=64.20 Aligned_cols=110 Identities=15% Similarity=0.148 Sum_probs=59.4 Template_Neff=9.800
13344
13345 Q NP_000290.2 249 KAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ 328 (747)
13346 Q Consensus 249 ~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~ 328 (747)
13347 .+...+.+.+..++..++.+|..++..........+...++..+...+.+.+..++..++.+|..++.............
13348 T Consensus 935 ~L~~~L~~~~~~vR~~A~~~L~~l~~~~~~~~~~~~~~~l~~~L~~~L~d~~~~vr~~al~aL~~l~~~~~~~~l~~~l~ 1014 (1304)
13349 T 5IFE_C 935 TVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIK 1014 (1304)
13350 T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHhccCcCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhChHHhcccHH
13351 Confidence 33344445566777778888877765322111111112345556666665566777777777777764432111001112
13352
13353
13354 Q NP_000290.2 329 NGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
13355 Q Consensus 329 ~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
13356 .+++.+...+. ..+..++..++.++..++.
13357 T Consensus 1015 ~ll~~L~~~L~-~~~~~Vr~~ai~~L~~i~~ 1044 (1304)
13358 T 5IFE_C 1015 DLLPRLTPILK-NRHEKVQENCIDLVGRIAD 1044 (1304)
13359 T ss_pred hHHHHHHHHhC-CCCHHHHHHHHHHHHHHHh
13360 Confidence 35555666665 4455667777777776665
13361
13362
13363 No 346
13364 >6AHD_1 Pre-mRNA-processing-splicing factor 8, Thioredoxin-like protein; Spliceosome, SPLICING; HET: IHP, GTP; 3.8A {Homo sapiens}
13365 Probab=86.43 E-value=0.045 Score=64.20 Aligned_cols=110 Identities=15% Similarity=0.148 Sum_probs=59.4 Template_Neff=9.800
13366
13367 Q NP_000290.2 249 KAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQ 328 (747)
13368 Q Consensus 249 ~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll~~ 328 (747)
13369 .+...+.+.+..++..++.+|..++..........+...++..+...+.+.+..++..++.+|..++.............
13370 T Consensus 935 ~L~~~L~~~~~~vR~~A~~~L~~l~~~~~~~~~~~~~~~l~~~L~~~L~d~~~~vr~~al~aL~~l~~~~~~~~l~~~l~ 1014 (1304)
13371 T 6AHD_1 935 TVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIK 1014 (1304)
13372 T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHhccCcCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhChHHhcccHH
13373 Confidence 33344445566777778888877765322111111112345556666665566777777777777764432111001112
13374
13375
13376 Q NP_000290.2 329 NGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
13377 Q Consensus 329 ~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
13378 .+++.+...+. ..+..++..++.++..++.
13379 T Consensus 1015 ~ll~~L~~~L~-~~~~~Vr~~ai~~L~~i~~ 1044 (1304)
13380 T 6AHD_1 1015 DLLPRLTPILK-NRHEKVQENCIDLVGRIAD 1044 (1304)
13381 T ss_pred hHHHHHHHHhC-CCCHHHHHHHHHHHHHHHh
13382 Confidence 35555666665 4455667777777776665
13383
13384
13385 No 347
13386 >6LTJ_L Histone H3.2, Histone H4, Histone; Chromatin remodeler, Complex, GENE REGULATION; 3.7A {Xenopus laevis}
13387 Probab=86.40 E-value=0.056 Score=63.52 Aligned_cols=152 Identities=14% Similarity=0.061 Sum_probs=89.3 Template_Neff=5.100
13388
13389 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-----NSD----------VVRSGASLLSNMSRHPL 627 (747)
13390 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-----d~e----------Vr~~AL~aLsnLa~~~e 627 (747)
13391 .+++.++.+|.+|+....- .. ....+ ...++..|+.++... ++. .+..|+.+|+.|+..+.
13392 T Consensus 1065 ~LRenaLviLaNIAg~LdL--s~-~~e~I-~~~ild~LLhwlv~~sa~a~Dp~~~~~~~~~lSp~~lALEaLsKLsv~d~ 1140 (1295)
13393 T 6LTJ_L 1065 MLRENTLVTLANISGQLDL--SP-YPESI-CLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDN 1140 (1295)
13394 T ss_dssp HHHHHHHHHHHHHGGGCCC--SS-SCHHH-HHHHHHHHHHHHHCCSSSSSSCCTTSCTTCCCCHHHHHHHHHHHHHTSHH
13395 T ss_pred HHHHHHHHHHHHHHcccCC--CC-CChHh-HHHHHHHHHHHHcCcChhcCChhhccCCCCCCCHHHHHHHHHHHHhCCCc
13396 Confidence 4566788888888764220 00 01111 112455555554321 111 12348899999987643
13397
13398
13399 Q NP_000290.2 628 LH-RVMG-------NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK-QYFSSSMLNNIINLCRSSA-- 696 (747)
13400 Q Consensus 628 ~~-~ll~-------~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~-~Lve~giL~~Ll~LL~s~~-- 696 (747)
13401 +. .++. ..++..|+.+|... .+..+++.++.+|.+|+........ ...+.+.+..|+.+|+...
13402 T Consensus 1141 N~dlLlat~p~srle~Ll~~LV~lL~~~-----ed~~lrE~AL~lL~~Ls~~~~~~ar~ia~~~g~I~~LV~fLE~~~~~ 1215 (1295)
13403 T 6LTJ_L 1141 NVDLILATPPFSRLEKLYSTMVRFLSDR-----KNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAA 1215 (1295)
13404 T ss_dssp HHHHHHTSSCHHHHHHHHHHHHHHHHHC-----SSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHHHHHHH
13405 T ss_pred hHHHHHhCCCHHHHHHHHHHHHHHhcCC-----CCHHHHHHHHHHHHHHHcCCHHHHHHHHHhcCHHHHHHHHHHHHHHH
13406 Confidence 32 2222 23566677777652 2456788999999999875433322 3334567888888876430
13407
13408
13409 Q NP_000290.2 697 ---------------------SPKAAEAARLLLSDMWSSKELQGVLRQ 723 (747)
13410 Q Consensus 697 ---------------------d~eVr~aAL~aLsnL~~~~~~~~~~~~ 723 (747)
13411 ...+++.|+.+|..|+...+-...+.+
13412 T Consensus 1216 ~~~~~~~~~~~~~~npe~~gtS~~m~rRAA~aL~~La~vp~NR~~F~~ 1263 (1295)
13413 T 6LTJ_L 1216 TQFQQSQASLLHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTL 1263 (1295)
13414 T ss_dssp HHHCC--------------CCCSHHHHHHHHHHHHHHTTSSSHHHHTT
13415 T ss_pred HHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHhcChhhHHHHHH
13416 Confidence 134567788899999887777776665
13417
13418
13419 No 348
13420 >6CRI_R Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
13421 Probab=86.18 E-value=0.043 Score=55.49 Aligned_cols=139 Identities=17% Similarity=0.118 Sum_probs=92.2 Template_Neff=12.500
13422
13423 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13424 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13425 .+..++..+. +.+..++..++.+|..+....+. . ...+++.+...+.+.++.++..++.+|..+.....
13426 T Consensus 63 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 131 (585)
13427 T 6CRI_R 63 GQLECLKLIA-SQKFTDKRIGYLGAMLLLDERQD--------V--HLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEM 131 (585)
13428 T ss_pred HHHHHHHHHh-CCCchHHHHHHHHHHHhCCCChH--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCHHH
13429 Confidence 3455666776 46777888888888887754221 1 12345666777777778888888888887764311
13430
13431
13432 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
13433 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
13434 ...+++.+...+.+ .++.++..++.+|..+....+... ...++.+...+.+. ++.++..++.+
13435 T Consensus 132 -----~~~~~~~l~~~l~~------~~~~vr~~a~~~L~~~~~~~~~~~-----~~~~~~l~~~l~~~-~~~vr~~a~~~ 194 (585)
13436 T 6CRI_R 132 -----CRDLAGEVEKLLKT------SNSYLRKKAALCAVHVIRKVPELM-----EMFLPATKNLLNEK-NHGVLHTSVVL 194 (585)
13437 T ss_pred -----HHHHHHHHHHHHhC------CChHHHHHHHHHHHHHHHHCHHHH-----HHHHHHHHHHHcCC-CHHHHHHHHHH
13438 Confidence 11345556666665 367888899999998876432221 24566777777665 77888888888
13439
13440
13441 Q NP_000290.2 708 LSDMWSS 714 (747)
13442 Q Consensus 708 LsnL~~~ 714 (747)
13443 |..+...
13444 T Consensus 195 l~~l~~~ 201 (585)
13445 T 6CRI_R 195 LTEMCER 201 (585)
13446 T ss_pred HHHHHHh
13447 Confidence 8887643
13448
13449
13450 No 349
13451 >5DFZ_B Vacuolar protein sorting-associated protein 38; Vps34, Vps15, Vps30, Vps38, Autophagy; 4.4A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
13452 Probab=85.86 E-value=0.051 Score=64.44 Aligned_cols=292 Identities=12% Similarity=0.004 Sum_probs=157.7 Template_Neff=9.900
13453
13454 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQ-AIGAYYIQHTCFQDESA--KQQVYQLGGICKLVDLL---RSPNQNVQQAAAGALRNLVFRS 318 (747)
13455 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr-~sAL~aLsnLs~~~~~~--~~~li~~~IL~~Ll~lL---~s~d~eVr~~AL~aLs~La~~~ 318 (747)
13456 .+++.|+..+.+.+..++ ..++..|..+....... ........+++.|+.++ .+.++.++..+..+|..+....
13457 T Consensus 464 ~~i~~L~~~l~d~~~~vR~~~a~~~L~~l~~~~~~~~~~~~~~~~~~lp~Li~~L~~~~d~~~~vr~~aa~~l~~~~~~~ 543 (1460)
13458 T 5DFZ_B 464 RVVPYFVCCFEDSDQDVQALSLLTLIQVLTSVRKLNQLNENIFVDYLLPRLKRLLISNRQNTNYLRIVFANCLSDLAIII 543 (1460)
13459 T ss_pred cchHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCccCCccccCcCChHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHc
13460 Confidence 455667777777788889 89999998886543211 11223345678888888 7777888888888887774321
13461
13462
13463 Q NP_000290.2 319 TTN------------KLETRRQNGIREAVSL----LRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIP 382 (747)
13464 Q Consensus 319 ~~~------------~~~ll~~~IL~~Ll~l----L~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL~~~ 382 (747)
13465 ... .........++.+..+ +. +.++.++..++.+|..+........ ....+++.|+.+|..+
13466 T Consensus 544 ~~~~l~~l~~~~~~~~~~~l~~~~~~~l~~ll~~~l~-d~~~~VR~~A~~aL~~l~~~~~~~~-~~~~~l~~Li~ll~d~ 621 (1460)
13467 T 5DFZ_B 544 NRFQEFTFAQHCNDNSSTKYSAKLIQSVEDLTVSFLT-DNDTYVKMALLQNILPLCKFFGRER-TNDIILSHLITYLNDK 621 (1460)
13468 T ss_pred CHHHHHHHHHhcccChhHHHHcChHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHhccccccc-cHHhHHHHHHHHhcCC
13469 Confidence 100 0001111223333333 33 4567889999999988876422111 1135666677766321
13470
13471
13472 Q NP_000290.2 383 FSGWCDGNSNMSREVVDPEVFFNATGCLRKRLGMRELLALVPQRATSSRVNLSSADAGRQTMRNYSGLIDSLMAYVQNCV 462 (747)
13473 Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (747)
13474 +++|-.+|..+|.+--. .++ ....+ ..++..|...+.
13475 T Consensus 622 ----------------~~~VR~~a~~aL~~i~~------~~~---------------~~~~~---~~~i~~L~~~l~--- 658 (1460)
13476 T 5DFZ_B 622 ----------------DPALRVSLIQTISGISI------LLG---------------TVTLE---QYILPLLIQTIT--- 658 (1460)
13477 T ss_pred ----------------CHHHHHHHHHHHHHHHh------hcC---------------chhhc---hhHHHHHHHHhc---
13478 Confidence 35555566666543110 000 00000 011222222111
13479
13480
13481 Q NP_000290.2 463 AASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGW 542 (747)
13482 Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~ 542 (747)
13483 |.. .+| | .+|-.+. +.+.. ..+.. .
13484 T Consensus 659 ------d~~----------------~~v--R-----~~a~~aL------~~~~~-----------------~~~~~--~- 683 (1460)
13485 T 5DFZ_B 659 ------DSE----------------ELV--V-----ISVLQSL------KSLFK-----------------TGLIR--K- 683 (1460)
13486 T ss_pred ------CCC----------------HHH--H-----HHHHHHH------HHhcC-----------------Ccchh--h-
13487 Confidence 110 000 0 0111111 00000 00000 0
13488
13489
13490 Q NP_000290.2 543 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNM 622 (747)
13491 Q Consensus 543 lve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnL 622 (747)
13492 ....++++.|..++. +.++.++..|+.+|..+...... . . ....+++.|+.+|.++++.++..|+.+|..+
13493 T Consensus 684 ~~~~~~i~~l~~~l~-d~~~~VR~~A~~al~~l~~~~~~------~-~-~~~~~l~~L~~~l~d~~~~vr~~a~~aL~~~ 754 (1460)
13494 T 5DFZ_B 684 KYYIDISKTTSPLLL-HPNNWIRQFTLMIIIEIINKLSK------A-E-VYCILYPIIRPFFEFDVEFNFKSMISCCKQP 754 (1460)
13495 T ss_pred cccchhHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhCC------H-H-HHHHHHHHHHHHhcCCCHHHHHHHHHHhCCC
13496 Confidence 001246778888888 57889999999999988764221 1 1 1246788899999999999999999999998
13497
13498
13499 Q NP_000290.2 623 SRHPLLH----RVMGNQVFPEVTRLLT 645 (747)
13500 Q Consensus 623 a~~~e~~----~ll~~giI~~Ll~LL~ 645 (747)
13501 ....... ..+..+.+..+..++.
13502 T Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 781 (1460)
13503 T 5DFZ_B 755 VSRSVYNLLCSWSVRASKSLFWKKIIT 781 (1460)
13504 T ss_pred CCHHHHHHHHHHHHHhchhHHHHHHHH
13505 Confidence 7763331 2244455555555554
13506
13507
13508 No 350
13509 >2QNA_A Importin subunit beta-1, Snurportin-1; Nuclear transport, import of spliceosomal; HET: SO4; 2.84A {Homo sapiens}
13510 Probab=85.76 E-value=0.046 Score=56.33 Aligned_cols=154 Identities=11% Similarity=0.064 Sum_probs=95.8 Template_Neff=13.200
13511
13512 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQS--GNSDVVRSGASLLSNMS 623 (747)
13513 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s--~d~eVr~~AL~aLsnLa 623 (747)
13514 .++.|+..+. +.+ ..++..++.+|..++...+. . .... ....+++.+...+.+ .++.++..++.+|..++
13515 T Consensus 4 l~~~l~~~l~-~~~~~~~~~~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~~~vr~~a~~~l~~l~ 77 (762)
13516 T 2QNA_A 4 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 77 (762)
13517 T ss_pred hHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHhCCH---h-hcHH-HHHhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
13518 Confidence 4566777776 344 67888899999888764221 0 0111 113456677777764 35788999999999988
13519
13520
13521 Q NP_000290.2 624 RHP-LL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
13522 Q Consensus 624 ~~~-e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
13523 ... .. . ......+++.+...+.+ .++.++..++.+|..++..............+++.+...+.+. ++.+
13524 T Consensus 78 ~~~~~~~~~~~~~~~i~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~v 150 (762)
13525 T 2QNA_A 78 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 150 (762)
13526 T ss_pred hcCCccCCcchhHHhHHHHHHHHhCC------CCHHHHHHHHHHHHHHHHhCchhhHHhhHHhHHHHHHHHcCCC-CHHH
13527 Confidence 652 11 1 01122345555566654 3678888999999988764332222222223566666677655 7788
13528
13529
13530 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
13531 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
13532 +..++.++..+...
13533 T Consensus 151 ~~~a~~~l~~l~~~ 164 (762)
13534 T 2QNA_A 151 ALQGIEFWSNVCDE 164 (762)
13535 T ss_pred HHHHHHHHHHHHhc
13536 Confidence 88888888887754
13537
13538
13539 No 351
13540 >3WOZ_C CLIP-associating protein 2; HEAT Repeat, Microtubule binding, Tubulin; HET: MSE; 2.2A {Mus musculus}
13541 Probab=85.74 E-value=0.049 Score=48.60 Aligned_cols=154 Identities=11% Similarity=0.036 Sum_probs=91.0 Template_Neff=11.700
13542
13543 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
13544 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
13545 ..++.++..+. +.++..|..++..|..++..... . .... -..++..+...+.+.+..++..++.++..++..
13546 T Consensus 5 ~~~~~~~~~l~-~~~w~~R~~al~~l~~~~~~~~~---~-~~~~--~~~i~~~l~~~l~d~~~~v~~~al~~l~~l~~~~ 77 (232)
13547 T 3WOZ_C 5 EDVAEVLNRCA-SSNWSERKEGLLGLQNLLKNQRT---L-SRIE--LKRLCEIFTRMFADPHGKVFSMFLETLVDFIQVH 77 (232)
13548 T ss_dssp CCHHHHHHHHT-CSSHHHHHHHHHHHHHHHHTTCC---C-CHHH--HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHH
13549 T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHHHhcCcc---c-CHHH--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHc
13550 Confidence 45666777777 47888899999999888864221 0 0111 135666777777777888999999999988865
13551
13552
13553 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
13554 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
13555 ..........+++.++..+.+. ....++..+..+|..+....+. ..++ ..+++.+...+.+. ++.++..++
13556 T Consensus 78 ~~~~~~~~~~ll~~ll~~l~d~-----~~~~vr~~a~~~l~~i~~~~~~--~~~~-~~l~~~l~~~~~~~-~~~~r~~~l 148 (232)
13557 T 3WOZ_C 78 KDDLQDWLFVLLTQLLKKMGAD-----LLGSVQAKVQKALDITRESFPN--DLQF-NILMRFTVDQTQTP-SLKVKVAIL 148 (232)
13558 T ss_dssp GGGCTTTHHHHHHHHHHHTTTT-----CCHHHHHHHHHHHHHHHHHSCH--HHHH-HHHHHHHTCTTCCC-CHHHHHHHH
13559 T ss_pred hHHHHHHHHHHHHHHHHHhccc-----cCHHHHHHHHHHHHHHHHHCCc--chHH-HHHHHHhhccccCC-CHHHHHHHH
13560 Confidence 2111111123555566555441 1456788888888887543211 1111 12233333344433 567777777
13561
13562
13563 Q NP_000290.2 706 LLLSDMWSSKE 716 (747)
13564 Q Consensus 706 ~aLsnL~~~~~ 716 (747)
13565 .++..++...+
13566 T Consensus 149 ~~l~~l~~~~~ 159 (232)
13567 T 3WOZ_C 149 KYIETLAKQMD 159 (232)
13568 T ss_dssp HHHHHHHTTSC
13569 T ss_pred HHHHHHHHhcC
13570 Confidence 77777665533
13571
13572
13573 No 352
13574 >3WOZ_D CLIP-associating protein 2; HEAT Repeat, Microtubule binding, Tubulin; HET: MSE; 2.2A {Mus musculus}
13575 Probab=85.74 E-value=0.049 Score=48.60 Aligned_cols=154 Identities=11% Similarity=0.036 Sum_probs=91.0 Template_Neff=11.700
13576
13577 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
13578 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
13579 ..++.++..+. +.++..|..++..|..++..... . .... -..++..+...+.+.+..++..++.++..++..
13580 T Consensus 5 ~~~~~~~~~l~-~~~w~~R~~al~~l~~~~~~~~~---~-~~~~--~~~i~~~l~~~l~d~~~~v~~~al~~l~~l~~~~ 77 (232)
13581 T 3WOZ_D 5 EDVAEVLNRCA-SSNWSERKEGLLGLQNLLKNQRT---L-SRIE--LKRLCEIFTRMFADPHGKVFSMFLETLVDFIQVH 77 (232)
13582 T ss_dssp CCHHHHHHHHH-CSCHHHHHHHHHHHHHHHHTTCC---C-CHHH--HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHH
13583 T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHHHhcCcc---c-CHHH--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHc
13584 Confidence 45666777777 47888899999999888864221 0 0111 135666777777777888999999999988865
13585
13586
13587 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
13588 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
13589 ..........+++.++..+.+. ....++..+..+|..+....+. ..++ ..+++.+...+.+. ++.++..++
13590 T Consensus 78 ~~~~~~~~~~ll~~ll~~l~d~-----~~~~vr~~a~~~l~~i~~~~~~--~~~~-~~l~~~l~~~~~~~-~~~~r~~~l 148 (232)
13591 T 3WOZ_D 78 KDDLQDWLFVLLTQLLKKMGAD-----LLGSVQAKVQKALDITRESFPN--DLQF-NILMRFTVDQTQTP-SLKVKVAIL 148 (232)
13592 T ss_dssp GGGCGGGHHHHHHHHHHHTTSC-----CCHHHHHHHHHHHHHHHHHSCH--HHHH-HHHHHHHTCSSCCC-CHHHHHHHH
13593 T ss_pred hHHHHHHHHHHHHHHHHHhccc-----cCHHHHHHHHHHHHHHHHHCCc--chHH-HHHHHHhhccccCC-CHHHHHHHH
13594 Confidence 2111111123555566555441 1456788888888887543211 1111 12233333344433 567777777
13595
13596
13597 Q NP_000290.2 706 LLLSDMWSSKE 716 (747)
13598 Q Consensus 706 ~aLsnL~~~~~ 716 (747)
13599 .++..++...+
13600 T Consensus 149 ~~l~~l~~~~~ 159 (232)
13601 T 3WOZ_D 149 KYIETLAKQMD 159 (232)
13602 T ss_dssp HHHHHHHTTCC
13603 T ss_pred HHHHHHHHhcC
13604 Confidence 77777665533
13605
13606
13607 No 353
13608 >5DCQ_C artificial repeat proteins (alphaREP3), Fibronectin-binding; adhesin, artificial repeat proteins, complex; HET: FMT; 1.83A {synthetic construct}
13609 Probab=85.49 E-value=0.051 Score=45.36 Aligned_cols=47 Identities=15% Similarity=0.166 Sum_probs=25.2 Template_Neff=12.100
13610
13611 Q NP_000290.2 654 SEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
13612 Q Consensus 654 d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
13613 ++.++..++.+|..+... ..++.+..++.+. +..++..++.++..+.
13614 T Consensus 120 ~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~ 166 (170)
13615 T 5DCQ_C 120 DSDVRRTAAYALGEIGGE-----------RVRAAMEKLAETG-TGFARKVAVNYLETHK 166 (170)
13616 T ss_dssp SHHHHHHHHHHHHHHCHH-----------HHHHHHHHHHHHC-CHHHHHHHHHHHHTC-
13617 T ss_pred CHHHHHHHHHHHHHhchH-----------HHHHHHHHHHHcC-ChHHHHHHHHHHHhcc
13618 Confidence 455666666666555431 1344444555544 5566666766666543
13619
13620
13621 No 354
13622 >4L7M_A Putative uncharacterized protein; HEAT-repeats, Hypothetical, UNKNOWN FUNCTION; HET: MSE, GOL; 2.002A {Thermococcus onnurineus}
13623 Probab=85.26 E-value=0.051 Score=48.13 Aligned_cols=143 Identities=17% Similarity=0.105 Sum_probs=85.7 Template_Neff=12.800
13624
13625 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13626 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13627 .++.+...+. +.++.++..++.++..+... . .....++.+..++.+.++.++..++.++..++....
13628 T Consensus 120 ~~~~l~~~l~-~~~~~~~~~a~~~l~~~~~~--~----------~~~~~~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~~ 186 (269)
13629 T 4L7M_A 120 AAKTLVSLLE-SPDDMMRIETIDVLSKLQPL--E----------DSKLVRTYINELVVSPDLYTKVAGFCLFLNMLNSSA 186 (269)
13630 T ss_dssp HHHHHHHHTT-SCCHHHHHHHHHHHTTCCBS--C----------CCHHHHHHHHHHHHCSSHHHHHHHHHHHHHHGGGCS
13631 T ss_pred HHHHHHHHcC-CCCHHHHHHHHHHHHhcCCh--h----------HhhchHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCC
13632 Confidence 4556666666 35666777777777665321 0 123566777777877778889999999998875311
13633
13634
13635 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP-QLAKQYFSSSMLNNIINLCRS--SASPKAAEAA 704 (747)
13636 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~-e~~~~Lve~giL~~Ll~LL~s--~~d~eVr~aA 704 (747)
13637 ..... ..+++.+...+.+ .++.++..++.+|..+..... ....... +.+..++..+.+ . ++.++..+
13638 T Consensus 187 ~~~~~-~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~--~~~~~l~~~l~~~~~-~~~vr~~a 256 (269)
13639 T 4L7M_A 187 DSGHL-TLILDEIPSLLQN------DNEFIVELALDVLEKALSFPLLENVKIEL--LKISRIVDGLVYREG-APIIRLKA 256 (269)
13640 T ss_dssp SCCCG-GGTTTTHHHHHTC------SCHHHHHHHHHHHHHHTTSCCCSCCHHHH--HHHHHHHHHHTTCSS-CHHHHHHH
13641 T ss_pred CcchH-HHHHHHHHHHHcC------CCHHHHHHHHHHHHHHcCCccHHHHHHHH--HHHHHHHhhccCCCC-CHHHHHHH
13642 Confidence 11111 1245556666665 367888899999988875411 1111111 233344444443 3 67788888
13643
13644
13645 Q NP_000290.2 705 RLLLSDMWS 713 (747)
13646 Q Consensus 705 L~aLsnL~~ 713 (747)
13647 +.+|..+..
13648 T Consensus 257 ~~~l~~l~~ 265 (269)
13649 T 4L7M_A 257 KKVSDLIDS 265 (269)
13650 T ss_dssp HHHHHHHHH
13651 T ss_pred HHHHHHHHH
13652 Confidence 888877653
13653
13654
13655 No 355
13656 >4P6Z_B BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
13657 Probab=85.10 E-value=0.053 Score=54.64 Aligned_cols=109 Identities=13% Similarity=0.033 Sum_probs=65.8 Template_Neff=12.700
13658
13659 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
13660 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
13661 .+++.+...+.+.++.++..++.++..+....+..........+++.+...+.+.+..++..++.++..+.......
13662 T Consensus 176 ~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~--- 252 (600)
13663 T 4P6Z_B 176 GFLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYMPKDDRE--- 252 (600)
13664 T ss_pred ChHHHHHHHhcCCCHHHHHHHHHHHHHHHhhCCCcchhccCHHHHHHHHHHhhcCCHHHHHHHHHHHHHhCCCCHHH---
13665 Confidence 35566666676777788888888888887643321111112245555666666556667777777777766432211
13666
13667
13668 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
13669 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
13670 ...++..+...+. +.++.++..++.++..+..
13671 T Consensus 253 --~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~ 284 (600)
13672 T 4P6Z_B 253 --AQSICERVTPRLS-HANSAVVLSAVKVLMKFME 284 (600)
13673 T ss_pred --HHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHH
13674 Confidence 1234555555565 4566777788888777765
13675
13676
13677 No 356
13678 >5MU7_A Coatomer subunit beta, Coatomer subunit; coatomer, COPI, beta COP, delta; 2.57A {Chaetomium thermophilum var. thermophilum DSM 1495}
13679 Probab=85.09 E-value=0.053 Score=50.69 Aligned_cols=101 Identities=9% Similarity=0.074 Sum_probs=54.4 Template_Neff=12.800
13680
13681 Q NP_000290.2 598 PQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK 677 (747)
13682 Q Consensus 598 ~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~ 677 (747)
13683 +.+...+.+.++.++..++.+|..+...... ....+++.+...+.+ .+..++..++.+|..+... ..
13684 T Consensus 191 ~~l~~~l~~~~~~~~~~a~~~l~~~~~~~~~---~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~-~~--- 257 (373)
13685 T 5MU7_A 191 GTVFEGIPNAEELLQLVEIEFIRKDALHNPQ---NKPRYLRLIFDLLEA------NTSTVVYEAASSLTALTNN-PV--- 257 (373)
13686 T ss_dssp HHTGGGGGGSCHHHHHHHHHHHHHHHHHCGG---GHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHCCC-HH---
13687 T ss_pred HHHHhcCCChhHHHHHHHHHHHHHHhccCcc---cHHHHHHHHHHHHhc------CCHHHHHHHHHHHHHcCCC-HH---
13688 Confidence 3344444444444444455444444332100 012344555555544 2556677777777776542 11
13689
13690
13691 Q NP_000290.2 678 QYFSSSMLNNIINLCR-SSASPKAAEAARLLLSDMWSS 714 (747)
13692 Q Consensus 678 ~Lve~giL~~Ll~LL~-s~~d~eVr~aAL~aLsnL~~~ 714 (747)
13693 .. ...++.+...+. +. ++.++..++.+|..+...
13694 T Consensus 258 -~~-~~~~~~l~~~l~~~~-~~~vr~~a~~~l~~l~~~ 292 (373)
13695 T 5MU7_A 258 -AV-KAAAGKFIELAIKEA-DNNVKLIVLDRVDQLRQK 292 (373)
13696 T ss_dssp -HH-HHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHH
13697 T ss_pred -HH-HHHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHHh
13698 Confidence 11 135666777776 44 778888888888888865
13699
13700
13701 No 357
13702 >4UQI_B AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ENDOCYTOSIS, PROTEIN TRANSPORT, LIPID BINDING; HET: IHP; 2.79A {RATTUS NORVEGICUS}
13703 Probab=84.97 E-value=0.056 Score=55.88 Aligned_cols=142 Identities=13% Similarity=0.105 Sum_probs=95.5 Template_Neff=12.200
13704
13705 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13706 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13707 .++.++..+. ++++.++..++.++..+....+. . ...+++.+...+.+.++.++..++.+++.+.....
13708 T Consensus 50 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 118 (657)
13709 T 4UQI_B 50 LFPDVVNCMQ-TDNLELKKLVYLYLMNYAKSQPD--------M--AIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKI 118 (657)
13710 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCHh--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHhhcCCchh
13711 Confidence 4555666676 46677888888888887764221 1 13456667777777788889999999988864311
13712
13713
13714 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
13715 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
13716 ...+++.+...+.+ .++.++..++.+|..+....+.. +....+++.+..++.+. ++.++..++.+
13717 T Consensus 119 -----~~~l~~~l~~~l~~------~~~~vr~~a~~~L~~l~~~~~~~---~~~~~~~~~l~~~l~d~-~~~vr~~a~~~ 183 (657)
13718 T 4UQI_B 119 -----TEYLCEPLRKCLKD------EDPYVRKTAAVCVAKLHDINAQM---VEDQGFLDSLRDLIADS-NPMVVANAVAA 183 (657)
13719 T ss_pred -----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCHHH---hcCcchHHHHHHHhcCC-CHHHHHHHHHH
13720 Confidence 12345556666655 36788899999999887643221 12234567777777766 77889999999
13721
13722
13723 Q NP_000290.2 708 LSDMWSSK 715 (747)
13724 Q Consensus 708 LsnL~~~~ 715 (747)
13725 |..+....
13726 T Consensus 184 l~~l~~~~ 191 (657)
13727 T 4UQI_B 184 LSEISESH 191 (657)
13728 T ss_pred HHHHHhcC
13729 Confidence 88887654
13730
13731
13732 No 358
13733 >6MZE_Z Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: MG, GTP, GDP; 3.6A {Sus scrofa}
13734 Probab=84.94 E-value=0.055 Score=53.37 Aligned_cols=149 Identities=8% Similarity=0.061 Sum_probs=96.3 Template_Neff=12.900
13735
13736 Q NP_000290.2 548 AIRTYLNLM-GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
13737 Q Consensus 548 ~I~~LL~LL-~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
13738 +++.+...+ . +.++.++..++.++..++..... . .... ....+++.+...+.+.+..++..++.+|..++...
13739 T Consensus 340 ~~~~l~~~l~~-d~~~~v~~~a~~~l~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~ 413 (536)
13740 T 6MZE_Z 340 YLRVLANVIQK-DANVQAVTIAANSVQLLCNSLRS---N-FTRS-YGAIVLVPLLERTKEKKPSVNEAICSALDAVATYC 413 (536)
13741 T ss_dssp THHHHHHHHHH-CSCHHHHHHHHHHHHHHHHHTTT---C-CSSH-HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTT
13742 T ss_pred HHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHccc---c-ccHH-HHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHhc
13743 Confidence 556666776 5 46778888999999988764221 0 0101 12356677777777777788888988888887542
13744
13745
13746 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA-------KQYFSSSMLNNIINLCRSSASPK 699 (747)
13747 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~-------~~Lve~giL~~Ll~LL~s~~d~e 699 (747)
13748 .. ..+++.+...+.+ .++.++..++.+|..+........ ... ...+++.+...+.+. +..
13749 T Consensus 414 ~~-----~~~~~~l~~~l~~------~~~~vr~~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~i~~~l~~~l~~~-~~~ 480 (536)
13750 T 6MZE_Z 414 GF-----DDCLEETLNYMKH------KTPQVRIECTKFLTRMLQGWKSDGPLQNQLLFKL-LPEVTTAVLKIVNDT-QPT 480 (536)
13751 T ss_dssp TT-----SSHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHTCCCCSSSCCHHHHTC-CCCCCHHHHHHHTCS-SHH
13752 T ss_pred CH-----HHHHHHHHHHHcc------CCHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHH-HHHHHHHHHHHHcCC-CHH
13753 Confidence 11 1244555555554 367788889999888876432210 011 123566677777765 778
13754
13755
13756 Q NP_000290.2 700 AAEAARLLLSDMWSSK 715 (747)
13757 Q Consensus 700 Vr~aAL~aLsnL~~~~ 715 (747)
13758 ++..++.++..+....
13759 T Consensus 481 vr~~a~~~l~~l~~~~ 496 (536)
13760 T 6MZE_Z 481 TRNTGFECFATLMKLV 496 (536)
13761 T ss_dssp HHHHHHHHHHHHHHHH
13762 T ss_pred HHHHHHHHHHHHHHHH
13763 Confidence 9999999999888654
13764
13765
13766 No 359
13767 >4MFU_A Beta-catenin-like protein 1; ARM repeats, GENE REGULATION; 2.744A {Homo sapiens}
13768 Probab=84.81 E-value=0.067 Score=56.37 Aligned_cols=117 Identities=12% Similarity=0.116 Sum_probs=82.7 Template_Neff=8.700
13769
13770 Q NP_000290.2 610 DVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP---------QLAKQY 679 (747)
13771 Q Consensus 610 eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~---------e~~~~L 679 (747)
13772 .....++.+|.+|+..+.. ..++..++++.|+.+|.+ .+..+...++.+|.+|+.... .....+
13773 T Consensus 42 ~~L~~ai~~L~~La~~p~~~~~lv~~g~i~~Lv~LL~~------~n~~i~~~a~~~L~~Lt~~~~~~~~~~~~~~~~~~l 115 (490)
13774 T 4MFU_A 42 LDLNDIIQEMHVVATMPDLYHLLVELNAVQSLLGLLGH------DNTDVSIAVVDLLQELTDIDTLHESEEGAEVLIDAL 115 (490)
13775 T ss_dssp HHHHHHHHHHHTTTTSCCCTHHHHHTTHHHHHHHHTSC------SSHHHHHHHHHHHHHHHHGGGSSCCCHHHHHHHHHH
13776 T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHCChHHHHHHHhCC------CCHHHHHHHHHHHHHHcCcccccCChhhHHHHHHHH
13777 Confidence 3445678888888876544 455667889999999976 356788899999999987532 235566
13778
13779
13780 Q NP_000290.2 680 FSSSMLNNIINLCRS------SASPKAAEAARLLLSDMWSSK-ELQGVLRQQGFDRNMLGT 733 (747)
13781 Q Consensus 680 ve~giL~~Ll~LL~s------~~d~eVr~aAL~aLsnL~~~~-~~~~~~~~~~~~~~~~~~ 733 (747)
13782 .+.++++.|+.+|.. . +...+..++.+|.+|+... +....+.+.|+-..++..
13783 T Consensus 116 ~~~g~l~~Lv~~L~~~~e~~~~-d~~~~~~al~~L~nL~~~~~~~~~~i~~~~~l~~Ll~~ 175 (490)
13784 T 4MFU_A 116 VDGQVVALLVQNLERLDESVKE-EADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKR 175 (490)
13785 T ss_dssp HHTTHHHHHHHHHHHCCTTCHH-HHHHHHHHHHHHHHHHHHSTTHHHHHCCCCCHHHHHHH
13786 T ss_pred HhCCHHHHHHHHHHhccccccc-hHHHHHHHHHHHHHHhccCHHHHHHHHHCCHHHHHHHH
13787 Confidence 677888889888875 3 5677889999999998754 444445555554444433
13788
13789
13790 No 360
13791 >5N3U_B Phycocyanobilin lyase subunit alpha (E.C.4.-.-.-); phycobilisome, chromophorylation, phycocyanin, lyase; 1.89A {Nostoc sp. PCC 7120}
13792 Probab=84.57 E-value=0.06 Score=46.12 Aligned_cols=135 Identities=14% Similarity=0.143 Sum_probs=82.4 Template_Neff=12.400
13793
13794 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
13795 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
13796 +.++.|...+. +.++.++..++.+|..+.. ..++.+...+.+.++.++..++.+|..+...
13797 T Consensus 32 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~-----------------~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~- 92 (208)
13798 T 5N3U_B 32 AAIPTLIAVFG-YNNPTAAAIASTALVQLGE-----------------VAVPQLLTQIDDYNYGARAYSIRTLAAIADP- 92 (208)
13799 T ss_dssp GGHHHHHHHTT-SCCHHHHHHHHHHHHHHGG-----------------GGHHHHHHCCCTTCHHHHHHHHHHHHHHCCG-
13800 T ss_pred hhHHHHHHHhC-CCCHHHHHHHHHHHHHhCc-----------------chHHHHHHHhhCCCHHHHHHHHHHHHHhcCc-
13801 Confidence 45666777776 3566677777776655432 1334455666667778888888888776522
13802
13803
13804 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLA-KQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
13805 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~-~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
13806 ..++.+...+... .++.++..++.+|..+........ ........++.+..++.+. ++.++..++
13807 T Consensus 93 --------~~~~~l~~~l~~~-----~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a~ 158 (208)
13808 T 5N3U_B 93 --------RALDVLIDAAATD-----FAPSVRRAAAKGLGNLHWHKLEFPDNQTAPKKALETLLFISQDA-EWSIRYAAI 158 (208)
13809 T ss_dssp --------GGHHHHHHHHHHC-----CCHHHHHHHHHHHTTSCGGGSCTTHHHHHHHHHHHHHHHHTTCS-SHHHHHHHH
13810 T ss_pred --------chHHHHHHHHccC-----CCHHHHHHHHHHHHhhhccCCCCCCCccCChHHHHHHHHHhcCC-CHHHHHHHH
13811 Confidence 2344555555431 256788888888888864221111 1111123566666777665 677888888
13812
13813
13814 Q NP_000290.2 706 LLLSDMWSS 714 (747)
13815 Q Consensus 706 ~aLsnL~~~ 714 (747)
13816 .+|..+...
13817 T Consensus 159 ~~l~~~~~~ 167 (208)
13818 T 5N3U_B 159 VGLQGLVNI 167 (208)
13819 T ss_dssp HHHHHGGGC
13820 T ss_pred HHHHHHcCC
13821 Confidence 888887764
13822
13823
13824 No 361
13825 >6QH5_B AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
13826 Probab=84.43 E-value=0.06 Score=53.82 Aligned_cols=145 Identities=12% Similarity=0.031 Sum_probs=94.1 Template_Neff=12.900
13827
13828 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13829 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13830 .++.+...+. +.++.++..++.+|..+....+. ......+++.+...+.+.++.++..++.+|..+.....
13831 T Consensus 122 ~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~--------~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~ 192 (592)
13832 T 6QH5_B 122 LCEPLRKCLK-DEDPYVRKTAAVCVAKLHDINAQ--------MVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHP 192 (592)
13833 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCch--------hhcCccHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC
13834 Confidence 4566667776 46788889999999988764221 11224677788888888888899999999998886521
13835
13836
13837 Q NP_000290.2 628 --LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
13838 Q Consensus 628 --~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
13839 ........+++.+...+.+ .++.++..++.+|..+....+.. ....++.+...+.+. ++.++..++
13840 T Consensus 193 ~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~l~~~l~~~-~~~vr~~a~ 260 (592)
13841 T 6QH5_B 193 NSNLLDLNPQNINKLLTALNE------CTEWGQIFILDCLSNYNPKDDRE-----AQSICERVTPRLSHA-NSAVVLSAV 260 (592)
13842 T ss_pred hhhhHhHHhhHHHHHHHHhcC------CCHHHHHHHHHHHHHHhcCCHHH-----HHHHHHHHHHHhcCC-CHHHHHHHH
13843 Confidence 1111122355566666654 25677778888888877542221 112455555666655 677888888
13844
13845
13846 Q NP_000290.2 706 LLLSDMWS 713 (747)
13847 Q Consensus 706 ~aLsnL~~ 713 (747)
13848 .++..+..
13849 T Consensus 261 ~~l~~l~~ 268 (592)
13850 T 6QH5_B 261 KVLMKFLE 268 (592)
13851 T ss_pred HHHHHHHh
13852 Confidence 88877763
13853
13854
13855 No 362
13856 >2DB0_A 253aa long hypothetical protein; HEAT repeats, helical structure, Structural; 2.2A {Pyrococcus horikoshii}
13857 Probab=84.35 E-value=0.062 Score=47.21 Aligned_cols=104 Identities=10% Similarity=0.179 Sum_probs=59.0 Template_Neff=12.700
13858
13859 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRH 625 (747)
13860 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~ 625 (747)
13861 ..++.|+..+. +.++.++..++.+|..+...... . ...+++.+...+.+. ++.++..++.+|..+...
13862 T Consensus 32 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~~~~~ 100 (253)
13863 T 2DB0_A 32 SVLKKLIELLD-DDLWTVVKNAISIIMVIAKTRED--------L--YEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKE 100 (253)
13864 T ss_dssp HHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCGG--------G--HHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHH
13865 T ss_pred HHHHHHHHHcc-CCCHHHHHHHHHHHHHHHhhCHH--------H--HHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHh
13866 Confidence 45666777776 46677888888888777643110 0 122445566666666 677888888888777643
13867
13868
13869 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
13870 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
13871 ... .+ ...++.+...+.+ .++.++..++.++..+..
