Mercurial > repos > guerler > springsuite

view test-data/6WJI_A.hhr @ 18:c1eeb502f7ff draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit b0ede77caf410ab69043d33a44e190054024d340-dirty"
author guerler
date Wed, 28 Oct 2020 05:13:36 +0000
parents 860bd6f8f480
children
line wrap: on
line source

Query         6WJI_A
Match_columns 108
No_of_seqs    1 out of 1
Neff          1
Searched_HMMs 641
Date          Sat Aug  1 03:09:16 2020
Command       hhsearch -e 0.001 -i /Users/guerler/galaxy/database/files/000/dataset_682.dat -d hhdb -o /Users/guerler/galaxy/database/files/000/dataset_835.dat 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 ADJ39760.1|GT63|1-340|1.6e-218  12.6     1.5  0.0023   26.0   0.0   24   81-104    49-72  (340)
  2 ABV04693.1|GH104|4-149|1.2e-65   6.8     3.4  0.0053   20.8   0.0   26   71-96     65-90  (144)
  3 ADF51355.1|GH89|74-731|1.3e-27   4.6     5.6  0.0088   23.9   0.0   43   51-93    168-217 (663)
  4 AOH85032.1|PL22_2.hmm|9.2e-63|   3.3     8.3   0.013   20.7   0.0   23   58-80    200-228 (238)
  5 AFR03652.1|PL2_1.hmm|0|24-554    3.1     9.1   0.014   22.4   0.0   22    2-23    232-253 (529)
  6 AAM43285.1|GH43_9.hmm|1.1e-139   3.1     9.1   0.014   21.0   0.0   16   27-42      7-22  (292)
  7 ADB10624.1|GH53|89-472|9e-82     2.9     9.8   0.015   20.6   0.0   46   53-106   127-173 (341)
  8 ABS49747.1|PL2|17-549|2.7e-271   2.9      10   0.016   22.4   0.0   33    2-34    234-270 (530)
  9 ADL41529.1|CBM27|38-215|8.3e-5   2.8      10   0.016   18.6   0.0   21   65-85    143-163 (166)
 10 CCH00347.1|GH43_15.hmm|2e-122|   2.7      11   0.017   20.5   0.0   24   36-59     37-60  (276)

No 1
>ADJ39760.1|GT63|1-340|1.6e-218
Probab=12.60  E-value=1.5  Score=25.95  Aligned_cols=24  Identities=29%  Similarity=0.474  Sum_probs=21.0  Template_Neff=1.400

Q 6WJI_A           81 IKLDDKDPNFKDQVILLNKHIDAY  104 (108)
Q Consensus        81 iklddkdpnfkdqvillnkhiday  104 (108)
                      +..||-|||--|.||..|..|.-|
T Consensus        49 ~~fd~vd~n~ydr~~vvn~s~nf~   72 (340)
T ADJ39760.1|GT6   49 KSFDEVDVNDYDRLIVVNSSINFF   72 (340)
Confidence            568999999999999999888755


No 2
>ABV04693.1|GH104|4-149|1.2e-65
Probab=6.81  E-value=3.4  Score=20.75  Aligned_cols=26  Identities=38%  Similarity=0.603  Sum_probs=22.8  Template_Neff=4.400

Q 6WJI_A           71 SGTWLTYTGAIKLDDKDPNFKDQVIL   96 (108)
Q Consensus        71 sgtwltytgaiklddkdpnfkdqvil   96 (108)
                      +.||-.|...++|.|-.|...|++.+
T Consensus        65 ~~tW~~~~~~l~l~dFsP~~QD~~A~   90 (144)
T ABV04693.1|GH1   65 SRTWDEYRKQLGLPDFSPESQDRVAL   90 (144)
Confidence            45899999999999999999999764


No 3
>ADF51355.1|GH89|74-731|1.3e-276
Probab=4.59  E-value=5.6  Score=23.93  Aligned_cols=43  Identities=28%  Similarity=0.493  Sum_probs=33.7  Template_Neff=4.700

Q 6WJI_A           51 FAPSASAFFGMSRIG-------MEVTPSGTWLTYTGAIKLDDKDPNFKDQ   93 (108)
Q Consensus        51 fapsasaffgmsrig-------mevtpsgtwltytgaiklddkdpnfkdq   93 (108)
                      ..|-..+|.|+---+       ..|++-|.|-.+...--||..||-|..-
T Consensus       168 MtPVLPaF~G~VP~~f~~~~P~a~i~~~g~W~gF~~~~~LdP~dplF~~I  217 (663)
T ADF51355.1|GH8  168 MTPVLPAFAGHVPAAFKEKNPDAKITRQGNWGGFDRPYFLDPEDPLFAKI  217 (663)
Confidence            356677787775443       4788999999999988999999998753


No 4
>AOH85032.1|PL22_2.hmm|9.2e-63|205-432
Probab=3.34  E-value=8.3  Score=20.73  Aligned_cols=23  Identities=30%  Similarity=0.764  Sum_probs=15.6  Template_Neff=2.600

