# HG changeset patch # User hogart # Date 1425980708 14400 # Node ID 75a1e3d0842f9a7a76b9571f87852c4e9e401bd2 # Parent 51baa0ab6defc881cde4bec9cbdd206437b082a3 Uploaded README.md diff -r 51baa0ab6def -r 75a1e3d0842f README.md --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.md Tue Mar 10 05:45:08 2015 -0400 @@ -0,0 +1,527 @@ + + + + + + + + + + + + galaxy-tools-unafold/README.md at master · DrHogart/galaxy-tools-unafold · GitHub + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + Skip to content +
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+Galaxy Tool wrapper for UNAFold

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This is the Galaxy wrapper for the UNAFold. UNAFold software was developed for nucleic acid folding and hybridization prediction (doi: 10.1007/978-1-60327-429-6_1, doi: 10.1093/nar/gki591). This wrapper is not yet deposited in the Tool-Shed repository, so this is the single place where it can downloaded.

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+Installation

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  • Save UNAFold.pl in your $PATH, that is accesable to the Galaxy.

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  • Create the directory unafold in $GALAXY_DIR/tools/ and copy unafold.xml and unafold.sh files into it.

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  • Add the Galaxy tool definition to the tools_conf.xml:
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    <section id="unafold_tool" name="UNAFold">
+        <tool file="unafold/unafold.xml" />
+    </section>`
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  • Please, be sure that zip datatype is registered in your Galaxy instance. If not, add the following string to the datatypes_conf.xml file:
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    <datatype extension="zip" type="galaxy.datatypes.binary:Binary" mimetype="application/zip" subclass="True" />
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  • Reload the Galaxy instance.
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