13872 T Consensus 101 ~~~--~~-~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~ 136 (253)
13873 T 2DB0_A 101 KPE--LV-KSMIPVLFANYRI------GDEKTKINVSYALEEIAK 136 (253)
13874 T ss_dssp CHH--HH-HHHHHHHHHHSCC------CSHHHHHHHHHHHHHHHH
13875 T ss_pred CHH--HH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
13876 Confidence 110 00 1133444444444 245556666666665544
13877
13878
13879 No 363
13880 >2DB0_B 253aa long hypothetical protein; HEAT repeats, helical structure, Structural; 2.2A {Pyrococcus horikoshii}
13881 Probab=84.35 E-value=0.062 Score=47.21 Aligned_cols=104 Identities=10% Similarity=0.179 Sum_probs=59.0 Template_Neff=12.700
13882
13883 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRH 625 (747)
13884 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~ 625 (747)
13885 ..++.|+..+. +.++.++..++.+|..+...... . ...+++.+...+.+. ++.++..++.+|..+...
13886 T Consensus 32 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~~~~~ 100 (253)
13887 T 2DB0_B 32 SVLKKLIELLD-DDLWTVVKNAISIIMVIAKTRED--------L--YEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKE 100 (253)
13888 T ss_dssp HHHHHHHHHTT-CSSHHHHHHHHHHHHHHGGGCGG--------G--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
13889 T ss_pred HHHHHHHHHcc-CCCHHHHHHHHHHHHHHHhhCHH--------H--HHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHh
13890 Confidence 45666777776 46677888888888777643110 0 122445566666666 677888888888777643
13891
13892
13893 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
13894 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
13895 ... .+ ...++.+...+.+ .++.++..++.++..+..
13896 T Consensus 101 ~~~--~~-~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~ 136 (253)
13897 T 2DB0_B 101 KPE--LV-KSMIPVLFANYRI------GDEKTKINVSYALEEIAK 136 (253)
13898 T ss_dssp CHH--HH-HHHHHHHTTTCCC------CSHHHHHHHHHHHHHHHH
13899 T ss_pred CHH--HH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
13900 Confidence 110 00 1133444444444 245556666666665544
13901
13902
13903 No 364
13904 >2JKT_A AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ALTERNATIVE SPLICING, PHOSPHOPROTEIN, PHOSPHORYLATION, PROTEIN; HET: SEP, SO4; 3.4A {MUS MUSCULUS}
13905 Probab=84.21 E-value=0.064 Score=54.84 Aligned_cols=140 Identities=15% Similarity=0.148 Sum_probs=93.7 Template_Neff=12.300
13906
13907 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13908 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13909 .++.++.++. ++++.++..++.++..+...... . ...+++.+...+.+.++.++..++.+|..+.....
13910 T Consensus 75 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~~ 143 (623)
13911 T 2JKT_A 75 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE--------L--IRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 143 (623)
13912 T ss_dssp CHHHHHHHTT-CSCHHHHHHHHHHHHHSCCCCHH--------H--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCHHH
13913 T ss_pred HHHHHHHHHc-CCCccHHHHHHHHHHHhcCCCHH--------H--HHHHHHHHHHHHhCCCHHHHHHHHHHHHhhCCHHH
13914 Confidence 4566777777 46778888888888887653221 1 12355667777777788899999999988764311
13915
13916
13917 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
13918 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
13919 ...+++.+...+ .+ .++.++..++.+|..+....+.. +.....++.+..++.+. ++.++..++
13920 T Consensus 144 -----~~~l~~~l~~~l~~~~------~~~~vr~~a~~~L~~~~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~ 208 (623)
13921 T 2JKT_A 144 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLLNDQ-HLGVVTAAT 208 (623)
13922 T ss_dssp -----HHHHTTHHHHHHHCTT------SCHHHHHHHHHHHHHHHHHCTTT---CCCCTHHHHHHGGGGCS-SHHHHHHHH
13923 T ss_pred -----HHHHHHhHHHHHHcCC------CCHHHHHHHHHHHHHHHHHChhh---cCccchHHHHHHHhcCC-CHHHHHHHH
13924 Confidence 112445556666 44 36788999999999887642221 11234567777777766 778888888
13925
13926
13927 Q NP_000290.2 706 LLLSDMWS 713 (747)
13928 Q Consensus 706 ~aLsnL~~ 713 (747)
13929 .+|..+..
13930 T Consensus 209 ~~l~~l~~ 216 (623)
13931 T 2JKT_A 209 SLITTLAQ 216 (623)
13932 T ss_dssp HHHHHHHT
13933 T ss_pred HHHHHHHH
13934 Confidence 88888775
13935
13936
13937 No 365
13938 >3LTJ_A AlphaRep-4; protein engineering, HEAT-like repeat, PROTEIN; 1.8A {synthetic}
13939 Probab=84.11 E-value=0.065 Score=45.71 Aligned_cols=28 Identities=11% Similarity=0.126 Sum_probs=18.0 Template_Neff=12.300
13940
13941 Q NP_000290.2 685 LNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
13942 Q Consensus 685 L~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
13943 ++.+...+.+. +..++..++.++..+..
13944 T Consensus 140 ~~~l~~~l~~~-~~~v~~~a~~~l~~~~~ 167 (201)
13945 T 3LTJ_A 140 VEPLIKALKDE-DGWVRQSAADALGEIGG 167 (201)
13946 T ss_dssp HHHHHHHTTCS-SHHHHHHHHHHHHHHCS
13947 T ss_pred HHHHHHHHhCC-ChHHHHHHHHHHHHhCc
13948 Confidence 44455555544 56777778888777664
13949
13950
13951 No 366
13952 >4P6Z_B BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
13953 Probab=84.10 E-value=0.065 Score=53.98 Aligned_cols=145 Identities=12% Similarity=0.047 Sum_probs=94.3 Template_Neff=12.700
13954
13955 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
13956 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
13957 .++.+...+. +.++.++..++.+|..+....+. .+....+++.+...+.+.++.++..++.+|..+....
13958 T Consensus 138 ~~~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 208 (600)
13959 T 4P6Z_B 138 LCEPLRKCLK-DEDPYVRKTAAVCVAKLHDINAQ--------LVEDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHP 208 (600)
13960 T ss_pred HHHHHHHhcC-CCCHHHHHHHHHHHHHHHhhChH--------HhhccChHHHHHHHhcCCCHHHHHHHHHHHHHHHhhCC
13961 Confidence 4566677776 46778888999999988764321 1112457778888888888899999999999888652
13962
13963
13964 Q NP_000290.2 627 L-LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
13965 Q Consensus 627 e-~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
13966 . ........+++.+...+.+ .+..++..++.+|..+....+.. ....++.+...+.+. +..++..++
13967 T Consensus 209 ~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~l~~~l~~~-~~~vr~~a~ 276 (600)
13968 T 4P6Z_B 209 SSNLLDLNPQSINKLLTALNE------CTEWGQIFILDCLANYMPKDDRE-----AQSICERVTPRLSHA-NSAVVLSAV 276 (600)
13969 T ss_pred CcchhccCHHHHHHHHHHhhc------CCHHHHHHHHHHHHHhCCCCHHH-----HHHHHHHHHHHhcCC-CHHHHHHHH
13970 Confidence 1 1111122355556666654 25677778888888876542221 123455566666655 677788888
13971
13972
13973 Q NP_000290.2 706 LLLSDMWS 713 (747)
13974 Q Consensus 706 ~aLsnL~~ 713 (747)
13975 .++..+..
13976 T Consensus 277 ~~l~~l~~ 284 (600)
13977 T 4P6Z_B 277 KVLMKFME 284 (600)
13978 T ss_pred HHHHHHHH
13979 Confidence 88777764
13980
13981
13982 No 367
13983 >6QH7_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: SEP; 3.4A {Rattus norvegicus}
13984 Probab=84.02 E-value=0.067 Score=54.81 Aligned_cols=140 Identities=15% Similarity=0.148 Sum_probs=93.1 Template_Neff=12.200
13985
13986 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
13987 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
13988 .++.++.++. ++++.++..++.++..+...... . ...+++.+...+.+.++.++..++.+|..+.....
13989 T Consensus 75 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~~ 143 (621)
13990 T 6QH7_A 75 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE--------L--IRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 143 (621)
13991 T ss_dssp CHHHHHHHTT-CSSHHHHHHHHHHHHHSCCCCHH--------H--HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCHHH
13992 T ss_pred HHHHHHHHHc-CCCccHHHHHHHHHHHHcCCCHH--------H--HHHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCHHH
13993 Confidence 4556667776 46777888888888887754221 1 12345666677777788899999999988764311
13994
13995
13996 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
13997 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
13998 ...+++.+...+ .+ .++.++..++.+|..+....+.. +.....++.+..++.+. ++.++..++
13999 T Consensus 144 -----~~~l~~~l~~~l~~~~------~~~~vr~~a~~~L~~~~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~ 208 (621)
14000 T 6QH7_A 144 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLLNDQ-HLGVVTAAT 208 (621)
14001 T ss_dssp -----HHHHTTHHHHHHTTSC------CCHHHHHHHHHHHHHHHHHCGGG---CCCCTTHHHHHHGGGCS-SHHHHHHHH
14002 T ss_pred -----HHHHHhhHHHHHHcCC------CCHHHHHHHHHHHHHHHHHChhh---cCccchHHHHHHHhcCC-CHHHHHHHH
14003 Confidence 112445556666 44 36788999999999887643221 11234567777777765 778888888
14004
14005
14006 Q NP_000290.2 706 LLLSDMWS 713 (747)
14007 Q Consensus 706 ~aLsnL~~ 713 (747)
14008 .+|..+..
14009 T Consensus 209 ~~l~~l~~ 216 (621)
14010 T 6QH7_A 209 SLITTLAQ 216 (621)
14011 T ss_dssp HHHHHHHT
14012 T ss_pred HHHHHHHH
14013 Confidence 88888775
14014
14015
14016 No 368
14017 >6CRI_R Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
14018 Probab=83.93 E-value=0.067 Score=53.93 Aligned_cols=67 Identities=18% Similarity=0.165 Sum_probs=49.2 Template_Neff=12.500
14019
14020 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
14021 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
14022 +++.+...+. +.++.++..++.+|..+....+. . ...+++.|...+.+.++.++..++.+|..+...
14023 T Consensus 135 ~~~~l~~~l~-~~~~~vr~~a~~~L~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 201 (585)
14024 T 6CRI_R 135 LAGEVEKLLK-TSNSYLRKKAALCAVHVIRKVPE--------L--MEMFLPATKNLLNEKNHGVLHTSVVLLTEMCER 201 (585)
14025 T ss_pred HHHHHHHHHh-CCChHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHh
14026 Confidence 4566777777 46778888999999888764221 1 135677788888878888999999999888754
14027
14028
14029 No 369
14030 >4UQI_B AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ENDOCYTOSIS, PROTEIN TRANSPORT, LIPID BINDING; HET: IHP; 2.79A {RATTUS NORVEGICUS}
14031 Probab=83.87 E-value=0.069 Score=55.16 Aligned_cols=145 Identities=12% Similarity=0.031 Sum_probs=94.3 Template_Neff=12.200
14032
14033 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14034 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14035 .++.+...+. +.++.++..++.+|..+....+. .+....+++.+..++.+.++.++..++.+|..+.....
14036 T Consensus 122 l~~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~--------~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 192 (657)
14037 T 4UQI_B 122 LCEPLRKCLK-DEDPYVRKTAAVCVAKLHDINAQ--------MVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHP 192 (657)
14038 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCHH--------HhcCcchHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCC
14039 Confidence 4566667776 46778888999999988764321 11224677788888888888899999999999887521
14040
14041
14042 Q NP_000290.2 628 --LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
14043 Q Consensus 628 --~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
14044 ........+++.+...+.+ .++.++..++.+|..+....... ...+++.+...+.+. +..++..++
14045 T Consensus 193 ~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~L~~l~~~~~~~-----~~~~~~~l~~~l~~~-~~~vr~~a~ 260 (657)
14046 T 4UQI_B 193 NSNLLDLNPQNINKLLTALNE------CTEWGQIFILDCLSNYNPKDDRE-----AQSICERVTPRLSHA-NSAVVLSAV 260 (657)
14047 T ss_pred hhhhhhhhhcHHHHHHHHhcC------CCHHHHHHHHHHHHhhCCCCHHH-----HHHHHHHHHHHhcCC-CHHHHHHHH
14048 Confidence 1111123355666666655 35677888888888887542221 112455566666555 667777777
14049
14050
14051 Q NP_000290.2 706 LLLSDMWS 713 (747)
14052 Q Consensus 706 ~aLsnL~~ 713 (747)
14053 .++..+..
14054 T Consensus 261 ~~l~~l~~ 268 (657)
14055 T 4UQI_B 261 KVLMKFLE 268 (657)
14056 T ss_pred HHHHHHHh
14057 Confidence 77777663
14058
14059
14060 No 370
14061 >5XAH_A Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
14062 Probab=83.55 E-value=0.071 Score=50.49 Aligned_cols=142 Identities=14% Similarity=0.108 Sum_probs=83.6 Template_Neff=12.900
14063
14064 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHP-LLHRVMGNQVFP 638 (747)
14065 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~-e~~~ll~~giI~ 638 (747)
14066 ++.++..++.++..++..... . ....+ -..+++.+...+.+. +..++..++.++..++... .........+++
14067 T Consensus 163 ~~~v~~~a~~~l~~l~~~~~~---~-~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 237 (416)
14068 T 5XAH_A 163 DAMLLEHAGEAIPALAAAAGG---D-SFAPF-FAGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLP 237 (416)
14069 T ss_dssp HHHHHHHHHHHHHHHHHHHTS---T-TTHHH-HHHHHHHHHHTTSSSSCHHHHHHHHHHHHHHHHHHGGGGGGGHHHHHH
14070 T ss_pred HHHHHHHHHHHHHHHHHHhCc---c-chHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
14071 Confidence 455667778888777654210 0 01111 133556666666543 3567778888888877541 111111123566
14072
14073
14074 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR-SSASPKAAEAARLLLSDMWSSK 715 (747)
14075 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~-s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
14076 .+...+.+ .++.++..++.+|..++...+......+ ..+++.+...+. +. ++.++..++.++..++...
14077 T Consensus 238 ~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~~-~~~v~~~a~~~l~~l~~~~ 307 (416)
14078 T 5XAH_A 238 VLLSTAQE------ADPEVRSNAIFGMGVLAEHGGHPAQEHF-PKLLGLLFPLLARER-HDRVRDNICGALARLLMAS 307 (416)
14079 T ss_dssp HHHHHTSC------SSHHHHHHHHHHHHHHHHHHHHHHHTTH-HHHHHHHTTHHHHCC-CHHHHHHHHHHHHHHHHHC
14080 T ss_pred HHHHHhhc------CCHHHHHHHHHHHHHHHHhcCchHHhhH-HHHHHHHHHHhccCC-CHHHHHHHHHHHHHHHHhC
14081 Confidence 66666655 3678889999999998865332222222 235666777776 44 6778888888888877543
14082
14083
14084 No 371
14085 >5XAH_C Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
14086 Probab=83.55 E-value=0.071 Score=50.49 Aligned_cols=142 Identities=14% Similarity=0.108 Sum_probs=83.6 Template_Neff=12.900
14087
14088 Q NP_000290.2 561 KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRHP-LLHRVMGNQVFP 638 (747)
14089 Q Consensus 561 d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~-d~eVr~~AL~aLsnLa~~~-e~~~ll~~giI~ 638 (747)
14090 ++.++..++.++..++..... . ....+ -..+++.+...+.+. +..++..++.++..++... .........+++
14091 T Consensus 163 ~~~v~~~a~~~l~~l~~~~~~---~-~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 237 (416)
14092 T 5XAH_C 163 DAMLLEHAGEAIPALAAAAGG---D-SFAPF-FAGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLP 237 (416)
14093 T ss_dssp HHHHHHHHHTHHHHHHHHHTS---T-TTHHH-HHHHHHHHHHTTSTTSCHHHHHHHHHHHHHHHHHHGGGGGGGHHHHHH
14094 T ss_pred HHHHHHHHHHHHHHHHHHhCc---c-chHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
14095 Confidence 455667778888777654210 0 01111 133556666666543 3567778888888877541 111111123566
14096
14097
14098 Q NP_000290.2 639 EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR-SSASPKAAEAARLLLSDMWSSK 715 (747)
14099 Q Consensus 639 ~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~-s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
14100 .+...+.+ .++.++..++.+|..++...+......+ ..+++.+...+. +. ++.++..++.++..++...
14101 T Consensus 238 ~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~-~~i~~~l~~~l~~~~-~~~v~~~a~~~l~~l~~~~ 307 (416)
14102 T 5XAH_C 238 VLLSTAQE------ADPEVRSNAIFGMGVLAEHGGHPAQEHF-PKLLGLLFPLLARER-HDRVRDNICGALARLLMAS 307 (416)
14103 T ss_dssp HHHHHTTC------SSHHHHHHHHHHHHHHHHHSHHHHHTTH-HHHHHHHTHHHHHCC-CHHHHHHHHHHHHHHHHTS
14104 T ss_pred HHHHHhhc------CCHHHHHHHHHHHHHHHHhcCchHHhhH-HHHHHHHHHHhccCC-CHHHHHHHHHHHHHHHHhC
14105 Confidence 66666655 3678889999999998865332222222 235666777776 44 6778888888888877543
14106
14107
14108 No 372
14109 >5FRS_A SISTER CHROMATID COHESION PROTEIN PDS5; COHESIN, DNA REPLICATION, SISTER CHROMATID; 4.073A {SACCHAROMYCES CEREVISIAE}
14110 Probab=83.54 E-value=0.08 Score=57.55 Aligned_cols=149 Identities=7% Similarity=0.080 Sum_probs=99.5 Template_Neff=9.900
14111
14112 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
14113 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
14114 +++.|...+. +.++.++..|+.+|..+....+. . .... ....+++.++..+.+.++.++..++.++..+... +
14115 T Consensus 282 vl~~L~~~l~-~~~~~vR~~A~~~L~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~d~~~~vR~~a~~~l~~~~~~~~ 355 (703)
14116 T 5FRS_A 282 VIGFIYHELS-SENELFRKEATKLIGQILTSYSD---L-NFVS-THSDTFKAWISKIADISPDVRVEWTESIPQIIATRE 355 (703)
14117 T ss_pred hHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCCCc---c-cHHH-HchhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCH
14118 Confidence 5666666676 46778899999999988764221 0 0011 1245667777777778889999999999988764 2
14119
14120
14121 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
14122 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
14123 .. ...+++.+...+.+ .++.++..|+.+|+.+..... .........++.+...+.+. +..++..|+.
14124 T Consensus 356 ~~----~~~i~~~l~~~l~D------~d~~VR~~A~~~L~~~~~~~~--~~~~~~~~~l~~l~~~l~d~-~~~VR~~A~~ 422 (703)
14125 T 5FRS_A 356 DI----SKELNQALAKTFID------SDPRVRRTSVMIFNKVPVTEI--WKNITNKAIYTSLLHLAREK-HKEVRELCIN 422 (703)
14126 T ss_pred HH----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHhhcccCc--cccCCCcccHHHHHHHhcCC-CHHHHHHHHH
14127 Confidence 11 22356666666666 478999999999998865321 00111234567777777766 7789999999
14128
14129
14130 Q NP_000290.2 707 LLSDMWSSK 715 (747)
14131 Q Consensus 707 aLsnL~~~~ 715 (747)
14132 +|..+....
14133 T Consensus 423 ~L~~l~~~~ 431 (703)
14134 T 5FRS_A 423 TMAKFYSNS 431 (703)
14135 T ss_pred HHHHHHHhC
14136 Confidence 888777543
14137
14138
14139 No 373
14140 >4HM9_A Beta-catenin-like protein 1; all alpha-helical, armadillo repeats, PROTEIN; 3.1001A {Homo sapiens}
14141 Probab=83.50 E-value=0.087 Score=56.79 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=87.4 Template_Neff=8.100
14142
14143 Q NP_000290.2 246 TIPKAVQYLSS------QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSP--NQNVQQAAAGALRNLVFR 317 (747)
14144 Q Consensus 246 iL~~Ll~lL~s------sd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~--d~eVr~~AL~aLs~La~~ 317 (747)
14145 +++.|+..+.. .+...+..++.+|.+++...+.....+...++++.|+.++... ....+..+..+|..++..
14146 T Consensus 198 ~l~~Lv~~L~~l~e~~~~d~~~~~~al~iL~nL~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~~~k~~AaeiL~~L~~~ 277 (568)
14147 T 4HM9_A 198 VVALLVQNLERLDESVKEEADGVHNTLAIVENMAEFRPEMCTEGAQQGLLQWLLKRLKAKMPFDANKLYCSEVLAILLQD 277 (568)
14148 T ss_dssp HHHHHHHHHTTCCTTSHHHHHHHHHHHHHHHHHHHHCGGGHHHHCCCCCHHHHHHHHHSSCCCCHHHHHHHHHHHHHHTT
14149 T ss_pred HHHHHHHHHhcccccccchHHHHHHHHHHHHHHhccCHHHHHHHHHCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcC
14150 Confidence 44555555554 4556778888999988865433333344456788888888764 466788889999988865
14151
14152
14153 Q NP_000290.2 318 STTNKLETRRQNGIREAVSLLRR-----TG---NAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVII 381 (747)
14154 Q Consensus 318 ~~~~~~~ll~~~IL~~Ll~lL~s-----s~---d~eVr~~AL~aLsnLas~~~~~~~Lve-giLe~Lv~LL~~ 381 (747)
14155 .......+...+.++.|+.++.. .. .......++.+|..++........++. ++++.|+.+|+.
14156 T Consensus 278 ~~~~r~~l~~~g~I~~LL~lL~~y~~~d~~~~~e~e~~en~~~aL~~L~~~~~~r~~f~~~~gv~lLv~lL~~ 350 (568)
14157 T 4HM9_A 278 NDENRELLGELDGIDVLLQQLSVFKRHNPSTAEEQEMMENLFDSLCSCLMLSSNRERFLKGEGLQLMNLMLRE 350 (568)
14158 T ss_dssp CHHHHHHHHHTTHHHHHHHHHGGGTTSCCSSSHHHHHHHHHHHHHHHHTTSTHHHHHHHHTTHHHHHHHHHHH
14159 T ss_pred CHHHHHHHHhCchHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHCChHHHHHHHHhC
14160 Confidence 44444444445677777777731 11 123444557788887766555555555 778888888875
14161
14162
14163 No 374
14164 >5FRP_A SISTER CHROMATID COHESION PROTEIN PDS5; CELL CYCLE, CELL DIVISION, COHESIN; 2.895A {SACCHAROMYCES CEREVISIAE}
14165 Probab=83.43 E-value=0.082 Score=57.48 Aligned_cols=149 Identities=7% Similarity=0.080 Sum_probs=99.6 Template_Neff=9.900
14166
14167 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
14168 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
14169 +++.|...+. +.++.++..|+.+|..+....+. . .... ....+++.++..+.+.++.++..++.++..+... +
14170 T Consensus 282 vl~~L~~~l~-~~~~~vR~~A~~~L~~l~~~~~~---~-~~~~-~~~~~~~~l~~~l~d~~~~vR~~a~~~l~~~~~~~~ 355 (703)
14171 T 5FRP_A 282 VIGFIYHELS-SENELFRKEATKLIGQILTSYSD---L-NFVS-THSDTFKAWISKIADISPDVRVEWTESIPQIIATRE 355 (703)
14172 T ss_dssp THHHHHHHHT-CSSHHHHHHHHHHHHHHTTSCCS---S-CHHH-HTHHHHHHHHGGGGCSSHHHHHHHHHTHHHHHHHCC
14173 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCCC---c-CHHH-HCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCH
14174 Confidence 5666666676 46778899999999988764221 0 0011 1245667777777778889999999999988764 2
14175
14176
14177 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
14178 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
14179 .. ...+++.+...+.+ .++.++..|+.+|+.+..... .........++.+...+.+. +..++..|+.
14180 T Consensus 356 ~~----~~~i~~~l~~~l~D------~d~~VR~~A~~~L~~~~~~~~--~~~~~~~~~l~~l~~~l~d~-~~~VR~~A~~ 422 (703)
14181 T 5FRP_A 356 DI----SKELNQALAKTFID------SDPRVRRTSVMIFNKVPVTEI--WKNITNKAIYTSLLHLAREK-HKEVRELCIN 422 (703)
14182 T ss_dssp SC----SSHHHHHHHHHTTC------SSHHHHHHHHHHHHHSCHHHH--HHHCCCHHHHHHHHHGGGBS-CHHHHHHHHH
14183 T ss_pred HH----HHHHHHHHHHHhcC------CCHHHHHHHHHHHhhcChhHH--hhcCCchHHHHHHHHHHhcC-CHHHHHHHHH
14184 Confidence 11 22356666677666 478999999999998865311 00111234567777777766 7789999999
14185
14186
14187 Q NP_000290.2 707 LLSDMWSSK 715 (747)
14188 Q Consensus 707 aLsnL~~~~ 715 (747)
14189 +|..+....
14190 T Consensus 423 ~L~~l~~~~ 431 (703)
14191 T 5FRP_A 423 TMAKFYSNS 431 (703)
14192 T ss_dssp HHHHHHHHH
14193 T ss_pred HHHHHHHHH
14194 Confidence 888777543
14195
14196
14197 No 375
14198 >5GM6_G Prp8, Brr2, Snu114, Rse1, Cus1; spliceosome, RNA splicing, Bact, Catalytically; HET: GTP, ADP, ZN; 3.5A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
14199 Probab=83.42 E-value=0.077 Score=58.66 Aligned_cols=69 Identities=9% Similarity=-0.111 Sum_probs=31.7 Template_Neff=11.400
14200
14201 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVF 316 (747)
14202 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~ 316 (747)
14203 +.+...+.+.++.++..++.++..+...............+++.+...+.+.+..++..++.++..++.
14204 T Consensus 603 ~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~v~~~a~~~l~~l~~ 671 (971)
14205 T 5GM6_G 603 STILNHLKHKTPLVRQHAADLCAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLGSIINAMYCITS 671 (971)
14206 T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
14207 Confidence 333344444455566666665555543211111100111234444444444445566666666666554
14208
14209
14210 No 376
14211 >5ZWM_1 Pre-mRNA-splicing factor 8, U4/U6 small; spliceosome, assembly, pre-B complex, U1; HET: GTP; 3.4A {Saccharomyces cerevisiae S288c}
14212 Probab=83.42 E-value=0.077 Score=58.66 Aligned_cols=69 Identities=9% Similarity=-0.111 Sum_probs=31.7 Template_Neff=11.400
14213
14214 Q NP_000290.2 248 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVF 316 (747)
14215 Q Consensus 248 ~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~ 316 (747)
14216 +.+...+.+.++.++..++.++..+...............+++.+...+.+.+..++..++.++..++.
14217 T Consensus 603 ~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~v~~~a~~~l~~l~~ 671 (971)
14218 T 5ZWM_1 603 STILNHLKHKTPLVRQHAADLCAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLGSIINAMYCITS 671 (971)
14219 T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHH
14220 T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
14221 Confidence 333344444455566666665555543211111100111234444444444445566666666666554
14222
14223
14224 No 377
14225 >3TJZ_B ADP-ribosylation factor 1, Coatomer subunit; protein trafficking, Golgi membrane, protein; HET: GNP; 2.9A {Saccharomyces cerevisiae}
14226 Probab=83.38 E-value=0.075 Score=50.15 Aligned_cols=102 Identities=16% Similarity=0.082 Sum_probs=56.5 Template_Neff=12.100
14227
14228 Q NP_000290.2 596 GLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL 675 (747)
14229 Q Consensus 596 iI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~ 675 (747)
14230 .++.+..++.+.+..++..++.+|..+...... ....+++.+..++.+ .++.++..++.+|..+....+..
14231 T Consensus 251 ~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~---~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~ 321 (355)
14232 T 3TJZ_B 251 LFDFIESCLRNKHEMVVYEAASAIVNLPGCSAK---ELAPAVSVLQLFCSS------PKAALRYAAVRTLNKVAMKHPSA 321 (355)
14233 T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHccCCHH---HHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHcCHHH
14234 Confidence 445555556555666666666666666543100 001233444444444 25667777778877776532211
14235
14236
14237 Q NP_000290.2 676 AKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
14238 Q Consensus 676 ~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
14239 . ...++.+..++.+. +..++..|+.+|..+.
14240 T Consensus 322 ~-----~~~~~~l~~~l~~~-~~~vr~~a~~~L~~l~ 352 (355)
14241 T 3TJZ_B 322 V-----TACNLDLENLVTDA-NRSIATLAITTLLKTG 352 (355)
14242 T ss_pred H-----HHHHHHHHHHhcCC-CHHHHHHHHHHHHHhh
14243 Confidence 1 12335566666655 6677888888777764
14244
14245
14246 No 378
14247 >6CRI_R Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
14248 Probab=83.30 E-value=0.075 Score=53.54 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=51.9 Template_Neff=12.500
14249
14250 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
14251 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
14252 +++.+...+.+.++.++..++..+..+.... ....+++.+...+.+.++.++..++.++..+....+...
14253 T Consensus 100 ~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~-------~~~~~~~~l~~~l~~~~~~vr~~a~~~L~~~~~~~~~~~--- 169 (585)
14254 T 6CRI_R 100 MTNCIKNDLNHSTQFVQGLALCTLGCMGSSE-------MCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELM--- 169 (585)
14255 T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhhCCHH-------HHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHCHHHH---
14256 Confidence 4444444555555566666666665554211 011234445555555556666666666666654322111
14257
14258
14259 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
14260 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
14261 ..+++.+...+. +.++.++..++.++..+..
14262 T Consensus 170 --~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~ 200 (585)
14263 T 6CRI_R 170 --EMFLPATKNLLN-EKNHGVLHTSVVLLTEMCE 200 (585)
14264 T ss_pred --HHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHH
14265 Confidence 234445555554 4455666666666666654
14266
14267
14268 No 379
14269 >6U62_A Regulatory-associated protein of mTOR, Ras-related; signaling complex, GTPase, lysosome, SIGNALING; HET: GDP, GTP;{Homo sapiens}
14270 Probab=83.02 E-value=0.095 Score=62.46 Aligned_cols=159 Identities=10% Similarity=0.013 Sum_probs=98.7 Template_Neff=8.000
14271
14272 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSN 621 (747)
14273 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsn 621 (747)
14274 ...|+++.++++|++ ...+.+...+.+...++.-+.. ....+++.+....++.+|.... +..+..++.+|+.
14275 T Consensus 468 l~~gifp~~~~ll~~-~~~~~~~~l~~iw~kil~~d~~-----~~~~l~~~~~~~~f~~~l~~~~~~~~~~~~~afiLa~ 541 (1392)
14276 T 6U62_A 468 LSVGIFPYVLKLLQS-SARELRPLLVFIWAKILAVDSS-----CQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILAV 541 (1392)
14277 T ss_dssp HHHTCHHHHHHGGGC-CCSTTHHHHHHHHHHHHTTCGG-----GHHHHHHTTTHHHHHHHHHSTTSCSSSHHHHHHHHHH
14278 T ss_pred HHcCcHHHHHHHHHc-cchhhHHHHHHHHHHHHhhCch-----hHHHHHhccchHHHHHhhcCCCCChhHHHHHHHHHHH
14279 Confidence 466778888888873 4445554445555555443221 1222234444555666665432 2244566667777
14280
14281
14282 Q NP_000290.2 622 MSRH-PLLH-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPK 699 (747)
14283 Q Consensus 622 La~~-~e~~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~e 699 (747)
14284 ++.. .... .....+++..+...|.. .++.++..++-+|+.|....+..+...+..+....|..++.+. .++
14285 T Consensus 542 ~~~~~~~~q~~~~~~~~~~~~~~~l~~------~~~~~r~W~~l~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~d~-~pe 614 (1392)
14286 T 6U62_A 542 IVNSYHTGQEACLQGNLIAICLEQLND------PHPLLRQWVAICLGRIWQNFDSARWCGVRDSAHEKLYSLLSDP-IPE 614 (1392)
14287 T ss_dssp HSTTCHHHHHHHHHTTHHHHHHTSTTC------SCHHHHHHHHHHHHHHSSSCHHHHHHHHTTTHHHHSGGGGGCS-STT
14288 T ss_pred HHhhCcchHHHHHhchHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCHHHHHHhhcccHHHHHHHHhcCC-CHH
14289 Confidence 7754 2222 22233455666666654 3688899999999999876555555555555667788888877 899
14290
14291
14292 Q NP_000290.2 700 AAEAARLLLSDMWSSK 715 (747)
14293 Q Consensus 700 Vr~aAL~aLsnL~~~~ 715 (747)
14294 ||.+|+.+|+.++...
14295 T Consensus 615 VRaaav~aL~~~i~~~ 630 (1392)
14296 T 6U62_A 615 VRCAAVFALGTFVGNS 630 (1392)
14297 T ss_dssp HHHHHHHHHHHHSCCT
14298 T ss_pred HHHHHHHHHHHhhCCC
14299 Confidence 9999999998887553
14300
14301
14302 No 380
14303 >6BCX_W mTOR, Target of rapamycin complex; PIKK, TRANSFERASE; HET: ATP; 3.0A {Homo sapiens}
14304 Probab=82.82 E-value=0.098 Score=62.11 Aligned_cols=159 Identities=10% Similarity=0.013 Sum_probs=98.0 Template_Neff=7.900
14305
14306 Q NP_000290.2 544 YHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSN 621 (747)
14307 Q Consensus 544 ve~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsn 621 (747)
14308 ...|+++.++++|++ ...+.+...+.+...++.-+.. ....+++.+....++.+|.... +..+..++.+|+.
14309 T Consensus 476 l~~gifp~~~~ll~~-~~~~~~~~l~~iw~kil~~d~~-----~~~~l~~~~~~~~f~~~l~~~~~~~~~~~~~a~iLa~ 549 (1343)
14310 T 6BCX_W 476 LSVGIFPYVLKLLQS-SARELRPLLVFIWAKILAVDSS-----CQADLVKDNGHKYFLSVLADPYMPAEHRTMTAFILAV 549 (1343)
14311 T ss_dssp HHHTCHHHHHHGGGC-CCGGGHHHHHHHHHHHHHHCGG-----GHHHHHHTTHHHHHHHHHTCTTSCHHHHHHHHHHHHH
14312 T ss_pred HHcCcHHHHHHHHHc-cchhhHHHHHHHHHHHHhhCcc-----hHHHHHhccchhHHHHhhcCCCCChhHHHHHHHHHHH
14313 Confidence 356778888888873 4444544444455555443221 1222234444555666665432 2234566667777
14314
14315
14316 Q NP_000290.2 622 MSRH-PLLH-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPK 699 (747)
14317 Q Consensus 622 La~~-~e~~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~e 699 (747)
14318 ++.. .... .....+++..+...|.. .++.++..++-+|+.|....+..+...+..+....+..++.+. .++
14319 T Consensus 550 ~~~~~~~~q~~~~~~~~~~~~~~~l~~------~~~~~r~W~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~d~-~pe 622 (1343)
14320 T 6BCX_W 550 IVNSYHTGQEACLQGNLIAICLEQLND------PHPLLRQWVAICLGRIWQNFDSARWCGVRDSAHEKLYSLLSDP-IPE 622 (1343)
14321 T ss_dssp HSTTCHHHHHHHHHTTHHHHHHHTTTC------SCHHHHHHHHHHHHHHTTTCHHHHHHHHHHTHHHHHGGGGGCS-SHH
14322 T ss_pred HHhhCchhHHHHHhchHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCHHHHHHhhcccHHHHHHHHhcCC-CHH
14323 Confidence 7654 2222 22333456666666654 3688899999999999876555555555555667788888877 899
14324
14325
14326 Q NP_000290.2 700 AAEAARLLLSDMWSSK 715 (747)
14327 Q Consensus 700 Vr~aAL~aLsnL~~~~ 715 (747)
14328 ||.+++.+|+.++...
14329 T Consensus 623 vRaa~v~aL~~~i~~~ 638 (1343)
14330 T 6BCX_W 623 VRCAAVFALGTFVGNS 638 (1343)
14331 T ss_dssp HHHHHHHHHHHHHTTC
14332 T ss_pred HHHHHHHHHHHhhCCC
14333 Confidence 9999999998887653
14334
14335
14336 No 381
14337 >4QMH_A LP04448p; PROTEIN BINDING, TOG DOMAIN; 1.652A {Drosophila melanogaster}
14338 Probab=82.76 E-value=0.081 Score=45.96 Aligned_cols=114 Identities=8% Similarity=0.065 Sum_probs=67.9 Template_Neff=12.700
14339
14340 Q NP_000290.2 595 KGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ 674 (747)
14341 Q Consensus 595 giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e 674 (747)
14342 .+++.+...+.+.++.++..++.+|..+.............+++.+...+.+ .++.++..++.++..++.....
14343 T Consensus 17 ~l~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~d------~~~~v~~~a~~~l~~l~~~~~~ 90 (241)
14344 T 4QMH_A 17 QITEALLKEMSDKDWKTRNEGLTKLQAIISEARLIKPSIGDLAPALAHRLVD------SNAKIAQTTLAICEQLATAMGA 90 (241)
14345 T ss_dssp GSCHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCSBCSCCTTHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHHGG
14346 T ss_pred HhhHHHHHhcCCccHHHHHHHHHHHHHHHHhCCcCcccHHHHHHHHHHHHcC------CCHHHHHHHHHHHHHHHHHhcH
14347 Confidence 3455566666677778888888888888764211110112345555666655 3678888888888888764322
14348
14349
14350 Q NP_000290.2 675 LAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
14351 Q Consensus 675 ~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
14352 ...... ..+++.+...+.+. +..++..++.+|..+.....
14353 T Consensus 91 ~~~~~~-~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~~~ 130 (241)
14354 T 4QMH_A 91 GCRNHV-RNLFPGFLHALGDN-KSFVRAAALNCINSFGEKGG 130 (241)
14355 T ss_dssp GGGGGH-HHHHHHHHHHTTCS-SHHHHHHHHHHHHHHHHHHC
14356 T ss_pred HHHHHH-HHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHhcC
14357 Confidence 111111 23455666666554 55677777777777665443
14358
14359
14360 No 382
14361 >6QH5_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
14362 Probab=82.76 E-value=0.083 Score=54.05 Aligned_cols=140 Identities=15% Similarity=0.148 Sum_probs=92.9 Template_Neff=12.200
14363
14364 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14365 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14366 .++.++..+. +.+..++..++.++..+...... . ...+++.+...+.+.++.++..++.+|..+.....
14367 T Consensus 75 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~~ 143 (621)
14368 T 6QH5_A 75 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE--------L--IRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 143 (621)
14369 T ss_pred hHHHHHHHhc-CCCHHHHHHHHHHHHHHhhcCHH--------H--HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCHHH
14370 Confidence 4556667776 46677888888888887653221 1 12355666777777788899999999888764311
14371
14372
14373 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
14374 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
14375 ...+++.+...+ .+ .++.++..++.+|..+....+.. +.....++.+..++.+. ++.++..++
14376 T Consensus 144 -----~~~l~~~l~~~l~~~~------~~~~vr~~a~~~L~~l~~~~~~~---~~~~~~~~~l~~~l~~~-~~~vr~~a~ 208 (621)
14377 T 6QH5_A 144 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLLNDQ-HLGVVTAAT 208 (621)
14378 T ss_pred -----HHHHHHHHHHHhcCCC------CCHHHHHHHHHHHHHHHHhChHH---ccHHHHHHHHHHHhcCC-CHHHHHHHH
14379 Confidence 112445555666 44 36788999999999887642221 11234567777777766 778888888
14380
14381
14382 Q NP_000290.2 706 LLLSDMWS 713 (747)
14383 Q Consensus 706 ~aLsnL~~ 713 (747)
14384 .+|..+..
14385 T Consensus 209 ~~L~~l~~ 216 (621)
14386 T 6QH5_A 209 SLITTLAQ 216 (621)
14387 T ss_pred HHHHHHHH
14388 Confidence 88888775
14389
14390
14391 No 383
14392 >6EMK_C Serine/threonine-protein kinase TOR2 (E.C.2.7.1.67,2.7.11.1), Target; target of rapamycin, torc2, FRB; 8.0A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
14393 Probab=82.75 E-value=0.086 Score=64.86 Aligned_cols=71 Identities=13% Similarity=0.124 Sum_probs=44.6 Template_Neff=11.300
14394
14395 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLE-ACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
14396 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~-~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
14397 +++.|+..+. +.+..++. .++.+|..++..... ....+ -..+++.+...+.+.+..++..++.+|..++..
14398 T Consensus 922 ~~~~L~~~l~-d~~~~v~~~~a~~~L~~i~~~~~~-----~~~~~-l~~l~~~l~~~l~~~~~~vr~~~~~~L~~l~~~ 993 (2474)
14399 T 6EMK_C 922 VIHNLMKILN-DPSLSIHHTAAIQAIMHIFQNLGL-----RCVSF-LDQIIPGIILVMRSCPPSQLDFYFQQLGSLISI 993 (2474)
14400 T ss_dssp TTCCCCCCTT-CCCCCCCCCCCTTTCCCCCCCCCC-----CCCCC-SSTTCCCCCCCCCCCCHHHHCCCCCCTTTCCCC
14401 T ss_pred HHHHHHHHHc-CCchHHHHHHHHHHHHHHHHHcch-----hhHHh-HhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
14402 Confidence 4566667776 34555555 778888887764221 01111 134566677777666677888888888888764
14403
14404
14405 No 384
14406 >5MU7_A Coatomer subunit beta, Coatomer subunit; coatomer, COPI, beta COP, delta; 2.57A {Chaetomium thermophilum var. thermophilum DSM 1495}
14407 Probab=82.68 E-value=0.082 Score=49.28 Aligned_cols=71 Identities=11% Similarity=-0.055 Sum_probs=38.3 Template_Neff=12.800
14408
14409 Q NP_000290.2 548 AIRTYLNLM-GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
14410 Q Consensus 548 ~I~~LL~LL-~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
14411 .++.++..+ . ++++.++..++.+|..+...... . .... .....++.+...+.+.++.++..++.+|..+..
14412 T Consensus 39 ~~~~l~~~l~~-~~~~~~r~~a~~~l~~~~~~~~~---~-~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~ 110 (373)
14413 T 5MU7_A 39 LLMHIIRFVMP-SKSKPLKKLLYFYYEICPKLDSQ---G-KLKQ-EFILVCNGIRNDLQHPNEYIRGNTLRFLCKLRE 110 (373)
14414 T ss_dssp GHHHHHHHTTT-CCCHHHHHHHHHHHHHSCCBCTT---S-CBCT-HHHHHHHHHHHHTTCSSHHHHHHHHHHHTTCCC
14415 T ss_pred HHHHHHHHHcC-CCChhhHHHHHHHHHhccccCCc---c-hHHH-HHHHHHHHHHHHccCCCHHHHHHHHHHHHhccC
14416 Confidence 345555553 4 35666777777777776542111 0 0000 012345556666666666777777777766543
14417
14418
14419 No 385
14420 >6CRI_I Bone marrow stromal antigen 2,Nef; AP, HIV, Nef, trafficking, VIRAL; HET: GTP;{Homo sapiens}
14421 Probab=82.65 E-value=0.081 Score=52.06 Aligned_cols=145 Identities=12% Similarity=0.047 Sum_probs=93.3 Template_Neff=13.200
14422
14423 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
14424 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
14425 .++.+...+. +.++.++..++.+|..+...... .....++++.+...+.+.++.++..++.+|..+....
