# HG changeset patch # User guerler # Date 1606240642 0 # Node ID 0bcc0a269916a396bb076eff7dcfb8d7d8501b8a # Parent b300ddbbf9d086af92a3fe42ab39084dff843db1 "planemo upload commit 0410e2fadc4e9fc1df6010de7b3678154cbdfe62-dirty" diff -r b300ddbbf9d0 -r 0bcc0a269916 spring_roc.py --- a/spring_roc.py Tue Nov 24 17:55:07 2020 +0000 +++ b/spring_roc.py Tue Nov 24 17:57:22 2020 +0000 @@ -284,12 +284,12 @@ parser = argparse.ArgumentParser(description='Create ROC plot.') parser.add_argument('-i', '--input', help='Input prediction file (2-columns).', required=True) parser.add_argument('-b', '--biogrid', help='BioGRID interaction database file', required=True) - parser.add_argument('-l', '--locations', help='UniProt export table with subcellular locations', default="", required=False) - parser.add_argument('-r', '--regions', help='Comma-separated regions', required=False) - parser.add_argument('-n', '--negative', help='Negative set (2-columns)', default="", required=False) - parser.add_argument('-e', '--experiment', help='Type (physical/genetic)', default="", required=False) - parser.add_argument('-t', '--throughput', help='Throughput (low/high)', default="", required=False) - parser.add_argument('-m', '--method', help='Method e.g. Two-hybrid', default="", required=False) + parser.add_argument('-l', '--locations', help='UniProt export table with subcellular locations', required=False) + parser.add_argument('-r', '--regions', help='Comma-separated subcellular locations', required=False) + parser.add_argument('-n', '--negative', help='Negative set (2-columns)', required=False) + parser.add_argument('-e', '--experiment', help='Type (physical/genetic)', required=False) + parser.add_argument('-t', '--throughput', help='Throughput (low/high)', required=False) + parser.add_argument('-m', '--method', help='Method e.g. Two-hybrid', required=False) parser.add_argument('-o', '--output', help='Output (png)', required=True) args = parser.parse_args() main(args)