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view test-data/6W37_A.hhr @ 15:4a4888bf0338 draft

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"planemo upload commit 5520427eafa1144d04445e0b87112a7ff615aed1"
author guerler
date Sun, 27 Sep 2020 20:52:58 +0000
parents 860bd6f8f480
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Query         6W37_A
Match_columns 66
No_of_seqs    1 out of 1
Neff          1
Searched_HMMs 641
Date          Sat Aug  1 03:09:11 2020
Command       hhsearch -e 0.001 -i /Users/guerler/galaxy/database/files/000/dataset_684.dat -d hhdb -o /Users/guerler/galaxy/database/files/000/dataset_833.dat 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 CAG81347.1|CBM19|426-466|7e-13  38.5    0.21 0.00033   21.3   0.0   25   32-56     16-40  (44)
  2 BAE59978.1|GT59|35-538|9.4e-14   5.4     4.6  0.0072   21.6   0.0   12   27-38    308-321 (418)
  3 ADI26643.1|GH52|20-439|6.2e-21   3.7     7.4   0.012   21.0   0.0   30   25-54    141-176 (418)
  4 AWM09982.1|GH5_39.hmm|1.8e-97|   2.6      11   0.018   18.6   0.0   26   15-40    153-178 (305)
  5 ACY95489.1|CBM14|33-88|9.4e-16   2.4      12   0.019   14.0   0.0   18    5-24     29-46  (81)
  6 ABO94043.1|GH5_32.hmm|1.7e-156   2.4      13    0.02   19.2   0.0   17   45-61    238-254 (341)
  7 ABQ06203.1|PL36.hmm|2.8e-93|60   2.0      15   0.024   17.3   0.0   15   43-57     75-89  (197)
  8 AXR41035.1|GH43_27.hmm|1.6e-11   2.0      16   0.025   18.3   0.0   18   48-65      2-19  (323)
  9 CCA69005.1|AA7||49-484           1.9      16   0.025   18.9   0.0   10   57-66     34-43  (456)
 10 CAA54566.1|PL22|32-145|1.6e-32   1.9      17   0.026   15.9   0.0   22   41-62     21-42  (177)

No 1
>CAG81347.1|CBM19|426-466|7e-13
Probab=38.48  E-value=0.21  Score=21.26  Aligned_cols=25  Identities=32%  Similarity=0.473  Sum_probs=20.7  Template_Neff=3.400

Q 6W37_A           32 HPLADNKFALTCFSTQFAFACPDGV   56 (66)
Q Consensus        32 hpladnkfaltcfstqfafacpdgv   56 (66)
                      .=-+|.||++.-+..-.-+.||.|.
T Consensus        16 sCt~~g~f~iC~~G~WV~~~Cp~gt   40 (44)
T CAG81347.1|CBM   16 ACTADGKFAVCDHGKWVTTECPSGT   40 (44)
Confidence            3346889999999988899999886


No 2
>BAE59978.1|GT59|35-538|9.4e-149
Probab=5.38  E-value=4.6  Score=21.57  Aligned_cols=12  Identities=50%  Similarity=0.609  Sum_probs=8.3  Template_Neff=4.400

Q 6W37_A           27 GNSPFHP--LADNK   38 (66)
Q Consensus        27 gnspfhp--ladnk   38 (66)
                      -++..||  ||||+
T Consensus       308 ~fTivHPflLADNR  321 (418)
T BAE59978.1|GT5  308 FFTIVHPFLLADNR  321 (418)
Confidence            3566677  78885


No 3
>ADI26643.1|GH52|20-439|6.2e-219
Probab=3.69  E-value=7.4  Score=20.97  Aligned_cols=30  Identities=17%  Similarity=0.271  Sum_probs=17.5  Template_Neff=2.800

Q 6W37_A           25 YEGNSPFHPLA------DNKFALTCFSTQFAFACPD   54 (66)
Q Consensus        25 yegnspfhpla------dnkfaltcfstqfafacpd   54 (66)
                      |||+.|+.|+.      +.+..=.....+.+||+++
T Consensus       141 ~eg~~~~s~mr~l~d~~~~~~~G~~~gr~~g~at~~  176 (418)
T ADI26643.1|GH5  141 LEGTDPYSSMRRISDDTDGQLIGVGQGRITGIATNS  176 (418)
Confidence            67887776654      2344434445566777765


No 4
>AWM09982.1|GH5_39.hmm|1.8e-97|57-349
Probab=2.60  E-value=11  Score=18.56  Aligned_cols=26  Identities=23%  Similarity=0.267  Sum_probs=19.6  Template_Neff=4.500