14426 T Consensus 109 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~ 179 (570)
14427 T 6CRI_I 109 LCEPLRKCLK-DEDPYVRKTAAVCVAKLHDINAQ--------LVEDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHP 179 (570)
14428 T ss_dssp SHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHCHH--------HHHHHTHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHTT
14429 T ss_pred HHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhChh--------hhhccchHHHHHHHhcCCCHHHHHHHHHHHHHHHhhCC
14430 Confidence 4556667776 46778888999999988764321 1112456778888888888899999999999888652
14431
14432
14433 Q NP_000290.2 627 L-LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
14434 Q Consensus 627 e-~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
14435 . ........+++.+...+.+ .++.++..++.+|..+....... ....++.+...+.+. ++.++..++
14436 T Consensus 180 ~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~l~~~l~~~-~~~vr~~a~ 247 (570)
14437 T 6CRI_I 180 SSNLLDLNPQSINKLLTALNE------CTEWGQIFILDCLANYMPKDDRE-----AQSICERVTPRLSHA-NSAVVLSAV 247 (570)
14438 T ss_dssp STTCCCCCHHHHHHHHHHHTT------SCHHHHHHHHHHTTTCCCSSHHH-----HHHHHHHHGGGGGBS-CHHHHHHHH
14439 T ss_pred CcchhccCHHHHHHHHHHhhc------CCHHHHHHHHHHHHHhCCCCHHH-----HHHHHHHHHHHhcCC-CHHHHHHHH
14440 Confidence 1 1111112355555555554 25677778888888877542211 112455556666655 677788888
14441
14442
14443 Q NP_000290.2 706 LLLSDMWS 713 (747)
14444 Q Consensus 706 ~aLsnL~~ 713 (747)
14445 .++..+..
14446 T Consensus 248 ~~l~~l~~ 255 (570)
14447 T 6CRI_I 248 KVLMKFME 255 (570)
14448 T ss_dssp HHHHHHTT
14449 T ss_pred HHHHHHHH
14450 Confidence 87777764
14451
14452
14453 No 386
14454 >4QMI_B Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG domain; 1.9A {Homo sapiens}
14455 Probab=82.55 E-value=0.084 Score=45.96 Aligned_cols=112 Identities=11% Similarity=0.091 Sum_probs=68.9 Template_Neff=12.600
14456
14457 Q NP_000290.2 595 KGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP 673 (747)
14458 Q Consensus 595 giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~ 673 (747)
14459 .+++.+...+.+.++.++..++.++..+...... ...+ ..+++.+...+.+ .++.++..++.++..++...+
14460 T Consensus 19 ~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~-~~~~~~l~~~l~d------~~~~vr~~a~~~l~~l~~~~~ 91 (240)
14461 T 4QMI_B 19 KITSELVSKIGDKNWKIRKEGLDEVAGIINDAKFIQPNI-GELPTALKGRLND------SNKILVQQTLNILQQLAVAMG 91 (240)
14462 T ss_dssp GSCHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCSBCSCC-TTHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHHG
14463 T ss_pred hccHHHHHHhcCCCHHHHHHHHHHHHHHHcCchHhccch-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhc
14464 Confidence 3455666667777788888888888888765211 1111 2345556666655 367888888888888876532
14465
14466
14467 Q NP_000290.2 674 QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
14468 Q Consensus 674 e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
14469 ....... ...++.++..+.+. +..++..++.++..+....
14470 T Consensus 92 ~~~~~~~-~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~~ 131 (240)
14471 T 4QMI_B 92 PNIKQHV-KNLGIPIITVLGDS-KNNVRAAALATVNAWAEQT 131 (240)
14472 T ss_dssp GGGGGGC-CCCCHHHHHHTTCS-SHHHHHHHHHHHHHHHHHH
14473 T ss_pred HHHHHHH-HHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHh
14474 Confidence 2111111 23456666666655 5667777777777776553
14475
14476
14477 No 387
14478 >4QMJ_A Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG DOMAIN; 2.498A {Homo sapiens}
14479 Probab=82.55 E-value=0.084 Score=45.96 Aligned_cols=112 Identities=11% Similarity=0.091 Sum_probs=68.9 Template_Neff=12.600
14480
14481 Q NP_000290.2 595 KGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP 673 (747)
14482 Q Consensus 595 giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~ 673 (747)
14483 .+++.+...+.+.++.++..++.++..+...... ...+ ..+++.+...+.+ .++.++..++.++..++...+
14484 T Consensus 19 ~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~-~~~~~~l~~~l~d------~~~~vr~~a~~~l~~l~~~~~ 91 (240)
14485 T 4QMJ_A 19 KITSELVSKIGDKNWKIRKEGLDEVAGIINDAKFIQPNI-GELPTALKGRLND------SNKILVQQTLNILQQLAVAMG 91 (240)
14486 T ss_dssp TSCHHHHHHHTCSSHHHHHHHHHHHHHHHHHHSSBCSCC-TTHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHHG
14487 T ss_pred hccHHHHHHhcCCCHHHHHHHHHHHHHHHcCchHhccch-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhc
14488 Confidence 3455666667777788888888888888765211 1111 2345556666655 367888888888888876532
14489
14490
14491 Q NP_000290.2 674 QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
14492 Q Consensus 674 e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
14493 ....... ...++.++..+.+. +..++..++.++..+....
14494 T Consensus 92 ~~~~~~~-~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~~ 131 (240)
14495 T 4QMJ_A 92 PNIKQHV-KNLGIPIITVLGDS-KNNVRAAALATVNAWAEQT 131 (240)
14496 T ss_dssp GGGGGGC-CCCCHHHHHGGGCS-SHHHHHHHHHHHHHHHHHH
14497 T ss_pred HHHHHHH-HHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHh
14498 Confidence 2111111 23456666666655 5667777777777776553
14499
14500
14501 No 388
14502 >6MZG_E Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: GTP, GDP; 3.208A {Sus scrofa}
14503 Probab=82.53 E-value=0.084 Score=52.43 Aligned_cols=147 Identities=12% Similarity=0.077 Sum_probs=92.8 Template_Neff=12.700
14504
14505 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQ--LIGLKEKGLPQIARLL-QSGNSDVVRSGASLLSNMSRH 625 (747)
14506 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~--~llie~giI~~Ll~LL-~s~d~eVr~~AL~aLsnLa~~ 625 (747)
14507 ++.+...+. +.++.++..++..|..++..... . .. .. .-..+++.+...+ .+.++.++..++.++..++..
14508 T Consensus 315 ~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~---~-~~~~~~-~~~~i~~~l~~~l~~d~~~~v~~~a~~~l~~l~~~ 388 (554)
14509 T 6MZG_E 315 PADFQTRIS-STKWKDRVEALEEIHNNVLKPVK---K-LAHKNQ-DYSDYLRVLANVIQKDANVQAVTIAANSVQLLCNS 388 (554)
14510 T ss_dssp CSTTTTTTT-CSCHHHHHHHHHHCCCCCCTTCS---C-BCCSSC-CTHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHH
14511 T ss_pred CHHHHHHhc-CCCHHHHHHHHHHHHHhhhcchh---H-HhccCC-cHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHH
14512 Confidence 344666666 46677888899999888764221 0 00 01 1135677777777 777888999999999988865
14513
14514
14515 Q NP_000290.2 626 P-LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
14516 Q Consensus 626 ~-e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
14517 . .. .......+++.+...+.+ .+..++..++.+|..++.... ...+++.+...+.+. ++.++..
14518 T Consensus 389 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~l~~~~~-------~~~~~~~l~~~l~~~-~~~vr~~ 454 (554)
14519 T 6MZG_E 389 LRSNFTRSYGAIVLVPLLERTKE------KKPSVNEAICSALDAVATYCG-------FDDCLEETLNYMKHK-TPQVRIE 454 (554)
14520 T ss_dssp STTCCSSHHHHHHHHHHHHGGGC------CCHHHHHHHHHHHHHHHTTSS-------SSSHHHHHHHHHTCS-CHHHHHH
14521 T ss_pred hhccccHHHHHhhHHHHHHHhhh------ccHHHHHHHHHHHHHHHHHcC-------HHHHHHHHHHHhcCC-CHHHHHH
14522 Confidence 1 11 101112356666666655 256788888888888876421 123455666666554 6778888
14523
14524
14525 Q NP_000290.2 704 ARLLLSDMWSSK 715 (747)
14526 Q Consensus 704 AL~aLsnL~~~~ 715 (747)
14527 ++.+|..++...
14528 T Consensus 455 ~~~~l~~l~~~~ 466 (554)
14529 T 6MZG_E 455 CTKFLTRMLQGW 466 (554)
14530 T ss_dssp HHHHHHHHHHTC
14531 T ss_pred HHHHHHHHHccC
14532 Confidence 888888776543
14533
14534
14535 No 389
14536 >1B3U_A PROTEIN PHOSPHATASE PP2A, 65 KD; SCAFFOLD PROTEIN, PP2A, PHOSPHORYLATION, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.2
14537 Probab=82.32 E-value=0.085 Score=51.84 Aligned_cols=147 Identities=13% Similarity=0.119 Sum_probs=94.4 Template_Neff=13.400
14538
14539 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
14540 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
14541 ..++.+...+. +.++.++..++.+|..+...... .. ....+++.+...+.+.++.++..++.++..+....
14542 T Consensus 164 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-------~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~ 234 (588)
14543 T 1B3U_A 164 ELRQYFRNLCS-DDTPMVRRAAASKLGEFAKVLEL-------DN-VKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLL 234 (588)
14544 T ss_dssp HHHHHHHHHHT-CSCHHHHHHHHHHHHHHHHTSCH-------HH-CCCCCHHHHHHHHTCSCHHHHTTHHHHHHHHHHHS
14545 T ss_pred HHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHcCh-------hh-hhhhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHhC
14546 Confidence 35566667776 46778888898888888763221 11 12456677777777778888999999888887641
14547
14548
14549 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
14550 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
14551 ... .....+++.+..++.+ .++.++..++.++..+....+. .......++.+...+.+. ++.++..++.
14552 T Consensus 235 ~~~-~~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~~~~~~~~---~~~~~~~~~~l~~~l~~~-~~~~r~~a~~ 303 (588)
14553 T 1B3U_A 235 PQE-DLEALVMPTLRQAAED------KSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDC-EAEVRAAASH 303 (588)
14554 T ss_dssp CHH-HHHHHTHHHHHHHHTC------SSHHHHHHHHHTHHHHHHHHCH---HHCCCCCHHHHHHHHTCS-SHHHHHHHHH
14555 T ss_pred CHH-HHHHHHHHHHHHHHhC------CCHHHHHHHHhhHHHHHHHHCC---CCCHHhHHHHHHHHhccC-HHHHHHHHHH
14556 Confidence 111 1112345556666655 3677888888888888754221 111224566666666655 6778888888
14557
14558
14559 Q NP_000290.2 707 LLSDMWS 713 (747)
14560 Q Consensus 707 aLsnL~~ 713 (747)
14561 ++..+..
14562 T Consensus 304 ~l~~l~~ 310 (588)
14563 T 1B3U_A 304 KVKEFCE 310 (588)
14564 T ss_dssp HHHHHHH
14565 T ss_pred HHHHHHH
14566 Confidence 8877765
14567
14568
14569 No 390
14570 >2OF3_A ZYG-9; Multifunctional macromolecule, Kinetochore, microtubule, XMAP215; 1.9A {Caenorhabditis elegans}
14571 Probab=81.96 E-value=0.098 Score=48.11 Aligned_cols=150 Identities=9% Similarity=-0.036 Sum_probs=91.9 Template_Neff=11.200
14572
14573 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14574 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14575 .++.+...+. +.++.++..++.++..++..... .........-..+++.++..+.+.+..++..+..+|..+.....
14576 T Consensus 88 l~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~--~~~~~~~~~~~~ll~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 164 (266)
14577 T 2OF3_A 88 LLKWCTLRFF-ETNPAALIKVLELCKVIVELIRD--TETPMSQEEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVG 164 (266)
14578 T ss_dssp HHHHHHHHTT-SCCHHHHHHHHHHHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHC
14579 T ss_pred HHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHHh--CCCCCCHHHHHhHHHHHHHHhCCCcHHHHHHHHHHHHHHHHhhC
14580 Confidence 3455555666 46677888888888888764221 00000000013456677777777777788888888887765421
14581
14582
14583 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
14584 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
14585 . ..+++.+...+.+ .++.++..++.+|..+........... ..+++.+...+.+. ++.++..++.+
14586 T Consensus 165 ~-----~~~~~~l~~~l~~------~~~~~r~~~l~~l~~~~~~~~~~~~~~--~~ii~~l~~~l~d~-~~~VR~~a~~~ 230 (266)
14587 T 2OF3_A 165 P-----LKMTPMLLDALKS------KNARQRSECLLVIEYYITNAGISPLKS--LSVEKTVAPFVGDK-DVNVRNAAINV 230 (266)
14588 T ss_dssp H-----HHHHHHHHHGGGC------SCHHHHHHHHHHHHHHHHHHCSGGGGG--GCHHHHHGGGGGCS-SHHHHHHHHHH
14589 T ss_pred H-----HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhCCccccc--ChHHHHHHHHHcCC-CHHHHHHHHHH
14590 Confidence 1 1234445555544 357778888888888775432211111 34667777777766 78899999999
14591
14592
14593 Q NP_000290.2 708 LSDMWSS 714 (747)
14594 Q Consensus 708 LsnL~~~ 714 (747)
14595 +..+...
14596 T Consensus 231 l~~l~~~ 237 (266)
14597 T 2OF3_A 231 LVACFKF 237 (266)
14598 T ss_dssp HHHHHHH
14599 T ss_pred HHHHHHH
14600 Confidence 8888754
14601
14602
14603 No 391
14604 >4I5L_D PP2A A alpha subunit (9-589); EF Hand, Phosphatase, CDC6 (Substrate); HET: FGA, ACB, DAL, MLI, PEG, 1ZN, MAA; 2.43A {Microcystis aeruginosa}
14605 Probab=81.77 E-value=0.092 Score=51.50 Aligned_cols=147 Identities=13% Similarity=0.130 Sum_probs=94.5 Template_Neff=13.400
14606
14607 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
14608 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
14609 .+++.+...+. +.++.++..++.+|..+...... . . ....+++.+...+.+.++.++..++.++..+....
14610 T Consensus 160 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~ 230 (584)
14611 T 4I5L_D 160 ELRQYFRNLCS-DDTPMVRRAAASKLGEFAKVLEL------D-N-VKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLL 230 (584)
14612 T ss_dssp HHHHHHHHHHT-CSSHHHHHHHHHHHHHHHTTSCH------H-H-CCCCCHHHHHHHTTCSCHHHHTTHHHHHHHHHHHS
14613 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHcCh------h-h-hhcchHHHHHHHhCCCCHHHHHHHHHHHHHHHHhC
14614 Confidence 34566667776 46778888899888888764221 1 1 12456677777787778888999999988887641
14615
14616
14617 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
14618 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
14619 ... .....+++.+..++.+ .++.++..++.++..+....+. .......++.+...+.+. ++.++..++.
14620 T Consensus 231 ~~~-~~~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~ 299 (584)
14621 T 4I5L_D 231 PQE-DLEALVMPTLRQAAED------KSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDC-EAEVRAAASH 299 (584)
14622 T ss_dssp CTT-THHHHTHHHHHHHHTC------SSHHHHHHHHHTHHHHHHHHHH---HHCCCCCHHHHHHHHTCS-SHHHHHHHHT
14623 T ss_pred CHH-HHHHHHHHHHHHHhhC------CCHHHHHHHHHHHHHHHHHHCC---CCChhhHHHHHHHHhcCC-cHHHHHHHHH
14624 Confidence 111 1112345556666655 3677888888888888754221 111224566666666655 6778888888
14625
14626
14627 Q NP_000290.2 707 LLSDMWS 713 (747)
14628 Q Consensus 707 aLsnL~~ 713 (747)
14629 ++..+..
14630 T Consensus 300 ~l~~l~~ 306 (584)
14631 T 4I5L_D 300 KVKEFCE 306 (584)
14632 T ss_dssp THHHHHH
14633 T ss_pred HHHHHHH
14634 Confidence 8887765
14635
14636
14637 No 392
14638 >4Y5J_A Mini spindles TOG3; XMAP215, TOG, microtubule polymerization; 2.303A {Drosophila melanogaster}
14639 Probab=81.72 E-value=0.097 Score=46.19 Aligned_cols=71 Identities=13% Similarity=0.043 Sum_probs=45.8 Template_Neff=12.300
14640
14641 Q NP_000290.2 548 AIRT-YLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIA---RLLQSGNSDVVRSGASLLSNMS 623 (747)
14642 Q Consensus 548 ~I~~-LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll---~LL~s~d~eVr~~AL~aLsnLa 623 (747)
14643 .++. ++..+. +.++.++..++..|..++..... .... ....+++.+. ..+.+.++.++..++.++..++
14644 T Consensus 15 ~l~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~~~~-----~~~~-~~~~l~~~l~~l~~~l~d~~~~v~~~a~~~l~~l~ 87 (248)
14645 T 4Y5J_A 15 ILPAEILNGLV-DSNWKNRLAAVEQLLGEISGFDA-----KQAG-ISQILIRTISGRKPGLKEMNFQVLKFKLDIIRSVA 87 (248)
14646 T ss_dssp CCCHHHHHHHH-CSSHHHHHHHHHHHHHHGGGSCT-----TSTT-HHHHHHHHHHSSSSGGGCSSHHHHHHHHHHHHHHH
14647 T ss_pred hcCHHHHHhhc-CcCHHHHHHHHHHHHHHHccCch-----hccc-hHHHHHHHHhcCCCchhhccHHHHHHHHHHHHHHH
14648 Confidence 4555 777776 46778888899999888764221 0111 1123444444 5666667788888888888887
14649
14650
14651 Q NP_000290.2 624 RH 625 (747)
14652 Q Consensus 624 ~~ 625 (747)
14653 ..
14654 T Consensus 88 ~~ 89 (248)
14655 T 4Y5J_A 88 EN 89 (248)
14656 T ss_dssp HH
14657 T ss_pred Hh
14658 Confidence 54
14659
14660
14661 No 393
14662 >4P6Z_G BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
14663 Probab=81.57 E-value=0.1 Score=53.70 Aligned_cols=137 Identities=17% Similarity=0.119 Sum_probs=87.9 Template_Neff=12.000
14664
14665 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL 628 (747)
14666 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~ 628 (747)
14667 +..++.++. +.+..++..++.+|..+....+. . ...+++.+...+.+.++.++..++.+|..+.....
14668 T Consensus 81 ~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~- 148 (627)
14669 T 4P6Z_G 81 QLECLKLIA-SQKFTDKRIGYLGAMLLLDERQD--------V--HLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEM- 148 (627)
14670 T ss_dssp HHHHHHHHT-SSSHHHHHHHHHHHHHHCCTTSC--------C--HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHCCHHH-
14671 T ss_pred HHHHHHHHc-CCCCchhHHHHHHHHHHCCCChH--------H--HHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCCHHH-
14672 Confidence 344556666 46677777888888777653221 1 12345566666777778888888888887764211
14673
14674
14675 Q NP_000290.2 629 HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLL 708 (747)
14676 Q Consensus 629 ~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aL 708 (747)
14677 ...+++.+..++.+ .++.++..++.+|..+....+... ..+++.|...+.+. ++.++..++.++
14678 T Consensus 149 ----~~~~~~~l~~~l~~------~~~~vr~~a~~~L~~l~~~~~~~~-----~~~~~~l~~~l~~~-~~~vr~~a~~~l 212 (627)
14679 T 4P6Z_G 149 ----CRDLAGEVEKLLKT------SNSYLRKKAALCAVHVIRKVPELM-----EMFLPATKNLLNEK-NHGVLHTSVVLL 212 (627)
14680 T ss_dssp ----HHHHHHHHHHHHTC------SCHHHHHHHHHHHHHHHHHCSGGG-----GGGHHHHTTCTTCC-CHHHHHHHHHHH
14681 T ss_pred ----HHHHHHHHHHHhhC------CCHHHHHHHHHHHHHHHHHCHHHH-----HHHHHHHHHHHhCC-CHHHHHHHHHHH
14682 Confidence 12345666666665 367888889999988876433221 24566677777655 677888888888
14683
14684
14685 Q NP_000290.2 709 SDMWS 713 (747)
14686 Q Consensus 709 snL~~ 713 (747)
14687 ..+..
14688 T Consensus 213 ~~~~~ 217 (627)
14689 T 4P6Z_G 213 TEMCE 217 (627)
14690 T ss_dssp HHHHH
14691 T ss_pred HHHHH
14692 Confidence 77754
14693
14694
14695 No 394
14696 >5KC2_B Phosphatidylinositol 3-kinase VPS34 (E.C.2.7.1.137), Serine/threonine-protein; autophagy, phosphatidylinositol 3-kinase (PtdIns3K), endocytosis; 28.0A {Saccharomyces cerevisiae}
14697 Probab=81.46 E-value=0.11 Score=61.49 Aligned_cols=126 Identities=13% Similarity=0.064 Sum_probs=72.5 Template_Neff=9.500
14698
14699 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
14700 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
14701 ++.|..++.+.++.++..++.+|..+.... ....+.. ..++.|+.++.+.++.++..++.+|..+..........+.
14702 T Consensus 621 l~~L~~~l~d~~~~vR~~a~~al~~l~~~~--~~~~~~~-~~lp~L~~lL~d~~~~vr~~al~aL~~L~~~~~~~~~~~~ 697 (1454)
14703 T 5KC2_B 621 LSHLITYLNDKDPALRVSLIQTISGISILL--GTVTLEQ-YILPLLIQTITDSEELVVISVLQSLKSLFKTGLIRKKYYI 697 (1454)
14704 T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhh--HHHHHHH-cCHHHHHHHhcCCCHHHHHHHHHHHHHHhhCCHHHHHHHH
14705 Confidence 444555555566667777777776666432 1112222 2266777777776777788888888877653322222221
14706
14707
14708 Q NP_000290.2 327 RQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRV 379 (747)
14709 Q Consensus 327 ~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~~~~~~~LvegiLe~Lv~LL 379 (747)
14710 ..++.+..++. +.++.++..+..+|..|+...... .....+++.|+.+|
14711 T Consensus 698 --~~l~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~~-~~~~~~~~~L~~~L 746 (1454)
14712 T 5KC2_B 698 --DISKTTSPLLL-HPNNWIRQFTLMIIIEIINKLSKA-EVYCILYPIIRPFF 746 (1454)
14713 T ss_pred --HHHHHHHHHHC-CCCHHHHHHHHHHHHHHhcCCCCH-HHHcChHHHHHHHh
14714 Confidence 25556666665 457778888888888877643221 11134555555555
14715
14716
14717 No 395
14718 >6MZG_E Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: GTP, GDP; 3.208A {Sus scrofa}
14719 Probab=81.15 E-value=0.1 Score=51.71 Aligned_cols=151 Identities=11% Similarity=0.102 Sum_probs=93.6 Template_Neff=12.700
14720
14721 Q NP_000290.2 550 RTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIAR-LLQSGNSDVVRSGASLLSNMSRHPLL 628 (747)
14722 Q Consensus 550 ~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~-LL~s~d~eVr~~AL~aLsnLa~~~e~ 628 (747)
14723 +.+...+. +.++.++..++.+|..++..... ........ ....+++.++. ++.+.++.++..++.+|..++.....
14724 T Consensus 57 ~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-~~~~~~~~-~~~~~l~~l~~~~~~~~~~~vr~~a~~~L~~l~~~~~~ 133 (554)
14725 T 6MZG_E 57 ELFASYIV-DSNVVAQENAIIALHTLLEYISQ-VPNVSTSK-LRLQWIPPLVEKGLSSSRAATKAKATDCIMLLTQSDTS 133 (554)
14726 T ss_dssp HHHHHHTT-CSSHHHHHHHHHHHHHHHHHTCS-SSCCTHHH-HHHHHHHHHCCCCCSCSCHHHHHHHHHHHHHHHHTSSS
14727 T ss_pred HHHHHhcC-CccHHHHHHHHHHHHHHHHHHhc-CCCCCcHH-HHHhcHHHHHHHhccCCcHHHHHHHHHHHHHHHhcccc
14728 Confidence 55666776 47788899999999988764221 00000001 11345666666 45666788889999999888754111
14729
14730
14731 Q NP_000290.2 629 HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK---QYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
14732 Q Consensus 629 ~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~---~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
14733 ...+++.+...+.+ .++.++..++.+|..++........ ......+++.+...+.+. ++.++..++
14734 T Consensus 134 ----~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~-~~~vr~~a~ 202 (554)
14735 T 6MZG_E 134 ----IQQTVNLMLPSLSN------KLPRLVSSCVKCLATIIEEFGFINVSDINILLSEILEPLPKLSSHA-DRNVRSETM 202 (554)
14736 T ss_dssp ----SHHHHHHHSGGGGC------SCHHHHHHHHHHHHHHHHHTCSCSCSCHHHHHHHHHSSHHHHTTCS-SHHHHHHHH
14737 T ss_pred ----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhCCCccccccccHHHHHHHHHHHhhcC-CHHHHHHHH
14738 Confidence 11244555555554 3677888899999888764221110 001234567777777766 788999999
14739
14740
14741 Q NP_000290.2 706 LLLSDMWSS 714 (747)
14742 Q Consensus 706 ~aLsnL~~~ 714 (747)
14743 .+|..+...
14744 T Consensus 203 ~~l~~l~~~ 211 (554)
14745 T 6MZG_E 203 NLILQIYKW 211 (554)
14746 T ss_dssp HHHHHHHHH
14747 T ss_pred HHHHHHHHH
14748 Confidence 998888754
14749
14750
14751 No 396
14752 >6MZE_Z Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: MG, GTP, GDP; 3.6A {Sus scrofa}
14753 Probab=81.14 E-value=0.1 Score=51.20 Aligned_cols=108 Identities=11% Similarity=0.069 Sum_probs=63.0 Template_Neff=12.900
14754
14755 Q NP_000290.2 600 IARLLQSGNSDVVRSGASLLSNMSRHPL-LHR---VMGNQVFPEVTRLL-TSHTGNTSNSEDILSSACYTVRNLMASQPQ 674 (747)
14756 Q Consensus 600 Ll~LL~s~d~eVr~~AL~aLsnLa~~~e-~~~---ll~~giI~~Ll~LL-~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e 674 (747)
14757 +...+.+.+..++..++.+|..++.... ... .....+++.+...+ .+ .++.++..++.++..++.....
14758 T Consensus 300 l~~~l~~~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~d------~~~~v~~~a~~~l~~l~~~~~~ 373 (536)
14759 T 6MZE_Z 300 FQTRISSTKWKDRVEALEEIHNNVLKPVKKLAHKNQDYSDYLRVLANVIQKD------ANVQAVTIAANSVQLLCNSLRS 373 (536)
14760 T ss_dssp GHHHHSCSSHHHHHHHHHHCCCCCCSSCSCBCCTTCCCTTTHHHHHHHHHHC------SCHHHHHHHHHHHHHHHHHTTT
14761 T ss_pred HHHHhhcCCHHHHHHHHHHHHHHhhccchhhccCCCCHHHHHHHHHHHHhcC------chHHHHHHHHHHHHHHHHHccc
14762 Confidence 4455555667778888888888775411 100 11123556666666 54 3678888899999888764322
14763
14764
14765 Q NP_000290.2 675 LAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
14766 Q Consensus 675 ~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
14767 .........+++.++..+.+. +..++..++.+|..++..
14768 T Consensus 374 ~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a~~~l~~l~~~ 412 (536)
14769 T 6MZE_Z 374 NFTRSYGAIVLVPLLERTKEK-KPSVNEAICSALDAVATY 412 (536)
14770 T ss_dssp CCSSHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHT
14771 T ss_pred cccHHHHHHHHHHHHHHhhcc-CHHHHHHHHHHHHHHHHh
14772 Confidence 111011123455666666554 566777777777776654
14773
14774
14775 No 397
14776 >6RXU_UJ Periodic tryptophan protein 2-like protein; ribosome, ribosome biogenesis, rRNA; HET: GTP; 3.5A {Chaetomium thermophilum}
14777 Probab=80.93 E-value=0.12 Score=62.49 Aligned_cols=152 Identities=9% Similarity=0.051 Sum_probs=85.8 Template_Neff=9.700
14778
14779 Q NP_000290.2 548 AIRTYLNLMGKS-----KKDATLEACAGALQNLTASKGLMSSGMSQ--LIGLKEKGLPQIARLLQSG--------NSDVV 612 (747)
14780 Q Consensus 548 ~I~~LL~LL~ss-----~d~eVr~~AL~aL~nLs~~s~~~s~~~~~--~llie~giI~~Ll~LL~s~--------d~eVr 612 (747)
14781 +++.++..+... .+..++..++.+|..++..... .... .. -..+++.|...+... ...++
14782 T Consensus 1625 il~~ll~~L~~~~~~~~~~~~v~~~~l~~L~~l~~~~~~---~~~~~~~~--~~~ll~~L~~~L~~~~~~~~~~~~~~v~ 1699 (1802)
14783 T 6RXU_UJ 1625 IVDASVKALKAVDFAVPEERNLWKRVLCTLAKCFEHDQD---GFWQAPAH--FGAVAPVLVEQFLRAEGQVTATNVNDVI 1699 (1802)
14784 T ss_pred HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCh---hhhcChhH--HHHHHHHHHHHHhCCCCCCCccccHHHH
14785 Confidence 345555555521 2456777788888877764221 0000 11 134556666666532 23567
14786
14787
14788 Q NP_000290.2 613 RSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC 692 (747)
14789 Q Consensus 613 ~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL 692 (747)
14790 ..++.+++.++.......+. ..+++.++..+.+ .++.++..++.++..++.........+. ..+++.+...+
14791 T Consensus 1700 ~~ai~~L~~l~~~~~~~~~~-~~l~~~ll~~l~~------~~~~vR~~al~~L~~l~~~~g~~~~~~l-~~ii~~L~elL 1771 (1802)
14792 T 6RXU_UJ 1700 QDVVPAVVELAAAVESQEHY-KEINTALLKHLRN------GSPGVRLAVVKCQQAITAKLGEDWLHLL-PEMLPYISELQ 1771 (1802)
14793 T ss_pred HHHHHHHHHHHHHhCCchHH-HhHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHcHhhHHhH-HHHHHHHHHHh
14794 Confidence 77888888877531111111 1234445555544 3567888999999988765332222222 24567777777
14795
14796
14797 Q NP_000290.2 693 RSSASPKAAEAARLLLSDMWS 713 (747)
14798 Q Consensus 693 ~s~~d~eVr~aAL~aLsnL~~ 713 (747)
14799 ++. ++.++..+..++..+..
14800 T Consensus 1772 eD~-d~~V~~~a~~~l~~l~~ 1791 (1802)
14801 T 6RXU_UJ 1772 DDD-DEVVERENRRWIVGIEE 1791 (1802)
14802 T ss_pred cCC-CHHHHHHHHHHHHHHHH
14803 Confidence 766 77788888777776654
14804
14805
14806 No 398
14807 >5FVM_B SERINE/THREONINE-PROTEIN KINASE TOR2, TARGET OF; TRANSFERASE, CRYO-EM, TOR, LST8, MTOR; 6.7A {KLUYVEROMYCES MARXIANUS}
14808 Probab=80.75 E-value=0.12 Score=63.47 Aligned_cols=147 Identities=12% Similarity=0.092 Sum_probs=75.7 Template_Neff=11.500
14809
14810 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14811 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14812 +++.+...+. + ..++..++.++..++..... ....+ -..+++.++..+.+.+..++..++.++..+.....
14813 T Consensus 1008 i~~~l~~~l~-~--~~vr~~a~~~l~~l~~~~~~-----~~~~~-~~~ll~~l~~~l~~~~~~~r~~a~~~l~~l~~~~~ 1078 (2471)
14814 T 5FVM_B 1008 IVDVISEFFP-V--LKLQLTIISVIESLSRALEG-----EFNPH-LPTILSLFLDVLEKDQSNKKVVSVRILKSLVVFGP 1078 (2471)
14815 T ss_dssp HHHTTC------------CTHHHHHHHHHTTSSC-----CHHHH-HHHHHHHHHHHHC----CCHHHHHHHHHHHHHHCS
14816 T ss_pred HHHHHHHHcc-c--hhHHHHHHHHHHHHHHHccc-----ChHHH-HHHHHHHHHHHHccCCCCcHHHHHHHHHHHHHHhh
14817 Confidence 3444555444 1 45666778888877754221 01111 23566777777776666677777777776654321
14818
14819
14820 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
14821 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
14822 . ...+ ..+++.+...+.+ .++.++..++.+|..++..... .. ....++..++..+.+. ++.++..++.
14823 T Consensus 1079 ~~~~~l-~~il~~l~~~l~~------~~~~vr~~al~~l~~l~~~~~~--~~-~~~~i~~~l~~~l~~~-~~~vr~~a~~ 1147 (2471)
14824 T 5FVM_B 1079 HLEEYV-HLVLPTIIKLSEF------SSGNLKKAAIITIGRLSKNVNA--LE-MSSRIVQALVRVLNTS-ETEYVKATMN 1147 (2471)
14825 T ss_dssp SCCCHH-HHHHHHHHTTC---------CCHHHHHHHHHHHHHHHC-CC--HH-HHHHHHHHHHHHCC---CTHHHHHHHH
14826 T ss_pred hHHHHH-HHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhhCCh--HH-HHHHHHHHHHHHHcCC-ChHHHHHHHH
14827 Confidence 1 1111 2355666666655 2567888888888888754221 11 1124566666777655 6677888888
14828
14829
14830 Q NP_000290.2 707 LLSDMWSS 714 (747)
14831 Q Consensus 707 aLsnL~~~ 714 (747)
14832 +|..++..
14833 T Consensus 1148 ~l~~l~~~ 1155 (2471)
14834 T 5FVM_B 1148 TLSLLLLQ 1155 (2471)
14835 T ss_dssp HHHHHHHC
14836 T ss_pred HHHHHHHH
14837 Confidence 88777643
14838
14839
14840 No 399
14841 >6GWC_C Tubulin alpha chain, Tubulin beta; microtubule, ARTIFICIAL PROTEIN, ALPHAREP, cytoskeleton; HET: GTP, MES, PGE; 2.6A {Ovis aries}
14842 Probab=80.69 E-value=0.11 Score=45.32 Aligned_cols=49 Identities=8% Similarity=0.093 Sum_probs=29.6 Template_Neff=12.200
14843
14844 Q NP_000290.2 654 SEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
14845 Q Consensus 654 d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
14846 ++.++..++.+|..+... ..++.+..++.+. ++.++..++.++..+...
14847 T Consensus 120 ~~~~r~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~ 168 (232)
14848 T 6GWC_C 120 DTTVRRIAATALGKIGDE-----------RAVEPLIKALKDE-DAAVRLTAARALGEIGDE 168 (232)
14849 T ss_pred CHHHHHHHHHHHHHhccc-----------chHHHHHHHhcCC-CHHHHHHHHHHHHHhCCh
14850 Confidence 455556666666555321 2344455566655 677888888888877653
14851
14852
14853 No 400
14854 >1OYZ_A X-RAY STRUCTURE OF YB61_HAEIN NORTHEAST; STRUCTURAL GENOMICS, PSI, Protein Structure; 2.1A {Escherichia coli} SCOP: a.118.1.16
14855 Probab=80.56 E-value=0.11 Score=46.13 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=32.1 Template_Neff=12.700
14856
14857 Q NP_000290.2 549 IRTYLN-LMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
14858 Q Consensus 549 I~~LL~-LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
14859 ++.+.. ++. +.++.++..++.+|..+....+. .....++.+...+.+.++.++..++.+|..+.
14860 T Consensus 92 ~~~l~~~~l~-~~~~~vr~~a~~~l~~~~~~~~~----------~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~~~ 156 (280)
14861 T 1OYZ_A 92 FNILNNMALN-DKSACVRATAIESTAQRCKKNPI----------YSPKIVEQSQITAFDKSTNVRRATAFAISVIN 156 (280)
14862 T ss_dssp HHHHHHHHHH-CSCHHHHHHHHHHHHHHHHHCGG----------GHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC-
14863 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhcCcc----------cChhHHHHHHHHhcCCCHHHHHHHHHHHHhhc
14864 Confidence 344444 444 34556666666666665532110 11233445555555555666666666665544
14865
14866
14867 No 401
14868 >6GX7_F Tubulin alpha chain, Tubulin beta; microtubule, ALPHAREP, CELL CYCLE, COPN; HET: MES, PGE, SO4, GOL, GTP; 3.19A {Ovis aries}
14869 Probab=80.46 E-value=0.12 Score=44.09 Aligned_cols=122 Identities=14% Similarity=0.214 Sum_probs=55.9 Template_Neff=12.200
14870
14871 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
14872 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
14873 .++.+...+. +.++.++..++..+..+.. ...++.+..++.+.++.++..++.++..+...
14874 T Consensus 46 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~-- 106 (201)
14875 T 6GX7_F 46 AVEPLIKALK-DEDPWVRREAAGALGQIGD----------------ERAVEPLIKALKDEDRYVRRIAARALGKIGDE-- 106 (201)
14876 T ss_dssp GHHHHHHHTT-CSSHHHHHHHHHHHHHHTC----------------GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTCG--
14877 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHCC----------------HHHHHHHHHHhcCCCHHHHHHHHHHHhhcCCh--
14878 Confidence 3444555554 2445555555555544321 11233344445555555666666666555421
14879
14880
14881 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
14882 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
14883 ..++.+...+.+ .++.++..++.++..+... ..++.+..++.+. +..++..++.+
14884 T Consensus 107 -------~~~~~l~~~l~~------~~~~v~~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a~~~ 161 (201)
14885 T 6GX7_F 107 -------RAVEPLIKALKD------EDWQVREDAAKALGQIGDE-----------RAVEPLIKALKDE-DTTVRLEAALA 161 (201)
14886 T ss_dssp -------GGHHHHHHHTTC------SSHHHHHHHHHHHHHHTCG-----------GGHHHHHHHTTCS-SHHHHHHHHHH
14887 T ss_pred -------hhHHHHHHHhhc------CCHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHhCC-CHHHHHHHHHH
14888 Confidence 122333333433 2345555555555554321 1233333444433 45555566666
14889
14890
14891 Q NP_000290.2 708 LSDMWS 713 (747)
14892 Q Consensus 708 LsnL~~ 713 (747)
14893 +..+..
14894 T Consensus 162 l~~~~~ 167 (201)
14895 T 6GX7_F 162 LGKIGG 167 (201)
14896 T ss_dssp HHHHCS
14897 T ss_pred HHhhcc
14898 Confidence 555543
14899
14900
14901 No 402
14902 >2NYL_A Protein phosphatase 2, regulatory subunit; HEAT repeat, HYDROLASE-HYDROLASE INHIBITOR COMPLEX; HET: DAL, MSE, ACB, 1ZN, DAM, FGA; 3.8A {Homo sapiens} SCOP: a.118.1.2
14903 Probab=80.40 E-value=0.11 Score=50.67 Aligned_cols=147 Identities=13% Similarity=0.119 Sum_probs=93.6 Template_Neff=13.500
14904
14905 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
14906 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
14907 ..++.+..++. +.++.++..++.++..+...... .. ....+++.+...+.+.++.++..++.++..+....
14908 T Consensus 158 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-------~~-~~~~~~~~l~~~~~~~~~~~r~~a~~~l~~l~~~~ 228 (582)
14909 T 2NYL_A 158 ELRQYFRNLCS-DDTPMVRRAAASKLGEFAKVLEL-------DN-VKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLL 228 (582)
14910 T ss_dssp HHHHHHHHHHS-CSCHHHHHHHHHHHHHHHTTSCH-------HH-CCCCCHHHHHHHTSCSCHHHHHHHHHHHHHHHHHS
14911 T ss_pred HHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHcCh-------hh-hHhhHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHC
14912 Confidence 35566667776 46778888899988888763221 11 12456677777777777888888988888887641
14913
14914
14915 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
14916 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
14917 ... .....+++.+...+.+ .++.++..++.++..+....+. .......++.+...+.+. ++.++..++.
14918 T Consensus 229 ~~~-~~~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~~~~~~~~---~~~~~~~~~~l~~~l~~~-~~~v~~~a~~ 297 (582)
14919 T 2NYL_A 229 PQE-DLEALVMPTLRQAAED------KSWRVRYMVADKFTELQKAVGP---EITKTDLVPAFQNLMKDC-EAEVRAAASH 297 (582)
14920 T ss_dssp CHH-HHTTTTHHHHHHHHHC------SSHHHHHHHHHTHHHHHHHHCS---HHCCCCCHHHHHHHHTCS-SHHHHHHHHT
14921 T ss_pred CHH-HHHHHHHHHHHHHhcC------CCHHHHHHHHHhHHHHHHHHCC---CCCHhhhHHHHHHHhcCC-hHHHHHHHHH
14922 Confidence 111 1112345556666655 3677888888888888754221 111223566666666655 6778888888
14923
14924
14925 Q NP_000290.2 707 LLSDMWS 713 (747)
14926 Q Consensus 707 aLsnL~~ 713 (747)
14927 ++..+..
14928 T Consensus 298 ~l~~~~~ 304 (582)
14929 T 2NYL_A 298 KVKEFCE 304 (582)
14930 T ss_dssp THHHHHH
14931 T ss_pred HHHHHHH
14932 Confidence 8877765
14933
14934
14935 No 403
14936 >5VJC_B Protein mini spindles; TOG, HEAT Repeat, Tubulin, CELL; 2.0A {Drosophila melanogaster}
14937 Probab=80.32 E-value=0.12 Score=47.18 Aligned_cols=72 Identities=13% Similarity=0.027 Sum_probs=44.4 Template_Neff=11.500
14938
14939 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
14940 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
14941 .+.+.+...+. +.++.++..++..|..++..... ...... ..++..+...+.+.++.++..++.++..++..
