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view test-data/6W9C_A.hhr @ 13:f8ba4dd48cbd draft

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"planemo upload commit 6aa4b0a91f36999fab860591a4e33cdd6dcb70cf"
author guerler
date Sat, 26 Sep 2020 14:30:43 +0000
parents 860bd6f8f480
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Query         6W9C_A
Match_columns 313
No_of_seqs    1 out of 1
Neff          1
Searched_HMMs 641
Date          Sat Aug  1 03:09:06 2020
Command       hhsearch -e 0.001 -i /Users/guerler/galaxy/database/files/000/dataset_686.dat -d hhdb -o /Users/guerler/galaxy/database/files/000/dataset_831.dat 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 ACY47587.1|GH78|346-867|5.6e-2  14.0     1.3   0.002   29.4   0.0   93   67-162   209-319 (496)
  2 AAO76127.1|GH143                 5.8     4.2  0.0066   28.3   0.0   34   63-96    261-299 (574)
  3 AUO30192.1|GH149|2.4.1.-|0|1-1   5.1       5  0.0077   29.9   0.0   53   96-162   947-1007(1153)
  4 AHA42547.2|GH5_2                 4.1     6.5    0.01   21.7   0.0   27    5-31     66-96  (97)
  5 AAW84061.1|PL10.hmm|1e-110|56-   3.6     7.5   0.012   24.2   0.0   86   57-144    37-135 (288)
  6 ADJ39760.1|GT63|1-340|1.6e-218   3.6     7.6   0.012   24.8   0.0   29   44-72    289-329 (340)
  7 ANS64378.1|GH43_22.hmm|8.3e-76   3.0     9.5   0.015   22.6   0.0   16   47-62     17-32  (244)
  8 ACY49347.1|GH105|46-385|1.1e-1   2.1      14   0.022   21.8   0.0   28   90-119   169-196 (329)
  9 ABG84856.1|PL8|420-695|7e-98     1.8      17   0.027   20.6   0.0   14    4-17    152-165 (263)
 10 AHG92795.1|GH43_29.hmm|2.4e-57   1.5      22   0.034   21.2   0.0   24   89-112    52-76  (279)

No 1
>ACY47587.1|GH78|346-867|5.6e-200
Probab=14.01  E-value=1.3  Score=29.37  Aligned_cols=93  Identities=17%  Similarity=0.196  Sum_probs=55.5  Template_Neff=7.200

Q 6W9C_A           67 FEYYHTTDPSFLGRYMSALNHTKKWKYPQVNG--LT------SIKWAD-----N-----NCYLATALLTLQQIELKFNPP  128 (313)
Q Consensus        67 feyyhttdpsflgrymsalnhtkkwkypqvng--lt------sikwad-----n-----ncylatalltlqqielkfnpp  128 (313)
                      --|.++-|.++|.++..++..--.|-..+++.  -.      -..|.+     +     |++++-+|..+.+|.-....+
T Consensus       209 ~~Y~~~GD~~~l~~~y~~~~~~l~~~~~~~~~~g~~~l~~~~~gDW~~~~~~~~~~~~~~a~~~~~l~~~a~lA~~LG~~  288 (496)
T ACY47587.1|GH7  209 DYYRYYGDKEFLEEQYPSMKRWLDYLESRADDDGNWGLWDTGFGDWLDDPPAGGTDLVATAYYYYSLRLMAELAEALGKT  288 (496)
Confidence            34567889999988877776555555555533  11      255555     2     778888888888887777766


Q 6W9C_A          129 ALQDAYYRARAGEAANFCALILAYCNKTVGELGD  162 (313)
Q Consensus       129 alqdayyrarageaanfcalilaycnktvgelgd  162 (313)
                      +.. +.|+.+|.+...  |+.-.+-|..-|...|
T Consensus       289 ~~a-~~y~~~a~~lk~--a~~~~~~~~~~G~y~~  319 (496)
T ACY47587.1|GH7  289 EDA-ARYRALAERLKA--AFNKEFWDPDTGRYAD  319 (496)
Confidence            553 345666555432  2222333444454544