Q 6WJI_A           58 FFGMSRIG------MEVTPSGTWLTYTGA   80 (108)
Q Consensus        58 ffgmsrig------mevtpsgtwltytga   80 (108)
                      ...|++-.      ...||.|.|+.++.-
T Consensus       200 LVnm~~H~Y~lEPN~~FtPDgkw~iFrsN  228 (238)
T AOH85032.1|PL2  200 LVNMSRHNYRLEPNVHFTPDGKWIIFRSN  228 (238)
Confidence            34566543      346899999998764


No 5
>AFR03652.1|PL2_1.hmm|0|24-554
Probab=3.10  E-value=9.1  Score=22.39  Aligned_cols=22  Identities=41%  Similarity=0.611  Sum_probs=18.3  Template_Neff=1.400

Q 6WJI_A            2 PRQKRTATKAYNVTQAFGRRGP   23 (108)
Q Consensus         2 prqkrtatkaynvtqafgrrgp   23 (108)
                      ||.|.|.--.|..||+..|..+
T Consensus       232 prdkktglgvyqftqalkr~et  253 (529)
T AFR03652.1|PL2  232 PRDKKTGLGVYQFTQALKRAET  253 (529)
Confidence            7889999999999999877543


No 6
>AAM43285.1|GH43_9.hmm|1.1e-139|60-332
Probab=3.10  E-value=9.1  Score=21.01  Aligned_cols=16  Identities=38%  Similarity=0.981  Sum_probs=14.0  Template_Neff=2.900

Q 6WJI_A           27 QGNFGDQELIRQGTDY   42 (108)
Q Consensus        27 qgnfgdqelirqgtdy   42 (108)
                      .|+..|..++|.|.||
T Consensus         7 ~Gd~pDPsilRdG~dY   22 (292)
T AAM43285.1|GH4    7 AGDYPDPSILRDGDDY   22 (292)
Confidence            4778899999999988


No 7
>ADB10624.1|GH53|89-472|9e-82
Probab=2.93  E-value=9.8  Score=20.62  Aligned_cols=46  Identities=28%  Similarity=0.414  Sum_probs=32.8  Template_Neff=4.700

Q 6WJI_A           53 PSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDP-NFKDQVILLNKHIDAYKT  106 (108)
Q Consensus        53 psasaffgmsrigmevtpsgtwltytgaiklddkdp-nfkdqvillnkhidaykt  106 (108)
                      -.+...-.|-.||-|+++.=-|        -+.+.+ +|..-.-|||.-|+|-|.
T Consensus       127 ~~~Gv~pdmVQVGNEin~GmlW--------p~G~~~~~~~~~a~LlnaG~~AVr~  173 (341)
T ADB10624.1|GH5  127 KDAGVTPDMVQVGNEINNGMLW--------PDGKSSGNWDNLAQLLNAGIKAVRE  173 (341)
Confidence            4455566788899998876555        233444 788888899998888764


No 8
>ABS49747.1|PL2|17-549|2.7e-271
Probab=2.85  E-value=10  Score=22.35  Aligned_cols=33  Identities=30%  Similarity=0.546  Sum_probs=26.2  Template_Neff=2.800

Q 6WJI_A            2 PRQKRTATKAYNVTQAFGRRG-P---EQTQGNFGDQE   34 (108)
Q Consensus         2 prqkrtatkaynvtqafgrrg-p---eqtqgnfgdqe   34 (108)
                      +|++.|.--.|..+|...|.. |   .+|+.-|||..
T Consensus       234 aR~peTGl~vYQFs~p~~r~~~P~dd~~T~S~~GDRA  270 (530)
T ABS49747.1|PL2  234 ARNPETGLPVYQFSSPLKRQPIPTDDNDTQSWFGDRA  270 (530)
Confidence            577888888999999987665 4   47889999864


No 9
>ADL41529.1|CBM27|38-215|8.3e-50
Probab=2.85  E-value=10  Score=18.61  Aligned_cols=21  Identities=24%  Similarity=0.461  Sum_probs=15.0  Template_Neff=4.500

Q 6WJI_A           65 GMEVTPSGTWLTYTGAIKLDD   85 (108)
Q Consensus        65 gmevtpsgtwltytgaikldd   85 (108)
                      +|.+---|.-+.|+|.|-||.
T Consensus       143 ~l~i~I~G~~~~y~GpIYiDN  163 (166)
T ADL41529.1|CBM  143 QLVIGIAGQNTNYKGPIYIDN  163 (166)
Confidence            344445677888999998875


No 10
>CCH00347.1|GH43_15.hmm|2e-122|40-315
Probab=2.66  E-value=11  Score=20.47  Aligned_cols=24  Identities=29%  Similarity=0.714  Sum_probs=17.4  Template_Neff=2.300

Q 6WJI_A           36 IRQGTDYKHWPQIAQFAPSASAFF   59 (108)
Q Consensus        36 irqgtdykhwpqiaqfapsasaff   59 (108)
                      |-..+|.-||..|....|+++.+.
T Consensus        37 I~~S~DlvhWE~V~R~v~pt~s~~   60 (276)
T CCH00347.1|GH4   37 ILHSTDLVHWERVSRVVPPTWSFL   60 (276)
Confidence            445678889999988777665543