14942 T Consensus 50 ~~~~~l~~~l~-~~~~~~r~~a~~~L~~~~~~~~~-----~~~~~~-~~l~~~l~~~l~d~~~~vr~~a~~~l~~l~~~ 121 (271)
14943 T 5VJC_B 50 NVNKALIANMF-HDDFRYHLKVIEQLSEDLAGNSK-----ALVCNL-DLILKWLTLRFYDTNPSVLIKGLEYLVQVFQV 121 (271)
14944 T ss_dssp TCCHHHHHHHT-CSCHHHHHHHHHHHHHHTTTCHH-----HHHHTH-HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
14945 T ss_pred cCCHHHHHhcc-CCCHHHHHHHHHHHHHHHhcCHH-----HHHHHH-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
14946 Confidence 34566777776 46777888888888888764321 011111 23344455555566777888888888877654
14947
14948
14949 No 404
14950 >6RXV_UJ Periodic tryptophan protein 2-like protein; ribosome, ribosome biogenesis, rRNA; HET: GTP; 4.0A {Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)}
14951 Probab=80.28 E-value=0.13 Score=62.13 Aligned_cols=152 Identities=9% Similarity=0.051 Sum_probs=86.0 Template_Neff=9.700
14952
14953 Q NP_000290.2 548 AIRTYLNLMGKS-----KKDATLEACAGALQNLTASKGLMSSGMSQ--LIGLKEKGLPQIARLLQSG--------NSDVV 612 (747)
14954 Q Consensus 548 ~I~~LL~LL~ss-----~d~eVr~~AL~aL~nLs~~s~~~s~~~~~--~llie~giI~~Ll~LL~s~--------d~eVr 612 (747)
14955 +++.++..+... .+..++..++.+|..++..... .... .. -..+++.|...+... ...++
14956 T Consensus 1625 il~~ll~~L~~~~~~~~~~~~v~~~al~~L~~l~~~~~~---~~~~~~~~--~~~il~~L~~~L~~~~~~~~~~~~~~v~ 1699 (1802)
14957 T 6RXV_UJ 1625 IVDASVKALKAVDFAVPEERNLWKRVLCTLAKCFEHDQD---GFWQAPAH--FGAVAPVLVEQFLRAEGQVTATNVNDVI 1699 (1802)
14958 T ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHhcCCC---CcccChhH--HHhHHHHHHHHHHhhcCCCCCccHHHHH
14959 Confidence 345555555521 2456777788888877764221 0000 11 134556666666532 23567
14960
14961
14962 Q NP_000290.2 613 RSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLC 692 (747)
14963 Q Consensus 613 ~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL 692 (747)
14964 ..++.+++.++.......+. ..+++.++..+.+ .++.++..++.++..++.........+. ..+++.+...+
14965 T Consensus 1700 ~~ai~~L~~l~~~~~~~~~~-~~l~~~ll~~l~~------~~~~vR~~al~~L~~l~~~~g~~~~~~l-~eii~~L~elL 1771 (1802)
14966 T 6RXV_UJ 1700 QDVVPAVVELAAAVESQEHY-KEINTALLKHLRN------GSPGVRLAVVKCQQAITAKLGEDWLHLL-PEMLPYISELQ 1771 (1802)
14967 T ss_pred HHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHccC------CCHHHHHHHHHHHHHHHHHHCHhHHhhh-hHHHHHHHHHh
14968 Confidence 77888888877531111111 1234445555544 3567888999999988765332222222 24567777777
14969
14970
14971 Q NP_000290.2 693 RSSASPKAAEAARLLLSDMWS 713 (747)
14972 Q Consensus 693 ~s~~d~eVr~aAL~aLsnL~~ 713 (747)
14973 ++. ++.++..+..++..+..
14974 T Consensus 1772 eD~-d~~V~~~a~~~l~~l~~ 1791 (1802)
14975 T 6RXV_UJ 1772 DDD-DEVVERENRRWIVGIEE 1791 (1802)
14976 T ss_pred cCC-CHHHHHHHHHHHHHHHH
14977 Confidence 766 77788888777776654
14978
14979
14980 No 405
14981 >4I5L_D PP2A A alpha subunit (9-589); EF Hand, Phosphatase, CDC6 (Substrate); HET: FGA, ACB, DAL, MLI, PEG, 1ZN, MAA; 2.43A {Microcystis aeruginosa}
14982 Probab=80.24 E-value=0.11 Score=50.76 Aligned_cols=109 Identities=15% Similarity=0.189 Sum_probs=68.2 Template_Neff=13.400
14983
14984 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
14985 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
14986 ..++.+...+. +.++.++..++.++..+...... .. ....+++.+...+.+.++.++..++.++..+...
14987 T Consensus 238 ~~~~~l~~~l~-~~~~~vr~~~~~~l~~l~~~~~~-------~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~ 308 (584)
14988 T 4I5L_D 238 LVMPTLRQAAE-DKSWRVRYMVADKFTELQKAVGP-------EI-TKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENL 308 (584)
14989 T ss_dssp HTHHHHHHHHT-CSSHHHHHHHHHTHHHHHHHHHH-------HH-CCCCCHHHHHHHHTCSSHHHHHHHHTTHHHHHHTS
14990 T ss_pred HHHHHHHHHhh-CCCHHHHHHHHHHHHHHHHHHCC-------CC-ChhhHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhc
14991 Confidence 35566666776 46778888888888887754221 11 1245667777778777788899999999888764
14992
14993
14994 Q NP_000290.2 626 PLL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
14995 Q Consensus 626 ~e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
14996 ... . ......+++.+...+.+ .+..++..++.++..+..
14997 T Consensus 309 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~l~~ 349 (584)
14998 T 4I5L_D 309 SADCRENVIMSQILPCIKELVSD------ANQHVKSALASVIMGLSP 349 (584)
14999 T ss_dssp CTTTHHHHCCCCCHHHHHHHHTC------SCHHHHHHHHTTGGGGHH
15000 T ss_pred CccchhhHHHHhHHHHHHHHccC------CCHHHHHHHHHHHHHHHH
15001 Confidence 111 1 11123355555555554 245666777777766654
15002
15003
15004 No 406
15005 >1IBR_B RAN IMPORTIN BETA SUBUNIT; SMALL GTPASE NUCLEAR TRANSPORT; HET: GNP; 2.3A {Homo sapiens} SCOP: a.118.1.1
15006 Probab=80.23 E-value=0.12 Score=49.62 Aligned_cols=156 Identities=10% Similarity=0.042 Sum_probs=86.8 Template_Neff=12.900
15007
15008 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLM------------SSGMSQ----LIGLKEKGLPQIARLLQSG----- 607 (747)
15009 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~------------s~~~~~----~llie~giI~~Ll~LL~s~----- 607 (747)
15010 ++.+...+. +.++.++..++.++..++...... ...... .. .-..+++.+...+.+.
15011 T Consensus 261 ~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~ 338 (462)
15012 T 1IBR_B 261 FAITIEAMK-SDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKG-ALQYLVPILTQTLTKQDENDD 338 (462)
15013 T ss_dssp HHHHHHHHH-CSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHH-HHHHHHHHHHHHTTCCCSSCC
15014 T ss_pred HHHHHHHHh-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHhHHH-HHHHHHHHHHHhcccCCCCCC
15015 Confidence 555666666 356777778888888776531000 000000 00 0123344444444433
15016
15017
15018 Q NP_000290.2 608 --NSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSM 684 (747)
15019 Q Consensus 608 --d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~gi 684 (747)
15020 +..++..+..++..++..... .....+++.+...+.+ .++.++..++.++..++...+. ...... ..+
15021 T Consensus 339 ~~~~~~r~~a~~~l~~l~~~~~~--~~~~~~~~~l~~~l~~------~~~~~r~~al~~l~~l~~~~~~~~~~~~~-~~~ 409 (462)
15022 T 1IBR_B 339 DDDWNPCKAAGVCLMLLATCCED--DIVPHVLPFIKEHIKN------PDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQA 409 (462)
15023 T ss_dssp TTCCSHHHHHHHHHHHHHHHTTT--THHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHTSSSSCTTTTCTTT-TTH
15024 T ss_pred CCCCCHHHHHHHHHHHHHHhccC--ccHHhHHHHHHHhccC------CCHHHHHHHHHHHHHHHhCCCHHHHHHHH-HHH
15025 Confidence 445667777777777654111 0111234444455544 3677888999999988764332 111111 235
15026
15027
15028 Q NP_000290.2 685 LNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
15029 Q Consensus 685 L~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
15030 ++.+...+.+. ++.++..++.++..++....
15031 T Consensus 410 ~~~l~~~l~d~-~~~vr~~a~~~l~~l~~~~~ 440 (462)
15032 T 1IBR_B 410 MPTLIELMKDP-SVVVRDTAAWTVGRICELLP 440 (462)
15033 T ss_dssp HHHHHHGGGCS-CHHHHHHHHHHHHHHHHHGG
15034 T ss_pred HHHHHHHcCCC-CHHHHHHHHHHHHHHHHhCh
15035 Confidence 66677777665 78899999999998876443
15036
15037
15038 No 407
15039 >1B3U_A PROTEIN PHOSPHATASE PP2A, 65 KD; SCAFFOLD PROTEIN, PP2A, PHOSPHORYLATION, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.2
15040 Probab=80.14 E-value=0.12 Score=50.76 Aligned_cols=109 Identities=15% Similarity=0.181 Sum_probs=67.7 Template_Neff=13.400
15041
15042 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
15043 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
15044 ..++.+..++. +.++.++..++.++..+...... .. ....+++.+...+.+.++.++..++.++..+....
15045 T Consensus 242 ~~~~~l~~~l~-~~~~~~r~~~~~~l~~~~~~~~~-------~~-~~~~~~~~l~~~l~~~~~~~r~~a~~~l~~l~~~~ 312 (588)
15046 T 1B3U_A 242 LVMPTLRQAAE-DKSWRVRYMVADKFTELQKAVGP-------EI-TKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENL 312 (588)
15047 T ss_dssp HTHHHHHHHHT-CSSHHHHHHHHHTHHHHHHHHCH-------HH-CCCCCHHHHHHHHTCSSHHHHHHHHHHHHHHHHTS
15048 T ss_pred HHHHHHHHHHh-CCCHHHHHHHHhhHHHHHHHHCC-------CC-CHHhHHHHHHHHhccCHHHHHHHHHHHHHHHHHhC
15049 Confidence 35566666776 46777888888888888754221 11 12456677777777777888889999988887641
15050
15051
15052 Q NP_000290.2 627 -LL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
15053 Q Consensus 627 -e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
15054 .. . ......+++.+...+.+ .+..++..++.++..+..
15055 T Consensus 313 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~l~~ 353 (588)
15056 T 1B3U_A 313 SADCRENVIMSQILPCIKELVSD------ANQHVKSALASVIMGLSP 353 (588)
15057 T ss_dssp CTTTHHHHCCCCCHHHHHHHHTC------SCHHHHHHHHTTGGGGHH
15058 T ss_pred CcchhhhhhHHhHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
15059 Confidence 11 1 11113345555555554 245666667777666654
15060
15061
15062 No 408
15063 >4P6Z_G BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
15064 Probab=80.03 E-value=0.13 Score=52.92 Aligned_cols=67 Identities=18% Similarity=0.165 Sum_probs=48.8 Template_Neff=12.000
15065
15066 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
15067 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
15068 +++.+..++. +.++.++..++.+|..+....+. . ...+++.|...+.+.++.++..++.++..++..
15069 T Consensus 152 ~~~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~--------~--~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~ 218 (627)
15070 T 4P6Z_G 152 LAGEVEKLLK-TSNSYLRKKAALCAVHVIRKVPE--------L--MEMFLPATKNLLNEKNHGVLHTSVVLLTEMCER 218 (627)
15071 T ss_dssp HHHHHHHHHT-CSCHHHHHHHHHHHHHHHHHCSG--------G--GGGGHHHHTTCTTCCCHHHHHHHHHHHHHHHHH
15072 T ss_pred HHHHHHHHhh-CCCHHHHHHHHHHHHHHHHHCHH--------H--HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
15073 Confidence 4666777777 46778888899999888764221 1 135677777888777888888898888888654
15074
15075
15076 No 409
15077 >5NR4_A CLIP-associating protein 2; Microtubules, TOG domain, Tubulin, Structural; 1.198A {Homo sapiens}
15078 Probab=79.96 E-value=0.12 Score=44.07 Aligned_cols=109 Identities=12% Similarity=0.062 Sum_probs=69.2 Template_Neff=12.900
15079
15080 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
15081 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
15082 ..+++.+...+.+.++.++..++.++..+........... ...+++.+...+.+.+..++..++.++..+......
15083 T Consensus 51 ~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~~--- 126 (230)
15084 T 5NR4_A 51 GKTVDALTGWVGSSNYRVSLMGLEILSAFVDRLSTRFKSY-VAMVIVALIDRMGDAKDKVRDEAQTLILKLMDQVAP--- 126 (230)
15085 T ss_dssp HHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHGGGGGGG-HHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHTSC---
15086 T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHcCCC---
15087 Confidence 3455666666666778888889999888876543221111 134566666666666677788888888777653210
15088
15089
15090 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
15091 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
15092 ...+++.+...+. +.++.++..++.++..++..
15093 T Consensus 127 ---~~~~~~~l~~~l~-~~~~~~r~~~~~~l~~l~~~ 159 (230)
15094 T 5NR4_A 127 ---PMYIWEQLASGFK-HKNFRSREGVCLCLIETLNI 159 (230)
15095 T ss_dssp ---HHHHHHHHGGGGG-CSCHHHHHHHHHHHHHHHHH
15096 T ss_pred ---HHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHH
15097 Confidence 1234555555665 45667888888888877753
15098
15099
15100 No 410
15101 >2P8Q_A Importin beta-1 subunit, Snurportin-1; HEAT repeat, IBB-domain, Importin, Karyopherin; 2.35A {Homo sapiens} SCOP: a.118.1.1
15102 Probab=79.89 E-value=0.12 Score=54.05 Aligned_cols=154 Identities=11% Similarity=0.064 Sum_probs=92.1 Template_Neff=13.100
15103
15104 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
15105 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
15106 .++.|...+. +.+ +.++..++.+|..++..... . .... ....+++.+...+.+.+ +.++..++.++..++
15107 T Consensus 129 l~~~l~~~l~-~~~~~~~~~~~~~~~l~~l~~~~~~---~-~~~~-~~~~l~~~l~~~l~~~~~~~~vr~~a~~~l~~l~ 202 (876)
15108 T 2P8Q_A 129 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (876)
15109 T ss_dssp HHHHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHSCT---T-SSST-THHHHHHHHHHHHCTTCSCHHHHHHHHHHHHHHG
15110 T ss_pred HHHHHHHHhh-CCCCCHHHHHHHHHHHHHHHHhcCH---H-HHHH-HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
15111 Confidence 4566666666 344 56777888888877754221 0 0011 12456677777777665 788888999998887
15112
15113
15114 Q NP_000290.2 624 RH-PLL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
15115 Q Consensus 624 ~~-~e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
15116 .. ... . ......+++.+...+.+ .++.++..++.+|..+...............+++.+...+.+. ++.+
15117 T Consensus 203 ~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~-~~~v 275 (876)
15118 T 2P8Q_A 203 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 275 (876)
15119 T ss_dssp GGCHHHHTCHHHHHHHHHHHHHHTTC------SSHHHHHHHHHHHHHHHHHCGGGTHHHCCCCCHHHHHHHHTCS-SHHH
15120 T ss_pred HHchhhccCHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhcHHHHHHhhhHHHHHHHHHHhcCC-hHHH
15121 Confidence 64 111 1 11122344455555544 3567888899999888764332222112223566666667655 6778
15122
15123
15124 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
15125 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
15126 +..++.++..+...
15127 T Consensus 276 ~~~a~~~l~~l~~~ 289 (876)
15128 T 2P8Q_A 276 ALQGIEFWSNVCDE 289 (876)
15129 T ss_dssp HHHHHHHHHHHHHH
15130 T ss_pred HHHHHHHHHHHHHH
15131 Confidence 88888888777653
15132
15133
15134 No 411
15135 >4I5L_D PP2A A alpha subunit (9-589); EF Hand, Phosphatase, CDC6 (Substrate); HET: FGA, ACB, DAL, MLI, PEG, 1ZN, MAA; 2.43A {Microcystis aeruginosa}
15136 Probab=79.88 E-value=0.12 Score=50.59 Aligned_cols=147 Identities=14% Similarity=0.094 Sum_probs=80.2 Template_Neff=13.400
15137
15138 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
15139 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
15140 .+++.+...+. +.++.++..++.++..+...... .. .....++.+...+.+.++.++..++.++..+....
15141 T Consensus 320 ~~~~~l~~~l~-~~~~~vr~~~~~~l~~l~~~~~~------~~--~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~ 390 (584)
15142 T 4I5L_D 320 QILPCIKELVS-DANQHVKSALASVIMGLSPILGK------DN--TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVI 390 (584)
15143 T ss_dssp CCHHHHHHHHT-CSCHHHHHHHHTTGGGGHHHHHH------HH--CCCCCHHHHHHHHTCSCHHHHHHHHTCCHHHHHHS
15144 T ss_pred hHHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHhCC------cc--hHHHHHHHHHHHhcCCCHHHHHHHHHcHHHHHHHc
15145 Confidence 45666666776 35667777888888777653211 11 12345666677777777778888888887776541
15146
15147
15148 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
15149 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
15150 .... ....+++.+...+.+ .+..++..++.++..+....+. ......+++.+..++.+. ++.++..++.
15151 T Consensus 391 ~~~~-~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~ 459 (584)
15152 T 4I5L_D 391 GIRQ-LSQSLLPAIVELAED------AKWRVRLAIIEYMPLLAGQLGV---EFFDEKLNSLCMAWLVDH-VYAIREAATS 459 (584)
15153 T ss_dssp CHHH-HHHHHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHHCH---HHCCCCCHHHHHHHTTCS-SHHHHHHHHH
15154 T ss_pred ChHH-HHHhHHHHHHHHHHh------CCHHHHHHHHHHHHHHHHhcCh---HHhHHHHHHHHHHHHcCC-HHHHHHHHHH
15155 Confidence 1111 112244445555544 2456666677777666543111 111112344444555444 5556666666
15156
15157
15158 Q NP_000290.2 707 LLSDMWS 713 (747)
15159 Q Consensus 707 aLsnL~~ 713 (747)
15160 +|..+..
15161 T Consensus 460 ~l~~l~~ 466 (584)
15162 T 4I5L_D 460 NLKKLVE 466 (584)
15163 T ss_dssp HHHHHHH
15164 T ss_pred HHHHHHH
15165 Confidence 6666554
15166
15167
15168 No 412
15169 >1QGR_A IMPORTIN BETA SUBUNIT, IMPORTIN ALPHA-2; TRANSPORT RECEPTOR, NUCLEAR IMPORT, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.1
15170 Probab=79.85 E-value=0.12 Score=54.15 Aligned_cols=154 Identities=11% Similarity=0.065 Sum_probs=92.3 Template_Neff=13.000
15171
15172 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
15173 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
15174 .++.|...+. +.+ +.++..++.+|..++..... . .... ....+++.+...+.+.+ +.++..++.+|..++
15175 T Consensus 129 ~~~~l~~~l~-~~~~~~~~~~~~l~~l~~l~~~~~~---~-~~~~-~~~~l~~~l~~~l~~~~~~~~vr~~a~~~l~~l~ 202 (876)
15176 T 1QGR_A 129 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (876)
15177 T ss_pred HHHHHHHHHc-CCCCCHHHHHHHHHHHHHHHhhCCH---H-HHHH-HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
15178 Confidence 4556666666 344 56777888888877754221 0 0111 12356677777777655 788888999998887
15179
15180
15181 Q NP_000290.2 624 RHP-LL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
15182 Q Consensus 624 ~~~-e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
15183 ... .. . ......+++.+...+.+ .++.++..++.+|..++..............+++.+...+.+. ++.+
15184 T Consensus 203 ~~~~~~~~~~~~~~~i~~~l~~~~~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~l~~~l~~~l~~~-~~~v 275 (876)
15185 T 1QGR_A 203 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 275 (876)
15186 T ss_pred hhCCcccCChHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHhCHHHhhHhhHHhHHHHHHHHhCCC-CHHH
15187 Confidence 652 11 1 11122344455555544 3577888899999888765332222111223566666667655 6778
15188
15189
15190 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
15191 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
15192 +..++.++..++..
15193 T Consensus 276 ~~~a~~~l~~l~~~ 289 (876)
15194 T 1QGR_A 276 ALQGIEFWSNVCDE 289 (876)
15195 T ss_pred HHHHHHHHHHHHHH
15196 Confidence 88888888777654
15197
15198
15199 No 413
15200 >1B3U_A PROTEIN PHOSPHATASE PP2A, 65 KD; SCAFFOLD PROTEIN, PP2A, PHOSPHORYLATION, HEAT; 2.3A {Homo sapiens} SCOP: a.118.1.2
15201 Probab=79.78 E-value=0.12 Score=50.60 Aligned_cols=146 Identities=14% Similarity=0.095 Sum_probs=76.6 Template_Neff=13.400
15202
15203 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
15204 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
15205 .+++.+...+. +.++.++..++.++..+...... . . .....++.+...+.+.++.++..++.++..+....
15206 T Consensus 324 ~~~~~l~~~l~-~~~~~vr~~~~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~~ 394 (588)
15207 T 1B3U_A 324 QILPCIKELVS-DANQHVKSALASVIMGLSPILGK------D-N-TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVI 394 (588)
15208 T ss_dssp CCHHHHHHHHT-CSCHHHHHHHHTTGGGGHHHHCH------H-H-CCCCCHHHHHHHHTCSCHHHHHHHHTTCHHHHHHS
15209 T ss_pred hHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHCc------c-c-hHHhHHHHHHHHhcCCCHHHHHHHHhchHHHHHhc
15210 Confidence 45566666676 35667777888888777653211 1 1 11345666677777777778888888887776541
15211
15212
15213 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
15214 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
15215 .... ....+++.+...+.+ .+..++..++.++..+....+. ......+++.+..++.+. +..++..++.
15216 T Consensus 395 ~~~~-~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~---~~~~~~~~~~l~~~l~~~-~~~vr~~a~~ 463 (588)
15217 T 1B3U_A 395 GIRQ-LSQSLLPAIVELAED------AKWRVRLAIIEYMPLLAGQLGV---EFFDEKLNSLCMAWLVDH-VYAIREAATS 463 (588)
15218 T ss_dssp CHHH-HHHHHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHHCG---GGCCHHHHHHHHHGGGCS-SHHHHHHHHH
15219 T ss_pred CHHH-HHHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHhcCh---HHhHHHHHHHHHHHhcCC-hHHHHHHHHH
15220 Confidence 1111 111234444444444 2455666666666666542111 111112333444444433 4455555555
15221
15222
15223 Q NP_000290.2 707 LLSDMW 712 (747)
15224 Q Consensus 707 aLsnL~ 712 (747)
15225 +|..+.
15226 T Consensus 464 ~l~~l~ 469 (588)
15227 T 1B3U_A 464 NLKKLV 469 (588)
15228 T ss_dssp HHHHHH
15229 T ss_pred HHHHHH
15230 Confidence 555544
15231
15232
15233 No 414
15234 >6MZE_Z Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: MG, GTP, GDP; 3.6A {Sus scrofa}
15235 Probab=79.70 E-value=0.13 Score=50.52 Aligned_cols=152 Identities=11% Similarity=0.094 Sum_probs=94.5 Template_Neff=12.900
15236
15237 Q NP_000290.2 550 RTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIAR-LLQSGNSDVVRSGASLLSNMSRHPLL 628 (747)
15238 Q Consensus 550 ~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~-LL~s~d~eVr~~AL~aLsnLa~~~e~ 628 (747)
15239 +.+...+. +.++.++..++.+|..++..... ........ ....+++.|+. ++.+.++.++..++.+|..+......
15240 T Consensus 57 ~~l~~~l~-d~~~~vr~~a~~~l~~l~~~~~~-~~~~~~~~-~~~~~l~~l~~~~~~~~~~~vr~~a~~~l~~l~~~~~~ 133 (536)
15241 T 6MZE_Z 57 ELFASYIV-DSNVVAQENAIIALHTLLEYISQ-VPNVSTSK-LRLQWIPPLVEKGLSSSRAATKAKATDCIMLLTQSDTS 133 (536)
15242 T ss_dssp HHHHHHHS-CSSHHHHHHHHHHHHHHHHHTSS-SCCTTHHH-HHHHHHHHHCCCCCSCSCHHHHHHHHHHHHHHHHHSSS
15243 T ss_pred HHHHHHhc-CchHHHHHHHHHHHHHHHHHhcc-CCCCCcHH-HHHhhHHHHHHhhccCCCHHHHHHHHHHHHHHhccCcc
15244 Confidence 55666676 47788899999999888754211 00000011 12345666776 56667788899999999888764111
15245
15246
15247 Q NP_000290.2 629 HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAK---QYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15248 Q Consensus 629 ~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~---~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15249 ...+++.+...+.+ .++.++..++.+|..++........ ......+++.+...+.+. ++.++..++
15250 T Consensus 134 ----~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a~ 202 (536)
15251 T 6MZE_Z 134 ----IQQTVNLMLPSLSN------KLPRLVSSCVKCLATIIEEFGFINVSDINILLSEILEPLPKLSSHA-DRNVRSETM 202 (536)
15252 T ss_dssp ----SHHHHHHHSGGGGC------SCHHHHHHHHHHHHHHHHTTCSCSCTTHHHHHHHHHTTHHHHHTCS-SHHHHHHHH
15253 T ss_pred ----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHhCCCcccccccchHHHHHHHHHHhcCC-CHHHHHHHH
15254 Confidence 11244555555554 3678888899999888764222110 001234567777777766 788999999
15255
15256
15257 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
15258 Q Consensus 706 ~aLsnL~~~~ 715 (747)
15259 .++..+....
15260 T Consensus 203 ~~l~~l~~~~ 212 (536)
15261 T 6MZE_Z 203 NLILQIYKWF 212 (536)
15262 T ss_dssp HHHHHHHHHH
15263 T ss_pred HHHHHHHHHH
15264 Confidence 9988887543
15265
15266
15267 No 415
15268 >5F0N_A cohesin subunit Pds5, KLTH0D07062p; heat repeat cohesin subunit, cell; 3.2A {Lachancea thermotolerans}
15269 Probab=79.14 E-value=0.17 Score=59.20 Aligned_cols=150 Identities=8% Similarity=0.095 Sum_probs=100.7 Template_Neff=8.200
15270
15271 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
15272 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
15273 .+++.|...|. +++..+|..|+.+|+.+....+. .. ... .....++.++..+.+.++.++..++.++..+....
15274 T Consensus 271 ~vlp~L~~~L~-~~d~~vR~~Av~~Lg~l~~~~~~--~~-l~~--~~~~l~~~ll~rl~D~~~~VR~~av~~L~~i~~~~ 344 (1175)
15275 T 5F0N_A 271 SVTGLLYQLLC-SDNELFRESATKCVSKMLGTHSL--IN-FAV--AHSDTYKIWLSKMADISPHVRQAWVSEIPSILMSR 344 (1175)
15276 T ss_dssp GGHHHHHHHTT-CSSHHHHHHHHHHHHHHHTSCCS--SC-HHH--HTHHHHHHHHGGGSCSCHHHHHHHHTTHHHHHHHC
15277 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHccccc--cc-HHH--HcHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcC
15278 Confidence 36777888887 47788999999999988753210 00 011 12346667777788888999999999999887641
15279
15280
15281 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
15282 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
15283 .. ....+++.|...+.+ .++.++..++.+|..+..... .........++.|...+.+. ++.+|..|+.
15284 T Consensus 345 ~~---l~~~ii~~L~~~L~D------~d~~VR~~av~~L~~l~~~~~--~~~~~~~~ll~~L~~~l~D~-~~~VR~~A~~ 412 (1175)
15285 T 5F0N_A 345 SD---LSDDISKGLAKALID------SDHTVRLSAIQTFHEVPVKRL--WECLPNAAVFAGLVHLTRET-RRDLRDECID 412 (1175)
15286 T ss_dssp SS---CHHHHHHHHHHHHTC------SSHHHHHHHHGGGTSSCHHHH--HHHCCCHHHHHHHHTTTTCC-SHHHHHHHHH
15287 T ss_pred hh---hHHHHHHHHHHHhCC------CCHHHHHHHHHHHHhhhhhhh--hhcCCchHHHHHHHHHHhcC-CHHHHHHHHH
15288 Confidence 11 112355666666766 378899999999988764311 01111134567777777776 7889999999
15289
15290
15291 Q NP_000290.2 707 LLSDMWSS 714 (747)
15292 Q Consensus 707 aLsnL~~~ 714 (747)
15293 +|+.+...
15294 T Consensus 413 aL~~l~~~ 420 (1175)
15295 T 5F0N_A 413 AVARIYTE 420 (1175)
15296 T ss_dssp HHHHHHHH
15297 T ss_pred HHHHHHHH
15298 Confidence 98887754
15299
15300
15301 No 416
15302 >4NEE_G AP-2 complex subunit sigma, AP-2; clathrin Adaptor AP-2, HIV-1 Nef; 2.8841A {Rattus norvegicus}
15303 Probab=78.80 E-value=0.15 Score=48.94 Aligned_cols=115 Identities=12% Similarity=0.097 Sum_probs=71.6 Template_Neff=12.000
15304
15305 Q NP_000290.2 548 AIRTYLNLM--GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
15306 Q Consensus 548 ~I~~LL~LL--~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
15307 .++.+..++ . +.++.++..++.+|..+....+. .+....+++.|...+.+.++.++..++.+|..+...
15308 T Consensus 149 ~~~~l~~~l~~~-~~~~~vr~~a~~~L~~l~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 219 (398)
15309 T 4NEE_G 149 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRTSPD--------LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 219 (398)
15310 T ss_dssp HTTHHHHHHHCS-SSCHHHHHHHHHHHHHHHHHCGG--------GSCCSSHHHHHHGGGGCSCHHHHHHHHHHHHHHHHH
15311 T ss_pred HHHhHHHHHhcC-CCCHHHHHHHHHHHHHHHHHChh--------hccccchHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
15312 Confidence 455666777 6 46778888999999988764221 111245677788888777888999999999988865
15313
15314
15315 Q NP_000290.2 626 PL-LHRVMGNQVFPEVTRLLTSHTG-------NTSNSEDILSSACYTVRNLMAS 671 (747)
15316 Q Consensus 626 ~e-~~~ll~~giI~~Ll~LL~s~s~-------~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
15317 .. ........+++.+..++.+... ....++.++..++.+|..+...
15318 T Consensus 220 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 273 (398)
15319 T 4NEE_G 220 NPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPP 273 (398)
15320 T ss_dssp CGGGGTHHHHHHHHHHHHHHHCCTTTTGGGEETTEESHHHHHHHHHHHTTSCSC
15321 T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCcCcccccccCCCCHHHHHHHHHHHHhCCCC
15322 Confidence 21 1111112345555555543000 0001456777888888887754
15323
15324
15325 No 417
15326 >3W3U_A Importin subunit beta-3; HEAT repeat, nuclear import, PROTEIN; 2.6A {Saccharomyces cerevisiae}
15327 Probab=78.75 E-value=0.14 Score=55.16 Aligned_cols=158 Identities=8% Similarity=0.034 Sum_probs=93.7 Template_Neff=13.000
15328
15329 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
15330 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
15331 .++.+...+. +.++.++..++.++..++..... ..... ...+++.|...+.+.++.++..++.+|+.++....
15332 T Consensus 849 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 921 (1078)
15333 T 3W3U_A 849 IWPMINTFLL-DNEPILVIFALVVIGDLIQYGGE-----QTASM-KNAFIPKVTECLISPDARIRQAASYIIGVCAQYAP 921 (1078)
15334 T ss_dssp GHHHHHHHHT-SSCHHHHHHHHHHHHHHHHHHGG-----GCHHH-HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHSC
15335 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhcch-----hhHHH-HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHCc
15336 Confidence 3444555555 35667777888888887754221 01111 23567777888888888999999999999887621
15337
15338
15339 Q NP_000290.2 628 -LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
15340 Q Consensus 628 -~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
15341 ........+++.|...+.........+..++..++.+|..+....+.... ....+++.++..+....++.++..++.
15342 T Consensus 922 ~~~~~~~~~~l~~l~~~l~~~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~~ 999 (1078)
15343 T 3W3U_A 922 STYADVCIPTLDTLVQIVDFPGSKLEENRSSTENASAAIAKILYAYNSNIP--NVDTYTANWFKTLPTITDKEAASFNYQ 999 (1078)
15344 T ss_dssp TTTHHHHHHHHHHHHHHTC-CCTTSHHHHHHHHHHHHHHHHHHHHC--------CCHHHHHHHTTCCCCSCHHHHHHHHH
15345 T ss_pred cccHHhHHHHHHHHHHHHhCCCcccccccchHHHHHHHHHHHHHHcccCCC--ChhHHHHHHHHhCCcCCCHHHHHHHHH
15346 Confidence 11111134566666666510000003678899999999998875332211 122456666666632226677888888
15347
15348
15349 Q NP_000290.2 707 LLSDMWSS 714 (747)
15350 Q Consensus 707 aLsnL~~~ 714 (747)
15351 +|..++..
15352 T Consensus 1000 ~l~~l~~~ 1007 (1078)
15353 T 3W3U_A 1000 FLSQLIEN 1007 (1078)
15354 T ss_dssp HHHHHHHT
15355 T ss_pred HHHHHHHc
15356 Confidence 88877754
15357
15358
15359 No 418
15360 >4NEE_B AP-2 complex subunit sigma, AP-2; clathrin Adaptor AP-2, HIV-1 Nef; 2.8841A {Rattus norvegicus}
15361 Probab=78.75 E-value=0.15 Score=49.03 Aligned_cols=115 Identities=12% Similarity=0.097 Sum_probs=71.5 Template_Neff=11.900
15362
15363 Q NP_000290.2 548 AIRTYLNLM--GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
15364 Q Consensus 548 ~I~~LL~LL--~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
15365 .++.+..++ . +.++.++..++.+|..+....+. .+....+++.|...+.+.++.++..++.+|..+...
15366 T Consensus 149 ~~~~l~~~l~~~-~~~~~vr~~a~~~L~~l~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 219 (398)
15367 T 4NEE_B 149 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRTSPD--------LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 219 (398)
15368 T ss_pred HHHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHChh--------HhcHhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
15369 Confidence 455666777 6 46778888999999988764221 111245677788888777888999999999988865
15370
15371
15372 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTG-------NTSNSEDILSSACYTVRNLMAS 671 (747)
15373 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~-------~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
15374 ... .......+++.+..++.+... ....++.++..++.+|..+...
15375 T Consensus 220 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 273 (398)
15376 T 4NEE_B 220 NPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPP 273 (398)
15377 T ss_pred CHHHhHHHHHHHHHHHHHHHcCCCCCCccccccCCCCHHHHHHHHHHHHhhccC
15378 Confidence 211 111112345555555543000 0001456777888888887754
15379
15380
15381 No 419
15382 >3DAD_A FH1/FH2 domain-containing protein 1; Formin, FHOD1, GTPase-binding domain, ubiquitin-superfold; 2.3A {Homo sapiens}
15383 Probab=78.49 E-value=0.18 Score=50.49 Aligned_cols=154 Identities=13% Similarity=0.081 Sum_probs=94.1 Template_Neff=8.200
15384
15385 Q NP_000290.2 565 LEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVM-GNQVFPEVTR 642 (747)
15386 Q Consensus 565 r~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll-~~giI~~Ll~ 642 (747)
15387 ...++..|..++..... ....|++.+++..|+.++...+......++.+|..|...... ..++ ....+..|..
15388 T Consensus 135 l~~~L~~L~~~l~~d~~-----wv~eFi~~~Gl~~L~~~l~~~~~~~~~~~L~cl~~Lm~~~~G~~~v~~~~~~i~~l~~ 209 (339)
15389 T 3DAD_A 135 LRRSLFSLKQIFQEDKD-----LVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYT 209 (339)
15390 T ss_dssp HHHHHHHHHHHHHTCTT-----HHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHH
15391 T ss_pred HHHHHHHHHHHHhCCcc-----HHHHHHHCCHHHHHHHHHHHccHHHHHHHHHHHHHHHhCHHHHHHHHhCHHHHHHHHH
15392 Confidence 34566666666521121 345557788999999999876666777888888888776222 2222 2346677777
15393
15394
15395 Q NP_000290.2 643 LLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFS----------SSMLNNIINLCRSS--ASPKAAEAARLLLSD 710 (747)
15396 Q Consensus 643 LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve----------~giL~~Ll~LL~s~--~d~eVr~aAL~aLsn 710 (747)
15397 .+.+ ....++..++.+|..++...+.....+.+ ...+..++..+... .+.+++..++.++..
15398 T Consensus 210 ~l~s------~~~~v~~~al~iL~~l~~~~~~g~~~Vl~al~~~~~~~~~~~f~~lv~~L~~~~~~d~e~~~~~L~LINa 283 (339)
15399 T 3DAD_A 210 LCAS------LSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVYTVTLINK 283 (339)
15400 T ss_dssp GGGC------SCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHHHHHHHHH
15401 T ss_pred HhcC------CCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHhHHHhhCCCCHHHHHHHHHhhCCCCHHHHHHHHHHHHH
15402 Confidence 7765 35678888888888887654333222222 23466677777642 156677777777777
15403
15404
15405 Q NP_000290.2 711 MWSSKE-------LQGVLRQQGFDRN 729 (747)
15406 Q Consensus 711 L~~~~~-------~~~~~~~~~~~~~ 729 (747)
15407 |+.... +..-|.+.|+..-
15408 T Consensus 284 Ll~~~~d~~~R~~lr~~L~~~Gi~~i 309 (339)
15409 T 3DAD_A 284 TLAALPDQDSFYDVTDALEQQGMEAL 309 (339)
15410 T ss_dssp HHHHCSSHHHHHHHHHHHHHTTHHHH
15411 T ss_pred HHHcCCCHHHHHHHHHHHHHCChHHH
15412 Confidence 664433 3344555665443
15413
15414
15415 No 420
15416 >5VJC_A Protein mini spindles; TOG, HEAT Repeat, Tubulin, CELL; 2.0A {Drosophila melanogaster}
15417 Probab=78.36 E-value=0.16 Score=46.47 Aligned_cols=73 Identities=11% Similarity=0.004 Sum_probs=44.8 Template_Neff=11.400
15418
15419 Q NP_000290.2 546 SDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
15420 Q Consensus 546 ~G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
15421 ....+.+...+. +.++.++..++..|..++..... ..... -..++..+...+.+.++.++..++.++..++..
15422 T Consensus 49 ~~~~~~l~~~l~-~~~~~~r~~a~~~L~~~~~~~~~-----~~~~~-~~~l~~~l~~~l~d~~~~v~~~a~~~l~~l~~~ 121 (271)
15423 T 5VJC_A 49 ANVNKALIANMF-HDDFRYHLKVIEQLSEDLAGNSK-----ALVCN-LDLILKWLTLRFYDTNPSVLIKGLEYLVQVFQV 121 (271)
15424 T ss_dssp TTCCHHHHHHHT-CSSHHHHHHHHHHHHHHTTTCHH-----HHHHT-HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHH
15425 T ss_pred hcCCHHHHHhcc-CCCHHHHHHHHHHHHHHHhcChH-----HHHHH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
15426 Confidence 334566777776 46778888888888888764321 01111 123344444555566777888888888877654
15427
15428
15429 No 421
15430 >5WBJ_A Regulatory-associated protein of TOR 1,Eukaryotic; Raptor, TOS, PROTEIN BINDING; 3.0A {Arabidopsis thaliana}
15431 Probab=78.29 E-value=0.18 Score=59.27 Aligned_cols=156 Identities=10% Similarity=0.095 Sum_probs=112.5 Template_Neff=8.700
15432
15433 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
15434 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
15435 .++.+++.|.+ +..+..|+..|..++..... ....+...++++.++.+|.+..++++..++.++++++.. +
15436 T Consensus 467 qLp~~lq~L~s---~~~r~rAL~~L~~~ld~~~~-----~~~~~~~~gi~p~ll~lL~s~~~~lr~~a~~i~a~i~~~d~ 538 (1287)
15437 T 5WBJ_A 467 QLPIVLQVLLS---QCHRFRALVLLGRFLDMGSW-----AVDLALSVGIFPYVLKLLQTTTNELRQILVFIWTKILALDK 538 (1287)
15438 T ss_dssp CHHHHHHHTTS---STTHHHHHHHHHHHHTTCHH-----HHHHHHHHTCHHHHHHGGGCCCHHHHHHHHHHHHHHHHHCG
15439 T ss_pred HHHHHHHHHcC---HHHHHHHHHHHHHHHhcCHH-----HHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHccCH
15440 Confidence 46666777752 23677899999998874332 234445679999999999988889999999999999876 3
15441
15442
15443 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR-------SSASP 698 (747)
15444 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~-------s~~d~ 698 (747)
15445 .. ..++..+.+..|+.+|.... ..+.++..++.+|+.++...+.....+...+++..+...+. +. ++
15446 T Consensus 539 ~~q~~l~~~~~l~~ll~~L~~~~----~~~~~r~~a~~~Ls~l~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~-~~ 613 (1287)
15447 T 5WBJ_A 539 SCQIDLVKDGGHTYFIRFLDSSG----AFPEQRAMAAFVLAVIVDGHRRGQEACLEANLIGVCLGHLEASRPSDPQP-EP 613 (1287)
15448 T ss_dssp GGHHHHHHTTCHHHHHHHHHCSS----CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHCC----------CH
15449 T ss_pred HHHHHHHHcCCeeeEEEeecCCC----CCHHHHHHHHHHHHHHHcCCHhHHHHHHHCcHHHHHHHHHHhcCCCCCCC-CH
15450 Confidence 33 34455667888888886420 23556778899999998765555555555577788877776 34 67
15451
15452
15453 Q NP_000290.2 699 KAAEAARLLLSDMWSSKE 716 (747)
15454 Q Consensus 699 eVr~aAL~aLsnL~~~~~ 716 (747)
15455 .++..++.+|..|+...+
15456 T Consensus 614 ~lr~~a~~~L~~L~~~~~ 631 (1287)
15457 T 5WBJ_A 614 LFLQWLCLCLGKLWEDFM 631 (1287)
15458 T ss_dssp HHHHHHHHHHHHHHTTCH
15459 T ss_pred HHHHHHHHHHHHHHhccH
15460 Confidence 889999999999986654
15461
15462
15463 No 422
15464 >5WBK_A Regulatory-associated protein of TOR 1,Ribosomal; Raptor, TOS, PROTEIN BINDING; 3.11A {Arabidopsis thaliana}
15465 Probab=78.26 E-value=0.18 Score=59.26 Aligned_cols=156 Identities=10% Similarity=0.095 Sum_probs=112.8 Template_Neff=8.700
15466
15467 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
15468 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
15469 .++.+++.|.+ +..+..|+..|..++..... ....+...++++.|+.+|.+..++++..++.++++++.. +
15470 T Consensus 467 ~Lp~~lq~L~s---~~~r~rAL~~L~~~ld~~~~-----a~~~~l~~Gi~p~ll~lL~s~~~~lr~~a~~i~a~i~~~d~ 538 (1287)
15471 T 5WBK_A 467 QLPIVLQVLLS---QCHRFRALVLLGRFLDMGSW-----AVDLALSVGIFPYVLKLLQTTTNELRQILVFIWTKILALDK 538 (1287)
15472 T ss_dssp SHHHHHHHHTS---GGGHHHHHHHHHHHHTTCHH-----HHHHHHHHTCHHHHHHGGGCCCHHHHHHHHHHHHHHHHHCG
15473 T ss_pred HHHHHHHHHcC---HHHHHHHHHHHHHHHhcCHH-----HHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHccCH
15474 Confidence 46666777752 23677899999998874332 233445679999999999988889999999999999876 3
15475
15476
15477 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCR-------SSASP 698 (747)
15478 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~-------s~~d~ 698 (747)
15479 .. ..++..+.+..|+.+|.... ..+.++..++.+|+.++...+.....+.+.+++..+...|. +. ++
15480 T Consensus 539 ~~q~~l~~~~~l~~ll~~L~~~~----~~~~~r~~a~~~Ls~l~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~-~~ 613 (1287)
15481 T 5WBK_A 539 SCQIDLVKDGGHTYFIRFLDSSG----AFPEQRAMAAFVLAVIVDGHRRGQEACLEANLIGVCLGHLEASRPSDPQP-EP 613 (1287)
15482 T ss_dssp GGHHHHHHTTTHHHHHHHHHSSC----CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHCC----------CH
15483 T ss_pred HHHHHHHHcCCeeeEEEeecCCC----CCHHHHHHHHHHHHHHHcCCHhHHHHHHHCcHHHHHHHHHHhcCCCCCCC-CH
15484 Confidence 33 34455667788888886420 23556778889999998765555555555577888877776 34 68
15485
15486
15487 Q NP_000290.2 699 KAAEAARLLLSDMWSSKE 716 (747)
15488 Q Consensus 699 eVr~aAL~aLsnL~~~~~ 716 (747)
15489 .++..++.+|..|+....