No 2
>AAO76127.1|GH143
Probab=5.76  E-value=4.2  Score=28.33  Aligned_cols=34  Identities=35%  Similarity=0.699  Sum_probs=26.2  Template_Neff=2.500

Q 6W9C_A           63 RVEAFEYYHTTDPSFLGRYMSALN-----HTKKWKYPQV   96 (313)
Q Consensus        63 rveafeyyhttdpsflgrymsaln-----htkkwkypqv   96 (313)
                      ..+||.|||-.|-...|-+-.||-     .-|.|.|+.+
T Consensus       261 ~ykAFsyYhlpDGrvVgLWK~altsiS~D~GktW~y~p~  299 (574)
T AAO76127.1|GH1  261 GYKAFSYYHLPDGRVVGLWKHALTSISEDGGKTWSYNPL  299 (574)
Confidence            358999999999988887776664     3467887654


No 3
>AUO30192.1|GH149|2.4.1.-|0|1-1154
Probab=5.08  E-value=5  Score=29.90  Aligned_cols=53  Identities=36%  Similarity=0.506  Sum_probs=33.5  Template_Neff=3.200

Q 6W9C_A           96 VNGLTSIKWADNNCYLATALLTLQQIELKF-----NP---PALQDAYYRARAGEAANFCALILAYCNKTVGELGD  162 (313)
Q Consensus        96 vngltsikwadnncylatalltlqqielkf-----np---palqdayyrarageaanfcalilaycnktvgelgd  162 (313)
                      -.||-||-|--    .+-.||..|..-++.     ++   .+|.+.||+.|+|-.          .||+-.+-|-
T Consensus       947 YEGLGsIYWHM----VSKLLLAvqE~~~~Ai~~~~~~~~~~~L~~~YyeIr~GIG----------~~KsPe~YGA 1007 (1153)
T AUO30192.1|GH1  947 YEGLGSIYWHM----VSKLLLAVQENCLDAIEQGADSEVIGKLADHYYEIRAGIG----------FNKSPELYGA 1007 (1153)
Confidence            46999999952    333444444433322     32   468999999999954          3566665554


No 4
>AHA42547.2|GH5_2
Probab=4.12  E-value=6.5  Score=21.71  Aligned_cols=27  Identities=33%  Similarity=0.395  Sum_probs=19.9  Template_Neff=1.800

Q 6W9C_A            5 VFTTVDN----INLHTQVVDMSMTYGQQFGP   31 (313)
Q Consensus         5 vfttvdn----inlhtqvvdmsmtygqqfgp   31 (313)
                      =||||++    -+|...|+..+-.|.-|||.
T Consensus        66 gfttVatat~nc~lYiyvkqAp~Sf~lqFgs   96 (97)
T AHA42547.2|GH5   66 GFTTVATATMNCALYIYVKQAPSSFTLQFGS   96 (97)
Confidence            3777775    45667788888888888873


No 5
>AAW84061.1|PL10.hmm|1e-110|56-346
Probab=3.63  E-value=7.5  Score=24.18  Aligned_cols=86  Identities=29%  Similarity=0.338  Sum_probs=59.3  Template_Neff=4.300

Q 6W9C_A           57 PNDDT---LRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYP-----QVNGL-----TSIKWADNNCYLATALLTLQQIEL  123 (313)
Q Consensus        57 pnddt---lrveafeyyhttdpsflgrymsalnhtkkwkyp-----qvngl-----tsikwadnncylatalltlqqiel  123 (313)
                      .|+-|   ||.-|--|-.|.|+.+..-....|+..-+-.||     |+--+     ..|...||-  +.-.|..|+.|.-
T Consensus        37 DN~AT~tei~~LA~~y~~t~~~~Yr~A~~kGl~yLL~aQY~nGGWPQ~yP~~~~Y~~~ITfNDdA--M~~vl~lL~di~~  114 (288)
T AAW84061.1|PL1   37 DNGATTTEIRFLARAYKATGDERYRDAALKGLDYLLAAQYPNGGWPQFYPLRGGYHDHITFNDDA--MVNVLELLRDIAE  114 (288)
Confidence            45544   566677788888888887777777766555543     33322     246666664  4556777788887


