Mercurial > repos > hepcat72 > lumpyexpress
comparison lumpyexpress.xml @ 4:ea7edefc72c3 draft
planemo upload for repository https://github.com/hepcat72/robs_galaxy_tools/tree/master/tools/lumpyexpress commit a1d97ac3e9258a4f7cc1c59161820f55e2cdc347
author | hepcat72 |
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date | Fri, 26 Oct 2018 09:26:19 -0400 |
parents | d637435b1227 |
children | 9697ce23db99 |
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3:d637435b1227 | 4:ea7edefc72c3 |
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1 <tool id="lumpyexpress_0_1" name="lumpyexpress" version="0.1.2"> | 1 <tool id="lumpyexpress_0_1" name="lumpyexpress" version="0.1.3"> |
2 <description>Single or paired end SV detection</description> | 2 <description>Single or paired end SV detection</description> |
3 | 3 |
4 <requirements> | 4 <requirements> |
5 <requirement type="package" version="2.7">python</requirement> | 5 <requirement type="package" version="2.7">python</requirement> |
6 <requirement type="package" version="0.8.3">pysam</requirement> | 6 <requirement type="package" version="0.8.3">pysam</requirement> |
7 <requirement type="package" version="1.13.1">numpy</requirement> | 7 <requirement type="package" version="1.13.1">numpy</requirement> |
8 <requirement type="package" version="0.2.13">lumpy-sv</requirement> | 8 <requirement type="package" version="0.2.14a">lumpy-sv</requirement> |
9 <requirement type="package" version="1.9">samtools</requirement> | 9 <requirement type="package" version="1.9">samtools</requirement> |
10 <requirement type="package" version="0.1.24">samblaster</requirement> | 10 <requirement type="package" version="0.1.24">samblaster</requirement> |
11 <requirement type="package" version="0.6.5">sambamba</requirement> | 11 <requirement type="package" version="0.6.5">sambamba</requirement> |
12 <requirement type="package" version="4.2.1">gawk</requirement> | 12 <requirement type="package" version="4.2.1">gawk</requirement> |
13 </requirements> | 13 </requirements> |