15490 T Consensus 614 ~lr~~a~~~L~~L~~~~~ 631 (1287)
15491 T 5WBK_A 614 LFLQWLCLCLGKLWEDFM 631 (1287)
15492 T ss_dssp HHHHHHHHHHHHHHTTCH
15493 T ss_pred HHHHHHHHHHHHHHcccH
15494 Confidence 889999999999986654
15495
15496
15497 No 423
15498 >6EN4_C Splicing factor 3B subunit 3; Protein complex, splicing modulator, SPLICING; HET: BGZ; 3.08A {Homo sapiens}
15499 Probab=78.21 E-value=0.15 Score=53.32 Aligned_cols=154 Identities=10% Similarity=0.027 Sum_probs=92.8 Template_Neff=12.900
15500
15501 Q NP_000290.2 548 AIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
15502 Q Consensus 548 ~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
15503 .++.+...+.+ .+ +.++..++.+|..+....+. .... .-..+++.+...+.+.++.++..++.++..+....
15504 T Consensus 192 ~~~~l~~~l~~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~ 264 (852)
15505 T 6EN4_C 192 LLPFLKAVCKS-KKSWQARHTGIKIVQQIAILMGC-----AILP-HLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAA 264 (852)
15506 T ss_pred HHHHHHHHHcC-CCCHHHHHHHHHHHHHHHhhCch-----hhcc-cHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHcC
15507 Confidence 34445555552 33 67888888888888754321 1111 12345677777777778889999999998887652
15508
15509
15510 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15511 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15512 .. .......+++.+...+.+ ....++..++.+|..++...+..........+++.+...+.+. ++.++..++
15513 T Consensus 265 ~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~vr~~a~ 337 (852)
15514 T 6EN4_C 265 TPYGIESFDSVLKPLWKGIRQ------HRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP-DEEMKKIVL 337 (852)
15515 T ss_pred CHHHHHHHHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHhcCC-CHHHHHHHH
15516 Confidence 11 111112345666666654 2456777888888887764222111111124566666666655 677888888
15517
15518
15519 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
15520 Q Consensus 706 ~aLsnL~~~~ 715 (747)
15521 .++..++...
15522 T Consensus 338 ~~l~~l~~~~ 347 (852)
15523 T 6EN4_C 338 KVVKQCCGTD 347 (852)
15524 T ss_pred HHHHHHhhcC
15525 Confidence 8888877543
15526
15527
15528 No 424
15529 >5F0O_A cohesin subunit Pds5, KLTH0D07062p, KLTH0G16610p; heat repeat cohesin subunit, cell; 3.5A {Lachancea thermotolerans}
15530 Probab=78.20 E-value=0.18 Score=58.49 Aligned_cols=150 Identities=8% Similarity=0.096 Sum_probs=99.5 Template_Neff=8.400
15531
15532 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
15533 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
15534 .+++.|...|. +.++.+|..|+.+|+.+...... .. .... ....++.++..+.+.++.++..++.++..+....
15535 T Consensus 280 ~vlp~L~~~L~-~~d~~vR~~Av~~Lg~l~~~~~~--~~-l~~~--~~~l~~~ll~rl~D~~~~VR~~av~~l~~i~~~~ 353 (1133)
15536 T 5F0O_A 280 SVTGLLYQLLC-SDNELFRESATKCVSKMLGTHSL--IN-FAVA--HSDTYKIWLSKMADISPHVRQAWVSEIPSILMSR 353 (1133)
15537 T ss_dssp TSTTTTTTTTS-CSSHHHHHHHHHHHHHHHHSCCS--ST-TTTT--THHHHHHHHHTTSCSCHHHHHHHTTSHHHHHTTC
15538 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHccccc--cc-HHHH--cHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC
15539 Confidence 35677778887 47788899999999998653210 00 0111 1345666777778888999999999998887641
15540
15541
15542 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
15543 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
15544 .. ....+++.|...+.+ .++.++..++.+|+.+..... .........++.|...+.+. ++.+|..|+.
15545 T Consensus 354 ~~---l~~~ii~~L~~~L~D------~d~~VR~~av~~L~~l~~~~~--~~~~~~~~ll~~L~~~l~D~-~~~VR~~A~~ 421 (1133)
15546 T 5F0O_A 354 SD---LSDDISKGLAKALID------SDHTVRLSAIQTFHEVPVKRL--WECLPNAAVFAGLVHLTRET-RRDLRDECID 421 (1133)
15547 T ss_dssp ST---THHHHHHHHHHTTSC------SSHHHHHHHHTHHHHSCHHHH--HHHCCCHHHHHHHHHGGGBS-SHHHHHHHHH
15548 T ss_pred hh---HHHHHHHHHHHHhCC------CCHHHHHHHHHHHhhcchhcH--hhcCCchHHHHHHHHHHhcC-CHHHHHHHHH
15549 Confidence 11 112355666666766 478899999999988764311 01111134567777777766 7888999999
15550
15551
15552 Q NP_000290.2 707 LLSDMWSS 714 (747)
15553 Q Consensus 707 aLsnL~~~ 714 (747)
15554 +|+.+...
15555 T Consensus 422 aL~~l~~~ 429 (1133)
15556 T 5F0O_A 422 AVARIYTE 429 (1133)
15557 T ss_dssp HHHHHHHH
15558 T ss_pred HHHHHHHH
15559 Confidence 88887754
15560
15561
15562 No 425
15563 >2NYL_A Protein phosphatase 2, regulatory subunit; HEAT repeat, HYDROLASE-HYDROLASE INHIBITOR COMPLEX; HET: DAL, MSE, ACB, 1ZN, DAM, FGA; 3.8A {Homo sapiens} SCOP: a.118.1.2
15564 Probab=77.79 E-value=0.16 Score=49.54 Aligned_cols=109 Identities=15% Similarity=0.189 Sum_probs=67.0 Template_Neff=13.500
15565
15566 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
15567 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
15568 ..++.+...+. +.++.++..++.++..+...... .. ....+++.+...+.+.++.++..++.++..+...
15569 T Consensus 236 ~~~~~l~~~l~-~~~~~vr~~~~~~l~~~~~~~~~-------~~-~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~~~~~~ 306 (582)
15570 T 2NYL_A 236 LVMPTLRQAAE-DKSWRVRYMVADKFTELQKAVGP-------EI-TKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENL 306 (582)
15571 T ss_dssp TTHHHHHHHHH-CSSHHHHHHHHHTHHHHHHHHCS-------HH-CCCCCHHHHHHHHTCSSHHHHHHHHTTHHHHHHTS
15572 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHhHHHHHHHHCC-------CC-CHhhhHHHHHHHhcCChHHHHHHHHHHHHHHHHhC
15573 Confidence 35566666676 46777888888888887754221 11 1245667777777777788888999998888764
15574
15575
15576 Q NP_000290.2 626 PLL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
15577 Q Consensus 626 ~e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
15578 ... . ......+++.+...+.+ .++.++..++.++..+..
15579 T Consensus 307 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~~~~~l~~l~~ 347 (582)
15580 T 2NYL_A 307 SADCRENVIMSQILPCIKELVSD------ANQHVKSALASVIMGLSP 347 (582)
15581 T ss_dssp CTTTHHHHCCCCCHHHHHHHHTC------SCHHHHHHHHHHGGGGHH
15582 T ss_pred CCcchHHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHH
15583 Confidence 111 1 11112345555555554 245666667777666654
15584
15585
15586 No 426
15587 >3W3W_A Importin subunit beta-3, Protein STE12; HEAT repeat, nuclear import, PROTEIN; 2.2A {Saccharomyces cerevisiae}
15588 Probab=77.60 E-value=0.16 Score=54.65 Aligned_cols=157 Identities=9% Similarity=0.079 Sum_probs=90.3 Template_Neff=13.000
15589
15590 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
15591 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
15592 +++.+...+. +.++.++..++.+|..++...+. .... ....+++.|...+.+.++.++..++.+|+.++.. +
15593 T Consensus 849 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 921 (1078)
15594 T 3W3W_A 849 IWPMINTFLL-DNEPILVIFALVVIGDLIQYGGE-----QTAS-MKNAFIPKVTECLISPDARIRQAASYIIGVCAQYAP 921 (1078)
15595 T ss_dssp GHHHHHHHHC---CHHHHHHHHHHHHHHHTC--C-----CCHH-HHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHSS
15596 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhcch-----hhHH-HHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHCc
15597 Confidence 3445555555 35667777888888888764221 1111 1245677778888888889999999999999876 2
15598
15599
15600 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15601 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
15602 .. ...+ ..+++.+...+.........+..++..++.+|..+....+.... ....+++.++..+....+..++..++
15603 T Consensus 922 ~~~~~~~-~~~l~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~ 998 (1078)
15604 T 3W3W_A 922 STYADVC-IPTLDTLVQIVDFPGSKLEENRSSTENASAAIAKILYAYNSNIP--NVDTYTANWFKTLPTITDKEAASFNY 998 (1078)
15605 T ss_dssp TTTHHHH-HHHHHHHHHHTC--CCSSGGGHHHHHHHHHHHHHHHHHTTTSCC----CHHHHHHHTTCCCCSCHHHHHHHH
15606 T ss_pred cchHhhH-HHHHHHHHHHHhCCCCcchhchhhHHHHHHHHHHHHHHcccCCC--chhHHHHHHHHhCCccCCHHHHHHHH
15607 Confidence 21 1112 34666677766521000003567888899999988765332111 12235566666664222567788888
15608
15609
15610 Q NP_000290.2 706 LLLSDMWSS 714 (747)
15611 Q Consensus 706 ~aLsnL~~~ 714 (747)
15612 .+|..+...
15613 T Consensus 999 ~~l~~l~~~ 1007 (1078)
15614 T 3W3W_A 999 QFLSQLIEN 1007 (1078)
15615 T ss_dssp HHHHC----
15616 T ss_pred HHHHHHHHc
15617 Confidence 888777654
15618
15619
15620 No 427
15621 >4LAC_A Serine/threonine-protein phosphatase 2A activator (E.C.5.2.1.8); PP2A, PTPA, protein phosphatase, signaling; HET: AGS, MES; 2.82A {Homo sapiens}
15622 Probab=77.52 E-value=0.17 Score=44.16 Aligned_cols=115 Identities=13% Similarity=-0.025 Sum_probs=73.8 Template_Neff=12.800
15623
15624 Q NP_000290.2 239 DIECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS 318 (747)
15625 Q Consensus 239 ~~~~~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~ 318 (747)
15626 ........++.+...+.+.++.++..++..+..+....... .....+++.+...+.+.++.++..++.++..+....
15627 T Consensus 27 ~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~---~~~~~~~~~l~~~l~~~~~~vr~~~~~~l~~~~~~~ 103 (258)
15628 T 4LAC_A 27 CESMSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVE---RTRSELLPFIVELAEDAKWRVRLAIIEYMPLLAGQL 103 (258)
15629 T ss_pred CCCccccHHHHHHHHhcCCCHHHHHHHHHHHHHHHHccCHH---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhC
15630 Confidence 33334456666777777777888888888888877543211 112345566666676777788888888888776543
15631
15632
15633 Q NP_000290.2 319 TTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
15634 Q Consensus 319 ~~~~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
15635 .. ......+++.+...+. +.++.++..++.++..+...
15636 T Consensus 104 ~~---~~~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~ 141 (258)
15637 T 4LAC_A 104 GV---EYFDEKLNSLCMAWLV-DHVYAIREAATSNLKKLVEK 141 (258)
15638 T ss_pred CC---hHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHc
15639 Confidence 22 1112245556666665 55677888888888887754
15640
15641
15642 No 428
15643 >6FT5_A A3_A3; alphaRep, artificial protein, chimera, bidomain; HET: GOL, SO4; 1.94A {synthetic construct}
15644 Probab=77.46 E-value=0.17 Score=47.66 Aligned_cols=60 Identities=17% Similarity=0.244 Sum_probs=30.0 Template_Neff=12.800
15645
15646 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
15647 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
15648 ..++.+...+. +.++.++..++.+|..+... ..++.+...+.+.++.++..++.++..+.
15649 T Consensus 54 ~~~~~l~~~l~-~~~~~vr~~a~~~L~~~~~~----------------~~~~~l~~~l~~~~~~vr~~a~~~l~~~~ 113 (409)
15650 T 6FT5_A 54 RAVEPLIKALK-DEDAWVRRAAADALGQIGDE----------------RAVEPLIKALKDEDGWVRQSAAVALGQIG 113 (409)
15651 T ss_pred chHHHHHHHhc-CCCHHHHHHHHHHHHHHcCc----------------hhHHHHHHHhcCCCHHHHHHHHHHHHhhC
15652 Confidence 34455555555 34555555666655554321 12233444444555556666666555544
15653
15654
15655 No 429
15656 >1F59_B IMPORTIN BETA-1/FXFG NUCLEOPORIN; Protein-protein complex, TRANSPORT PROTEIN RECEPTOR; 2.8A {Homo sapiens} SCOP: a.118.1.1
15657 Probab=77.42 E-value=0.17 Score=48.11 Aligned_cols=158 Identities=12% Similarity=0.047 Sum_probs=88.7 Template_Neff=12.900
15658
15659 Q NP_000290.2 547 DAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSS-------GMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASL 618 (747)
15660 Q Consensus 547 G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~-------~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~a 618 (747)
15661 +.+..++.++.+. .++.++..|+.+|.++...... .. ......-....+++.|+..+.+.... +..++.+
15662 T Consensus 35 ~~~~~l~~~l~~~~~~~~~r~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~-r~~~~~~ 112 (442)
15663 T 1F59_B 35 TFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDP-DIKAQYQQRWLAIDANARREVKNYVLHTLGTETYR-PSSASQC 112 (442)
15664 T ss_dssp HHHHHHHHHTTCTTSCHHHHHHHHHHHHTTTCCSSH-HHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCSSS-SCHHHHH
15665 T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHCCCCCc-hhHHHHH
15666 Confidence 4556667776521 3566777788888887643110 00 00000001234555566666544333 7778888
15667
15668
15669 Q NP_000290.2 619 LSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNS--EDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
15670 Q Consensus 619 LsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d--~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
15671 ++.++...... .....+++.+...+.+ .+ +.++..++.+|..+...............+++.+..++.+.
15672 T Consensus 113 l~~l~~~~~~~-~~~~~~~~~l~~~l~~------~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 184 (442)
15673 T 1F59_B 113 VAGIACAEIPV-NQWPELIPQLVANVTN------PNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKE- 184 (442)
15674 T ss_dssp HHHHHHHHGGG-TCCTTHHHHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHSCGGGGGGGHHHHHHHHHHTTSTT-
15675 T ss_pred HHHHHHhcCCc-chhchHHHHHHHHhhC------CCCcHHHHHHHHHHHHHHHhhCCHHHhHHHHHHHHHHHHHHHhcC-
15676 Confidence 88777541110 0112356666666665 23 67888888998888764221111111124566777777655
15677
15678
15679 Q NP_000290.2 697 S--PKAAEAARLLLSDMWSS 714 (747)
15680 Q Consensus 697 d--~eVr~aAL~aLsnL~~~ 714 (747)
15681 + ..++..++.++..++..
15682 T Consensus 185 ~~~~~vr~~a~~~l~~l~~~ 204 (442)
15683 T 1F59_B 185 EPSNNVKLAATNALLNSLEF 204 (442)
15684 T ss_dssp CCCHHHHHHHHHHHHHHSTT
15685 T ss_pred CCCHHHHHHHHHHHHHHHHH
15686 Confidence 4 78889999988888654
15687
15688
15689 No 430
15690 >2NYL_A Protein phosphatase 2, regulatory subunit; HEAT repeat, HYDROLASE-HYDROLASE INHIBITOR COMPLEX; HET: DAL, MSE, ACB, 1ZN, DAM, FGA; 3.8A {Homo sapiens} SCOP: a.118.1.2
15691 Probab=77.33 E-value=0.16 Score=49.36 Aligned_cols=70 Identities=17% Similarity=0.113 Sum_probs=41.5 Template_Neff=13.500
15692
15693 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
15694 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
15695 ..++.+...+. +.++.++..++.++..+...... . . .....++.+...+.+.++.++..++.++..+...
15696 T Consensus 318 ~~~~~l~~~l~-~~~~~vr~~~~~~l~~l~~~~~~------~-~-~~~~~~~~l~~~l~~~~~~v~~~a~~~l~~l~~~ 387 (582)
15697 T 2NYL_A 318 QILPCIKELVS-DANQHVKSALASVIMGLSPILGK------D-N-TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEV 387 (582)
15698 T ss_dssp CCHHHHHHHHT-CSCHHHHHHHHHHGGGGHHHHHH------H-H-CCCCCHHHHHHHHHCSSHHHHHHHHTTHHHHTTT
15699 T ss_pred HHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhCC------c-c-chhhHHHHHHHHhcCCCHHHHHHHHHhHHHHHHh
15700 Confidence 34556666666 35666777777777776653211 1 1 1134556666666666667777777777766643
15701
15702
15703 No 431
15704 >5FVM_B SERINE/THREONINE-PROTEIN KINASE TOR2, TARGET OF; TRANSFERASE, CRYO-EM, TOR, LST8, MTOR; 6.7A {KLUYVEROMYCES MARXIANUS}
15705 Probab=77.24 E-value=0.18 Score=61.64 Aligned_cols=71 Identities=11% Similarity=0.111 Sum_probs=39.6 Template_Neff=11.500
15706
15707 Q NP_000290.2 548 AIRTYLNLMGKSKKD-ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
15708 Q Consensus 548 ~I~~LL~LL~ss~d~-eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
15709 ++..+..++.. ... .++..++.++..++..... ....+ -..+++.+...+.+.++.++..++.+|..++..
15710 T Consensus 925 ~~~~l~~~l~~-~~~~~~~~~~~~~l~~i~~~~~~-----~~~~~-l~~l~~~l~~~l~~~~~~vr~~a~~~L~~l~~~ 996 (2471)
15711 T 5FVM_B 925 VIGVLMKILKD-PSLSIHHSTVIQAIMHIFQTMGL-----RCVIF-LKQIIPGFILVMHTCPPSLLELYFQQLSVLISI 996 (2471)
15712 T ss_dssp HHHHHHHHHHC----CCHHHHHHHHHHHHHHHC-----------C-HHHHHHHHHHHHC--CHHHHHHHHHHHHHHTTS
15713 T ss_pred HHHHHHHHHcC-ccchHHHHHHHHHHHHHHHHccc-----hhHHH-HhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
15714 Confidence 34556666652 322 2666777788777653221 01111 134566677777766778888888888888764
15715
15716
15717 No 432
15718 >3LTJ_A AlphaRep-4; protein engineering, HEAT-like repeat, PROTEIN; 1.8A {synthetic}
15719 Probab=77.21 E-value=0.18 Score=42.73 Aligned_cols=121 Identities=12% Similarity=0.121 Sum_probs=68.3 Template_Neff=12.300
15720
15721 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
15722 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
15723 .++.+...+. +.++.++..++.++..+... ..++.+...+.+.++.++..++.++..+...
15724 T Consensus 77 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~----------------~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~-- 137 (201)
15725 T 3LTJ_A 77 AVEPLIKALK-DEDGWVRQSAAVALGQIGDE----------------RAVEPLIKALKDEDWFVRIAAAFALGEIGDE-- 137 (201)
15726 T ss_dssp GHHHHHHHTT-CSSHHHHHHHHHHHHHHCCG----------------GGHHHHHHHTTCSSHHHHHHHHHHHHHHTCG--
15727 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHhCCH----------------HHHHHHHHHHhCCCHHHHHHHHHHHHHHCCH--
15728 Confidence 3445555565 35566666666666655421 1233444555566667777777776665431
15729
15730
15731 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
15732 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
15733 ..++.+...+.+ .++.++..++.++..+... .....+..++.+. ++.++..++.+
15734 T Consensus 138 -------~~~~~l~~~l~~------~~~~v~~~a~~~l~~~~~~-----------~~~~~l~~~~~~~-~~~vr~~a~~~ 192 (201)
15735 T 3LTJ_A 138 -------RAVEPLIKALKD------EDGWVRQSAADALGEIGGE-----------RVRAAMEKLAETG-TGFARKVAVNY 192 (201)
15736 T ss_dssp -------GGHHHHHHHTTC------SSHHHHHHHHHHHHHHCSH-----------HHHHHHHHHHHHC-CHHHHHHHHHH
15737 T ss_pred -------HHHHHHHHHHhC------CChHHHHHHHHHHHHhCcH-----------HHHHHHHHHHHcC-CHHHHHHHHHH
15738 Confidence 133444455544 2456677777777665431 2334455555555 67778888877
15739
15740
15741 Q NP_000290.2 708 LSDMW 712 (747)
15742 Q Consensus 708 LsnL~ 712 (747)
15743 |.++.
15744 T Consensus 193 l~~~~ 197 (201)
15745 T 3LTJ_A 193 LETHK 197 (201)
15746 T ss_dssp HHHCC
15747 T ss_pred HHhhh
15748 Confidence 77654
15749
15750
15751 No 433
15752 >5JO8_A CEP104; centriolar protein, TOG domain, CEP104; 1.4A {Gallus gallus}
15753 Probab=77.19 E-value=0.18 Score=46.55 Aligned_cols=155 Identities=14% Similarity=0.100 Sum_probs=90.5 Template_Neff=11.100
15754
15755 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLM---SSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
15756 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~---s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
15757 .++.+...+. +.++.++..++.++..++...... ... .... .-..+++.|+..+.+.+..++..+..+|..++.
15758 T Consensus 87 l~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~~~~~~~~-~~~~-~~~~~l~~ll~~l~d~~~~vr~~a~~~l~~l~~ 163 (279)
15759 T 5JO8_A 87 AIFLVRRAIK-DIVSSVFQASLKLLKMIITQYVPKHKLGKL-ETSH-CVEKTLPGLLSRTGDSSSRLRIVAAKFIQEMAL 163 (279)
15760 T ss_dssp HHHHHHHHTT-CSSHHHHHHHHHHHHHCCCCCHHHHTCCHH-HHHH-HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHH
15761 T ss_pred HHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHhcccccCChH-HHHH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHc
15762 Confidence 3445555666 466778888888888877542000 000 0111 113466777777777778888999999888875
15763
15764
15765 Q NP_000290.2 625 HPLLHRVMGNQVFP-EVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
15766 Q Consensus 625 ~~e~~~ll~~giI~-~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
15767 ..... ...++. .+...+... .++.++..++.+|..++..............+++.+...+.+. ++.++..
15768 T Consensus 164 ~~~~~---~~~~~~~~l~~~l~~~-----~~~~~r~~~l~~l~~l~~~~~~~~~~~~~~~i~~~l~~~l~d~-~~~VR~~ 234 (279)
15769 T 5JO8_A 164 WSEVK---PLQIVPVHLVQLLKPN-----SPTHLAMSRVELVECLLKEMGTENSGFTISNVMKFATGALEHR-VYEVRDV 234 (279)
15770 T ss_dssp STTTG---GGCCHHHHHTSCCCTT-----SCHHHHHHHHHHHHHHHHHHCSSSSSCCHHHHHHHHHHHTTCS-CHHHHHH
15771 T ss_pred CCCCC---hhHhHHHHHhhcCCCC-----CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHhcCC-CHHHHHH
15772 Confidence 42110 011222 222333331 1566777888888887764322211111224567777777766 8899999
15773
15774
15775 Q NP_000290.2 704 ARLLLSDMWSS 714 (747)
15776 Q Consensus 704 AL~aLsnL~~~ 714 (747)
15777 +..++..+...
15778 T Consensus 235 a~~~l~~l~~~ 245 (279)
15779 T 5JO8_A 235 ALRIIFGMYRK 245 (279)
15780 T ss_dssp HHHHHHHHHHH
15781 T ss_pred HHHHHHHHHHH
15782 Confidence 99988887643
15783
15784
15785 No 434
15786 >4P6Z_G BST2/tetherin, HIV-1 Vpu, Clathrin adaptor; BST2, tetherin, Vpu, HIV, clathrin; 3.0A {Mus musculus}
15787 Probab=77.19 E-value=0.18 Score=51.67 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=52.0 Template_Neff=12.000
15788
15789 Q NP_000290.2 246 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLET 325 (747)
15790 Q Consensus 246 iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~l 325 (747)
15791 +++.+...+.+.+..++..++..+..+.... ....+++.+...+.+.++.++..++.++..+....+...
15792 T Consensus 117 ~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~-------~~~~~~~~l~~~l~~~~~~vr~~a~~~L~~l~~~~~~~~--- 186 (627)
15793 T 4P6Z_G 117 MTNCIKNDLNHSTQFVQGLALCTLGCMGSSE-------MCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELM--- 186 (627)
15794 T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHCCHH-------HHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHCSGGG---
15795 T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHhcCCHH-------HHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHCHHHH---
15796 Confidence 3444444444555556666666665554211 011334455555555566666666666666654322111
15797
15798
15799 Q NP_000290.2 326 RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSS 359 (747)
15800 Q Consensus 326 l~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas 359 (747)
15801 ..+++.+...+. +.++.++..++.++..+..
15802 T Consensus 187 --~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~ 217 (627)
15803 T 4P6Z_G 187 --EMFLPATKNLLN-EKNHGVLHTSVVLLTEMCE 217 (627)
15804 T ss_dssp --GGGHHHHTTCTT-CCCHHHHHHHHHHHHHHHH
15805 T ss_pred --HHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHH
15806 Confidence 234445555554 4455666666666666654
15807
15808
15809 No 435
15810 >1GCJ_B IMPORTIN-BETA; HEAT REPEAT MOTIF, NUCLEAR PORE-TARGETING; HET: MSE; 2.6A {Mus musculus} SCOP: a.118.1.1
15811 Probab=77.16 E-value=0.17 Score=48.43 Aligned_cols=154 Identities=10% Similarity=0.066 Sum_probs=84.6 Template_Neff=12.800
15812
15813 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLM--------S----SGMSQ----LIGLKEKGLPQIARLLQSG----- 607 (747)
15814 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~--------s----~~~~~----~llie~giI~~Ll~LL~s~----- 607 (747)
15815 ++.+..++. +.++.++..++.++..++...... . ..... .. .-..+++.+...+...
15816 T Consensus 267 ~~~l~~~l~-~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~ 344 (460)
15817 T 1GCJ_B 267 FAITIEAMK-SDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKG-ALQYLVPILTQTLTKQDENDD 344 (460)
15818 T ss_dssp HHHHHHHHT-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSCCCCHHHH-HHHHHHHHHHHHGGGCCSSSC
15819 T ss_pred HHHHHHHhh-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhhhhHhH-HHHHHHHHHHHHHhcCCCCCC
15820 Confidence 555666666 356777778888888776531000 0 00000 00 0122344444444322
15821
15822
15823 Q NP_000290.2 608 --NSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQL-AKQYFSSSM 684 (747)
15824 Q Consensus 608 --d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~-~~~Lve~gi 684 (747)
15825 +..++..+..++..++..... ..+ ..+++.+...+.+ .++.++..++.+|..+....... ....+ ..+
15826 T Consensus 345 ~~~~~~~~~a~~~l~~l~~~~~~-~~~-~~~~~~l~~~l~~------~~~~~r~~a~~~l~~l~~~~~~~~~~~~~-~~~ 415 (460)
15827 T 1GCJ_B 345 DDDWNPCKAAGVCLMLLSTCCED-DIV-PHVLPFIKEHIKN------PDWRYRDAAVMAFGSILEGPEPNQLKPLV-IQA 415 (460)
15828 T ss_dssp TTSCCHHHHHHHHHHHHHHHHGG-GHH-HHHHHHHHHHTTC------SSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHH
15829 T ss_pred CCCCcHHHHHHHHHHHHHhhCcc-ccH-HHHHHHHHHHhcC------CChHHHHHHHHHHHHHHcCCChhhHHHHH-HHH
15830 Confidence 345666677777776654110 111 1234444444444 36778889999999988653321 11111 245
15831
15832
15833 Q NP_000290.2 685 LNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
15834 Q Consensus 685 L~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
15835 ++.+...+.+. ++.++..++++|..++..
15836 T Consensus 416 ~~~l~~~l~~~-~~~vr~~a~~~l~~l~~~ 444 (460)
15837 T 1GCJ_B 416 MPTLIELMKDP-SVVVRDTTAWTVGRICEL 444 (460)
15838 T ss_dssp HHHHHHHTTCS-CHHHHHHHHHHHHHHHHH
15839 T ss_pred HHHHHHHhCCC-CHHHHHHHHHHHHHHHHh
15840 Confidence 66667777666 788999999999988754
15841
15842
15843 No 436
15844 >6GWC_C Tubulin alpha chain, Tubulin beta; microtubule, ARTIFICIAL PROTEIN, ALPHAREP, cytoskeleton; HET: GTP, MES, PGE; 2.6A {Ovis aries}
15845 Probab=76.89 E-value=0.18 Score=43.85 Aligned_cols=121 Identities=12% Similarity=0.169 Sum_probs=73.3 Template_Neff=12.200
15846
15847 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
15848 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
15849 .++.+..++. +.++.++..++.+|..+... ..++.+..++.+.++.++..++.++..+...
15850 T Consensus 108 ~~~~l~~~l~-~~~~~~r~~a~~~l~~~~~~----------------~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~-- 168 (232)
15851 T 6GWC_C 108 AVEPLIKALK-DEDTTVRRIAATALGKIGDE----------------RAVEPLIKALKDEDAAVRLTAARALGEIGDE-- 168 (232)
15852 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHhccc----------------chHHHHHHHhcCCCHHHHHHHHHHHHHhCCh--
15853 Confidence 3455666665 35667777777777665431 1233455566666777888888777766431
15854
15855
15856 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
15857 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
15858 ..++.+...+.+ .++.++..++.+|..+... ..+..+..++.+. ++.++..++.+
15859 T Consensus 169 -------~~~~~l~~~l~~------~~~~v~~~a~~~l~~~~~~-----------~~~~~l~~~~~~~-~~~v~~~a~~~ 223 (232)
15860 T 6GWC_C 169 -------RAVEPLIKALKD------EDAYVRRAAAQALGKIGGE-----------RVRAAMEKLAETG-TGFARKVAVNY 223 (232)
15861 T ss_pred -------hHHHHHHHHhcC------CCHHHHHHHHHHHHHhCcC-----------chHHHHHHHHhCC-CHHHHHHHHHH
15862 Confidence 234445555554 2567777788887776542 2344455555554 66777778777
15863
15864
15865 Q NP_000290.2 708 LSDMW 712 (747)
15866 Q Consensus 708 LsnL~ 712 (747)
15867 |..+.
15868 T Consensus 224 l~~~~ 228 (232)
15869 T 6GWC_C 224 LETHK 228 (232)
15870 T ss_pred HHHHH
15871 Confidence 77654
15872
15873
15874 No 437
15875 >3QML_D 78 kDa glucose-regulated protein homolog; Armadillo like repeats, CHAPERONE-PROTEIN TRANSPORT; HET: PO4; 2.31A {Saccharomyces cerevisiae}
15876 Probab=76.82 E-value=0.22 Score=49.40 Aligned_cols=104 Identities=8% Similarity=0.064 Sum_probs=73.8 Template_Neff=7.900
15877
15878 Q NP_000290.2 609 SDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSS--ML 685 (747)
15879 Q Consensus 609 ~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~g--iL 685 (747)
15880 ...+..++.-|..++..-++ ..+...+ +..|+.++... .....++..|+++|+..+.+++.....+.+.+ ++
15881 T Consensus 42 ~~~~~~aLd~L~dl~hdid~a~~~~~~g-~~~L~~~l~~~----~~~~~ir~~Aa~iigsa~qNNP~aq~~~~~~~~~~l 116 (315)
15882 T 3QML_D 42 IARLEDSFDRIMEFAHDYKHGYKIITHE-FALLANLSLNE----NLPLTLRELSTRVITSCLRNNPPVVEFINESFPNFK 116 (315)
15883 T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHHH-HHHHHHHHHCT----TSCHHHHHHHHHHHHHHHTTCTTHHHHHHHHCTTHH
15884 T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHch-HHHHHHHHhCC----CCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHCccHH
15885 Confidence 34455566666666655333 3455566 77777776541 02578999999999999999988888888766 67
15886
15887
15888 Q NP_000290.2 686 NNII---NLCRS---SASPKAAEAARLLLSDMWSSKEL 717 (747)
15889 Q Consensus 686 ~~Ll---~LL~s---~~d~eVr~aAL~aLsnL~~~~~~ 717 (747)
15890 +.|+ ..+.. ..++.++..++.+|+.++.+.+.
15891 T Consensus 117 ~~Ll~~~~~L~~~~~~~~~~v~~k~L~aLS~Lir~~~~ 154 (315)
15892 T 3QML_D 117 SKIMAALSNLNDSNHRSSNILIKRYLSILNELPVTSED 154 (315)
15893 T ss_dssp HHHHHHHHHHHCC---CTHHHHHHHHHHHHHSCCCGGG
15894 T ss_pred HHHHHHHHhhccCCCcCCHHHHHHHHHHHHhhcCCCcc
15895 Confidence 7777 44443 22678889999999999988765
15896
15897
15898 No 438
15899 >4G3A_B CLIP-associating protein; TOG domain, HEAT repeat, MAP; HET: GOL; 1.994A {Drosophila melanogaster}
15900 Probab=76.80 E-value=0.18 Score=43.50 Aligned_cols=113 Identities=13% Similarity=0.037 Sum_probs=64.2 Template_Neff=12.600
15901
15902 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
15903 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
15904 ..+++.+...+.+.++.++..++..+..++..............+++.+...+.+.++.++..++.++..++........
15905 T Consensus 6 ~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~~v~~~a~~~l~~l~~~~~~~~~ 85 (237)
15906 T 4G3A_B 6 PSDLDGFIQQMPKADMRVKVQLAEDLVTFLSDDTNSIVCTDMGFLIDGLMPWLTGSHFKIAQKSLEAFSELIKRLGSDFN 85 (237)
15907 T ss_dssp CSSHHHHHHHSTTCCHHHHHHHHHHHHHHHHCTTSCCCCSCHHHHHHHHGGGGSSSCHHHHHHHHHHHHHHHHHHGGGGG
15908 T ss_pred cchHHHHHHhcCcCCHHHHHHHHHHHHHHhhCCCCCcccccHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhhhhHH
15909 Confidence 34455566666677778888888888887764321111111123556666667667778888888888887754332111
15910
15911
15912 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
15913 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
15914 .. ...+++.+...+. +.+..++..++.++..+.
15915 T Consensus 86 ~~-~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~ 118 (237)
15916 T 4G3A_B 86 AY-TATVLPHVIDRLG-DSRDTVREKAQLLLRDLM 118 (237)
15917 T ss_dssp GT-HHHHHHHHHHHHT-CSCHHHHHHHHHHHHHHH
15918 T ss_pred HH-HHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHH
15919 Confidence 11 1234455555554 334445555555555544
15920
15921
15922 No 439
15923 >6IDX_A Engulfment and cell motility protein; Adhesion GPCRs, CELL ADHESION; 1.699A {Homo sapiens}
15924 Probab=76.77 E-value=0.22 Score=52.79 Aligned_cols=157 Identities=13% Similarity=0.168 Sum_probs=98.0 Template_Neff=8.400
15925
15926 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG------NSDVVRSGASLLSNMSRHP-LL-HRVMGN 634 (747)
15927 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~------d~eVr~~AL~aLsnLa~~~-e~-~~ll~~ 634 (747)
15928 ..+..++.-|..++.. .. ....|++.+++..|+.++... +......++.+|..+.... .. ..+. .
15929 T Consensus 102 ~~~~~~L~~L~~~~~d-~~-----f~~EFi~~~Gl~~L~~~l~~~~~~~~~~~~~l~~~L~al~~lM~~~~~g~~~l~-~ 174 (524)
15930 T 6IDX_A 102 ETRLDAMKELAKLSAD-VT-----FATEFINMDGIIVLTRLVESGTKLLSHYSEMLAFTLTAFLELMDHGIVSWDMVS-I 174 (524)
15931 T ss_pred HHHHHHHHHHHHHhcC-hh-----HHHHHHHcChHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhcCcccHhhch-H
15932 Confidence 3444566666666653 22 345557788999999988863 4466777888888888764 32 2222 3
15933
15934
15935 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
15936 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
15937 ..+..|..++... ..+..+...++.+|..++...+.....+.....+..|+..|... +..++..++.++..|...
15938 T Consensus 175 ~~i~~l~~~l~~~----~~~~~v~~~aL~iL~~l~~~~~~~~~~v~~~~~f~~Lv~~L~~~-d~~~q~~~L~LINaLl~~ 249 (524)
15939 T 6IDX_A 175 TFIKQIAGYVSQP----MVDVSILQRSLAILESMVLNSQSLYQKIAEEITVGQLISHLQVS-NQEIQTYAIALINALFLK 249 (524)
15940 T ss_pred HHHHHHHHHhCCC----CCChhHHHHHHHHHHHHHhcCHHHHHHHHcCCCHHHHHHHHccC-CHHHHHHHHHHHHHHHhc
15941 Confidence 4667777777542 00237888899999888775433333222222377788888765 677778887777777654
15942
15943
15944 Q NP_000290.2 715 K------ELQGVLRQQGFDRNML 731 (747)
15945 Q Consensus 715 ~------~~~~~~~~~~~~~~~~ 731 (747)
15946 . ++..-|...|+..-..
15947 T Consensus 250 ~~~~~~~~i~~~L~~~gi~~~i~ 272 (524)
15948 T 6IDX_A 250 APEDKRQDMANAFAQKHLRSIIL 272 (524)
15949 T ss_pred CCcccHHHHHHHHHHcCHHHHHH
15950 Confidence 4 3444555666655433
15951
15952
15953 No 440
15954 >6IE1_A Engulfment and cell motility protein; Adhesion GPCR, BAI1-ELMO2 Complex, cell; HET: GOL; 2.48A {Homo sapiens}
15955 Probab=76.77 E-value=0.22 Score=52.79 Aligned_cols=157 Identities=13% Similarity=0.168 Sum_probs=98.0 Template_Neff=8.400
15956
15957 Q NP_000290.2 563 ATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSG------NSDVVRSGASLLSNMSRHP-LL-HRVMGN 634 (747)
15958 Q Consensus 563 eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~------d~eVr~~AL~aLsnLa~~~-e~-~~ll~~ 634 (747)
15959 ..+..++.-|..++.. .. ....|++.+++..|+.++... +......++.+|..+.... .. ..+. .
15960 T Consensus 102 ~~~~~~L~~L~~~~~d-~~-----f~~EFi~~~Gl~~L~~~l~~~~~~~~~~~~~l~~~L~al~~lM~~~~~g~~~l~-~ 174 (524)
15961 T 6IE1_A 102 ETRLDAMKELAKLSAD-VT-----FATEFINMDGIIVLTRLVESGTKLLSHYSEMLAFTLTAFLELMDHGIVSWDMVS-I 174 (524)
15962 T ss_pred HHHHHHHHHHHHHhcC-hh-----HHHHHHHcChHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhcCcccHhhch-H
15963 Confidence 3444566666666653 22 345557788999999988863 4466777888888888764 32 2222 3
15964
15965
15966 Q NP_000290.2 635 QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
15967 Q Consensus 635 giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
15968 ..+..|..++... ..+..+...++.+|..++...+.....+.....+..|+..|... +..++..++.++..|...
15969 T Consensus 175 ~~i~~l~~~l~~~----~~~~~v~~~aL~iL~~l~~~~~~~~~~v~~~~~f~~Lv~~L~~~-d~~~q~~~L~LINaLl~~ 249 (524)
15970 T 6IE1_A 175 TFIKQIAGYVSQP----MVDVSILQRSLAILESMVLNSQSLYQKIAEEITVGQLISHLQVS-NQEIQTYAIALINALFLK 249 (524)
15971 T ss_pred HHHHHHHHHhCCC----CCChhHHHHHHHHHHHHHhcCHHHHHHHHcCCCHHHHHHHHccC-CHHHHHHHHHHHHHHHhc
15972 Confidence 4667777777542 00237888899999888775433333222222377788888765 677778887777777654
15973
15974
15975 Q NP_000290.2 715 K------ELQGVLRQQGFDRNML 731 (747)
15976 Q Consensus 715 ~------~~~~~~~~~~~~~~~~ 731 (747)
15977 . ++..-|...|+..-..
15978 T Consensus 250 ~~~~~~~~i~~~L~~~gi~~~i~ 272 (524)
15979 T 6IE1_A 250 APEDKRQDMANAFAQKHLRSIIL 272 (524)
15980 T ss_pred CCcccHHHHHHHHHHcCHHHHHH
15981 Confidence 4 3444555666655433
15982
15983
15984 No 441
15985 >5H2V_A Importin subunit beta-3, Ubiquitin-like-specific protease; nuclear import, PROTEIN TRANSPORT-HYDROLASE complex; 2.8A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
15986 Probab=76.57 E-value=0.18 Score=54.22 Aligned_cols=157 Identities=9% Similarity=0.079 Sum_probs=92.1 Template_Neff=13.000
15987
15988 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
15989 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
15990 +++.+...+. +.++.++..++.++..++..... .... ....+++.|...+.+.++.++..++.+|+.++.. +
15991 T Consensus 849 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 921 (1078)
15992 T 5H2V_A 849 IWPMINTFLL-DNEPILVIFALVVIGDLIQYGGE-----QTAS-MKNAFIPKVTECLISPDARIRQAASYIIGVCAQYAP 921 (1078)
15993 T ss_dssp GHHHHHHHHH-SSSHHHHHHHHHHHHHHHHHHTT-----TTTT-THHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHCT
15994 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHhcch-----hhHH-HHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHCc
15995 Confidence 3445555555 35667777888888887754221 1111 1245677778888888889999999999999876 2
15996
15997
15998 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
15999 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
16000 .. ...+ ..+++.+...+.........+..++..++.+|..+....+.... ....+++.++..+....+..++..++
16001 T Consensus 922 ~~~~~~~-~~~l~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~~~~~ 998 (1078)
16002 T 5H2V_A 922 STYADVC-IPTLDTLVQIVDFPGSKLEENRSSTENASAAIAKILYAYNSNIP--NVDTYTANWFKTLPTITDKEAASFNY 998 (1078)
16003 T ss_dssp TTTHHHH-TTTHHHHHHHTC--CCSSTTTHHHHHHHHHHHHHHHHHC---------CHHHHHHHTTCCCCSCHHHHHHHH
16004 T ss_pred cchHHhH-HHHHHHHHHHHhCCCCccccccchHHHHHHHHHHHHHHcccCCC--ChhHHHHHHHHhCCccCCHHHHHHHH
16005 Confidence 21 1111 34666677766521000003567888899999888764322111 11234556666664222567777888
16006
16007
16008 Q NP_000290.2 706 LLLSDMWSS 714 (747)
16009 Q Consensus 706 ~aLsnL~~~ 714 (747)
16010 .+|..+...
