# HG changeset patch # User Ido Tamir # Date 1376841833 -7200 # Node ID ecad2cd5038fc1d49c6e60fa94edcae592b27438 # Parent 44920cae2f4da9a92374727a8687393af6cc44e4 debug message was making truble diff -r 44920cae2f4d -r ecad2cd5038f corr.R --- a/corr.R Sun Aug 18 17:55:44 2013 +0200 +++ b/corr.R Sun Aug 18 18:03:53 2013 +0200 @@ -30,7 +30,7 @@ ## adds mappable regions as 0 coverage to track covWith0 <- function(cov, mappable){ - print(paste("cov:",cov)) + print(paste("cov:", summary(cov))) c0 <- setdiff(mappable, cov) cus <- if(length(c0) > 0){ elementMetadata(c0)$score <- 0 @@ -125,7 +125,7 @@ } getMappable <- function(coverages, mappable){ - print(paste("creating mappability", mappable)) + print(paste("creating mappability", length(coverages), mappable)) if(is.na(mappable)){ createMappable(coverages) }else{