Mercurial > repos > idot > prop_venn
annotate tool_dependencies.xml @ 1:cc6707a1e044 draft default tip
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
author | Ido Tamir <ido.tamir@imp.ac.at> |
---|---|
date | Mon, 24 Sep 2012 16:46:21 +0200 |
parents | |
children |
rev | line source |
---|---|
1
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
1 <?xml version="1.0"?> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
2 <tool_dependency> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
3 <package name="Mako" version="0.7.2"> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
4 <install version="1.0"> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
5 <actions> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
6 <action type="download_by_url">http://pypi.python.org/packages/source/M/Mako/Mako-0.7.2.tar.gz</action> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
7 <action type="make_directory">$INSTALL_DIR/lib/python</action> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
9 <action type="set_environment"> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
10 <environment_variable name="PYTHONPATH" action="append_to">$INSTALL_DIR/lib/python</environment_variable> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
12 </action> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
13 </actions> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
14 </install> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
15 <readme> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
16 prop_venn uses a templating engine called mako |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
17 </readme> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
18 </package> |
cc6707a1e044
added fixes from Brad Langhorst; https://bitbucket.org/account/notifications/read/3443176/patch-for-proportional-venn-tool-in-galaxy; added tool_dependencies for Mako template untested
Ido Tamir <ido.tamir@imp.ac.at>
parents:
diff
changeset
|
19 </tool_dependency> |