16011 T Consensus 999 ~~l~~l~~~ 1007 (1078)
16012 T 5H2V_A 999 QFLSQLIEN 1007 (1078)
16013 T ss_dssp HHHHHHHC-
16014 T ss_pred HHHHHHHHc
16015 Confidence 888777654
16016
16017
16018 No 442
16019 >1TE4_A conserved protein MTH187; MTH187, Methanobacterium thermoautotrophicum, structural proteomics; NMR {Methanothermobacter thermautotrophicus} SCOP: a.118.1.16
16020 Probab=76.51 E-value=0.19 Score=39.52 Aligned_cols=118 Identities=13% Similarity=0.147 Sum_probs=65.1 Template_Neff=12.000
16021
16022 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
16023 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
16024 ..+.+...+. +.++.++..++..|..+.. ..++.+...+.+.++.++..++.++..+...
16025 T Consensus 13 ~~~~~~~~l~-~~~~~~r~~a~~~l~~~~~-----------------~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~-- 72 (131)
16026 T 1TE4_A 13 GLVPRGSHMA-DENKWVRRDVSTALSRMGD-----------------EAFEPLLESLSNEDWRIRGAAAWIIGNFQDE-- 72 (131)
16027 T ss_dssp --------CC-SSCCCSSSSCCSSTTSCSS-----------------TTHHHHHHGGGCSCHHHHHHHHHHHGGGCSH--
16028 T ss_pred CccccHHHhc-CCCHHHHHHHHHHHHHhcH-----------------HHHHHHHHHhcCCCHHHHHHHHHHHHcCCCh--
16029 Confidence 3455666666 4666777777766654421 1234455556666777888888888776532
16030
16031
16032 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
16033 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
16034 ..++.|...+.+ .++.++..++.+|..+... ..++.+...+.+. +..++..++.+
16035 T Consensus 73 -------~~~~~l~~~l~~------~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a~~~ 127 (131)
16036 T 1TE4_A 73 -------RAVEPLIKLLED------DSGFVRSGAARSLEQIGGE-----------RVRAAMEKLAETG-TGFARKVAVNY 127 (131)
16037 T ss_dssp -------HHHHHHHHHHHH------CCTHHHHHHHHHHHHHCSH-----------HHHHHHHHHTTSC-CTHHHHHHHHH
16038 T ss_pred -------hhHHHHHHHhcC------CCHHHHHHHHHHHHHhCCH-----------HHHHHHHHHHcCC-CHHHHHHHHHH
16039 Confidence 133444455544 2567777788888776531 1344455555544 56677766666
16040
16041
16042 Q NP_000290.2 708 LSD 710 (747)
16043 Q Consensus 708 Lsn 710 (747)
16044 +..
16045 T Consensus 128 l~~ 130 (131)
16046 T 1TE4_A 128 LET 130 (131)
16047 T ss_dssp GGG
16048 T ss_pred Hhc
16049 Confidence 543
16050
16051
16052 No 443
16053 >6S47_Bi 60S ribosomal protein L2-A, 60S; New1, ABCF, Ribosomal Protein, Recycling; HET: ATP; 3.28A {Saccharomyces cerevisiae}
16054 Probab=76.45 E-value=0.2 Score=54.82 Aligned_cols=155 Identities=15% Similarity=0.167 Sum_probs=91.4 Template_Neff=11.700
16055
16056 Q NP_000290.2 548 AIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH- 625 (747)
16057 Q Consensus 548 ~I~~LL~LL~ss~d-~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~- 625 (747)
16058 +++.|..++.. .+ +.++..++.+|..++..... .........+++.|+.++.+.++.++..|+.+|..++..
16059 T Consensus 127 ~~~~l~~~l~~-~~~~~vr~~a~~~l~~i~~~~~~-----~~~~~~~~~~~~~l~~~l~d~~~~vr~~a~~~L~~l~~~~ 200 (972)
16060 T 6S47_Bi 127 VLPTILDYLSS-GAKWQAKMAALSVVDRIREDSAN-----DLLELTFKDAVPVLTDVATDFKPELAKQGYKTLLDYVSIL 200 (972)
16061 T ss_pred hHHHHHHHcCC-CCCHHHHHHHHHHHHHHHhhCCH-----HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHh
16062 Confidence 46667777763 44 67888889998888543221 111112345777788888888888899999988888753
16063
16064
16065 Q NP_000290.2 626 PL-L-H----RV---MG--------------------------NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMA 670 (747)
16066 Q Consensus 626 ~e-~-~----~l---l~--------------------------~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~ 670 (747)
16067 .. . . .+ +. ..+++.+...+.+. ..+..++..++++|..++.
16068 T Consensus 201 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~vr~~a~~~l~~l~~ 276 (972)
16069 T 6S47_Bi 201 DNLDLSPRYKLIVDTLQDPSKVPESVKSLSSVTFVAEVTEPSLSLLVPILNRSLNLS----SSSQEQLRQTVIVVENLTR 276 (972)
16070 T ss_pred CcHHHHHHHHHHHHHcCChHHHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhCC----CCCHHHHHHHHHHHHHHHH
16071 Confidence 10 0 0 00 00 00223333333220 0245677788888888875
16072
16073
16074 Q NP_000290.2 671 --SQPQLAKQYFSSSMLNNIINLC-RSSASPKAAEAARLLLSDMWSS 714 (747)
16075 Q Consensus 671 --~s~e~~~~Lve~giL~~Ll~LL-~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
16076 ........+ ...+++.|+..+ .+. +..++..|+.+|..++..
16077 T Consensus 277 ~~~~~~~~~~~-~~~i~~~L~~~l~~d~-~~~vr~~a~~~l~~l~~~ 321 (972)
16078 T 6S47_Bi 277 LVNNRNEIESF-IPLLLPGIQKVVDTAS-LPEVRELAEKALNVLKED 321 (972)
16079 T ss_pred hcCChhHcHhh-HHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHhhh
16080 Confidence 211111111 124566777777 555 778899999999998876
16081
16082
16083 No 444
16084 >1OYZ_A X-RAY STRUCTURE OF YB61_HAEIN NORTHEAST; STRUCTURAL GENOMICS, PSI, Protein Structure; 2.1A {Escherichia coli} SCOP: a.118.1.16
16085 Probab=76.37 E-value=0.19 Score=44.51 Aligned_cols=96 Identities=7% Similarity=0.086 Sum_probs=47.9 Template_Neff=12.700
16086
16087 Q NP_000290.2 596 GLPQIAR-LLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ 674 (747)
16088 Q Consensus 596 iI~~Ll~-LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e 674 (747)
16089 .++.+.. ++.+.++.++..++.+|..+...... .....++.+...+.+ .++.++..++.+|..+..
16090 T Consensus 91 ~~~~l~~~~l~~~~~~vr~~a~~~l~~~~~~~~~---~~~~~~~~l~~~l~~------~~~~v~~~a~~~l~~~~~---- 157 (280)
16091 T 1OYZ_A 91 VFNILNNMALNDKSACVRATAIESTAQRCKKNPI---YSPKIVEQSQITAFD------KSTNVRRATAFAISVIND---- 157 (280)
16092 T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGG---GHHHHHHHHHHHTTC------SCHHHHHHHHHHHHTC------
16093 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCcc---cChhHHHHHHHHhcC------CCHHHHHHHHHHHHhhcc----
16094 Confidence 3444444 44444555555555555554432100 112244455555544 245566666666655442
16095
16096
16097 Q NP_000290.2 675 LAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMW 712 (747)
16098 Q Consensus 675 ~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~ 712 (747)
16099 ...++.+..++.+. ++.++..++.++..+.
16100 T Consensus 158 -------~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~ 187 (280)
16101 T 1OYZ_A 158 -------KATIPLLINLLKDP-NGDVRNWAAFAININK 187 (280)
16102 T ss_dssp --------CCHHHHHHHHTCS-SHHHHHHHHHHHHHHT
16103 T ss_pred -------hhhHHHHHHHHcCC-CHHHHHHHHHHHHhhc
16104 Confidence 12345555666655 6677777777777543
16105
16106
16107 No 445
16108 >5NR4_A CLIP-associating protein 2; Microtubules, TOG domain, Tubulin, Structural; 1.198A {Homo sapiens}
16109 Probab=76.18 E-value=0.19 Score=42.69 Aligned_cols=111 Identities=10% Similarity=0.045 Sum_probs=61.9 Template_Neff=12.900
16110
16111 Q NP_000290.2 595 KGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HR---V--MGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNL 668 (747)
16112 Q Consensus 595 giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~---l--l~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnL 668 (747)
16113 ..++.+...+.+.+..++..++..|..+...... .. . ....+++.+...+.+ .++.++..++.++..+
16114 T Consensus 6 ~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l 79 (230)
16115 T 5NR4_A 6 RSMEYFCAQVQQKDVGGRLQVGQELLLYLGAPGAISDLEEDLGRLGKTVDALTGWVGS------SNYRVSLMGLEILSAF 79 (230)
16116 T ss_dssp CCHHHHHHHTTCSCGGGHHHHHHHHHHHHHC-----CTTSCHHHHHHHHHHHHHHHHC------SSHHHHHHHHHHHHHH
16117 T ss_pred hhHHHHHHHHhCCChhHHHHHHHHHHHHhcCCcccCchHHHHHHHHHHHHHHHHHHcC------CCHHHHHHHHHHHHHH
16118 Confidence 3455566666667778888888888888765211 10 0 012345555666654 3677888888888888
16119
16120
16121 Q NP_000290.2 669 MASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
16122 Q Consensus 669 a~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
16123 +...+....... ..+++.++..+.+. +..++..++.++..++.
16124 T Consensus 80 ~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~ 122 (230)
16125 T 5NR4_A 80 VDRLSTRFKSYV-AMVIVALIDRMGDA-KDKVRDEAQTLILKLMD 122 (230)
16126 T ss_dssp HHHHGGGGGGGH-HHHHHHHHHHTTCS-SHHHHHHHHHHHHHHHH
16127 T ss_pred HHHhhHHHHHHH-HHHHHHHHHHhccC-CHHHHHHHHHHHHHHHH
16128 Confidence 764322111111 23445555555544 45566666666665553
16129
16130
16131 No 446
16132 >5A1V_E ADP-RIBOSYLATION FACTOR 1, COATOMER SUBUNIT; TRANSPORT PROTEIN, COPI, COATOMER, COATED; 21.0A {SACCHAROMYCES CEREVISIAE}
16133 Probab=75.90 E-value=0.22 Score=54.55 Aligned_cols=137 Identities=11% Similarity=0.073 Sum_probs=78.0 Template_Neff=10.900
16134
16135 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
16136 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
16137 +++.|+.++. +.+..++..++.++..+....+. . ..+++.|...+.+.++.++..++.+|..+.....
16138 T Consensus 69 l~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~----------~-~~i~~~l~~~L~~~~~~vr~~al~~L~~~~~~~~ 136 (874)
16139 T 5A1V_E 69 AFFAMTKLFQ-SNDPTLRRMCYLTIKEMSCIAED----------V-IIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTM 136 (874)
16140 T ss_dssp HHHHHHHGGG-SCCHHHHHHHHHHHHHHHTSCSC----------G-GGHHHHHHHHHHSSSHHHHHHHHHHHHHHCCHHH
16141 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHhcccCch----------H-hHHHHHHHHhcCCCChhhHHHHHHHHhhcCCHHH
16142 Confidence 4555666666 36667777777777776653211 1 2345566666666677777777777776643210
16143
16144
16145 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
16146 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
16147 ...+++.+...+.+ .++.++..++.++..+....+... ...++.+...+.+. ++.++..++.+
16148 T Consensus 137 -----~~~l~~~l~~~l~d------~~~~Vr~~a~~~l~~l~~~~~~~~-----~~~~~~l~~~l~~~-~~~vr~~a~~~ 199 (874)
16149 T 5A1V_E 137 -----LQAVERYMKQAIVD------KVPSVSSSALVSSLHLLKCSFDVV-----KRWVNEAQEAASSD-NIMVQYHALGL 199 (874)
16150 T ss_dssp -----HHHHHHHHHHHHTC------SSHHHHHHHHHHHHHHHHHCHHHH-----HHTHHHHHHHHTCC-SHHHHHHHHHH
16151 T ss_pred -----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCHHHH-----HHHHHHHHHHhcCC-CHHHHHHHHHH
16152 Confidence 01234444455544 256677777777777765322111 13445555555544 56667777766
16153
16154
16155 Q NP_000290.2 708 LSDMWS 713 (747)
16156 Q Consensus 708 LsnL~~ 713 (747)
16157 |..+..
16158 T Consensus 200 L~~l~~ 205 (874)
16159 T 5A1V_E 200 LYHVRK 205 (874)
16160 T ss_dssp HHHHHC
16161 T ss_pred HHHHHh
16162 Confidence 666654
16163
16164
16165 No 447
16166 >5NZR_G Coatomer subunit alpha, Coatomer subunit; COPI, coatomer, coated vesicles, Transport; 9.2A {Mus musculus}
16167 Probab=75.90 E-value=0.22 Score=54.55 Aligned_cols=137 Identities=11% Similarity=0.073 Sum_probs=78.0 Template_Neff=10.900
16168
16169 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
16170 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
16171 +++.|+.++. +.+..++..++.++..+....+. . ..+++.|...+.+.++.++..++.+|..+.....
16172 T Consensus 69 l~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~----------~-~~i~~~l~~~L~~~~~~vr~~al~~L~~~~~~~~ 136 (874)
16173 T 5NZR_G 69 AFFAMTKLFQ-SNDPTLRRMCYLTIKEMSCIAED----------V-IIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTM 136 (874)
16174 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHhcccCch----------H-hHHHHHHHHhcCCCChhhHHHHHHHHhhcCCHHH
16175 Confidence 4555666666 36667777777777776653211 1 2345566666666677777777777776643210
16176
16177
16178 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
16179 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
16180 ...+++.+...+.+ .++.++..++.++..+....+... ...++.+...+.+. ++.++..++.+
16181 T Consensus 137 -----~~~l~~~l~~~l~d------~~~~Vr~~a~~~l~~l~~~~~~~~-----~~~~~~l~~~l~~~-~~~vr~~a~~~ 199 (874)
16182 T 5NZR_G 137 -----LQAVERYMKQAIVD------KVPSVSSSALVSSLHLLKCSFDVV-----KRWVNEAQEAASSD-NIMVQYHALGL 199 (874)
16183 T ss_pred -----HHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHhcCHHHH-----HHHHHHHHHHhcCC-CHHHHHHHHHH
16184 Confidence 01234444455544 256677777777777765322111 13445555555544 56667777766
16185
16186
16187 Q NP_000290.2 708 LSDMWS 713 (747)
16188 Q Consensus 708 LsnL~~ 713 (747)
16189 |..+..
16190 T Consensus 200 L~~l~~ 205 (874)
16191 T 5NZR_G 200 LYHVRK 205 (874)
16192 T ss_pred HHHHHh
16193 Confidence 666654
16194
16195
16196 No 448
16197 >6HWP_A A3_bGFPD; alphaRep, artificial protein, chimera, bidomain; 2.547A {synthetic construct}
16198 Probab=75.54 E-value=0.21 Score=46.83 Aligned_cols=49 Identities=8% Similarity=0.078 Sum_probs=32.0 Template_Neff=12.900
16199
16200 Q NP_000290.2 654 SEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
16201 Q Consensus 654 d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
16202 ++.++..++.++..+.. ...++.+..++.+. ++.++..++.++..+...
16203 T Consensus 129 ~~~vr~~~~~~l~~~~~-----------~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~ 177 (409)
16204 T 6HWP_A 129 DWFVRIAAAFALGEIGD-----------ERAVEPLIKALKDE-DGWVRQSAADALGEIGGE 177 (409)
16205 T ss_dssp SHHHHHHHHHHHHHHTC-----------GGGHHHHHHGGGCS-SHHHHHHHHHHHHHHCCH
16206 T ss_pred CHHHHHHHHHHHHHhCC-----------hhhHHHHHHHhcCC-CHHHHHHHHHHHHHhcch
16207 Confidence 45666666666666543 12345566666655 678888888888887754
16208
16209
16210 No 449
16211 >3W3U_A Importin subunit beta-3; HEAT repeat, nuclear import, PROTEIN; 2.6A {Saccharomyces cerevisiae}
16212 Probab=75.50 E-value=0.21 Score=53.79 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=91.0 Template_Neff=13.000
16213
16214 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-PL 627 (747)
16215 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~e 627 (747)
16216 ++.+...+. +.++.++..++.+|..++..... .... .-..+++.+...+.+.++.++..++.++..++.. ..
16217 T Consensus 358 ~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~ 430 (1078)
16218 T 3W3U_A 358 FQYLQQMIT-STEWRERFAAMMALSSAAAGCAD-----VLIG-EIPKILDMVIPLINDPHPRVQYGCCKVLGQISTAFSP 430 (1078)
16219 T ss_dssp HHHHHHHTT-CSSHHHHHHHHHHHHHHTTTTHH-----HHTT-SHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTTT
16220 T ss_pred HHHHHHHhc-CCCHHHHHHHHHHHHHHHHccHH-----HHHh-hHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHccH
16221 Confidence 344445554 35677888888888888764321 0111 1135666677777777888999999999998865 11
16222
16223
16224 Q NP_000290.2 628 L-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
16225 Q Consensus 628 ~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
16226 . .......+++.+...+... .+..++..++.+|..++..... ..... -..++..+...+.+. ++.++..++
16227 T Consensus 431 ~~~~~~~~~~~~~l~~~l~~~-----~~~~vr~~a~~~l~~l~~~~~~~~~~~~-~~~~~~~l~~~l~~~-~~~~~~~~~ 503 (1078)
16228 T 3W3U_A 431 FIQRTAHDRILPALISKLTSE-----CTSRVQTHAAAALVAFSEFASKDILEPY-LDSLLTNLLVLLQSN-KLYVQEQAL 503 (1078)
16229 T ss_dssp HHHHHHHHHHHHHHHHHSSTT-----SCHHHHHHHHHHHHHHHTTCCHHHHGGG-HHHHHHHHHHHHTCS-SHHHHHHHH
16230 T ss_pred HHHHHHHHHHHHHHHHHcCCC-----CCHHHHHHHHHHHHHHHHhCChhhhHHH-HHHHHHHHHHHhcCC-CHHHHHHHH
16231 Confidence 1 1111123555566655521 2567788888888888764221 11111 123556666666655 667777788
16232
16233
16234 Q NP_000290.2 706 LLLSDMWSS 714 (747)
16235 Q Consensus 706 ~aLsnL~~~ 714 (747)
16236 .+|..++..
16237 T Consensus 504 ~~l~~l~~~ 512 (1078)
16238 T 3W3U_A 504 TTIAFIAEA 512 (1078)
16239 T ss_dssp HHHHHHHHH
16240 T ss_pred HHHHHHHHH
16241 Confidence 887776643
16242
16243
16244 No 450
16245 >4QMI_B Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG domain; 1.9A {Homo sapiens}
16246 Probab=75.47 E-value=0.21 Score=43.16 Aligned_cols=107 Identities=13% Similarity=0.065 Sum_probs=67.9 Template_Neff=12.600
16247
16248 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
16249 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
16250 .+++.+...+.+.++.++..++.++..+........... ...+++.+...+.+.+..++..++.++..+.....
16251 T Consensus 59 ~~~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~----- 132 (240)
16252 T 4QMI_B 59 ELPTALKGRLNDSNKILVQQTLNILQQLAVAMGPNIKQH-VKNLGIPIITVLGDSKNNVRAAALATVNAWAEQTG----- 132 (240)
16253 T ss_dssp THHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHGGGGGGG-CCCCCHHHHHHTTCSSHHHHHHHHHHHHHHHHHHC-----
16254 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhcHHHHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC-----
16255 Confidence 344555556666777888888888888876533221111 12355666666666667788888888877765422
16256
16257
16258 Q NP_000290.2 325 TRRQNGI--REAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
16259 Q Consensus 325 ll~~~IL--~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
16260 ...++ +.+...+. +.++.++..++.++..++..
16261 T Consensus 133 --~~~~~~~~~l~~~l~-~~~~~~r~~~~~~l~~l~~~ 167 (240)
16262 T 4QMI_B 133 --MKEWLEGEDLSEELK-KENPFLRQELLGWLAEKLPT 167 (240)
16263 T ss_dssp --SHHHHSSSHHHHHHT-SCCHHHHHHHHHHHHHHGGG
16264 T ss_pred --hhHhccHHHHHHHHh-cCCHHHHHHHHHHHHHHHHh
16265 Confidence 11244 55566665 55677888888888877653
16266
16267
16268 No 451
16269 >4QMJ_A Cytoskeleton-associated protein 5; PROTEIN BINDING, TOG DOMAIN; 2.498A {Homo sapiens}
16270 Probab=75.47 E-value=0.21 Score=43.16 Aligned_cols=107 Identities=13% Similarity=0.065 Sum_probs=67.9 Template_Neff=12.600
16271
16272 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
16273 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
16274 .+++.+...+.+.++.++..++.++..+........... ...+++.+...+.+.+..++..++.++..+.....
16275 T Consensus 59 ~~~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~----- 132 (240)
16276 T 4QMJ_A 59 ELPTALKGRLNDSNKILVQQTLNILQQLAVAMGPNIKQH-VKNLGIPIITVLGDSKNNVRAAALATVNAWAEQTG----- 132 (240)
16277 T ss_dssp THHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHGGGGGGG-CCCCCHHHHHGGGCSSHHHHHHHHHHHHHHHHHHC-----
16278 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhcHHHHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC-----
16279 Confidence 344555556666777888888888888876533221111 12355666666666667788888888877765422
16280
16281
16282 Q NP_000290.2 325 TRRQNGI--REAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
16283 Q Consensus 325 ll~~~IL--~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
16284 ...++ +.+...+. +.++.++..++.++..++..
16285 T Consensus 133 --~~~~~~~~~l~~~l~-~~~~~~r~~~~~~l~~l~~~ 167 (240)
16286 T 4QMJ_A 133 --MKEWLEGEDLSEELK-KENPFLRQELLGWLAEKLPT 167 (240)
16287 T ss_dssp --SHHHHSSSHHHHHHH-SSCHHHHHHHHHHHHHHGGG
16288 T ss_pred --hhHhccHHHHHHHHh-cCCHHHHHHHHHHHHHHHHh
16289 Confidence 11244 55566665 55677888888888877653
16290
16291
16292 No 452
16293 >2IX8_A ELONGATION FACTOR 3A; NUCLEOTIDE-BINDING, PROTEIN BIOSYNTHESIS, PHOSPHORYLATION, ELONGATION; 6.0A {SACCHAROMYCES CEREVISIAE}
16294 Probab=75.43 E-value=0.22 Score=54.34 Aligned_cols=153 Identities=11% Similarity=0.112 Sum_probs=91.2 Template_Neff=11.800
16295
16296 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
16297 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
16298 .++.|+..+..+.++.++..++.+|..++..... .... .-..+++.|..++.+.+..++..|+.+|..++...
16299 T Consensus 128 ~l~~l~~~l~~~~~~~vr~~al~~L~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~ 201 (976)
16300 T 2IX8_A 128 LLPHLTNAIVETNKWQEKIAILAAFSAMVDAAKD-----QVAL-RMPELIPVLSETMWDTKKEVKAAATAAMTKATETVD 201 (976)
16301 T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHSHH-----HHHH-HHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHSTTCC
16302 T ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH-----hHHh-hchhHHHHHHHhhcCCCHHHHHHHHHHHHHHHHhcC
16303 Confidence 4556666662135667778888888888754221 1111 12356777778887778888888888888877531
16304
16305
16306 Q NP_000290.2 627 -LL-H----RVMG-----------------------------NQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
16307 Q Consensus 627 -e~-~----~ll~-----------------------------~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
16308 .. . .++. ..+++.+...+.+ .++.++..++.+|..++..
16309 T Consensus 202 ~~~~~~~~~~l~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l~~~l~~------~~~~vr~~a~~~L~~l~~~ 275 (976)
16310 T 2IX8_A 202 NKDIERFIPSLIQCIADPTEVPETVHLLGATTFVAEVTPATLSIMVPLLSRGLNE------RETGIKRKSAVIIDNMCKL 275 (976)
16311 T ss_dssp SSTTCCCHHHHHHHHHCGGGHHHHHHHCSCTTCCSCCCHHHHHHHHHHHHHHHTS------SSHHHHHHHHHHHHHHHTT
16312 T ss_pred cHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhccCCchhHHHHHHHHHccCCC------CChhHHHHHHHHHHHHHHH
16313 Confidence 00 0 0000 0233344444443 3567888888888888764
16314
16315
16316 Q NP_000290.2 672 QPQLAK-QYFSSSMLNNIINLCRSSAS-PKAAEAARLLLSDMWS 713 (747)
16317 Q Consensus 672 s~e~~~-~Lve~giL~~Ll~LL~s~~d-~eVr~aAL~aLsnL~~ 713 (747)
16318 .+.... .-....+++.|...+.+. + +.++..++.+|..++.
16319 T Consensus 276 ~~~~~~~~~~~~~~~~~l~~~l~d~-~~~~vr~~a~~~l~~l~~ 318 (976)
16320 T 2IX8_A 276 VEDPQVIAPFLGKLLPGLKSNFATI-ADPEAREVTLRALKTLRR 318 (976)
16321 T ss_dssp CCCHHHHHHHHTTTHHHHHHHHHHC-CCHHHHHHHHHHHHHHHH
16322 T ss_pred cCCHHHHHHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHH
16323 Confidence 211110 001123566677777665 5 7888899999988865
16324
16325
16326 No 453
16327 >5XAH_A Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
16328 Probab=75.38 E-value=0.21 Score=46.90 Aligned_cols=162 Identities=12% Similarity=0.072 Sum_probs=86.9 Template_Neff=12.900
16329
16330 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSG--------MSQLIGLKEKGLPQIARLLQS-GNSDVVRSGASL 618 (747)
16331 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~--------~~~~llie~giI~~Ll~LL~s-~d~eVr~~AL~a 618 (747)
16332 +++.++..+. +.++.++..++.+|..++..... ... ..... .-..+++.+...+.+ .++.++..++.+
16333 T Consensus 33 i~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 109 (416)
16334 T 5XAH_A 33 VFEEVFKLLE-CPHLNVRKAAHEALGQFCCALHK-ACQSCPSEPNTAALQA-ALARVVPSYMQAVNRERERQVVMAVLEA 109 (416)
16335 T ss_dssp HHHHHHGGGS-CSCHHHHHHHHHHHHHHHHHHHH-HHTTSCCHHHHHHHHH-HHHHHHHHHHHHHTTCCCHHHHHHHHHH
16336 T ss_pred HHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH-HhccCCCCCCcHHHHH-HHHHHHHHHHHHHhhccHHHHHHHHHHH
16337 Confidence 4566667776 46778888999999888764211 000 00000 112455666666655 567788889999
16338
16339
16340 Q NP_000290.2 619 LSNMSRHPLLH-R---VMGNQVFPEVTRLLTSHTG--------------NTSNSEDILSSACYTVRNLMASQ-PQLAKQY 679 (747)
16341 Q Consensus 619 LsnLa~~~e~~-~---ll~~giI~~Ll~LL~s~s~--------------~~~~d~eVr~~Al~aLsnLa~~s-~e~~~~L 679 (747)
16342 |..++...... . .....+++.+...+..... ....++.++..++.++..++... +.....+
16343 T Consensus 110 l~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~ 189 (416)
16344 T 5XAH_A 110 LTGVLRSCGTLTLKPPGRLAELCGVLKAVLQRKTACQDTDEEEEEEDDDQAEYDAMLLEHAGEAIPALAAAAGGDSFAPF 189 (416)
16345 T ss_dssp HHHHHHHTTHHHHCSTTHHHHHHHHHHHHHTTCSTTC-------------CHHHHHHHHHHHHHHHHHHHHHTSTTTHHH
16346 T ss_pred HHHHHHHhcccccCCccHHHHHHHHHHHHHhccchhcCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHhCccchHHH
16347 Confidence 98887652111 0 1112345555555543100 00004567778888888887642 1111111
16348
16349
16350 Q NP_000290.2 680 FSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
16351 Q Consensus 680 ve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
16352 + ..+++.+...+....+..++..++.++..++.
16353 T Consensus 190 ~-~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~ 222 (416)
16354 T 5XAH_A 190 F-AGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQ 222 (416)
16355 T ss_dssp H-HHHHHHHHHTTSSSSCHHHHHHHHHHHHHHHH
16356 T ss_pred H-HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
16357 Confidence 1 13455555555433135666777777776664
16358
16359
16360 No 454
16361 >5XAH_C Importin-4; Histone, Chromatin, Assembly, PROTEIN TRANSPORT; HET: MSE; 3.004A {Homo sapiens}
16362 Probab=75.38 E-value=0.21 Score=46.90 Aligned_cols=162 Identities=12% Similarity=0.072 Sum_probs=86.9 Template_Neff=12.900
16363
16364 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSG--------MSQLIGLKEKGLPQIARLLQS-GNSDVVRSGASL 618 (747)
16365 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~--------~~~~llie~giI~~Ll~LL~s-~d~eVr~~AL~a 618 (747)
16366 +++.++..+. +.++.++..++.+|..++..... ... ..... .-..+++.+...+.+ .++.++..++.+
16367 T Consensus 33 i~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 109 (416)
16368 T 5XAH_C 33 VFEEVFKLLE-CPHLNVRKAAHEALGQFCCALHK-ACQSCPSEPNTAALQA-ALARVVPSYMQAVNRERERQVVMAVLEA 109 (416)
16369 T ss_dssp HHHHHHHGGG-SSCHHHHHHHHHHHHHHHHHHHH-HHHHSCCHHHHHHHHH-HHHHHHHHHHHHHHHCCCHHHHHHHHHH
16370 T ss_pred HHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH-HhccCCCCCCcHHHHH-HHHHHHHHHHHHHhhccHHHHHHHHHHH
16371 Confidence 4566667776 46778888999999888764211 000 00000 112455666666655 567788889999
16372
16373
16374 Q NP_000290.2 619 LSNMSRHPLLH-R---VMGNQVFPEVTRLLTSHTG--------------NTSNSEDILSSACYTVRNLMASQ-PQLAKQY 679 (747)
16375 Q Consensus 619 LsnLa~~~e~~-~---ll~~giI~~Ll~LL~s~s~--------------~~~~d~eVr~~Al~aLsnLa~~s-~e~~~~L 679 (747)
16376 |..++...... . .....+++.+...+..... ....++.++..++.++..++... +.....+
16377 T Consensus 110 l~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~ 189 (416)
16378 T 5XAH_C 110 LTGVLRSCGTLTLKPPGRLAELCGVLKAVLQRKTACQDTDEEEEEEDDDQAEYDAMLLEHAGEAIPALAAAAGGDSFAPF 189 (416)
16379 T ss_dssp HHHHHHHHGGGGSCSTTHHHHHHHHHHHHHHTCSTTTC-----------CTTHHHHHHHHHHTHHHHHHHHHTSTTTHHH
16380 T ss_pred HHHHHHHhcccccCCccHHHHHHHHHHHHHhccchhcCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHhCccchHHH
16381 Confidence 98887652111 0 1112345555555543100 00004567778888888887642 1111111
16382
16383
16384 Q NP_000290.2 680 FSSSMLNNIINLCRSSASPKAAEAARLLLSDMWS 713 (747)
16385 Q Consensus 680 ve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~ 713 (747)
16386 + ..+++.+...+....+..++..++.++..++.
16387 T Consensus 190 ~-~~~~~~l~~~l~~~~~~~~~~~~~~~l~~l~~ 222 (416)
16388 T 5XAH_C 190 F-AGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQ 222 (416)
16389 T ss_dssp H-HHHHHHHHHTTSTTSCHHHHHHHHHHHHHHHH
16390 T ss_pred H-HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
16391 Confidence 1 13455555555433135666777777776664
16392
16393
16394 No 455
16395 >5H2V_A Importin subunit beta-3, Ubiquitin-like-specific protease; nuclear import, PROTEIN TRANSPORT-HYDROLASE complex; 2.8A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
16396 Probab=75.07 E-value=0.22 Score=53.62 Aligned_cols=154 Identities=16% Similarity=0.115 Sum_probs=91.6 Template_Neff=13.000
16397
16398 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
16399 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
16400 .++.+...+. +.++.++..++.+|..++..... .... .-..+++.+...+.+.++.++..++.++..++...
16401 T Consensus 357 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 429 (1078)
16402 T 5H2V_A 357 LFQYLQQMIT-STEWRERFAAMMALSSAAEGCAD-----VLIG-EIPKILDMVIPLINDPHPRVQYGCCNVLGQISTDFS 429 (1078)
16403 T ss_dssp HHHHHHHHTT-CSCHHHHHHHHHHHHHHTTTTHH-----HHTT-SHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTT
16404 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhccHH-----HHHh-hHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhcc
16405 Confidence 4555555565 35677888888888888764321 1111 11356666777777777889999999999988652
16406
16407
16408 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
16409 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
16410 .. .......+++.+...+.+. .++.++..++.+|..++...........-..++..+...+.+. ++.++..++
16411 T Consensus 430 ~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~ 503 (1078)
16412 T 5H2V_A 430 PFIQRTAHDRILPALISKLTSE-----CTSRVQTHAAAALVNFSEFASKDILEPYLDSLLTNLLVLLQSN-KLYVQEQAL 503 (1078)
16413 T ss_dssp THHHHHHHHHHHHHHHHTTSTT-----SCHHHHHHHHHHHHHHHTTCCHHHHGGGHHHHHHHHHHHTTCS-SHHHHHHHH
16414 T ss_pred HHHHHHHHHhHHHHHHHHcccC-----CCHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHhCC-CHHHHHHHH
16415 Confidence 11 1111123555555555431 2567788888888888764321110011123455666666554 567777777
16416
16417
16418 Q NP_000290.2 706 LLLSDMWSS 714 (747)
16419 Q Consensus 706 ~aLsnL~~~ 714 (747)
16420 .++..++..
16421 T Consensus 504 ~~l~~l~~~ 512 (1078)
16422 T 5H2V_A 504 TTIAFIAEA 512 (1078)
16423 T ss_dssp HHHHHHHHH
16424 T ss_pred HHHHHHHHH
16425 Confidence 777776653
16426
16427
16428 No 456
16429 >6OWT_A AP-2 complex subunit alpha, AP-2; AP, HIV, Nef, trafficking, Protein;{Rattus norvegicus}
16430 Probab=74.95 E-value=0.24 Score=54.59 Aligned_cols=140 Identities=16% Similarity=0.153 Sum_probs=90.7 Template_Neff=11.000
16431
16432 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
16433 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
16434 +++.++.++. +.+...+..+..++..+...... ....++..|...+.+.++.++..|+.+|+++.....
16435 T Consensus 75 ~~~~l~~ll~-s~~~~~r~~~~~~l~~l~~~~~~----------~~~~ii~~l~~~l~~~~~~vr~~Al~~l~~~~~~~~ 143 (939)
16436 T 6OWT_A 75 GHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSE----------LIRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 143 (939)
16437 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHccCChH----------HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCHHH
16438 Confidence 3455666776 46667777777777777653221 112456667777777888899999999888764311
16439
16440
16441 Q NP_000290.2 628 LHRVMGNQVFPEVTRLL--TSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
16442 Q Consensus 628 ~~~ll~~giI~~Ll~LL--~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
16443 ...+++.+..++ .+ .++.++..++.+|..+....+... .....++.|..++.+. +..++..++
16444 T Consensus 144 -----~~~l~~~l~~~l~~~~------~~~~vR~~a~~~L~~l~~~~~~~~---~~~~~~~~l~~lL~d~-~~~vr~~a~ 208 (939)
16445 T 6OWT_A 144 -----AEAFAGEIPKILVAGD------TMDSVKQSAALCLLRLYRTSPDLV---PMGDWTSRVVHLLNDQ-HLGVVTAAT 208 (939)
16446 T ss_pred -----HHHHHHHHHHHHcCCC------CCHHHHHHHHHHHHHHHHHCchhc---ChhhHHHHHHHHhcCC-CHHHHHHHH
16447 Confidence 112444555555 33 367889999999999876433221 1234567777777765 677888888
16448
16449
16450 Q NP_000290.2 706 LLLSDMWS 713 (747)
16451 Q Consensus 706 ~aLsnL~~ 713 (747)
16452 .+|..+..
16453 T Consensus 209 ~~L~~l~~ 216 (939)
16454 T 6OWT_A 209 SLITTLAQ 216 (939)
16455 T ss_pred HHHHHHHH
16456 Confidence 88877765
16457
16458
16459 No 457
16460 >4G3A_B CLIP-associating protein; TOG domain, HEAT repeat, MAP; HET: GOL; 1.994A {Drosophila melanogaster}
16461 Probab=74.93 E-value=0.22 Score=42.89 Aligned_cols=107 Identities=15% Similarity=0.166 Sum_probs=71.3 Template_Neff=12.600
16462
16463 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIA-RLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
16464 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll-~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
16465 .++.++..+. +.+..++..++.+|..+...... ....+++.+. .++.+.++.++..++.++..++...
16466 T Consensus 91 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~~~----------~~~~~~~~l~~~~l~~~~~~~r~~a~~~l~~l~~~~ 159 (237)
16467 T 4G3A_B 91 VLPHVIDRLG-DSRDTVREKAQLLLRDLMEHRVL----------PPQALIDKLATSCFKHKNAKVREEFLQTIVNALHEY 159 (237)
16468 T ss_dssp HHHHHHHHHT-CSCHHHHHHHHHHHHHHHHTTSS----------CHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHH
16469 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHHcCCC----------CHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHh
16470 Confidence 5666777776 35667788888888888753111 0123556666 6777777888999999998887652
16471
16472
16473 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS 671 (747)
16474 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~ 671 (747)
16475 .........+++.+...+.+ .++.++..++.++..+...
16476 T Consensus 160 ~~~~~~~~~~~~~l~~~l~~------~~~~vr~~a~~~l~~l~~~ 198 (237)
16477 T 4G3A_B 160 GTQQLSVRVYIPPVCALLGD------PTVNVREAAIQTLVEIYKH 198 (237)
16478 T ss_dssp HHHHCCCGGGHHHHHHHTTC------SSHHHHHHHHHHHHHHHHH
16479 T ss_pred CCccccHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHHHHH
16480 Confidence 11111113456667777765 3678899999999988764
16481
16482
16483 No 458
16484 >4XL5_C Green fluorescent protein, bGFP-A; AlphaRep Scaffold, Complex, EGFP, PROTEIN; HET: CRO; 2.0A {Aequorea victoria}
16485 Probab=74.58 E-value=0.23 Score=43.80 Aligned_cols=121 Identities=12% Similarity=0.165 Sum_probs=73.5 Template_Neff=12.400
16486
16487 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
16488 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
16489 .++.+...+. +.++.++..++.++..+... ..++.+...+.+.++.++..++.+|..+...
16490 T Consensus 139 ~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~----------------~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~-- 199 (263)
16491 T 4XL5_C 139 AVEPLIKALK-DEDPWVRLTAARALGQIGDE----------------RAVEPLIKALKDEDASVRKAAAVALGQIGDE-- 199 (263)
16492 T ss_dssp GHHHHHHHTT-CSSHHHHHHHHHHHHHHCCG----------------GGHHHHHHHTTCSSHHHHHHHHHHHHHHCCG--
16493 T ss_pred hHHHHHHHhh-CCCHHHHHHHHHHHHhhCCH----------------HHHHHHHHHhcCCCHHHHHHHHHHHHHhCCh--
16494 Confidence 4455666666 35667777777777655431 2234455566666677788888877766431
16495
16496
16497 Q NP_000290.2 628 LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 707 (747)
16498 Q Consensus 628 ~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~a 707 (747)
16499 ..++.+..++.+ .+..++..++.+|..+... ...+.+..++.+. ++.++..++.+
16500 T Consensus 200 -------~~~~~l~~~l~~------~~~~~~~~a~~~l~~~~~~-----------~~~~~l~~~~~~~-~~~vr~~a~~~ 254 (263)
16501 T 4XL5_C 200 -------RAVEPLIKALKD------EDEYVRQRAASALGKIGGE-----------RVRAAMEKLAEPA-PGFARKVAVNY 254 (263)
16502 T ss_dssp -------GGHHHHHHHTTC------SSHHHHHHHHHHHHHHCHH-----------HHHHHHHHHTTTC-CHHHHHHHHHH
16503 T ss_pred -------hhHHHHHHHhcC------CCHHHHHHHHHHHHhhCcH-----------HHHHHHHHHhcCC-CcHHHHHHHHH
16504 Confidence 234455555554 2566777888888776542 2334444555544 66788888888
16505
16506
16507 Q NP_000290.2 708 LSDMW 712 (747)
16508 Q Consensus 708 LsnL~ 712 (747)
16509 |..+.
16510 T Consensus 255 l~~~~ 259 (263)
16511 T 4XL5_C 255 LETHK 259 (263)
16512 T ss_dssp HHHCC
16513 T ss_pred HHHHH
16514 Confidence 77654
16515
16516
16517 No 459
16518 >4FDD_A Transportin-1, RNA-binding protein FUS; HEAT repeats, Karyopherin, nuclear import; 2.3A {Homo sapiens}
16519 Probab=74.48 E-value=0.23 Score=51.35 Aligned_cols=155 Identities=9% Similarity=0.106 Sum_probs=92.6 Template_Neff=13.300
16520
16521 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIG--LKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
16522 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~ll--ie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
16523 .++.+...+. +.++.++..++.+|..+...... ......+ .-..+++.+...+.+.++.++..++.+|..++..
