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view test-data/6W4H_B.hhr @ 21:5feab7f00f02 draft

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"planemo upload commit b0ede77caf410ab69043d33a44e190054024d340-dirty"
author guerler
date Wed, 28 Oct 2020 05:34:36 +0000
parents 860bd6f8f480
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Query         6W4H_B
Match_columns 121
No_of_seqs    1 out of 1
Neff          1
Searched_HMMs 641
Date          Sat Aug  1 03:09:04 2020
Command       hhsearch -e 0.001 -i /Users/guerler/galaxy/database/files/000/dataset_687.dat -d hhdb -o /Users/guerler/galaxy/database/files/000/dataset_830.dat 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 CAR47543.1|CBM41|103-205|3.4e-   8.7     2.5  0.0038   19.7   0.0   27   76-102    41-67  (106)
  2 ACD98010.1|GH129||3-627          3.5     7.8   0.012   24.0   0.0   15    4-18    235-249 (657)
  3 ACI15933.1|GH162|22-524          3.3     8.6   0.013   23.0   0.0   59    5-72    186-244 (498)
  4 ACY95489.1|CBM14|33-88|9.4e-16   3.0     9.7   0.015   16.0   0.0   25   93-120    43-68  (81)
  5 ABN52033.1|CE3|36-223|2.1e-57    2.4      13    0.02   18.3   0.0   12   68-79    177-188 (195)
  6 AAI70505.1|CBM47|47-174|1.7e-4   2.2      13   0.021   16.9   0.0   12   77-88    106-117 (128)
  7 BAE59978.1|GT59|35-538|9.4e-14   2.2      14   0.021   20.8   0.0   28   45-73      3-30  (418)
  8 AJQ99710.1|GH13_18.hmm|7.1e-11   1.9      16   0.026   19.9   0.0   32    6-37    229-261 (343)
  9 AIQ50255.1|CBM77|PL1||627-727    1.7      19    0.03   16.8   0.0   14   17-30     30-43  (103)
 10 CAA44713.1|GT15|70-340|4.1e-13   1.7      19    0.03   18.9   0.0   16    5-20    228-243 (279)

No 1
>CAR47543.1|CBM41|103-205|3.4e-19
Probab=8.71  E-value=2.5  Score=19.70  Aligned_cols=27  Identities=22%  Similarity=0.425  Sum_probs=22.3  Template_Neff=6.300

Q 6W4H_B           76 CDLKGKYVQIPTTCANDPVGFTLLKNT  102 (121)
Q Consensus        76 cdlkgkyvqipttcandpvgftllknt  102 (121)
                      -|--|+|+.||..-....+||.+.++.
T Consensus        41 ~D~yGay~~v~l~~~~~~vgfIv~~~~   67 (106)
T CAR47543.1|CBM   41 KDDYGAYADVPLKEGASKIGFIVRNGD   67 (106)
Confidence            345799999999888888999998854


No 2
>ACD98010.1|GH129||3-627
Probab=3.53  E-value=7.8  Score=23.98  Aligned_cols=15  Identities=47%  Similarity=0.831  Sum_probs=12.4  Template_Neff=2.800

Q 6W4H_B            4 VDAAKAYKDYLASSG   18 (121)
Q Consensus         4 vdaakaykdylassg   18 (121)
                      ||.||+|+.|...+|
T Consensus       235 vdmaK~YR~ya~e~G  249 (657)
T ACD98010.1|GH1  235 VDMCKAYRSYANERG  249 (657)
Confidence            788999999977665


No 3
>ACI15933.1|GH162|22-524
Probab=3.28  E-value=8.6  Score=22.96  Aligned_cols=59  Identities=20%  Similarity=0.374  Sum_probs=38.9  Template_Neff=3.000

Q 6W4H_B            5 DAAKAYKDYLASSGGQPITNCVKMLCTHTGTGQAITVVTTPEANMDQESFGGASCCLYCRCHIDHPNP   72 (121)
Q Consensus         5 daakaykdylassggqpitncvkmlcthtgtgqaitvvttpeanmdqesfggascclycrchidhpnp   72 (121)
                      +.||.|..|+.-    -+.|.+++.-.-.|-=.|+|.+..-.+.+....+...     |.|++|.|-.
T Consensus       186 ~La~rw~~~~~~----m~~na~~iFY~g~G~I~aVt~I~d~~~~~~~~~Y~~~-----~~~~LdDPYE  244 (498)
T ACI15933.1|GH1  186 DLAKRWQAWLDY----MANNAATIFYNGNGKIRAVTQIKDISAPVTPNNYQNE-----GTCYLDDPYE  244 (498)
Confidence            456666666543    3456777776666666677777666666666666655     7889998864