Q 6W37_A           15 LLKEPCSSGTYEGNSPFHPLADNKFA   40 (66)
Q Consensus        15 llkepcssgtyegnspfhpladnkfa   40 (66)
                      |+-.|+.-+.+|+---++||+|.+..
T Consensus       153 lIv~g~~w~~~e~L~~l~PlaD~Nvv  178 (305)
T AWM09982.1|GH5  153 LIVSGANWQRIESLVALRPLADPNVI  178 (305)
Confidence            44456666678889999999998754


No 5
>ACY95489.1|CBM14|33-88|9.4e-16
Probab=2.45  E-value=12  Score=14.02  Aligned_cols=18  Identities=39%  Similarity=0.743  Sum_probs=10.1  Template_Neff=6.300

Q 6W37_A            5 YQECVRGTTVLLKEPCSSGT   24 (66)
Q Consensus         5 yqecvrgttvllkepcssgt   24 (66)
                      |-.|+.|..++  ..|..|.
T Consensus        29 Yy~C~~g~~~~--~~Cp~g~   46 (81)
T ACY95489.1|CBM   29 YYICVNGKPVE--FSCPPGL   46 (81)
Confidence            55676665433  3666554


No 6
>ABO94043.1|GH5_32.hmm|1.7e-156|162-501
Probab=2.36  E-value=13  Score=19.21  Aligned_cols=17  Identities=35%  Similarity=0.595  Sum_probs=10.6  Template_Neff=2.300

Q 6W37_A           45 STQFAFACPDGVKHVYQ   61 (66)
Q Consensus        45 stqfafacpdgvkhvyq   61 (66)
                      ++.-||+|.|-+.+|-|
T Consensus       238 ~~Gca~sCsD~~e~va~  254 (341)
T ABO94043.1|GH5  238 PRGCAFSCSDSEEQVAQ  254 (341)
Confidence            34457777777776543


No 7
>ABQ06203.1|PL36.hmm|2.8e-93|60-255
Probab=2.05  E-value=15  Score=17.27  Aligned_cols=15  Identities=33%  Similarity=0.722  Sum_probs=11.5  Template_Neff=1.000

Q 6W37_A           43 CFSTQFAFACPDGVK   57 (66)
Q Consensus        43 cfstqfafacpdgvk   57 (66)
                      --|..|.+-||.|..
T Consensus        75 ggsarfmwycpngsn   89 (197)
T ABQ06203.1|PL3   75 GGSARFMWYCPNGSN   89 (197)
Confidence            347788899998864


No 8
>AXR41035.1|GH43_27.hmm|1.6e-119|344-677
Probab=1.96  E-value=16  Score=18.30  Aligned_cols=18  Identities=56%  Similarity=0.637  Sum_probs=14.2  Template_Neff=3.500

Q 6W37_A           48 FAFACPDGVKHVYQLRAR   65 (66)
Q Consensus        48 fafacpdgvkhvyqlrar   65 (66)
                      ||-|-|-||-.|.|-|.|
T Consensus         2 ~~~~~~~~~~~~~~~~~R   19 (323)
T AXR41035.1|GH4    2 FADAQPTGVLDVVQTRGR   19 (323)
Confidence            566788999888887765


No 9
>CCA69005.1|AA7||49-484
Probab=1.92  E-value=16  Score=18.89  Aligned_cols=10  Identities=50%  Similarity=0.408  Sum_probs=6.3  Template_Neff=4.100

Q 6W37_A           57 KHVYQLRARS   66 (66)
Q Consensus        57 khvyqlrars   66 (66)
                      ++=.|+|+||
T Consensus        34 ~~gv~vr~RS   43 (456)
T CCA69005.1|AA7   34 KLGVQVRIRS   43 (456)
Confidence            3336778776


No 10
>CAA54566.1|PL22|32-145|1.6e-32
Probab=1.89  E-value=17  Score=15.88  Aligned_cols=22  Identities=23%  Similarity=0.264  Sum_probs=14.4  Template_Neff=5.400

Q 6W37_A           41 LTCFSTQFAFACPDGVKHVYQL   62 (66)
Q Consensus        41 ltcfstqfafacpdgvkhvyql   62 (66)
                      .+--|..+-|..|||.+-.|+.
T Consensus        21 ~~~dg~~~~f~~~d~~~~~~~~   42 (177)
T CAA54566.1|PL2   21 FEGDGCTHEFWVPDGSAFDYVS   42 (177)
Confidence            3344667788888887665543