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comparison mutspecFilter.pl @ 5:097ae310ced0 draft

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Uploaded
author iarc
date Fri, 29 Apr 2016 05:14:23 -0400
parents 916846f73e25
children 46a10309dfe2
comparison
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4:916846f73e25 5:097ae310ced0
43 if($listAVDB eq "empty") { $listAVDB = "$dir/${refGenome}_listAVDB.txt" } 43 if($listAVDB eq "empty") { $listAVDB = "$dir/${refGenome}_listAVDB.txt" }
44 44
45 # Zero databases is specified 45 # Zero databases is specified
46 if( ($dbSNP == 0) && ($segDup == 0) && ($esp == 0) && ($thG == 0) ) 46 if( ($dbSNP == 0) && ($segDup == 0) && ($esp == 0) && ($thG == 0) )
47 { 47 {
48 print STDERR "There is no databases selected for filtering against!!!\nPlease chose at least one between dbSNP, SegDup, ESP (only for human genome) or 1000 genome (only for human genome)\n"; 48 print STDERR "There is no databases selected for filtering against!!!\nPlease choose at least one between dbSNP, SegDup, ESP (only for human genome) or 1000 genome (only for human genome)\n";
49 exit; 49 exit;
50 } 50 }
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53 53