diff spring_minz.xml @ 10:860bd6f8f480 draft

"planemo upload commit 4b670114bbbbbe3c5207cee572a20dc48f27494a"

--- a/spring_minz.xml	Sat Aug 01 02:13:31 2020 -0400
+++ b/spring_minz.xml	Sat Aug 01 04:16:19 2020 -0400
@@ -14,13 +14,31 @@
         <param format="txt" name="inputs" type="data_collection" collection_type="list" label="Input Profiles" help="Homology search results of input profiles `hhr`."/>
         <param format="txt" name="crossreference" type="data" label="Cross Reference" help="Cross reference of interacting proteins `first_id metadata_id second_id`."/>
         <param name="minscore" type="integer" label="min-Z score threshold" value="10" min="1" max="100" help="Matching interaction pairs with a score lower than this threshold will be excluded."/>
-        <param name="idx" type="integer" label="Identifier length" value="6" min="1" max="10" help="Specify the length of the identifier e.g. `1ACB_A` has length 6."/>
+        <param name="idx" type="integer" label="Identifier length" value="6" min="1" max="20" help="Specify the length of the identifier e.g. `1ACB_A` has length 6."/>
     </inputs>
     <outputs>
         <data format="txt" name="output" />
     </outputs>
     <tests>
         <test>
+            <param name="target" value="7BQY_A.hhr"/>
+            <param name="idx" value="10"/>
+            <param name="inputs">
+                <collection type="list">
+                    <element name="6W37_A.hhr" value="6W37_A.hhr" />
+                    <element name="6W4H_A.hhr" value="6W4H_A.hhr" />
+                    <element name="6W4H_B.hhr" value="6W4H_B.hhr" />
+                    <element name="6W9C_A.hhr" value="6W9C_A.hhr" />
+                    <element name="6W9Q_A.hhr" value="6W9Q_A.hhr" />
+                    <element name="6WEY_A.hhr" value="6WEY_A.hhr" />
+                    <element name="6WJI_A.hhr" value="6WJI_A.hhr" />
+                    <element name="6WLC_A.hhr" value="6WLC_A.hhr" />
+                </collection>
+            </param>
+            <param name="crossreference" value="dbCAN_random.txt"/>
+            <output name="output" file="dbCAN_result.txt"/>
+        </test>
+        <test>
             <param name="target" value="NP_000282.1.hhr"/>
             <param name="inputs">
                 <collection type="list">
@@ -30,8 +48,8 @@
                     <element name="NP_000836.2.hhr" value="NP_000836.2.hhr" />
                 </collection>
             </param>
-            <param name="crossreference" value="index.txt"/>
-            <output name="output" file="result.txt"/>
+            <param name="crossreference" value="pdb70_random.txt"/>
+            <output name="output" file="pdb70_result.txt"/>
         </test>
     </tests>
     <help><![CDATA[