No 4
>ACY95489.1|CBM14|33-88|9.4e-16
Probab=2.96  E-value=9.7  Score=15.97  Aligned_cols=25  Identities=24%  Similarity=0.383  Sum_probs=12.9  Template_Neff=6.300

Q 6W4H_B           93 PVGFTLLKNTTVCTVCGMWKGY-GCSCDQ  120 (121)
Q Consensus        93 pvgftllknttvctvcgmwkgy-gcscdq  120 (121)
                      |.|+..-..+..|..   ..-. .||||.
T Consensus        43 p~g~~FD~~~~~C~~---~~~v~~C~~~~   68 (81)
T ACY95489.1|CBM   43 PPGLVFDPETQTCDW---PENVDDCSNCS   68 (81)
Confidence            345555555555533   2223 588875


No 5
>ABN52033.1|CE3|36-223|2.1e-57
Probab=2.35  E-value=13  Score=18.27  Aligned_cols=12  Identities=33%  Similarity=0.700  Sum_probs=8.1  Template_Neff=5.600

Q 6W4H_B           68 DHPNPKGFCDLK   79 (121)
Q Consensus        68 dhpnpkgfcdlk   79 (121)
                      -|||..|+-.+.
T Consensus       177 vHPn~~Gy~kmA  188 (195)
T ABN52033.1|CE3  177 VHPNDAGYKKMA  188 (195)
Confidence            489988865443


No 6
>AAI70505.1|CBM47|47-174|1.7e-41
Probab=2.25  E-value=13  Score=16.85  Aligned_cols=12  Identities=25%  Similarity=0.728  Sum_probs=9.4  Template_Neff=5.800

Q 6W4H_B           77 DLKGKYVQIPTT   88 (121)
Q Consensus        77 dlkgkyvqiptt   88 (121)
                      .++|+||.|--.
T Consensus       106 ~~~GRYV~V~l~  117 (128)
T AAI70505.1|CBM  106 GMEGRYVRVVLP  117 (128)
Confidence            589999987654


No 7
>BAE59978.1|GT59|35-538|9.4e-149
Probab=2.21  E-value=14  Score=20.79  Aligned_cols=28  Identities=39%  Similarity=0.606  Sum_probs=22.2  Template_Neff=4.400

Q 6W4H_B           45 PEANMDQESFGGASCCLYCRCHIDHPNPK   73 (121)
Q Consensus        45 peanmdqesfggascclycrchidhpnpk   73 (121)
                      ||.-|| |.|-=..+=-||+-+-++=+||
T Consensus         3 pePYmD-EiFHIpQaQ~YC~G~f~~WDpK   30 (418)
T BAE59978.1|GT5    3 PEPYMD-EIFHIPQAQRYCRGRFRQWDPK   30 (418)
Confidence            667777 6677777888999998887776


No 8
>AJQ99710.1|GH13_18.hmm|7.1e-110|80-422
Probab=1.91  E-value=16  Score=19.88  Aligned_cols=32  Identities=28%  Similarity=0.365  Sum_probs=23.3  Template_Neff=4.200

Q 6W4H_B            6 AAKAYKDYLASSGG-QPITNCVKMLCTHTGTGQ   37 (121)
Q Consensus         6 aakaykdylassgg-qpitncvkmlcthtgtgq   37 (121)
                      -+++.++++++... +.-++++.+|-+|-|-|-
T Consensus       229 ~~~~L~~W~~~~p~~~~~~~~fnflasHDGIGl  261 (343)
T AJQ99710.1|GH1  229 NARALAKWLKSLPPPSDGTTYFNFLASHDGIGL  261 (343)
Confidence            35667777776544 445789999999999874


No 9
>AIQ50255.1|CBM77|PL1||627-727
Probab=1.67  E-value=19  Score=16.83  Aligned_cols=14  Identities=29%  Similarity=0.617  Sum_probs=10.7  Template_Neff=2.600

Q 6W4H_B           17 SGGQPITNCVKMLC   30 (121)
Q Consensus        17 sggqpitncvkmlc   30 (121)
                      ..|...|.|.||--
T Consensus        30 YnGltLTqcLKiEs   43 (103)
T AIQ50255.1|CBM   30 YNGLTLTQCLKIES   43 (103)
Confidence            35778899999853


No 10
>CAA44713.1|GT15|70-340|4.1e-134
Probab=1.67  E-value=19  Score=18.92  Aligned_cols=16  Identities=44%  Similarity=0.769  Sum_probs=11.2  Template_Neff=4.200

Q 6W4H_B            5 DAAKAYKDYLASSGGQ   20 (121)
Q Consensus         5 daakaykdylassggq   20 (121)
                      ++-.+|-+||.++||.
T Consensus       228 ~~Y~~yF~~LD~~GGF  243 (279)
T CAA44713.1|GT1  228 EAYRDYFEYLDKSGGF  243 (279)
Confidence            3445667788888884