annotate tool_dependencies.xml @ 1:78f68c1f8a32 draft

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author iarc
date Tue, 28 Jun 2016 02:59:52 -0400
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="R" version="3.1.2">
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4 <repository changeset_revision="4d2fd1413b56" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="mutspec" version="0.1">
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7 <install version="1.0">
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8 <actions>
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9 <action type="setup_r_environment">
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10 <repository changeset_revision="4d2fd1413b56" name="package_r_3_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
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11 <package name="R" version="3.1.2" />
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12 </repository>
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13 <package>http://cran.univ-lyon1.fr/src/contrib/colorspace_1.2-6.tar.gz?raw=true</package>
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14 <package>http://cran.r-project.org/src/contrib/Archive/stringi/stringi_0.4-1.tar.gz?raw=true</package>
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15 <package>http://cran.r-project.org/src/contrib/magrittr_1.5.tar.gz?raw=true</package>
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16 <package>http://cran.r-project.org/src/contrib/stringr_1.0.0.tar.gz?raw=true</package>
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17 <package>http://cran.univ-lyon1.fr/src/contrib/RColorBrewer_1.1-2.tar.gz?raw=true</package>
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18 <package>http://cran.univ-lyon1.fr/src/contrib/dichromat_2.0-0.tar.gz?raw=true</package>
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19 <package>https://cran.r-project.org/src/contrib/Archive/munsell/munsell_0.4.2.tar.gz?raw=true</package>
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20 <package>http://cran.univ-lyon1.fr/src/contrib/labeling_0.3.tar.gz?raw=true</package>
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21 <package>https://cran.r-project.org/src/contrib/Archive/Rcpp/Rcpp_0.11.6.tar.gz</package>
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22 <package>https://cran.r-project.org/src/contrib/Archive/plyr/plyr_1.8.3.tar.gz</package>
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23 <package>https://cran.rstudio.com/src/contrib/Archive/digest/digest_0.6.8.tar.gz?raw=true</package>
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24 <package>https://cran.r-project.org/src/contrib/Archive/gtable/gtable_0.1.2.tar.gz</package>
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25 <package>https://cran.r-project.org/src/contrib/reshape2_1.4.1.tar.gz</package>
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26 <package>https://cran.r-project.org/src/contrib/Archive/scales/scales_0.2.5.tar.gz</package>
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27 <package>http://cran.univ-lyon1.fr/src/contrib/proto_0.3-10.tar.gz?raw=true</package>
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28 <package>https://cran.r-project.org/src/contrib/Archive/ggplot2/ggplot2_1.0.1.tar.gz?raw=true</package>
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29 <package>https://cran.r-project.org/src/contrib/Archive/registry/registry_0.2.tar.gz</package>
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30 <package>https://cran.r-project.org/src/contrib/Archive/xtable/xtable_1.7-4.tar.gz</package>
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31 <package>http://cran.univ-lyon1.fr/src/contrib/pkgmaker_0.22.tar.gz?raw=true</package>
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32 <package>http://cran.univ-lyon1.fr/src/contrib/rngtools_1.2.4.tar.gz?raw=true</package>
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33 <package>http://cran.univ-lyon1.fr/src/contrib/gridBase_0.4-7.tar.gz?raw=true</package>
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34 <package>https://cran.r-project.org/src/contrib/Archive/iterators/iterators_1.0.7.tar.gz</package>
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35 <package>https://cran.r-project.org/src/contrib/Archive/foreach/foreach_1.4.2.tar.gz</package>
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36 <package>https://cran.r-project.org/src/contrib/Archive/doParallel/doParallel_1.0.8.tar.gz</package>
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37 <package>http://cran.univ-lyon1.fr/src/contrib/NMF_0.20.6.tar.gz?raw=true</package>
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38 <package>http://cran.univ-lyon1.fr/src/contrib/gtools_3.5.0.tar.gz?raw=true</package>
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39 <package>https://cran.r-project.org/src/contrib/Archive/gdata/gdata_2.16.1.tar.gz</package>
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40 <package>http://cran.univ-lyon1.fr/src/contrib/bitops_1.0-6.tar.gz?raw=true</package>
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41 <package>http://cran.univ-lyon1.fr/src/contrib/caTools_1.17.1.tar.gz?raw=true</package>
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42 <package>http://cran.univ-lyon1.fr/src/contrib/png_0.1-7.tar.gz?raw=true</package>
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43 <package>https://cran.r-project.org/src/contrib/Archive/gplots/gplots_2.17.0.tar.gz</package>
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44 <package>https://cran.r-project.org/src/contrib/Archive/gridExtra/gridExtra_0.9.1.tar.gz</package>
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45 <package>http://cran.univ-lyon1.fr/src/contrib/reshape_0.8.5.tar.gz?raw=true</package>
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46 <package>http://cran.univ-lyon1.fr/src/contrib/getopt_1.20.0.tar.gz?raw=true</package>
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47 <package>http://cran.univ-lyon1.fr/src/contrib/SnowballC_0.5.1.tar.gz?raw=true</package>
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48 <package>http://cran.univ-lyon1.fr/src/contrib/lsa_0.73.1.tar.gz?raw=true</package>
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49 </action>
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50 </actions>
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51 </install>
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52 </package>
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53 </tool_dependency>