# HG changeset patch
# User guerler
# Date 1601062751 0
# Node ID 0ea00dce62ab0719266086920eb5e7d93df78c97
# Parent  21a7dd67b4838f5bd6c434c53c3cfe49d3d8e954
"planemo upload commit 373d73ef3a09902e75f10084e30b271d84a6d7b1"

diff -r 21a7dd67b483 -r 0ea00dce62ab spring_minz.xml
--- a/spring_minz.xml	Fri Sep 25 19:07:14 2020 +0000
+++ b/spring_minz.xml	Fri Sep 25 19:39:11 2020 +0000
@@ -8,8 +8,9 @@
             echo '${input.element_identifier}' >> 'input_list' &&
         #end for
         #for target in $targets
-            python3 '$__tool_directory__/spring_minz.py' -m '$minscore' -t '${str(target)}' -n '${target.element_identifier}' -c '$crossreference' -x '$idx' -o '$output' -l input_list -i inputs
+            python3 '$__tool_directory__/spring_minz.py' -m '$minscore' -t '${str(target)}' -n '${target.element_identifier}' -c '$crossreference' -x '$idx' -o '$output' -l input_list -i inputs &&
         #end for
+        echo 0
     ]]></command>
     <inputs>
         <param format="txt" name="targets" type="data_collection" label="Target Profiles" help="Homology search result of target/query profiles `hhr`."/>
@@ -25,20 +26,29 @@
         <test>
             <param name="targets">
                 <collection type="list">
+                    <element name="6W4H_A.hhr" value="6W4H_A.hhr" />
+                    <element name="6W4H_B.hhr" value="6W4H_B.hhr" />
+                    <element name="6W9C_A.hhr" value="6W9C_A.hhr" />
+                    <element name="6W9Q_A.hhr" value="6W9Q_A.hhr" />
+                    <element name="6W37_A.hhr" value="6W37_A.hhr" />
+                    <element name="6WEY_A.hhr" value="6WEY_A.hhr" />
+                    <element name="6WJI_A.hhr" value="6WJI_A.hhr" />
+                    <element name="6WLC_A.hhr" value="6WLC_A.hhr" />
                     <element name="7BQY_A.hhr" value="7BQY_A.hhr" />
                 </collection>
             </param>
             <param name="idx" value="10"/>
             <param name="inputs">
                 <collection type="list">
-                    <element name="6W37_A.hhr" value="6W37_A.hhr" />
                     <element name="6W4H_A.hhr" value="6W4H_A.hhr" />
                     <element name="6W4H_B.hhr" value="6W4H_B.hhr" />
                     <element name="6W9C_A.hhr" value="6W9C_A.hhr" />
                     <element name="6W9Q_A.hhr" value="6W9Q_A.hhr" />
+                    <element name="6W37_A.hhr" value="6W37_A.hhr" />
                     <element name="6WEY_A.hhr" value="6WEY_A.hhr" />
                     <element name="6WJI_A.hhr" value="6WJI_A.hhr" />
                     <element name="6WLC_A.hhr" value="6WLC_A.hhr" />
+                    <element name="7BQY_A.hhr" value="7BQY_A.hhr" />
                 </collection>
             </param>
             <param name="crossreference" value="dbCAN_random.txt"/>
diff -r 21a7dd67b483 -r 0ea00dce62ab test-data/dbCAN_result.txt
--- a/test-data/dbCAN_result.txt	Fri Sep 25 19:07:14 2020 +0000
+++ b/test-data/dbCAN_result.txt	Fri Sep 25 19:39:11 2020 +0000
@@ -1,3 +1,9 @@
+6W4H_A.hhr 6W4H_A.hhr 24.7
+6W9Q_A.hhr 6W4H_B.hhr 22.3
+6W9Q_A.hhr 6W9C_A.hhr 21.0
+6W37_A.hhr 6W9C_A.hhr 21.3
+6W37_A.hhr 6W4H_B.hhr 16.0
+6W37_A.hhr 6W37_A.hhr 14.0
 7BQY_A.hhr 6W9C_A.hhr 24.2
 7BQY_A.hhr 6W4H_B.hhr 24.0
 7BQY_A.hhr 6W37_A.hhr 14.0