16524 T Consensus 129 ~~~~l~~~l~-~~~~~~~~~al~~l~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 204 (852)
16525 T 4FDD_A 129 LLPKLCSLLD-SEDYNTCEGAFGALQKICEDSAE---ILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIIS 204 (852)
16526 T ss_dssp HHHHHHHHHS-CSSHHHHHHHHHHHHHHHHHHTT---HHHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTT
16527 T ss_pred HHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHh---hcchhhccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
16528 Confidence 3455555565 35667777888888877753210 0000000 1134566677777777788899999999888765
16529
16530
16531 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
16532 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
16533 ... .......+++.+...+.+ .++.++..++.++..+....+....... ..+++.+...+.+. ++.++..+
16534 T Consensus 205 ~~~~~~~~~~~~~~~l~~~l~~------~~~~~r~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~v~~~a 276 (852)
16535 T 4FDD_A 205 RTQALMLHIDSFIENLFALAGD------EEPEVRKNVCRALVMLLEVRMDRLLPHM-HNIVEYMLQRTQDQ-DENVALEA 276 (852)
16536 T ss_dssp TCHHHHTSHHHHHHHHHHHHTC------CCHHHHHHHHHHHHHHHHHCHHHHGGGH-HHHHHHHHHHHTCS-SHHHHHHH
16537 T ss_pred hHHHHHHhHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHcHHHHHHhH-HHHHHHHHHhcCCC-CHHHHHHH
16538 Confidence 211 111112355556666654 3567888899999888765332211111 23456666666655 67788888
16539
16540
16541 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
16542 Q Consensus 705 L~aLsnL~~~ 714 (747)
16543 +.+|..++..
16544 T Consensus 277 ~~~l~~l~~~ 286 (852)
16545 T 4FDD_A 277 CEFWLTLAEQ 286 (852)
16546 T ss_dssp HHHHHHHTTS
16547 T ss_pred HHHHHHHhcC
16548 Confidence 8888887754
16549
16550
16551 No 460
16552 >4D4Z_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE, EIF-5A, HYPUSINE; HET: B3P, GOL; 1.7A {HOMO SAPIENS}
16553 Probab=74.40 E-value=0.23 Score=44.22 Aligned_cols=124 Identities=11% Similarity=0.101 Sum_probs=69.5 Template_Neff=12.700
16554
16555 Q NP_000290.2 546 SDAIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
16556 Q Consensus 546 ~G~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
16557 ...++.|...+. +.+ +.++..++.+|..+.. ...++.+...+.+.++.++..++.+|..+.
16558 T Consensus 9 ~~~~~~l~~~l~-~~~~~~~~r~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~ 71 (294)
16559 T 4D4Z_A 9 EQEVDAIGQTLV-DPKQPLQARFRALFTLRGLGG----------------PGAIAWISQAFDDDSALLKHELAYCLGQMQ 71 (294)
16560 T ss_dssp HHHHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCS----------------HHHHHHHHHGGGCSCHHHHHHHHHHHHHHT
16561 T ss_pred HHHHHHHHHHHc-CCCCCHHHHHHHHHHHHhhcC----------------hhHHHHHHHHhCCCCHHHHHHHHHHHHhcC
16562 Confidence 345666777776 344 4577777777766532 123445556666667777888877777664
16563
16564
16565 Q NP_000290.2 624 RHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
16566 Q Consensus 624 ~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
16567 .. ..++.+..++.+. ..++.++..++.+|..+... ..++.+...+.+. ++.++..
16568 T Consensus 72 ~~---------~~~~~l~~~l~~~----~~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~v~~~ 126 (294)
16569 T 4D4Z_A 72 DA---------RAIPMLVDVLQDT----RQEPMVRHEAGEALGAIGDP-----------EVLEILKQYSSDP-VIEVAET 126 (294)
16570 T ss_dssp CG---------GGHHHHHHHHHCT----TSCHHHHHHHHHHHHHHCCG-----------GGHHHHHHHTTCS-SHHHHHH
16571 T ss_pred Cc---------chHHHHHHHhhCC----CCCHHHHHHHHHHHHHhCCH-----------HHHHHHHHHccCC-CchHHHH
16572 Confidence 31 2334455555441 01456777777777766431 1233444445444 5556666
16573
16574
16575 Q NP_000290.2 704 ARLLLSDM 711 (747)
16576 Q Consensus 704 AL~aLsnL 711 (747)
16577 ++.++..+
16578 T Consensus 127 a~~~l~~~ 134 (294)
16579 T 4D4Z_A 127 CQLAVRRL 134 (294)
16580 T ss_dssp HHHHHHHH
16581 T ss_pred HHHHHHHH
16582 Confidence 65555544
16583
16584
16585 No 461
16586 >4D50_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE; HET: GAI; 1.7A {HOMO SAPIENS}
16587 Probab=74.40 E-value=0.23 Score=44.22 Aligned_cols=124 Identities=11% Similarity=0.101 Sum_probs=69.5 Template_Neff=12.700
16588
16589 Q NP_000290.2 546 SDAIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
16590 Q Consensus 546 ~G~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
16591 ...++.|...+. +.+ +.++..++.+|..+.. ...++.+...+.+.++.++..++.+|..+.
16592 T Consensus 9 ~~~~~~l~~~l~-~~~~~~~~r~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~ 71 (294)
16593 T 4D50_A 9 EQEVDAIGQTLV-DPKQPLQARFRALFTLRGLGG----------------PGAIAWISQAFDDDSALLKHELAYCLGQMQ 71 (294)
16594 T ss_dssp HHHHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCS----------------HHHHHHHHHGGGSSCHHHHHHHHHHHHHHT
16595 T ss_pred HHHHHHHHHHHc-CCCCCHHHHHHHHHHHHhhcC----------------hhHHHHHHHHhCCCCHHHHHHHHHHHHhcC
16596 Confidence 345666777776 344 4577777777766532 123445556666667777888877777664
16597
16598
16599 Q NP_000290.2 624 RHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEA 703 (747)
16600 Q Consensus 624 ~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~a 703 (747)
16601 .. ..++.+..++.+. ..++.++..++.+|..+... ..++.+...+.+. ++.++..
16602 T Consensus 72 ~~---------~~~~~l~~~l~~~----~~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~v~~~ 126 (294)
16603 T 4D50_A 72 DA---------RAIPMLVDVLQDT----RQEPMVRHEAGEALGAIGDP-----------EVLEILKQYSSDP-VIEVAET 126 (294)
16604 T ss_dssp CG---------GGHHHHHHHHHCT----TSCHHHHHHHHHHHHHHCCG-----------GGHHHHHHHTTCS-SHHHHHH
16605 T ss_pred Cc---------chHHHHHHHhhCC----CCCHHHHHHHHHHHHHhCCH-----------HHHHHHHHHccCC-CchHHHH
16606 Confidence 31 2334455555441 01456777777777766431 1233444445444 5556666
16607
16608
16609 Q NP_000290.2 704 ARLLLSDM 711 (747)
16610 Q Consensus 704 AL~aLsnL 711 (747)
16611 ++.++..+
16612 T Consensus 127 a~~~l~~~ 134 (294)
16613 T 4D50_A 127 CQLAVRRL 134 (294)
16614 T ss_dssp HHHHHHHH
16615 T ss_pred HHHHHHHH
16616 Confidence 65555544
16617
16618
16619 No 462
16620 >6QH5_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
16621 Probab=74.19 E-value=0.24 Score=50.25 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=49.1 Template_Neff=12.200
16622
16623 Q NP_000290.2 548 AIRTYLNLM--GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
16624 Q Consensus 548 ~I~~LL~LL--~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
16625 .++.+...+ . +.++.++..++.+|..+....+. .......++.+..++.+.++.++..++.+|..+...
16626 T Consensus 147 l~~~l~~~l~~~-~~~~~vr~~a~~~L~~l~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~L~~l~~~ 217 (621)
16627 T 6QH5_A 147 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRTSPD--------LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 217 (621)
16628 T ss_pred HHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHhChH--------HccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
16629 Confidence 355566666 5 46778888999999988764221 111245677788888888888999999999888764
16630
16631
16632 No 463
16633 >5LPH_B Centrosomal protein of 104 kDa; TOG domain, HEAT repeat, Tubulin; HET: MSE; 2.25A {Homo sapiens}
16634 Probab=74.03 E-value=0.26 Score=45.88 Aligned_cols=155 Identities=10% Similarity=0.057 Sum_probs=88.9 Template_Neff=10.900
16635
16636 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLM---SSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
16637 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~---s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
16638 ++.+...+. +.+..++..++.++..++...... ... .... .-..+++.|+..+.+.++.++..+..+|..++..
16639 T Consensus 94 ~~~l~~~l~-d~~~~v~~~a~~~l~~l~~~~~~~~~~~~~-~~~~-~l~~ll~~ll~~l~d~~~~vr~~a~~~l~~l~~~ 170 (288)
16640 T 5LPH_B 94 VFLVRRAIK-DIVTSVFQASLKLLKMIITQYIPKHKLSKL-ETAH-CVERTIPVLLTRTGDSSARLRVTAANFIQEMALF 170 (288)
16641 T ss_pred HHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHcccCCCCHH-HHHH-HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHcC
16642 Confidence 444555565 466778888888888776532000 000 0011 1234667777777777788888899888888765
16643
16644
16645 Q NP_000290.2 626 PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
16646 Q Consensus 626 ~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
16647 ..... ...++..+...+... .++.++..++.+|..++...........-..+++.+...+.+. +..+|..+.
16648 T Consensus 171 ~~~~~--~~~v~~~l~~~l~~~-----~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~i~~~l~~~l~~~-~~~VR~~a~ 242 (288)
16649 T 5LPH_B 171 KEVKS--LQIIPSYLVQPLKAN-----SSVHLAMSQMGLLARLLKDLGTGSSGFTIDNVMKFSVSALEHR-VYEVRETAV 242 (288)
16650 T ss_pred CCCCc--hhhHHHHHhhccccC-----CCHHHHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHhCCC-CHHHHHHHH
16651 Confidence 21100 011223332333321 2466777788888877654322111111224567777777766 789999999
16652
16653
16654 Q NP_000290.2 706 LLLSDMWSS 714 (747)
16655 Q Consensus 706 ~aLsnL~~~ 714 (747)
16656 .++..+...
16657 T Consensus 243 ~~l~~l~~~ 251 (288)
16658 T 5LPH_B 243 RIILDMYRQ 251 (288)
16659 T ss_pred HHHHHHHHH
16660 Confidence 998887653
16661
16662
16663 No 464
16664 >1QBK_B STRUCTURE OF THE KARYOPHERIN BETA2-RAN; HEAT REPEATS, NUCLEAR TRANSPORT PROTEIN; HET: GNP; 3.0A {Homo sapiens} SCOP: a.118.1.1
16665 Probab=73.90 E-value=0.24 Score=51.58 Aligned_cols=156 Identities=9% Similarity=0.104 Sum_probs=93.2 Template_Neff=13.200
16666
16667 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLI--GLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
16668 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~l--lie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
16669 .++.+...+. +.++.++..++.+|..++..... ...... -.-..+++.+...+.+.++.++..++.+|..+...
16670 T Consensus 129 ~~~~l~~~l~-~~~~~~~~~al~~l~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 204 (890)
16671 T 1QBK_B 129 LLPKLCSLLD-SEDYNTCEGAFGALQKICEDSAE---ILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIIS 204 (890)
16672 T ss_pred HHHHHHHHhc-CCChhHHHHHHHHHHHHHHHHHH---hcchhhccHhHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
16673 Confidence 4555666665 35667777888888887754221 000000 01134566677777777788899999999988765
16674
16675
16676 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
16677 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
16678 ... .......+++.+...+.+ .+..++..++.+|..++...+....... ..+++.+...+.+. ++.++..+
16679 T Consensus 205 ~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~v~~~a 276 (890)
16680 T 1QBK_B 205 RTQALMLHIDSFTENLFALAGD------EEPEVRKNVCRALVMLLEVRMDRLLPHM-HNIVEYMLQRTQDQ-DENVALEA 276 (890)
16681 T ss_pred hcHHHHHcHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHhCHHHHHHhH-HHHHHHHHHHhcCC-CHHHHHHH
16682 Confidence 211 111112345555555554 2567788888888888765332221111 23456666666655 67788888
16683
16684
16685 Q NP_000290.2 705 RLLLSDMWSSK 715 (747)
16686 Q Consensus 705 L~aLsnL~~~~ 715 (747)
16687 +.++..+....
16688 T Consensus 277 ~~~l~~l~~~~ 287 (890)
16689 T 1QBK_B 277 CEFWLTLAEQP 287 (890)
16690 T ss_pred HHHHHHHhcCh
16691 Confidence 88888887653
16692
16693
16694 No 465
16695 >3W3W_A Importin subunit beta-3, Protein STE12; HEAT repeat, nuclear import, PROTEIN; 2.2A {Saccharomyces cerevisiae}
16696 Probab=73.86 E-value=0.24 Score=53.17 Aligned_cols=153 Identities=16% Similarity=0.154 Sum_probs=90.7 Template_Neff=13.000
16697
16698 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH-P 626 (747)
16699 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~-~ 626 (747)
16700 .++.+...+. +.++.++..++.+|..++..... .... .-..+++.+...+.+.++.++..++.++..++.. .
16701 T Consensus 357 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~-~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 429 (1078)
16702 T 3W3W_A 357 LFQYLQQMIT-STEWRERFAAMMALSSAAEGCAD-----VLIG-EIPKILDMVIPLINDPHPRVQYGCCNVLGQISTDFS 429 (1078)
16703 T ss_dssp HHHHHHHHHT-CSCHHHHHHHHHHHHHHTTTTHH-----HHTT-CHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHTT
16704 T ss_pred HHHHHHHHhc-CCCHHHHHHHHHHHHHHHhccHH-----HHHh-hHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcc
16705 Confidence 4455555555 35677888888888888764221 1111 1135666677777777788999999999998865 1
16706
16707
16708 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
16709 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
16710 .. .......+++.+...+.+. .+..++..++.+|..++..... ..... -..++..+...+.+. +..++..+
16711 T Consensus 430 ~~~~~~~~~~~~~~l~~~l~~~-----~~~~~r~~a~~~l~~l~~~~~~~~~~~~-~~~i~~~l~~~l~~~-~~~~~~~~ 502 (1078)
16712 T 3W3W_A 430 PFIQRTAHDRILPALISKLTSE-----CTSRVQTHAAAALVNFSEFASKDILEPY-LDSLLTNLLVLLQSN-KLYVQEQA 502 (1078)
16713 T ss_dssp THHHHHHHHHHHHHHHHHTSTT-----SCHHHHHHHHHHHHHHHHTCCHHHHGGG-HHHHHHHHHHHHTCS-SHHHHHHH
16714 T ss_pred HHHHHHHHHHHHHHHHHHcccC-----CCHHHHHHHHHHHHHHHhcCChhhHHHH-HHHHHHHHHHHHhcC-CHHHHHHH
16715 Confidence 11 1011123555555555431 2567788888888888764321 11111 123455666666544 56677777
16716
16717
16718 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
16719 Q Consensus 705 L~aLsnL~~~ 714 (747)
16720 +.++..++..
16721 T Consensus 503 ~~~l~~l~~~ 512 (1078)
16722 T 3W3W_A 503 LTTIAFIAEA 512 (1078)
16723 T ss_dssp HHHHHHHHHH
16724 T ss_pred HHHHHHHHHH
16725 Confidence 7777776643
16726
16727
16728 No 466
16729 >1IBR_B RAN IMPORTIN BETA SUBUNIT; SMALL GTPASE NUCLEAR TRANSPORT; HET: GNP; 2.3A {Homo sapiens} SCOP: a.118.1.1
16730 Probab=73.63 E-value=0.25 Score=47.09 Aligned_cols=158 Identities=12% Similarity=0.052 Sum_probs=89.8 Template_Neff=12.900
16731
16732 Q NP_000290.2 547 DAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSS------G-MSQLIGLKEKGLPQIARLLQSGNSDVVRSGASL 618 (747)
16733 Q Consensus 547 G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~------~-~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~a 618 (747)
16734 +.++.++.++.+. .++.++..|+.+|.++...... .. . .....-....+.+.++..+.+. +.++..++.+
16735 T Consensus 35 ~~~~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~l~~~-~~~~~~~~~~ 112 (462)
16736 T 1IBR_B 35 TFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDP-DIKAQYQQRWLAIDANARREVKNYVLQTLGTE-TYRPSSASQC 112 (462)
16737 T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSH-HHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCC-CSSSCSHHHH
16738 T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhcCCH-HHHHHHHHhHhcCCHHHHHHHHHHHHHHHCCC-CCChhHHHHH
16739 Confidence 4566677777621 3567888888888887653210 00 0 0000001123445555555442 3457777788
16740
16741
16742 Q NP_000290.2 619 LSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNS--EDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
16743 Q Consensus 619 LsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d--~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
16744 ++.++...... .....+++.+...+.+ .+ +.++..++.+|..+...............+++.+...+.+.
16745 T Consensus 113 l~~l~~~~~~~-~~~~~~~~~l~~~l~~------~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 184 (462)
16746 T 1IBR_B 113 VAGIACAEIPV-NQWPELIPQLVANVTN------PNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKE- 184 (462)
16747 T ss_dssp HHHHHHHHGGG-TCCTTHHHHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTT-
16748 T ss_pred HHHHHhhcCCh-hhcccHHHHHHHHhhC------CCCchHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC-
16749 Confidence 88777541110 0112356666666665 23 67888899999888764322111111224567777777765
16750
16751
16752 Q NP_000290.2 697 S--PKAAEAARLLLSDMWSS 714 (747)
16753 Q Consensus 697 d--~eVr~aAL~aLsnL~~~ 714 (747)
16754 + ..++..++.++..++..
16755 T Consensus 185 ~~~~~vr~~a~~~l~~l~~~ 204 (462)
16756 T 1IBR_B 185 EPSNNVKLAATNALLNSLEF 204 (462)
16757 T ss_dssp CCCHHHHHHHHHHHHHHTTT
16758 T ss_pred CCCHHHHHHHHHHHHHHHHH
16759 Confidence 4 78889999999888654
16760
16761
16762 No 467
16763 >5VCH_A Kap123; Bidding yeast karyopherin, 23 HEAT; HET: MSE; 2.35A {Kluyveromyces lactis}
16764 Probab=73.42 E-value=0.26 Score=53.37 Aligned_cols=153 Identities=15% Similarity=0.124 Sum_probs=92.7 Template_Neff=12.900
16765
16766 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
16767 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
16768 .++.+...+. +.++.++..++.+|..++..... ..... -..+++.+...+.+.++.++..++.++..++...
16769 T Consensus 361 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 433 (1116)
16770 T 5VCH_A 361 IIEHLPTMLS-SSNPFERRSILLAISVLVTGSPD-----YTLSQ-FDKIIPATVTGLKDSEAVVQLAALKCIVQLSTNLQ 433 (1116)
16771 T ss_dssp HHHHHHHHHH-CSCHHHHHHHHHHHHHHTTTCHH-----HHHHT-HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSH
16772 T ss_pred HHHHHHHHhh-CCCHHHHHHHHHHHHHHHhcCHH-----HHHHh-HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcH
16773 Confidence 4555566665 35677788888888888764321 11111 1356677777777777889999999999888652
16774
16775
16776 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINLCRS-SASPKAAEAA 704 (747)
16777 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~LL~s-~~d~eVr~aA 704 (747)
16778 .........+++.+...+... .+..++..++.+|..++..... ...... ..+++.+...+.+ . ++.++..+
16779 T Consensus 434 ~~~~~~~~~~~~~l~~~l~~~-----~~~~v~~~a~~~l~~l~~~~~~~~~~~~~-~~~~~~l~~~l~~~~-~~~~~~~~ 506 (1116)
16780 T 5VCH_A 434 DEVARYHEQYLPLVIDIIDSA-----KHVVIYKYATLALDGLLEFIAHNDIIKYL-DPLMNKLFQMLETQQ-SPKLRAAI 506 (1116)
16781 T ss_dssp HHHHTTHHHHHHHHHHHHHTC-----CSHHHHHHHHHHHHHHHHTSCHHHHHHHH-HHHHHHHHHHHHHCC-CHHHHHHH
16782 T ss_pred HHHHHHHHHHHHHHHHHhccC-----CCHHHHHHHHHHHHHHHhhCCHhhHHHHH-HHHHHHHHHHHhcCC-CHHHHHHH
16783 Confidence 111111123555566665541 2567788888888888764222 111111 2356666666665 3 56777778
16784
16785
16786 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
16787 Q Consensus 705 L~aLsnL~~~ 714 (747)
16788 +.++..++..
16789 T Consensus 507 ~~~l~~l~~~ 516 (1116)
16790 T 5VCH_A 507 VSAIGSCAFA 516 (1116)
16791 T ss_dssp HHHHHHHHHH
16792 T ss_pred HHHHHHHHHH
16793 Confidence 8888777653
16794
16795
16796 No 468
16797 >6QH7_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: SEP; 3.4A {Rattus norvegicus}
16798 Probab=73.36 E-value=0.26 Score=49.97 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=49.2 Template_Neff=12.200
16799
16800 Q NP_000290.2 548 AIRTYLNLM--GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
16801 Q Consensus 548 ~I~~LL~LL--~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
16802 .++.+...+ . +.++.++..++.+|..+....+. .......++.|..++.+.++.++..++.+|..+...
16803 T Consensus 147 l~~~l~~~l~~~-~~~~~vr~~a~~~L~~~~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 217 (621)
16804 T 6QH7_A 147 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRTSPD--------LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 217 (621)
16805 T ss_dssp HTTHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHCGG--------GCCCCTTHHHHHHGGGCSSHHHHHHHHHHHHHHHTT
16806 T ss_pred HHhhHHHHHHcC-CCCHHHHHHHHHHHHHHHHHChh--------hcCccchHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
16807 Confidence 455566666 5 46778888999999988764221 111245677788888888888999999999888764
16808
16809
16810 No 469
16811 >2JKT_A AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ALTERNATIVE SPLICING, PHOSPHOPROTEIN, PHOSPHORYLATION, PROTEIN; HET: SEP, SO4; 3.4A {MUS MUSCULUS}
16812 Probab=73.28 E-value=0.27 Score=49.85 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=49.0 Template_Neff=12.300
16813
16814 Q NP_000290.2 548 AIRTYLNLM--GKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
16815 Q Consensus 548 ~I~~LL~LL--~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
16816 .++.+...+ . +.++.++..++.+|..+....+. .......++.|..++.+.++.++..++.+|..+...
16817 T Consensus 147 l~~~l~~~l~~~-~~~~~vr~~a~~~L~~~~~~~~~--------~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 217 (623)
16818 T 2JKT_A 147 FAGEIPKILVAG-DTMDSVKQSAALCLLRLYRTSPD--------LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 217 (623)
16819 T ss_dssp HTTHHHHHHHCT-TSCHHHHHHHHHHHHHHHHHCTT--------TCCCCTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTT
16820 T ss_pred HHHhHHHHHHcC-CCCHHHHHHHHHHHHHHHHHChh--------hcCccchHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
16821 Confidence 345566666 5 46778888999999888764221 111245677888888888888999999999888764
16822
16823
16824 No 470
16825 >1GCJ_B IMPORTIN-BETA; HEAT REPEAT MOTIF, NUCLEAR PORE-TARGETING; HET: MSE; 2.6A {Mus musculus} SCOP: a.118.1.1
16826 Probab=73.02 E-value=0.27 Score=46.99 Aligned_cols=158 Identities=12% Similarity=0.055 Sum_probs=87.6 Template_Neff=12.800
16827
16828 Q NP_000290.2 547 DAIRTYLNLMGKS-KKDATLEACAGALQNLTASKGLMSS------G-MSQLIGLKEKGLPQIARLLQSGNSDVVRSGASL 618 (747)
16829 Q Consensus 547 G~I~~LL~LL~ss-~d~eVr~~AL~aL~nLs~~s~~~s~------~-~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~a 618 (747)
16830 +.+..++..+.++ .+..++..|+.+|.++...... .. . .....-....+.+.|+..+.+. ..++..++.+
16831 T Consensus 41 ~~~~~l~~~l~~~~~~~~~r~~a~~~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~l~~~l~~~l~~~-~~~r~~~~~~ 118 (460)
16832 T 1GCJ_B 41 TFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDP-DIKAQYQQRWLAIDANARREVKNYVLQTLGTE-TYRPSSASQC 118 (460)
16833 T ss_dssp HHHHHHHHHHSCTTSCHHHHHHHHHHHHTTTCCSSH-HHHHHHHHHHHHSCHHHHHHHHHHHHHHTTCC-CSSSCHHHHH
16834 T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHcCC-CCChhHHHHH
16835 Confidence 3455666666521 2456777777888876643110 00 0 0000001233455566666543 3477778888
16836
16837
16838 Q NP_000290.2 619 LSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNS--EDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSA 696 (747)
16839 Q Consensus 619 LsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d--~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~ 696 (747)
16840 +..++...... .....+++.+...+.+ .+ +.++..++.+|..+...............+++.+...+.+.
16841 T Consensus 119 l~~l~~~~~~~-~~~~~~~~~l~~~l~~------~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 190 (460)
16842 T 1GCJ_B 119 VAGIACAEIPV-SQWPELIPQLVANVTN------PNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKE- 190 (460)
16843 T ss_dssp HHHHHHHHGGG-TCCTTHHHHHHHHHHC------TTCCHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHCTT-
16844 T ss_pred HHHHHHHhCCc-cccchHHHHHHHHhhC------CCCcHHHHHHHHHHHHHHhhhCCHHHhHHHHHHHHHHHHHHHhCC-
16845 Confidence 88777541111 0112356666666665 23 67888899999888764221111111224566777777655
16846
16847
16848 Q NP_000290.2 697 S--PKAAEAARLLLSDMWSS 714 (747)
16849 Q Consensus 697 d--~eVr~aAL~aLsnL~~~ 714 (747)
16850 + ..++..++.++..+...
16851 T Consensus 191 ~~~~~vr~~a~~~l~~~~~~ 210 (460)
16852 T 1GCJ_B 191 EPSNNVKLAATNALLNSLEF 210 (460)
16853 T ss_dssp CSCHHHHHHHHHHHHHHTTT
16854 T ss_pred CCCHHHHHHHHHHHHHHHHH
16855 Confidence 4 78888888888887653
16856
16857
16858 No 471
16859 >1OYZ_A X-RAY STRUCTURE OF YB61_HAEIN NORTHEAST; STRUCTURAL GENOMICS, PSI, Protein Structure; 2.1A {Escherichia coli} SCOP: a.118.1.16
16860 Probab=72.96 E-value=0.27 Score=43.42 Aligned_cols=121 Identities=14% Similarity=0.056 Sum_probs=74.4 Template_Neff=12.700
16861
16862 Q NP_000290.2 547 DAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP 626 (747)
16863 Q Consensus 547 G~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~ 626 (747)
16864 ..++.+...+. +.++.++..++.++..+.... ...++.+...+.+.++.++..++.+|..+...
16865 T Consensus 159 ~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~~~~--------------~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~~- 222 (280)
16866 T 1OYZ_A 159 ATIPLLINLLK-DPNGDVRNWAAFAININKYDN--------------SDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDK- 222 (280)
16867 T ss_dssp CCHHHHHHHHT-CSSHHHHHHHHHHHHHHTCCC--------------HHHHHHHHHHTTCSCHHHHHHHHHHHHHTTCG-
16868 T ss_pred hhHHHHHHHHc-CCCHHHHHHHHHHHHhhcCCC--------------hHHHHHHHHHhcCCCHHHHHHHHHHHhccCCh-
16869 Confidence 34566677776 356677777777776553321 13455566667777778888888888776532
16870
16871
16872 Q NP_000290.2 627 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARL 706 (747)
16873 Q Consensus 627 e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~ 706 (747)
16874 ..++.+...+.+ +.++..++.+|..+... ..++.|...+.+..++.++..++.
16875 T Consensus 223 --------~~~~~l~~~l~~--------~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~~~~~vr~~a~~ 275 (280)
16876 T 1OYZ_A 223 --------RVLSVLCDELKK--------NTVYDDIIEAAGELGDK-----------TLLPVLDTMLYKFDDNEIITSAID 275 (280)
16877 T ss_dssp --------GGHHHHHHHHTS--------SSCCHHHHHHHHHHCCG-----------GGHHHHHHHHTTSSCCHHHHHHHH
16878 T ss_pred --------hHHHHHHHHhCC--------ccHHHHHHHHHHHhcch-----------hHHHHHHHHHhcCCCHHHHHHHHH
16879 Confidence 234444455543 25677777777776531 245566666665226677888877
16880
16881
16882 Q NP_000290.2 707 LLSD 710 (747)
16883 Q Consensus 707 aLsn 710 (747)
16884 +|..
16885 T Consensus 276 ~l~~ 279 (280)
16886 T 1OYZ_A 276 KLKR 279 (280)
16887 T ss_dssp HHTC
16888 T ss_pred HHhc
16889 Confidence 7764
16890
16891
16892 No 472
16893 >2JKT_A AP-2 COMPLEX SUBUNIT ALPHA-2, AP-2; ALTERNATIVE SPLICING, PHOSPHOPROTEIN, PHOSPHORYLATION, PROTEIN; HET: SEP, SO4; 3.4A {MUS MUSCULUS}
16894 Probab=72.80 E-value=0.28 Score=49.69 Aligned_cols=67 Identities=12% Similarity=0.101 Sum_probs=35.9 Template_Neff=12.300
16895
16896 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNMS 623 (747)
16897 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsnLa 623 (747)
16898 .++.+..++. +.+..++..++.+|..+...... ... -...++.++..+. +.++.++..++.+|..+.
16899 T Consensus 330 ~~~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~------~~~--~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~ 397 (623)
16900 T 2JKT_A 330 ACNQLGQFLQ-HRETNLRYLALESMCTLASSEFS------HEA--VKTHIETVINALKTERDVSVRQRAVDLLYAMC 397 (623)
16901 T ss_dssp HHHHHHHHHH-SSCSHHHHHHHHHHHHHTTCSSS------CSG--GGGGHHHHHHHHHHCCSHHHHHHHHHHHHTTC
16902 T ss_pred HHHHHHHHhh-CCCchHHHHHHHHHHHHHcCcCC------HHH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc
16903 Confidence 3455556665 35566677777777766643210 011 1123445555555 555666666666666653
16904
16905
16906 No 473
16907 >5VE8_B Kap123, Histone H3; Bidding yeast karyopherin, 23 HEAT; HET: MSE; 2.7A {Kluyveromyces lactis}
16908 Probab=72.66 E-value=0.27 Score=53.10 Aligned_cols=153 Identities=15% Similarity=0.129 Sum_probs=92.5 Template_Neff=12.900
16909
16910 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPL 627 (747)
16911 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e 627 (747)
16912 .++.+...+. +.++.++..++.+|..++..... ..... -..+++.+...+.+.++.++..++.++..++....
16913 T Consensus 361 ~~~~l~~~l~-~~~~~~r~~a~~~l~~l~~~~~~-----~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~ 433 (1116)
16914 T 5VE8_B 361 IIEHLPTMLS-SSNPFERRSILLAISVLVTGSPD-----YTLSQ-FDKIIPATVTGLKDSEAVVQLAALKCIVQLSTNLQ 433 (1116)
16915 T ss_dssp HHHTHHHHHH-CSCHHHHHHHHHHHHHHHHHCHH-----HHHHT-HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHT
16916 T ss_pred HHHHHHHHhh-CCCHHHHHHHHHHHHHHHhCCHH-----HHHHh-HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhcH
16917 Confidence 4555555665 35677788888888888764321 11111 13566777777777788899999999999886521
16918
16919
16920 Q NP_000290.2 628 -LHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQ-LAKQYFSSSMLNNIINLCRS-SASPKAAEAA 704 (747)
16921 Q Consensus 628 -~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e-~~~~Lve~giL~~Ll~LL~s-~~d~eVr~aA 704 (747)
16922 ........+++.+...+... .+..++..++.+|..++...+. ...... ..+++.+...+.+ . ++.++..+
16923 T Consensus 434 ~~~~~~~~~~~~~l~~~l~~~-----~~~~v~~~a~~~l~~l~~~~~~~~~~~~~-~~~~~~l~~~l~~~~-~~~~~~~~ 506 (1116)
16924 T 5VE8_B 434 DEVARYHEQYLPLVIDIIDSA-----KHVVIYKYATLALDGLLEFIAHNDIIKYL-DPLMNKLFQMLETQQ-SPKLRAAI 506 (1116)
16925 T ss_dssp HHHHTTHHHHHHHHHHHHHTC-----CSHHHHHHHHHHHHHHHHTSCHHHHHHHH-HHHHHHHHHHHHHCC-CHHHHHHH
16926 T ss_pred HHHHHHHHHHHHHHHHHhccC-----CCHHHHHHHHHHHHHHHhhcCHhhHHHHH-HHHHHHHHHHHhcCC-CHHHHHHH
16927 Confidence 11111123555666665541 2567788888888888764222 111111 2356666666665 3 56777778
16928
16929
16930 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
16931 Q Consensus 705 L~aLsnL~~~ 714 (747)
16932 +.++..++..
16933 T Consensus 507 ~~~l~~l~~~ 516 (1116)
16934 T 5VE8_B 507 VSAIGSCAFA 516 (1116)
16935 T ss_dssp HHHHHHHHHH
16936 T ss_pred HHHHHHHHHH
16937 Confidence 8888777653
16938
16939
16940 No 474
16941 >4ZV6_A AlphaRep-7, Octarellin V.1; synthetic gene, artificial protein, Rossmann-like; 2.22A {synthetic construct}
16942 Probab=71.73 E-value=0.3 Score=43.65 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=18.6 Template_Neff=12.500
16943
16944 Q NP_000290.2 685 LNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
16945 Q Consensus 685 L~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
16946 ++.+...+.+. ++.++..++.++..+...
16947 T Consensus 140 ~~~l~~~l~~~-~~~~r~~a~~~l~~~~~~ 168 (294)
16948 T 4ZV6_A 140 VEPLIKALKDE-DPYVRMAAAYALGKIGDE 168 (294)
16949 T ss_pred HHHHHHHhCCC-CHHHHHHHHHHHhhhCCH
16950 Confidence 34455555554 667788888888776543
16951
16952
16953 No 475
16954 >6BZX_A alpha-Rep, Octarellin V.1; protein design, artificial protein, DE; 3.107A {synthetic construct}
16955 Probab=71.39 E-value=0.31 Score=43.56 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=18.5 Template_Neff=12.500
16956
16957 Q NP_000290.2 685 LNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
16958 Q Consensus 685 L~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
16959 ++.+...+.+. ++.++..++.++..+...
16960 T Consensus 140 ~~~l~~~l~~~-~~~~r~~a~~~l~~~~~~ 168 (294)
16961 T 6BZX_A 140 VEPLIKALKDE-DPYVRMAAAYALGKIGDE 168 (294)
16962 T ss_dssp HHHHHHHTTCS-SHHHHHHHHHHHHHHTCG
16963 T ss_pred HHHHHHHhcCC-CHHHHHHHHHHHHHHcch
16964 Confidence 34455555554 667788888887776543
16965
16966
16967 No 476
16968 >5IFE_C Splicing factor 3B subunit 5; pre-mRNA splicing, U2 snRNP, essential; 3.1A {Homo sapiens}
16969 Probab=70.42 E-value=0.38 Score=55.84 Aligned_cols=154 Identities=9% Similarity=0.047 Sum_probs=91.7 Template_Neff=9.800
16970
16971 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
16972 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
16973 +++.|...+.+..++.++..++.+|..++..... .... .-..+++.|...+.+.+..++..++.+|..++...
16974 T Consensus 644 ll~~L~~~l~s~~~~~~r~~al~~L~~l~~~~~~-----~~~~-~l~~ll~~L~~~L~d~~~~VR~~a~~~L~~l~~~~~ 717 (1304)
16975 T 5IFE_C 644 LLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGC-----AILP-HLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAAT 717 (1304)
16976 T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhh-----hchh-hHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCC
16977 Confidence 4455555555222367788888888888753221 0111 11345666777777777889999999999988652
16978
16979
16980 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
16981 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
16982 .. ...+ ..+++.|+..+.+ ....++..++.+|..++..............++..|...+.+. +..++..++
16983 T Consensus 718 ~~~~~~~-~~ll~~Ll~~l~~------~~~~v~~~~l~aL~~l~~~~~~~~~~~~~~~ll~~L~~~l~~~-~~~vr~~al 789 (1304)
16984 T 5IFE_C 718 PYGIESF-DSVLKPLWKGIRQ------HRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP-DEEMKKIVL 789 (1304)
16985 T ss_pred HHHHHHH-HHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHhcCHHHhhhHHHHHHHHHHHHhCCC-CHHHHHHHH
16986 Confidence 11 1111 2345666666654 2456677788888877653221111111124566666777655 677888888
16987
16988
16989 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
16990 Q Consensus 706 ~aLsnL~~~~ 715 (747)
16991 .+|..++...
16992 T Consensus 790 ~~L~~l~~~~ 799 (1304)
16993 T 5IFE_C 790 KVVKQCCGTD 799 (1304)
16994 T ss_pred HHHHHHHhcc
16995 Confidence 8888877543
16996
16997
16998 No 477
16999 >6AHD_1 Pre-mRNA-processing-splicing factor 8, Thioredoxin-like protein; Spliceosome, SPLICING; HET: IHP, GTP; 3.8A {Homo sapiens}
17000 Probab=70.42 E-value=0.38 Score=55.84 Aligned_cols=154 Identities=9% Similarity=0.047 Sum_probs=91.7 Template_Neff=9.800
17001
17002 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHP- 626 (747)
17003 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~- 626 (747)
17004 +++.|...+.+..++.++..++.+|..++..... .... .-..+++.|...+.+.+..++..++.+|..++...
17005 T Consensus 644 ll~~L~~~l~s~~~~~~r~~al~~L~~l~~~~~~-----~~~~-~l~~ll~~L~~~L~d~~~~VR~~a~~~L~~l~~~~~ 717 (1304)
17006 T 6AHD_1 644 LLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGC-----AILP-HLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAAT 717 (1304)
17007 T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhh-----hchh-hHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCC
17008 Confidence 4455555555222367788888888888753221 0111 11345666777777777889999999999988652
17009
17010
17011 Q NP_000290.2 627 LL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAAR 705 (747)
17012 Q Consensus 627 e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL 705 (747)
17013 .. ...+ ..+++.|+..+.+ ....++..++.+|..++..............++..|...+.+. +..++..++
17014 T Consensus 718 ~~~~~~~-~~ll~~Ll~~l~~------~~~~v~~~~l~aL~~l~~~~~~~~~~~~~~~ll~~L~~~l~~~-~~~vr~~al 789 (1304)
17015 T 6AHD_1 718 PYGIESF-DSVLKPLWKGIRQ------HRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP-DEEMKKIVL 789 (1304)
17016 T ss_pred HHHHHHH-HHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHHhcCHHHhhhHHHHHHHHHHHHhCCC-CHHHHHHHH
17017 Confidence 11 1111 2345666666654 2456677788888877653221111111124566666777655 677888888
17018
17019
17020 Q NP_000290.2 706 LLLSDMWSSK 715 (747)
17021 Q Consensus 706 ~aLsnL~~~~ 715 (747)
17022 .+|..++...
17023 T Consensus 790 ~~L~~l~~~~ 799 (1304)
17024 T 6AHD_1 790 KVVKQCCGTD 799 (1304)
17025 T ss_pred HHHHHHHhcc
17026 Confidence 8888877543
17027
17028
17029 No 478
17030 >2QK2_A LP04448p; Mini spindles, Msps, XMAP215, Dis1; 2.1A {Drosophila melanogaster}
17031 Probab=70.35 E-value=0.34 Score=41.59 Aligned_cols=113 Identities=7% Similarity=-0.008 Sum_probs=66.2 Template_Neff=12.700
17032
17033 Q NP_000290.2 243 SGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLL-RSPNQNVQQAAAGALRNLVFRSTTN 321 (747)
17034 Q Consensus 243 ~~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL-~s~d~eVr~~AL~aLs~La~~~~~~ 321 (747)
17035 ...+++.+...+.+.++.++..++..+..+....+....... ..+++.+...+ .+.++.++..++.++..+.......
17036 T Consensus 13 ~~~l~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~~~~~~~ 91 (242)
17037 T 2QK2_A 13 LSKMPKDFYDKLEEKKWTLRKESLEVLEKLLTDHPKLENGEY-GALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKR 91 (242)
17038 T ss_dssp GGGSCTTHHHHHTCSSHHHHHHHHHHHHHHHHHCSSBCCCCC-HHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGG
17039 T ss_pred hhhCCHHHHHHHhccchHHHHHHHHHHHHHHhhCcccccchH-HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHhhHh
17040 Confidence 344555666667777788888999988888764332111111 23566666667 6667788888888888877543322
17041
17042
17043 Q NP_000290.2 322 KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLS 358 (747)
17044 Q Consensus 322 ~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLa 358 (747)
17045 .... ...+++.+...+. +.+..++..+..++..+.
17046 T Consensus 92 ~~~~-~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~~~ 126 (242)
17047 T 2QK2_A 92 FSNY-ASACVPSLLEKFK-EKKPNVVTALREAIDAIY 126 (242)
17048 T ss_dssp GHHH-HHHHHHHHHHGGG-CCCHHHHHHHHHHHHHHH
17049 T ss_pred HHHH-HHhHHHHHHHHHh-cCCHHHHHHHHHHHHHHH
17050 Confidence 1111 1234555555554 334455555555555544
17051
17052
17053 No 479
17054 >6MZG_E Tubulin alpha-1A chain, Tubulin beta; Microtubule, Tubulin, Tubulin polymerization, Heat; HET: GTP, GDP; 3.208A {Sus scrofa}
17055 Probab=70.02 E-value=0.35 Score=47.53 Aligned_cols=71 Identities=15% Similarity=0.238 Sum_probs=44.3 Template_Neff=12.700
17056
17057 Q NP_000290.2 549 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQ---LIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
17058 Q Consensus 549 I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~---~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
17059 ++.++..+. +.++.++..++.+|..++..... . .. .. ....+++.+..++.+.++.++..++.+|..+...
17060 T Consensus 138 ~~~l~~~l~-~~~~~vr~~~~~~l~~l~~~~~~---~-~~~~~~~-~~~~i~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 211 (554)
17061 T 6MZG_E 138 VNLMLPSLS-NKLPRLVSSCVKCLATIIEEFGF---I-NVSDINI-LLSEILEPLPKLSSHADRNVRSETMNLILQIYKW 211 (554)
17062 T ss_dssp HHHHSGGGG-CSCHHHHHHHHHHHHHHHHHTCS---C-SCSCHHH-HHHHHHSSHHHHTTCSSHHHHHHHHHHHHHHHHH
17063 T ss_pred HHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhCC---C-ccccccc-cHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
17064 Confidence 444555555 35667777888888877653221 0 00 00 1235667777777777788888888888877654
17065
17066
17067 No 480
17068 >6QH7_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: SEP; 3.4A {Rattus norvegicus}
17069 Probab=69.91 E-value=0.36 Score=48.86 Aligned_cols=100 Identities=18% Similarity=0.054 Sum_probs=56.7 Template_Neff=12.200
17070
17071 Q NP_000290.2 247 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETR 326 (747)
17072 Q Consensus 247 L~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ll 326 (747)
17073 ++.+...+.+.++.++..++.++..+........ ..++..+...+.+.++.++..++.++..+.... .
