Mercurial > repos > iarc > mutspec

view hg19_listAVDB.txt @ 2:9d363eb081b5 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author iarc
date Thu, 28 Apr 2016 03:43:25 -0400
parents 8c682b3a7c5b
children 916846f73e25
line wrap: on
line source

#This is a sample file distributed with Galaxy that is used by the
#MutSpec-Annot tools. The hg19_listAVDB.txt has this format (white space 
#characters are TAB characters):
#
#<RefGenome_DatabaseName>	<operation>
#
# 
#
#hg19_refGene.txt	g
#hg19_genomicSuperDups.txt	r
#hg19_snp138NonFlagged.txt	f
hg19_refGene.txt	g
hg19_knownGene.txt	g
hg19_ensGene.txt	g
hg19_cytoBand.txt	r
hg19_gwasCatalog.txt	r
hg19_genomicSuperDups.txt	r
hg19_snp138.txt	f
hg19_snp138NonFlagged.txt	f
hg19_ALL.sites.2015_08.txt	f
hg19_AFR.sites.2015_08.txt	f
hg19_AMR.sites.2015_08.txt	f
hg19_EAS.sites.2015_08.txt	f
hg19_EUR.sites.2015_08.txt	f
hg19_SAS.sites.2015_08.txt	f
hg19_esp6500siv2_all.txt	f
hg19_esp6500siv2_aa.txt	f
hg19_esp6500siv2_ea.txt	f
hg19_ljb26_sift.txt	f
hg19_ljb26_pp2hdiv.txt	f
hg19_ljb26_pp2hvar.txt	f
hg19_cosmic70.txt	f
hg19_exac03.txt	f
hg19_exac03nontcga.txt	f
hg19_exac03nonpsych.txt	f
hg19_kaviar20150923.txt	f
hg19_hrcr1.txt	f