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view test-data/6W9Q_A.hhr @ 12:0ea00dce62ab draft

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"planemo upload commit 373d73ef3a09902e75f10084e30b271d84a6d7b1"
author guerler
date Fri, 25 Sep 2020 19:39:11 +0000
parents 860bd6f8f480
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Query         6W9Q_A
Match_columns 123
No_of_seqs    1 out of 1
Neff          1
Searched_HMMs 641
Date          Sat Aug  1 03:09:07 2020
Command       hhsearch -e 0.001 -i /Users/guerler/galaxy/database/files/000/dataset_685.dat -d hhdb -o /Users/guerler/galaxy/database/files/000/dataset_832.dat 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 AJP22991.1|PL8_1.hmm|1.4e-102|   4.4       6  0.0093   22.3   0.0   21   37-57      7-27  (271)
  2 ACE81431.1|GH5_15.hmm|2.3e-124   4.2     6.2  0.0097   22.5   0.0   31   29-61    223-253 (300)
  3 CAG81347.1|CBM19|426-466|7e-13   3.5       8   0.012   16.1   0.0    9   21-29     33-41  (44)
  4 ATY34423.1|PL10_2.hmm|5.1e-141   2.8      10   0.016   21.0   0.0   58   13-70    168-226 (275)
  5 AAK94929.1|CBM55|16-61|2.6e-25   2.3      13    0.02   15.5   0.0   11   19-29     25-35  (46)
  6 ABS47913.1|PL8_2.hmm|2.6e-99|6   2.0      15   0.024   19.3   0.0   17   59-78     57-73  (248)
  7 SCV09658.1|GH137                 2.0      15   0.024   20.7   0.0   31   37-69    210-248 (367)
  8 EEO46747.1|CBM58|202-318|3.8e-   2.0      16   0.025   17.7   0.0   12   93-104    37-48  (116)
  9 QDM21448.1|AA3||6-537            1.7      19   0.029   21.2   0.0   33   50-83     80-112 (644)
 10 CBJ37966.1|GH28|235-654|7.7e-4   1.7      19   0.029   18.3   0.0   17   18-34      3-19  (345)

No 1
>AJP22991.1|PL8_1.hmm|1.4e-102|443-692
Probab=4.39  E-value=6  Score=22.31  Aligned_cols=21  Identities=43%  Similarity=0.604  Sum_probs=16.8  Template_Neff=2.700

Q 6W9Q_A           37 NALAYYNTTKGGRFVLALLSD   57 (123)
Q Consensus        37 nalayynttkggrfvlallsd   57 (123)
                      .-++|||..++=-|.|.+-|+
T Consensus         7 Dkl~y~Na~~dF~FaLSm~S~   27 (271)
T AJP22991.1|PL8    7 DKLAYYNAEKDFAFGLSMHSK   27 (271)
Confidence            357899998888888888765


No 2
>ACE81431.1|GH5_15.hmm|2.3e-124|99-401
Probab=4.23  E-value=6.2  Score=22.52  Aligned_cols=31  Identities=32%  Similarity=0.473  Sum_probs=17.3  Template_Neff=2.300

Q 6W9Q_A           29 TQTACTDDNALAYYNTTKGGRFVLALLSDLQDL   61 (123)
Q Consensus        29 tqtactddnalayynttkggrfvlallsdlqdl   61 (123)
                      -+++|+||-  .---.+--|.+-|..=+++|+-
T Consensus       223 i~tsCtd~~--~~~~p~ivGEWSLsvpdn~q~t  253 (300)
T ACE81431.1|GH5  223 IETSCTDDV--NTHGPTIVGEWSLSVPDNVQDT  253 (300)
Confidence            467888882  1111233466667666666653


No 3
>CAG81347.1|CBM19|426-466|7e-13
Probab=3.47  E-value=8  Score=16.11  Aligned_cols=9  Identities=44%  Similarity=0.892  Sum_probs=6.1  Template_Neff=3.400

Q 6W9Q_A           21 QMSCAAGTT   29 (123)
Q Consensus        21 qmscaagtt   29 (123)
                      .+.|++|++
T Consensus        33 ~~~Cp~gt~   41 (44)
T CAG81347.1|CBM   33 TTECPSGTT   41 (44)
Confidence            467777765


No 4
>ATY34423.1|PL10_2.hmm|5.1e-141|81-355
Probab=2.82  E-value=10  Score=21.01  Aligned_cols=58  Identities=19%  Similarity=0.363  Sum_probs=37.2  Template_Neff=2.400