17074 T Consensus 76 ~~~l~~~l~~~~~~~r~~a~~~l~~~~~~~~~~~-----~~~~~~l~~~l~~~~~~vr~~al~~l~~~~~~~-------~ 143 (621)
17075 T 6QH7_A 76 HMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELI-----RLINNAIKNDLASRNPTFMGLALHCIANVGSRE-------M 143 (621)
17076 T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHSCCCCHHHH-----HHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCHH-------H
17077 T ss_pred HHHHHHHHcCCCccHHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHHhcCCHHHHHHHHHHHHhhCCHH-------H
17078 Confidence 3344455555666677777777776654322111 123444555555666777777777777665321 0
17079
17080
17081 Q NP_000290.2 327 RQNGIREAVSLL--RRTGNAEIQKQLTGLLWNLSS 359 (747)
17082 Q Consensus 327 ~~~IL~~Ll~lL--~ss~d~eVr~~AL~aLsnLas 359 (747)
17083 ...++..+...+ . +.++.++..++.++..+..
17084 T Consensus 144 ~~~l~~~l~~~l~~~-~~~~~vr~~a~~~L~~~~~ 177 (621)
17085 T 6QH7_A 144 AEAFAGEIPKILVAG-DTMDSVKQSAALCLLRLYR 177 (621)
17086 T ss_dssp HHHHTTHHHHHHTTS-CCCHHHHHHHHHHHHHHHH
17087 T ss_pred HHHHHhhHHHHHHcC-CCCHHHHHHHHHHHHHHHH
17088 Confidence 113444455555 4 4566777788888777765
17089
17090
17091 No 481
17092 >1UKL_A Importin beta-1 subunit/Sterol regulatory element; Transcription factor, Nuclear transport factor; HET: MSE; 3.0A {Mus musculus} SCOP: a.118.1.1
17093 Probab=69.90 E-value=0.35 Score=50.26 Aligned_cols=154 Identities=11% Similarity=0.064 Sum_probs=87.3 Template_Neff=13.100
17094
17095 Q NP_000290.2 548 AIRTYLNLMGKSKK--DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGN--SDVVRSGASLLSNMS 623 (747)
17096 Q Consensus 548 ~I~~LL~LL~ss~d--~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d--~eVr~~AL~aLsnLa 623 (747)
17097 .++.+...+. +.+ +.++..++.+|..+...... . .... ....+++.+...+.+.+ +.++..++.++..+.
17098 T Consensus 129 l~~~l~~~l~-~~~~~~~~~~~al~~l~~l~~~~~~---~-~~~~-~~~~l~~~l~~~l~~~~~~~~vr~~a~~~l~~~~ 202 (876)
17099 T 1UKL_A 129 LIPQLVANVT-NPNSTEHMKESTLEAIGYICQDIDP---E-QLQD-KSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 202 (876)
17100 T ss_dssp SHHHHHHHHH-STTCCHHHHHHHHHHHHHHHHHSCS---T-TTSS-SCHHHHHHHHHTTSTTCSCHHHHHHHHHHHHHHG
17101 T ss_pred HHHHHHHHhh-CCCCCHHHHHHHHHHHHHHhccCCH---H-HHHH-HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
17102 Confidence 3455555565 233 56777788888777653221 0 0001 12346666777776655 778888888888876
17103
17104
17105 Q NP_000290.2 624 RH-PLL-H-RVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKA 700 (747)
17106 Q Consensus 624 ~~-~e~-~-~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eV 700 (747)
17107 .. ... . ......++..+..++.+ .++.++..++.+|..+....+..........+++.+...+.+. ++.+
17108 T Consensus 203 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~r~~a~~~l~~l~~~~~~~~~~~~~~~l~~~l~~~l~~~-~~~v 275 (876)
17109 T 1UKL_A 203 EFTKANFDKESERHFIMQVVCEATQC------PDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSD-IDEV 275 (876)
17110 T ss_dssp GGCHHHHHSHHHHHHHHHHHHHHTTS------SCHHHHHHHHHHHHHHHTTCGGGGHHHCCCCCHHHHHHHHHCS-CHHH
17111 T ss_pred HHhHHhcCCHHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHHHHHHHHHhHHhchHHHHHHHHHHhhCC-CHHH
17112 Confidence 54 111 0 01112233334444443 3577888899999888765333222122223456666666655 6778
17113
17114
17115 Q NP_000290.2 701 AEAARLLLSDMWSS 714 (747)
17116 Q Consensus 701 r~aAL~aLsnL~~~ 714 (747)
17117 +..++.++..+...
17118 T Consensus 276 ~~~a~~~l~~l~~~ 289 (876)
17119 T 1UKL_A 276 ALQGIEFWSNVCDE 289 (876)
17120 T ss_dssp HHHHHHHHHHHHHH
17121 T ss_pred HHHHHHHHHHHHHH
17122 Confidence 88888888777653
17123
17124
17125 No 482
17126 >6EMK_C Serine/threonine-protein kinase TOR2 (E.C.2.7.1.67,2.7.11.1), Target; target of rapamycin, torc2, FRB; 8.0A {Saccharomyces cerevisiae (strain ATCC 204508 / S288c)}
17127 Probab=69.88 E-value=0.38 Score=58.82 Aligned_cols=136 Identities=10% Similarity=0.088 Sum_probs=72.9 Template_Neff=11.300
17128
17129 Q NP_000290.2 562 DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HRVMGNQVFPEV 640 (747)
17130 Q Consensus 562 ~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~-~~ll~~giI~~L 640 (747)
17131 +.++..++.+|..++..... . .... -..+++.|...+.+....++..+..++..+...... ...+ ..+++.+
17132 T Consensus 1016 ~~vr~~a~~~l~~l~~~~~~---~-~~~~--~~~ll~~l~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~l-~~i~~~l 1088 (2474)
17133 T 6EMK_C 1016 IKLQITIISVIESISKALEG---E-FKRF--VPETLTFFLDILENDQSNKRIVPIRILKSLVTFGPNLEDYS-HLIMPIV 1088 (2474)
17134 T ss_dssp CCCCCCCSSCCCCCCSSCSC---C-SCCC--CCCCCTTHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC-CCCTTHH
17135 T ss_pred hHHHHHHHHHHHHHHHHhhH---h-HHHH--HHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHhhhhHHHHH-HHHHHHH
17136 Confidence 34555666666666543221 0 0111 134556666666655445555555565555533111 1111 2244555
17137
17138
17139 Q NP_000290.2 641 TRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
17140 Q Consensus 641 l~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
17141 +..+.. .++.++..++.+|..++..... .. ....++..+...+.+. ++.++..++.+|..++..
17142 T Consensus 1089 ~~~l~~------~~~~vr~~a~~~l~~l~~~~~~--~~-~~~~i~~~l~~~l~~~-~~~vr~~a~~~l~~l~~~ 1152 (2474)
17143 T 6EMK_C 1089 VRMTEY------SAGSLKKISIITLGRLAKNINL--SE-MSSRIVQALVRILNNG-DRELTKATMNTLSLLLLQ 1152 (2474)
17144 T ss_dssp HHCCCC------CCCCCTTTTTCCCCCCCCCCCC--CC-CCCCCCCCCCSCCCCC-CCCSSHHHHTTTCCGGGC
17145 T ss_pred HHHhcC------CCccHHHHHHHHHHHHHHhCCh--HH-HHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHH
17146 Confidence 555554 2567888888888888754221 11 1123566666666654 667788888888777653
17147
17148
17149 No 483
17150 >4XL5_C Green fluorescent protein, bGFP-A; AlphaRep Scaffold, Complex, EGFP, PROTEIN; HET: CRO; 2.0A {Aequorea victoria}
17151 Probab=69.87 E-value=0.36 Score=42.43 Aligned_cols=49 Identities=10% Similarity=0.082 Sum_probs=29.3 Template_Neff=12.400
17152
17153 Q NP_000290.2 654 SEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
17154 Q Consensus 654 d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
17155 ++.++..++.++..+.. ...++.+..++.+. ++.++..++.++..+...
17156 T Consensus 120 ~~~~~~~a~~~l~~~~~-----------~~~~~~l~~~l~~~-~~~vr~~a~~~l~~~~~~ 168 (263)
17157 T 4XL5_C 120 DPWVRLTAARALGEIGD-----------ERAVEPLIKALKDE-DPWVRLTAARALGQIGDE 168 (263)
17158 T ss_dssp SHHHHHHHHHHHHHHCC-----------GGGHHHHHHHTTCS-SHHHHHHHHHHHHHHCCG
17159 T ss_pred CHHHHHHHHHHHHHHCC-----------hhhHHHHHHHhhCC-CHHHHHHHHHHHHhhCCH
17160 Confidence 34455555555554432 12345555666655 678888888888877653
17161
17162
17163 No 484
17164 >4D4Z_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE, EIF-5A, HYPUSINE; HET: B3P, GOL; 1.7A {HOMO SAPIENS}
17165 Probab=69.81 E-value=0.36 Score=42.88 Aligned_cols=127 Identities=10% Similarity=0.093 Sum_probs=78.7 Template_Neff=12.700
17166
17167 Q NP_000290.2 547 DAIRTYLNLMGKSKKDA--TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
17168 Q Consensus 547 G~I~~LL~LL~ss~d~e--Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
17169 ..++.|...+. +.+.. ++..++.+|..+.. ...++.+...+.+.++.++..++.+|..+..
17170 T Consensus 161 ~~~~~l~~~l~-~~~~~~~~r~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~ 223 (294)
17171 T 4D4Z_A 161 RDVGRLREALL-DESRPLFERYRAMFALRNAGG----------------EEAALALAEGLHCGSALFRHEVGYVLGQLQH 223 (294)
17172 T ss_dssp CCHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCH----------------HHHHHHHHHGGGSSCHHHHHHHHHHHHHHCC
17173 T ss_pred HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHcCC----------------HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC
17174 Confidence 34566667776 34433 66677777665532 1234455666667777888888888877653
17175
17176
17177 Q NP_000290.2 625 HPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
17178 Q Consensus 625 ~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
17179 . ..++.+...+.+. ..++.++..++.+|+.+... ..++.|..++.+. ++.++..+
17180 T Consensus 224 ~---------~~~~~l~~~l~~~----~~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a 278 (294)
17181 T 4D4Z_A 224 E---------AAVPQLAAALARC----TENPMVRHECAEALGAIARP-----------ACLAALQAHADDP-ERVVRESC 278 (294)
17182 T ss_dssp G---------GGHHHHHHHHHCT----TSCHHHHHHHHHHHHHHCCH-----------HHHHHHHHHTTCS-SHHHHHHH
17183 T ss_pred h---------hHHHHHHHHHHhC----CCCHHHHHHHHHHHHHhccH-----------HHHHHHHHHhcCC-ChHHHHHH
17184 Confidence 2 2344455555520 02567888888888876531 2455666667655 67788888
17185
17186
17187 Q NP_000290.2 705 RLLLSDMWSSK 715 (747)
17188 Q Consensus 705 L~aLsnL~~~~ 715 (747)
17189 +.+|..+....
17190 T Consensus 279 ~~~l~~~~~~~ 289 (294)
17191 T 4D4Z_A 279 EVALDMYEHET 289 (294)
17192 T ss_dssp HHHHHHHHHC-
17193 T ss_pred HHHHHHHHhhc
17194 Confidence 88888776443
17195
17196
17197 No 485
17198 >4D50_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE; HET: GAI; 1.7A {HOMO SAPIENS}
17199 Probab=69.81 E-value=0.36 Score=42.88 Aligned_cols=127 Identities=10% Similarity=0.093 Sum_probs=79.0 Template_Neff=12.700
17200
17201 Q NP_000290.2 547 DAIRTYLNLMGKSKKDA--TLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR 624 (747)
17202 Q Consensus 547 G~I~~LL~LL~ss~d~e--Vr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~ 624 (747)
17203 ..++.|...+. +.+.. ++..++.+|..+.. ...++.+...+.+.++.++..++.+|..+..
17204 T Consensus 161 ~~~~~l~~~l~-~~~~~~~~r~~a~~~l~~~~~----------------~~~~~~l~~~l~~~~~~~r~~a~~~l~~~~~ 223 (294)
17205 T 4D50_A 161 RDVGRLREALL-DESRPLFERYRAMFALRNAGG----------------EEAALALAEGLHCGSALFRHEVGYVLGQLQH 223 (294)
17206 T ss_dssp CCHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCS----------------HHHHHHHHHGGGSSCHHHHHHHHHHHHHHCC
17207 T ss_pred HHHHHHHHHHH-hCCCCHHHHHHHHHHHHHcCC----------------HHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC
17208 Confidence 34566667776 34433 66677777665532 1234455666667777888888888877653
17209
17210
17211 Q NP_000290.2 625 HPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
17212 Q Consensus 625 ~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
17213 . ..++.+...+.+. ..++.++..++.+|+.+... ..++.|..++.+. ++.++..+
17214 T Consensus 224 ~---------~~~~~l~~~l~~~----~~~~~vr~~a~~~l~~~~~~-----------~~~~~l~~~l~~~-~~~vr~~a 278 (294)
17215 T 4D50_A 224 E---------AAVPQLAAALARC----TENPMVRHECAEALGAIARP-----------ACLAALQAHADDP-ERVVRESC 278 (294)
17216 T ss_dssp G---------GGHHHHHHHHHCT----TSCHHHHHHHHHHHHHHCCH-----------HHHHHHHHTTTCS-CHHHHHHH
17217 T ss_pred h---------hHHHHHHHHHHhC----CCCHHHHHHHHHHHHHhccH-----------HHHHHHHHHhcCC-ChHHHHHH
17218 Confidence 2 2344455555520 02567888888888876531 2455666667655 67788888
17219
17220
17221 Q NP_000290.2 705 RLLLSDMWSSK 715 (747)
17222 Q Consensus 705 L~aLsnL~~~~ 715 (747)
17223 +.+|..+....
17224 T Consensus 279 ~~~l~~~~~~~ 289 (294)
17225 T 4D50_A 279 EVALDMYEHET 289 (294)
17226 T ss_dssp HHHHHHHHHHH
17227 T ss_pred HHHHHHHHhhc
17228 Confidence 88888776443
17229
17230
17231 No 486
17232 >6QH5_A AP-2 complex subunit alpha, AP-2; ENDOCYTOSIS, PHOSPHORYLATION, CELL MEMBRANE, PROTEIN; HET: IHP; 2.56A {Rattus norvegicus}
17233 Probab=69.69 E-value=0.37 Score=48.79 Aligned_cols=67 Identities=12% Similarity=0.101 Sum_probs=37.3 Template_Neff=12.200
17234
17235 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ-SGNSDVVRSGASLLSNMS 623 (747)
17236 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~-s~d~eVr~~AL~aLsnLa 623 (747)
17237 .++.+..++. +.++.++..++.+|..+...... ... -...++.+...+. +.++.++..++.+|..+.
17238 T Consensus 330 ~~~~l~~~l~-~~~~~vr~~a~~~L~~l~~~~~~------~~~--~~~~~~~l~~~l~~~~~~~vr~~a~~~l~~l~ 397 (621)
17239 T 6QH5_A 330 ACNQLGQFLQ-HRETNLRYLALESMCTLASSEFS------HEA--VKTHIETVINALKTERDVSVRQRAVDLLYAMC 397 (621)
17240 T ss_pred HHHHHHHHHh-CCCHHHHHHHHHHHHHHHhcCCC------hhH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc
17241 Confidence 4555666665 35666777777777777653110 111 1224445555555 555666666666666653
17242
17243
17244 No 487
17245 >4XL5_C Green fluorescent protein, bGFP-A; AlphaRep Scaffold, Complex, EGFP, PROTEIN; HET: CRO; 2.0A {Aequorea victoria}
17246 Probab=69.51 E-value=0.37 Score=42.33 Aligned_cols=88 Identities=10% Similarity=0.162 Sum_probs=47.9 Template_Neff=12.400
17247
17248 Q NP_000290.2 600 IARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQY 679 (747)
17249 Q Consensus 600 Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~L 679 (747)
17250 +..++.+.++.++..++.++..+.. ...++.+...+.+ .++.++..++.+|..+..
17251 T Consensus 143 l~~~l~~~~~~vr~~a~~~l~~~~~---------~~~~~~l~~~l~~------~~~~~r~~a~~~l~~~~~--------- 198 (263)
17252 T 4XL5_C 143 LIKALKDEDPWVRLTAARALGQIGD---------ERAVEPLIKALKD------EDASVRKAAAVALGQIGD--------- 198 (263)
17253 T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHCC---------GGGHHHHHHHTTC------SSHHHHHHHHHHHHHHCC---------
17254 T ss_pred HHHHhhCCCHHHHHHHHHHHHhhCC---------HHHHHHHHHHhcC------CCHHHHHHHHHHHHHhCC---------
17255 Confidence 3344444444555555555444432 1223344444444 245566667666666542
17256
17257
17258 Q NP_000290.2 680 FSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 714 (747)
17259 Q Consensus 680 ve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~ 714 (747)
17260 ...++.+..++.+. +..++..++.++..+...
17261 T Consensus 199 --~~~~~~l~~~l~~~-~~~~~~~a~~~l~~~~~~ 230 (263)
17262 T 4XL5_C 199 --ERAVEPLIKALKDE-DEYVRQRAASALGKIGGE 230 (263)
17263 T ss_dssp --GGGHHHHHHHTTCS-SHHHHHHHHHHHHHHCHH
17264 T ss_pred --hhhHHHHHHHhcCC-CHHHHHHHHHHHHhhCcH
17265 Confidence 12345566666655 677888888888887753
17266
17267
17268 No 488
17269 >6LTJ_L Histone H3.2, Histone H4, Histone; Chromatin remodeler, Complex, GENE REGULATION; 3.7A {Xenopus laevis}
17270 Probab=69.20 E-value=0.52 Score=55.12 Aligned_cols=106 Identities=11% Similarity=0.124 Sum_probs=60.8 Template_Neff=5.100
17271
17272 Q NP_000290.2 609 SDVVRSGASLLSNMSRHPLL---HRVMGNQVFPEVTRLLTSHTGNTSNSE----------DILSSACYTVRNLMASQPQL 675 (747)
17273 Q Consensus 609 ~eVr~~AL~aLsnLa~~~e~---~~ll~~giI~~Ll~LL~s~s~~~~~d~----------eVr~~Al~aLsnLa~~s~e~ 675 (747)
17274 ..+++.++.+|.||+...+. ...+...++..|+.++...... ..++ ..+..|+.+|+.|+.. +.+
17275 T Consensus 1064 ~~LRenaLviLaNIAg~LdLs~~~e~I~~~ild~LLhwlv~~sa~-a~Dp~~~~~~~~~lSp~~lALEaLsKLsv~-d~N 1141 (1295)
17276 T 6LTJ_L 1064 EMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAE-AQDPFSTLGPNAVLSPQRLVLETLSKLSIQ-DNN 1141 (1295)
17277 T ss_dssp HHHHHHHHHHHHHHGGGCCCSSSCHHHHHHHHHHHHHHHHCCSSS-SSSCCTTSCTTCCCCHHHHHHHHHHHHHTS-HHH
17278 T ss_pred HHHHHHHHHHHHHHHcccCCCCCChHhHHHHHHHHHHHHcCcChh-cCChhhccCCCCCCCHHHHHHHHHHHHhCC-Cch
17279 Confidence 35667788889998876221 1111112455555544321000 0011 1234589999999874 555
17280
17281
17282 Q NP_000290.2 676 AKQYFSSS-------MLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 716 (747)
17283 Q Consensus 676 ~~~Lve~g-------iL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~~ 716 (747)
17284 ...++... ++..|+.+|....+..+++.++.+|.+|+...+
17285 T Consensus 1142 ~dlLlat~p~srle~Ll~~LV~lL~~~ed~~lrE~AL~lL~~Ls~~~~ 1189 (1295)
17286 T 6LTJ_L 1142 VDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDS 1189 (1295)
17287 T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHCH
17288 T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCH
17289 Confidence 55555433 566667777644245678899999999987543
17290
17291
17292 No 489
17293 >5WLC_LM rpS18_uS13, rpS4_eS4, rpS5_uS7, rpS6_eS6, rpS7_eS7; Ribosome assembly, RIBOSOME; 3.8A {Saccharomyces cerevisiae BY4741}
17294 Probab=69.09 E-value=0.44 Score=57.42 Aligned_cols=153 Identities=6% Similarity=-0.058 Sum_probs=85.4 Template_Neff=9.300
17295
17296 Q NP_000290.2 548 AIRTYLNLMGKS-----KKDATLEACAGALQNLTASKGLMSSGMSQL-IGLKEKGLPQIARLLQSGNSDVVRSGASLLSN 621 (747)
17297 Q Consensus 548 ~I~~LL~LL~ss-----~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~-llie~giI~~Ll~LL~s~d~eVr~~AL~aLsn 621 (747)
17298 +++.++..+... .+..++..++.+|..++..... ..... .. -..+++.|...+......++..++.++..
17299 T Consensus 1597 ll~~l~~~L~~~~~~~~~~~~v~~~al~~L~~l~~~~~~---~~~~~~~~-~~~il~~L~~~L~~~~~~v~~~al~~L~~ 1672 (1769)
17300 T 5WLC_LM 1597 LLEPVDMLLKRFISKDMENVNLRRLVINSLTSSLKFDRD---EYWKSTSR-FELISVSLVNQLSNIENSIGKYLVKAIGA 1672 (1769)
17301 T ss_pred HHHHHHHHHHHhcCCchhcHHHHHHHHHHHHHHHhhCCc---ccccCHhH-HHHHHHHHHHHHHccchHHHHHHHHHHHH
17302 Confidence 455555555421 1356677888888887764221 00000 11 13456666666666556677778888888
17303
17304
17305 Q NP_000290.2 622 MSRH-PLLHRVMGNQVFPEVTRLLTSHTGNTSN-SEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPK 699 (747)
17306 Q Consensus 622 La~~-~e~~~ll~~giI~~Ll~LL~s~s~~~~~-d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~e 699 (747)
17307 ++.. ....... ..+.+.++..+.+ . +..++..++.++..+..........+. ..+++.+.+.+.+. ++.
17308 T Consensus 1673 L~~~~~~~~~~~-~~l~~~ll~~l~~------~~~~~vR~~al~~L~~l~~~~g~~~~~~l-~~il~~L~e~Led~-~~~ 1743 (1769)
17309 T 5WLC_LM 1673 LASNNSGVDEHN-QILNKLIVEHMKA------SCSSNEKLWAIRAMKLIYSKIGESWLVLL-PQLVPVIAELLEDD-DEE 1743 (1769)
17310 T ss_pred HHHhccCChHHH-HHHHHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHChhHHHhH-hHHHHHHHHHccCC-CHH
17311 Confidence 7653 1111111 1133344444433 2 567788888898888765332211111 24567777777765 677
17312
17313
17314 Q NP_000290.2 700 AAEAA-RLLLSDMWS 713 (747)
17315 Q Consensus 700 Vr~aA-L~aLsnL~~ 713 (747)
17316 ++..+ ..++..+..
17317 T Consensus 1744 Vr~~a~~~~l~~L~~ 1758 (1769)
17318 T 5WLC_LM 1744 IEREVRTGLVKVVEN 1758 (1769)
17319 T ss_pred HHHHHHHHHHHHHHH
17320 Confidence 88888 777776654
17321
17322
17323 No 490
17324 >5YVI_A Transportin-1, RNA-binding protein FUS; Importin family, PROTEIN TRANSPORT, PROTEIN; 2.9A {Homo sapiens}
17325 Probab=69.07 E-value=0.37 Score=49.71 Aligned_cols=155 Identities=9% Similarity=0.106 Sum_probs=91.1 Template_Neff=13.300
17326
17327 Q NP_000290.2 548 AIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIG--LKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH 625 (747)
17328 Q Consensus 548 ~I~~LL~LL~ss~d~eVr~~AL~aL~nLs~~s~~~s~~~~~~ll--ie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~ 625 (747)
17329 .++.+...+. +.++.++..++.+|..++..... ......+ .-..+++.+...+.+.++.++..++.+|..++..
17330 T Consensus 131 ~~~~l~~~l~-~~~~~~~~~~l~~l~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~ 206 (868)
17331 T 5YVI_A 131 LLPKLCSLLD-SEDYNTCEGAFGALQKICEDSAE---ILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIIS 206 (868)
17332 T ss_dssp HHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHHTT---CSCC--CCSTHHHHHHHHGGGGGCSSHHHHHHHHHHHHTTTTT
17333 T ss_pred HHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHhh---hcchhhccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
17334 Confidence 4555666665 35667777888888887754211 0000000 0134566677777777788888999999888765
17335
17336
17337 Q NP_000290.2 626 PLL-HRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAA 704 (747)
17338 Q Consensus 626 ~e~-~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aA 704 (747)
17339 ... .......+++.+...+.+ .+..++..++.+|..++........... ..+++.+...+.+. ++.++..+
17340 T Consensus 207 ~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~~~~~l~~l~~~~~~~~~~~~-~~~~~~l~~~l~~~-~~~v~~~~ 278 (868)
17341 T 5YVI_A 207 RTQALMLHIDSFIENLFALAGD------EEPEVRKNVCRALVMLLEVRMDRLLPHM-HNIVEYMLQRTQDQ-DENVALEA 278 (868)
17342 T ss_dssp TCHHHHTTHHHHHHHHHHTTTC------SSHHHHHHHHHHHHHHHHHCHHHHGGGH-HHHHHHHHHHHTCS-SHHHHHHH
17343 T ss_pred chHHHHHhHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHcHHHHHHhH-HHHHHHHHHHccCC-CHHHHHHH
17344 Confidence 211 111112345555555544 2567788888888888764322111111 23456666666655 67788888
17345
17346
17347 Q NP_000290.2 705 RLLLSDMWSS 714 (747)
17348 Q Consensus 705 L~aLsnL~~~ 714 (747)
17349 +.++..++..
17350 T Consensus 279 ~~~l~~l~~~ 288 (868)
17351 T 5YVI_A 279 CEFWLTLAEQ 288 (868)
17352 T ss_dssp HHHHHHHHHS
17353 T ss_pred HHHHHHHhcC
17354 Confidence 8888887764
17355
17356
17357 No 491
17358 >3VWA_A Cytoplasmic export protein 1; tRNA, nuclear export, HEAT repeat; 2.2A {Saccharomyces cerevisiae}
17359 Probab=68.93 E-value=0.42 Score=49.31 Aligned_cols=111 Identities=9% Similarity=0.051 Sum_probs=80.6 Template_Neff=10.600
17360
17361 Q NP_000290.2 594 EKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP 673 (747)
17362 Q Consensus 594 ~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~ 673 (747)
17363 ..+++.+..++.+.++.++..++..|..++.... .......+++.+...+.+ .+..++..++.+|..++...+
17364 T Consensus 340 ~~~~~~l~~ll~~~~~~vR~~~~~~l~~~~~~~~-~~~~~~~~~~~l~~~l~d------~~~~vr~~a~~~l~~l~~~~~ 412 (560)
17365 T 3VWA_A 340 VGFNDLITQSFKLPDRQVRFLLLIYLPKLIGPLS-KSEISSRIYPHFIQGLTD------SDATLRLQTLKTIPCIVSCLT 412 (560)
17366 T ss_dssp TTHHHHHHHHHHCCCHHHHHHHHHHHHHHBTTBC-HHHCCCCCHHHHHHGGGC------SSHHHHHHHHHHHHHHGGGCC
17367 T ss_pred cchHHHHHHHcCCCCHHHHHHHHHhHHHHhccCC-HHHHHhchHHHHHHHhcC------CCHHHHHHHHHHHHHHHhhCC
17368 Confidence 4577888888888888999999999888876411 112234567777777766 367889999999999886432
17369
17370
17371 Q NP_000290.2 674 QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
17372 Q Consensus 674 e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
17373 .. .....+++.+..++.+. ++.++..++.+|..++...
17374 T Consensus 413 ~~---~~~~~ll~~l~~~l~d~-~~~vR~~a~~~l~~i~~~~ 450 (560)
17375 T 3VWA_A 413 ER---QLNNELLRFLAKTQVDS-DVEIRTWTVIIISKISTIL 450 (560)
17376 T ss_dssp HH---CCCCCCHHHHHHHTTCS-SHHHHHHHHHHHHHHGGGS
17377 T ss_pred HH---HHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHh
17378 Confidence 11 22345677888888766 7899999999999887544
17379
17380
17381 No 492
17382 >3VWA_B Cytoplasmic export protein 1; tRNA, nuclear export, HEAT repeat; HET: MSE; 2.2A {Saccharomyces cerevisiae}
17383 Probab=68.86 E-value=0.42 Score=49.21 Aligned_cols=111 Identities=9% Similarity=0.062 Sum_probs=80.6 Template_Neff=10.700
17384
17385 Q NP_000290.2 594 EKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQP 673 (747)
17386 Q Consensus 594 ~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa~~~e~~~ll~~giI~~Ll~LL~s~s~~~~~d~eVr~~Al~aLsnLa~~s~ 673 (747)
17387 ..+++.+..++.+.++.++..++..|..++.... .......+++.++..+.+ .++.++..++.+|..++...+
17388 T Consensus 340 ~~~~~~l~~l~~~~~~~vr~~~~~~l~~~~~~~~-~~~~~~~~l~~l~~~l~d------~~~~vr~~a~~~l~~l~~~~~ 412 (560)
17389 T 3VWA_B 340 VGFNDLITQSFKLPDRQVRFLLLIYLPKLIGPLS-KSEISSRIYPHFIQGLTD------SDATLRLQTLKTIPCIVSCLT 412 (560)
17390 T ss_dssp TTHHHHHHHHHHCCCHHHHHHHHHHHHHHBTTBC-HHHCCCCCHHHHHHGGGC------SCHHHHHHHHHHHHHHGGGSC
17391 T ss_pred cchHHHHHHHcCCCcHHHHHHHHHhHHHHhhhCC-HHHHhhchHHHHHHHhcC------CCHHHHHHHHHHHHHHHhhCC
17392 Confidence 4577888888888888899999998888876421 112234567777777776 368899999999999886422
17393
17394
17395 Q NP_000290.2 674 QLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK 715 (747)
17396 Q Consensus 674 e~~~~Lve~giL~~Ll~LL~s~~d~eVr~aAL~aLsnL~~~~ 715 (747)
17397 . ......+++.|..++.+. ++.++..++.+|..++...
17398 T Consensus 413 ~---~~~~~~ll~~l~~~l~d~-~~~vR~~a~~~l~~i~~~~ 450 (560)
17399 T 3VWA_B 413 E---RQLNNELLRFLAKTQVDS-DVEIRTWTVIIISKISTIL 450 (560)
17400 T ss_dssp H---HCCCCCHHHHHHHHTTCS-SHHHHHHHHHHHHHHHTTS
17401 T ss_pred H---HHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHh
17402 Confidence 1 122335678888888776 7899999999999887643
17403
17404
17405 No 493
17406 >3C5W_A PP2A A subunit, PP2A C; methylesterase, phosphatase, PP2A, HYDROLASE; 2.8A {Homo sapiens}
17407 Probab=68.82 E-value=0.38 Score=40.27 Aligned_cols=109 Identities=12% Similarity=0.007 Sum_probs=69.9 Template_Neff=13.200
17408
17409 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
17410 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
17411 ..++.+...+.+.++.++..++..+..+....... .....+++.+...+.+.++.++..++.++..+.......
17412 T Consensus 7 ~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~vr~~~~~~l~~l~~~~~~~--- 80 (232)
17413 T 3C5W_A 7 YPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVE---RLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVE--- 80 (232)
17414 T ss_dssp SHHHHHHHHHTCSSHHHHHHHHTTHHHHHHHHCSS---HCCCCCHHHHHHHTTCSSHHHHHHHHTTHHHHHHHHCGG---
17415 T ss_pred cHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhChH---HHHHhHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhCHH---
17416 Confidence 44556666777777888888888888876543211 112345666666677777788888888888776543211
17417
17418
17419 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
17420 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
17421 .....+++.+...+. +.++.++..++.++..+...
17422 T Consensus 81 ~~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 115 (232)
17423 T 3C5W_A 81 FFDEKLNSLCMAWLV-DHVYAIREAATSNLKKLVEK 115 (232)
17424 T ss_dssp GTTTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHH
17425 T ss_pred HHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHH
17426 Confidence 112235555666665 45677888888888877754
17427
17428
17429 No 494
17430 >4K92_B CLIP-associating protein 1; HEAT-Repeat TOG domain, Regulator of; HET: MSE; 2.005A {Homo sapiens}
17431 Probab=68.63 E-value=0.41 Score=43.13 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=66.8 Template_Neff=11.700
17432
17433 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
17434 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
17435 ..+++.++..+.+.+..++..++.++..+..... ...+++.+...+.+.++.++..++.++..++........
17436 T Consensus 129 ~~~l~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~-------~~~~~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~~~~~~ 201 (273)
17437 T 4K92_B 129 EAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTH-------IPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 201 (273)
17438 T ss_dssp HHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHCC-------CTTHHHHHHGGGGCSCHHHHHHHHHHHHHHHHHSCHHHH
17439 T ss_pred HHHHHHHHHHCccccHHHHHHHHHHHHHHHHhCC-------CchHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhH
17440 Confidence 3445555555555566677777777777765321 123455555666666677888888888877754322100
17441
17442
17443 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
17444 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
17445 ......+++.+...+. +.+..++..++.++..+...
17446 T Consensus 202 ~~~~~~i~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~ 237 (273)
17447 T 4K92_B 202 ERHISVLAETIKKGIH-DADSEARIEARKCYWGFHSH 237 (273)
17448 T ss_dssp TTCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHH
17449 T ss_pred HHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHH
17450 Confidence 1112345566666665 55778888888888888764
17451
17452
17453 No 495
17454 >6MQ7_B CLIP-associating protein 1; microtubule binding protein, STRUCTURAL PROTEIN; 1.78A {Homo sapiens}
17455 Probab=68.63 E-value=0.41 Score=43.13 Aligned_cols=109 Identities=12% Similarity=0.075 Sum_probs=66.8 Template_Neff=11.700
17456
17457 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
17458 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
17459 ..+++.++..+.+.+..++..++.++..+..... ...+++.+...+.+.++.++..++.++..++........
17460 T Consensus 129 ~~~l~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~-------~~~~~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~~~~~~ 201 (273)
17461 T 6MQ7_B 129 EAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTH-------IPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL 201 (273)
17462 T ss_dssp HHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHCC-------CGGGHHHHHHGGGCSCHHHHHHHHHHHHHHHHHSCGGGT
17463 T ss_pred HHHHHHHHHHCccccHHHHHHHHHHHHHHHHhCC-------CchHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhH
17464 Confidence 3445555555555566677777777777765321 123455555666666677888888888877754322100
17465
17466
17467 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
17468 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
17469 ......+++.+...+. +.+..++..++.++..+...
17470 T Consensus 202 ~~~~~~i~~~l~~~l~-d~~~~vr~~a~~~l~~l~~~ 237 (273)
17471 T 6MQ7_B 202 ERHISVLAETIKKGIH-DADSEARIEARKCYWGFHSH 237 (273)
17472 T ss_dssp TTCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHH
17473 T ss_pred HHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHH
17474 Confidence 1112345566666665 55778888888888888764
17475
17476
17477 No 496
17478 >4LAC_A Serine/threonine-protein phosphatase 2A activator (E.C.5.2.1.8); PP2A, PTPA, protein phosphatase, signaling; HET: AGS, MES; 2.82A {Homo sapiens}
17479 Probab=68.25 E-value=0.41 Score=41.40 Aligned_cols=109 Identities=7% Similarity=-0.006 Sum_probs=68.9 Template_Neff=12.800
17480
17481 Q NP_000290.2 245 LTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 324 (747)
17482 Q Consensus 245 ~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~~ 324 (747)
17483 .+++.+...+.+.++.++..++.++..+...... ......+++.+...+.+.+..++..++.++..+.......
17484 T Consensus 111 ~~~~~l~~~l~~~~~~vr~~a~~~l~~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~--- 184 (258)
17485 T 4LAC_A 111 KLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGK---EWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQD--- 184 (258)
17486 T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCh---hHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHHcCCCC---
17487 Confidence 3455556666666778888888888887654322 1112345566666666667778888888888776543221
17488
17489
17490 Q NP_000290.2 325 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
17491 Q Consensus 325 ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
17492 .....+++.+...+. +.++.++..++.++..+...
17493 T Consensus 185 ~~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 219 (258)
17494 T 4LAC_A 185 ITTKHMLPTVLRMAG-DPVANVRFNVAKSLQKIGPI 219 (258)
17495 T ss_pred ccHhhHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHH
17496 Confidence 112345566666665 55677888888888887653
17497
17498
17499 No 497
17500 >6MQ5_A CLIP-associating protein 1; Microtubule Plus End Binding, STRUCTURAL; HET: MSE; 2.146A {Homo sapiens}
17501 Probab=68.04 E-value=0.43 Score=42.33 Aligned_cols=108 Identities=10% Similarity=0.048 Sum_probs=65.9 Template_Neff=11.900
17502
17503 Q NP_000290.2 245 LTIPKAV-QYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 323 (747)
17504 Q Consensus 245 ~iL~~Ll-~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~~~ 323 (747)
17505 .++..+. .++.+.++.++..++.++..+........... ...+++.+...+.+.+..++..+..++..+......
17506 T Consensus 49 ~~~~~l~~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~--- 124 (257)
17507 T 6MQ5_A 49 KLVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQ-IGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQAAN--- 124 (257)
17508 T ss_dssp HHHHHCCCCCTTCSSHHHHHHHHHHHHHHHHHHGGGGHHH-HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHTSC---
17509 T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHhHHHHHHH-HHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHccC---
17510 Confidence 3444444 44556677788888888888876433221111 134566666666666677788888888777643211
17511
17512
17513 Q NP_000290.2 324 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
17514 Q Consensus 324 ~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
17515 ...+++.+...+. ..++.++..++.++..+...
17516 T Consensus 125 ---~~~~~~~l~~~l~-~~~~~~r~~~l~~l~~l~~~ 157 (257)
17517 T 6MQ5_A 125 ---PQYVWDRMLGGFK-HKNFRTREGICLCLIATLNA 157 (257)
17518 T ss_dssp ---HHHHHHTTGGGGG-BSSHHHHHHHHHHHHHHHHH
17519 T ss_pred ---hHHHHHHHhhhcC-CCCHHHHHHHHHHHHHHHHH
17520 Confidence 1234555555564 45677888888888877653
17521
17522
17523 No 498
17524 >2QK1_A Protein STU2; stu2, Stu2p, XMAP215, Dis1, TOG; 1.7A {Saccharomyces cerevisiae}
17525 Probab=67.88 E-value=0.42 Score=40.93 Aligned_cols=116 Identities=3% Similarity=-0.016 Sum_probs=68.4 Template_Neff=12.900
17526
17527 Q NP_000290.2 244 GLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTN-- 321 (747)
17528 Q Consensus 244 ~~iL~~Ll~lL~ssd~eVr~sAL~aLsnLs~~~~~~~~~li~~~IL~~Ll~lL~s~d~eVr~~AL~aLs~La~~~~~~-- 321 (747)
17529 ..+++.+...+.+.+..++..++.++..+...............+++.+...+.+.++.++..++.++..++......
17530 T Consensus 103 ~~~~~~l~~~l~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~~~~~l~~~~~~~~~~~~ 182 (249)
17531 T 2QK1_A 103 SLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYS 182 (249)
17532 T ss_dssp HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSH
17533 T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhChhcccCCHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhccccch
17534 Confidence 345556666666666777888888888776543210000111245566666666667778888888888776543310
17535
17536
17537 Q NP_000290.2 322 -KLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST 360 (747)
17538 Q Consensus 322 -~~~ll~~~IL~~Ll~lL~ss~d~eVr~~AL~aLsnLas~ 360 (747)
17539 ........+++.+...+. +.++.++..++.++..+...
17540 T Consensus 183 ~~~~~~~~~~~~~l~~~l~-~~~~~vr~~a~~~l~~l~~~ 221 (249)
17541 T 2QK1_A 183 TLQRYLKDEVVPIVIQIVN-DTQPAIRTIGFESFAILIKI 221 (249)
17542 T ss_dssp HHHHHCCCCCHHHHHHHHT-CSSHHHHHHHHHHHHHHHHH
17543 T ss_pred hhhHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHH
17544 Confidence 000111235555666665 55677888888888877653
17545
17546
17547 No 499
17548 >4D4Z_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE, EIF-5A, HYPUSINE; HET: B3P, GOL; 1.7A {HOMO SAPIENS}
17549 Probab=67.63 E-value=0.43 Score=42.31 Aligned_cols=60 Identities=10% Similarity=0.123 Sum_probs=34.5 Template_Neff=12.700
17550
17551 Q NP_000290.2 547 DAIRTYLNLMGKSK--KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
17552 Q Consensus 547 G~I~~LL~LL~ss~--d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
17553 ..++.|...+. +. ++.++..++.+|..+... ..++.+...+.+.++.++..++.+|..+.
17554 T Consensus 74 ~~~~~l~~~l~-~~~~~~~vr~~a~~~l~~~~~~----------------~~~~~l~~~l~~~~~~v~~~a~~~l~~~~ 135 (294)
17555 T 4D4Z_A 74 RAIPMLVDVLQ-DTRQEPMVRHEAGEALGAIGDP----------------EVLEILKQYSSDPVIEVAETCQLAVRRLE 135 (294)
17556 T ss_dssp GGHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCCG----------------GGHHHHHHHTTCSSHHHHHHHHHHHHHHH
17557 T ss_pred chHHHHHHHhh-CCCCCHHHHHHHHHHHHHhCCH----------------HHHHHHHHHccCCCchHHHHHHHHHHHHH
17558 Confidence 34556666666 34 566777777776655421 12334455555556666666666666553
17559
17560
17561 No 500
17562 >4D50_A DEOXYHYPUSINE HYDROXYLASE (E.C.1.14.99.29); OXIDOREDUCTASE; HET: GAI; 1.7A {HOMO SAPIENS}
17563 Probab=67.63 E-value=0.43 Score=42.31 Aligned_cols=60 Identities=10% Similarity=0.123 Sum_probs=34.5 Template_Neff=12.700
17564
17565 Q NP_000290.2 547 DAIRTYLNLMGKSK--KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS 623 (747)
17566 Q Consensus 547 G~I~~LL~LL~ss~--d~eVr~~AL~aL~nLs~~s~~~s~~~~~~llie~giI~~Ll~LL~s~d~eVr~~AL~aLsnLa 623 (747)
17567 ..++.|...+. +. ++.++..++.+|..+... ..++.+...+.+.++.++..++.+|..+.
17568 T Consensus 74 ~~~~~l~~~l~-~~~~~~~vr~~a~~~l~~~~~~----------------~~~~~l~~~l~~~~~~v~~~a~~~l~~~~ 135 (294)
17569 T 4D50_A 74 RAIPMLVDVLQ-DTRQEPMVRHEAGEALGAIGDP----------------EVLEILKQYSSDPVIEVAETCQLAVRRLE 135 (294)
17570 T ss_dssp GGHHHHHHHHH-CTTSCHHHHHHHHHHHHHHCCG----------------GGHHHHHHHTTCSSHHHHHHHHHHHHHHH
17571 T ss_pred chHHHHHHHhh-CCCCCHHHHHHHHHHHHHhCCH----------------HHHHHHHHHccCCCchHHHHHHHHHHHHH
17572 Confidence 34556666666 34 566777777776655421 12334455555556666666666666553
17573
17574