Mercurial > repos > iarc > mutspec
comparison mutspecFilter.pl @ 4:916846f73e25 draft
Uploaded
author | iarc |
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date | Fri, 29 Apr 2016 05:11:28 -0400 |
parents | 8c682b3a7c5b |
children | 097ae310ced0 |
comparison
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3:14fe7238c6d7 | 4:916846f73e25 |
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43 if($listAVDB eq "empty") { $listAVDB = "$dir/${refGenome}_listAVDB.txt" } | 43 if($listAVDB eq "empty") { $listAVDB = "$dir/${refGenome}_listAVDB.txt" } |
44 | 44 |
45 # Zero databases is specified | 45 # Zero databases is specified |
46 if( ($dbSNP == 0) && ($segDup == 0) && ($esp == 0) && ($thG == 0) ) | 46 if( ($dbSNP == 0) && ($segDup == 0) && ($esp == 0) && ($thG == 0) ) |
47 { | 47 { |
48 print STDERR "There is no databases selected for filtering against!!!\nPlease choose at least one between dbSNP, SegDup, ESP (only for human genome) or 1000 genome (only for human genome)\n"; | 48 print STDERR "There is no databases selected for filtering against!!!\nPlease chose at least one between dbSNP, SegDup, ESP (only for human genome) or 1000 genome (only for human genome)\n"; |
49 exit; | 49 exit; |
50 } | 50 } |
51 | 51 |
52 | 52 |
53 | 53 |