Q 6W9Q_A           13 ELSPVALRQMSCAAGTTQTACTD-DNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSD   70 (123)
Q Consensus        13 elspvalrqmscaagttqtactd-dnalayynttkggrfvlallsdlqdlkwarfpksd   70 (123)
                      ++.|+--|-.--+|=+++|.|+. .+-+-||.-|..-+|.-.+=..+.=|.-.++|...
T Consensus       168 dl~Pa~ARtyEP~a~~~htTa~~i~~l~~fY~lTgD~kyLaripeAi~wLesvk~p~~~  226 (275)
T ATY34423.1|PL1  168 DLKPAGARTYEPAALATHTTAANIRQLMDFYELTGDKKYLARIPEAIDWLESVKLPPDQ  226 (275)
Confidence            56777777666565555555554 34567888888877765555545555556677766


No 5
>AAK94929.1|CBM55|16-61|2.6e-25
Probab=2.30  E-value=13  Score=15.48  Aligned_cols=11  Identities=36%  Similarity=0.724  Sum_probs=7.6  Template_Neff=2.700

Q 6W9Q_A           19 LRQMSCAAGTT   29 (123)
Q Consensus        19 lrqmscaagtt   29 (123)
                      -.+|+|.+|+.
T Consensus        25 ~~~~~C~~gtv   35 (46)
T AAK94929.1|CBM   25 GKPMKCPGGTV   35 (46)
Confidence            35678888863


No 6
>ABS47913.1|PL8_2.hmm|2.6e-99|635-880
Probab=2.03  E-value=15  Score=19.29  Aligned_cols=17  Identities=41%  Similarity=0.851  Sum_probs=11.8  Template_Neff=4.100

Q 6W9Q_A           59 QDLKWARFPKSDGTGTIYTE   78 (123)
Q Consensus        59 qdlkwarfpksdgtgtiyte   78 (123)
                      .-..|.|+|   ||-||...
T Consensus        57 ~GWDWNR~P---GtTtihLP   73 (248)
T ABS47913.1|PL8   57 EGWDWNRYP---GTTTIHLP   73 (248)
Confidence            457899998   56666543


No 7
>SCV09658.1|GH137
Probab=2.03  E-value=15  Score=20.73  Aligned_cols=31  Identities=35%  Similarity=0.761  Sum_probs=22.2  Template_Neff=2.600

Q 6W9Q_A           37 NALAYYNTT--------KGGRFVLALLSDLQDLKWARFPKS   69 (123)
Q Consensus        37 nalayyntt--------kggrfvlallsdlqdlkwarfpks   69 (123)
                      .-.-|||..        ++-|.-+|.-.|+  +.|.||++.
T Consensus       210 ~FvmyYNA~g~s~~~~~k~EriGmAvS~Dm--~~W~Ry~~n  248 (367)
T SCV09658.1|GH1  210 PFVMYYNAKGDSLKNNKKGERIGMAVSDDM--VHWKRYGKN  248 (367)
Confidence            345677754        5578888887777  469999875


No 8
>EEO46747.1|CBM58|202-318|3.8e-68
Probab=1.97  E-value=16  Score=17.68  Aligned_cols=12  Identities=50%  Similarity=0.949  Sum_probs=8.9  Template_Neff=1.700

Q 6W9Q_A           93 PKVKYLYFIKGL  104 (123)
Q Consensus        93 pkvkylyfikgl  104 (123)
                      ...|||||-.|+
T Consensus        37 ~~akYLY~Gegi   48 (116)
T EEO46747.1|CBM   37 DGAKYLYFGEGI   48 (116)
Confidence            345999997765


No 9
>QDM21448.1|AA3||6-537
Probab=1.71  E-value=19  Score=21.21  Aligned_cols=33  Identities=24%  Similarity=0.487  Sum_probs=15.6  Template_Neff=4.300

Q 6W9Q_A           50 FVLALLSDLQDLKWARFPKSDGTGTIYTELEPPC   83 (123)
Q Consensus        50 fvlallsdlqdlkwarfpksdgtgtiyteleppc   83 (123)
                      ||--...|-++.+-...--.-..|++|+ +.||-
T Consensus        80 fv~hy~d~~~~~r~~~~t~~~~~G~~yv-~~pP~  112 (644)
T QDM21448.1|AA3   80 FVRHYADDTRQARDPKYTYRTPDGGYYV-LDPPA  112 (644)
Confidence            4444444333333222222345677887 66653


No 10
>CBJ37966.1|GH28|235-654|7.7e-46
Probab=1.70  E-value=19  Score=18.26  Aligned_cols=17  Identities=35%  Similarity=0.651  Sum_probs=7.9  Template_Neff=6.800

Q 6W9Q_A           18 ALRQMSCAAGTTQTACT   34 (123)
Q Consensus        18 alrqmscaagttqtact   34 (123)
                      .|.|-.|.|..-..+|.
T Consensus         3 ~~~~~~~~~~~~~~~~~   19 (345)
T CBJ37966.1|GH2    3 NLAQTACTASWAAAACA   19 (345)
Confidence            34444554444444443