Mercurial > repos > iarc > mutspec

diff mutspecNmf_wrapper.sh @ 4:916846f73e25 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author iarc
date Fri, 29 Apr 2016 05:11:28 -0400
parents 8c682b3a7c5b
children 097ae310ced0
line wrap: on
line diff
--- a/mutspecNmf_wrapper.sh	Thu Apr 28 03:59:27 2016 -0400
+++ b/mutspecNmf_wrapper.sh	Fri Apr 29 05:11:28 2016 -0400
@@ -3,7 +3,7 @@
 #########################################
 ###     SPECIFY THE NUMBER OF CPU     ###
 #########################################
-cpu=1
+cpu=8
 
 
 
@@ -13,7 +13,7 @@
 source=$1;shift
 input=$1
 
-if [[ $source == "html" ]]
+if [[ $source == "html" ]] 
 then input=${input%%.*}_files/Mutational_Analysis/Figures/Input_NMF/Input_NMF_Count.txt
 fi
 
@@ -44,7 +44,7 @@
 else
 	echo "<td> <center> <a href="NMF/Figures/Heatmap_MixtureCoeff.png">" >> $html
 	echo "<img src="NMF/Figures/Heatmap_MixtureCoeff.png" /></a> <center> </td>" >> $html
-fi
+fi	
 echo "</tr>" >> $html
 echo "</table>" >> $html