Q 6W9C_A          124 KFNPPALQDAYYRARAGEAAN  144 (313)
Q Consensus       124 kfnppalqdayyrarageaan  144 (313)
                      +-+|-++-|+-+|+||.+|.+
T Consensus       115 ~~~~f~fvd~~~r~ra~~A~~  135 (288)
T AAW84061.1|PL1  115 GKPPFDFVDAARRARARQAVD  135 (288)
Confidence            777778888889999988765


No 6
>ADJ39760.1|GT63|1-340|1.6e-218
Probab=3.62  E-value=7.6  Score=24.76  Aligned_cols=29  Identities=34%  Similarity=0.527  Sum_probs=23.1  Template_Neff=1.400

Q 6W9C_A           44 PHNSHEGKTFYV------------LPNDDTLRVEAFEYYHT   72 (313)
Q Consensus        44 phnshegktfyv------------lpnddtlrveafeyyht   72 (313)
                      .||--+...|||            +.|||.||.|..+|-|.
T Consensus       289 ~~~i~~~~~fyv~nr~elid~in~~k~~~~~r~e~l~~qh~  329 (340)
T ADJ39760.1|GT6  289 KHRIINDARFYVNNRAELIDRVNELKHSDVLRKEMLSIQHD  329 (340)
Confidence            366667778887            56889999999999885


No 7
>ANS64378.1|GH43_22.hmm|8.3e-76|54-270
Probab=3.00  E-value=9.5  Score=22.64  Aligned_cols=16  Identities=31%  Similarity=0.746  Sum_probs=13.6  Template_Neff=5.100

Q 6W9C_A           47 SHEGKTFYVLPNDDTL   62 (313)
Q Consensus        47 shegktfyvlpnddtl   62 (313)
                      |++|.+||+++-|+.+
T Consensus        17 s~dgdkfyiiATDL~i   32 (244)
T ANS64378.1|GH4   17 SPDGDKFYIIATDLRI   32 (244)
Confidence            7899999999988654


No 8
>ACY49347.1|GH105|46-385|1.1e-131
Probab=2.15  E-value=14  Score=21.82  Aligned_cols=28  Identities=29%  Similarity=0.627  Sum_probs=22.0  Template_Neff=6.200

Q 6W9C_A           90 KWKYPQVNGLTSIKWADNNCYLATALLTLQ  119 (313)
Q Consensus        90 kwkypqvngltsikwadnncylatalltlq  119 (313)
                      .|--|  .|...+-|+-.|...+.||..+-
T Consensus       169 ~wa~~--t~~s~~fW~RgnGW~~~aL~~~L  196 (329)
T ACY49347.1|GH1  169 NWADP--TGGSPAFWGRGNGWVAMALVDVL  196 (329)
Confidence            34444  78899999999999999887653


No 9
>ABG84856.1|PL8|420-695|7e-98
Probab=1.83  E-value=17  Score=20.63  Aligned_cols=14  Identities=29%  Similarity=0.344  Sum_probs=10.3  Template_Neff=6.200

Q 6W9C_A            4 KVFTTVDNINLHTQ   17 (313)
Q Consensus         4 kvfttvdninlhtq   17 (313)
                      .|.|||||-.+...
T Consensus       152 ~v~TTi~qr~~~~~  165 (263)
T ABG84856.1|PL8  152 PVETTIEQRKLNGK  165 (263)
Confidence            46788888877665


No 10
>AHG92795.1|GH43_29.hmm|2.4e-57|84-380
Probab=1.51  E-value=22  Score=21.20  Aligned_cols=24  Identities=17%  Similarity=0.476  Sum_probs=16.6  Template_Neff=4.100

Q 6W9C_A           89 KKWK-YPQVNGLTSIKWADNNCYLA  112 (313)
Q Consensus        89 kkwk-ypqvngltsikwadnncyla  112 (313)
                      +.|+ ++.+-.++.++||+++.+-+
T Consensus        52 ~nWtdhg~~l~~~~F~WA~~~AwA~   76 (279)
T AHG92795.1|GH4   52 VNWTDHGSVLSPKDFSWAKGDAWAS   76 (279)
Confidence            4554 45677788999998665543