diff spring_minz.xml @ 2:cc21dac19d25 draft

"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1-dirty"

--- a/spring_minz.xml	Fri Jul 31 00:32:28 2020 -0400
+++ b/spring_minz.xml	Fri Jul 31 01:49:36 2020 -0400
@@ -3,10 +3,14 @@
     <code file="spring_minz.py"/>
     <command detect_errors="exit_code"><![CDATA[
         mkdir -p inputs &&
-        #for input in $inputs:
-            link '${str(input)}' 'inputs/${input.name}' &&
-            echo '${input.name}' >> 'input_list' &&
-        #end for &&
+        #for input in $inputs
+            #try
+                ln -s '${str(input)}' 'inputs/${input.name}' &&
+                echo '${input.name}' >> 'input_list' &&
+            #except
+                #pass
+            #end try
+        #end for
         python3 '$__tool_directory__/spring_minz.py' -m '$minscore' -t '$target' -c '$crossreference' -o '$output' -l input_list -i inputs
     ]]></command>
     <inputs>