Mercurial > repos > ieguinoa > data_manager_fetch_tx2gene

diff data_manager_conf.xml @ 0:a4d4da89aae1 draft

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author ieguinoa
date Wed, 10 Oct 2018 05:44:36 -0400
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children b193b5b8633e
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Wed Oct 10 05:44:36 2018 -0400
@@ -0,0 +1,20 @@
+<?xml version="1.0"?>
+<data_managers>
+<data_manager tool_file="data_manager/data_manager_fetch_tx2gene.xml" id="data_manager_fetch_tx2gene">
+      <data_table name="all_gff">
+            <output>
+                <column name="value" />
+                <column name="dbkey" />
+                <column name="name" />
+                <column name="path" output_ref="out_file">
+                    <move type="file">
+                        <source>${path}</source>
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/tx2gene/${path}</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/tx2gene/${path}</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>