Mercurial > repos > hepcat72 > svtyper
view test-data/test1.bam.json @ 0:00cab3d2e98b draft
planemo upload
author | hepcat72 |
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date | Wed, 15 Aug 2018 15:40:54 -0400 |
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{ "NA12878": { "unmapped": 10201896, "mapped": 1568288008, "bam": "/gscmnt/gc2802/halllab/sv_aggregate/MISC/realigned_BAMs/NA12878/NA12878.bam", "libraryArray": [ { "library_name": "", "prevalence": 1.0, "read_length": 101, "readgroups": [ "NA12878.S1" ], "histogram": { "2": 1, "4": 2, "5": 3, "6": 4, "7": 2, "8": 10, "9": 19, "10": 16, "11": 17, "12": 22, "13": 28, "14": 31, "15": 18, "16": 17, "17": 21, "18": 21, "19": 155, "20": 233, "21": 26, "22": 44, "23": 44, "24": 39, "25": 47, "26": 43, "27": 30, "28": 51, "29": 35, "30": 42, "31": 32, "32": 36, "33": 75, "34": 34, "35": 63, "36": 51, "37": 63, "38": 55, "39": 43, "40": 68, "41": 72, "42": 60, "43": 63, "44": 74, "45": 64, "46": 77, "47": 112, "48": 73, "49": 95, "50": 96, "51": 82, "52": 97, "53": 94, "54": 90, "55": 90, "56": 111, "57": 113, "58": 111, "59": 117, "60": 146, "61": 117, "62": 128, "63": 145, "64": 162, "65": 165, "66": 156, "67": 152, "68": 162, "69": 154, "70": 136, "71": 173, "72": 183, "73": 163, "74": 203, 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