Mercurial > repos > ieguinoa > smap

diff smap_compare.xml @ 0:7d416d98d2c9 draft default tip

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author ieguinoa
date Tue, 22 Mar 2022 13:49:39 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/smap_compare.xml	Tue Mar 22 13:49:39 2022 +0000
@@ -0,0 +1,19 @@
+<tool id="smap_compare" name="SMAP compare (BETA)" version="4.5.0">
+    <requirements>
+        <requirement type="package">ngs-smap</requirement>
+    </requirements>
+<command detect_errors="exit_code"><![CDATA[
+        smap compare $input_bed_1 $input_bed_2;
+        mv SMAP_compare.pdf $out_pdf;
+    ]]></command>
+<inputs>
+        <param name="input_bed_1" type="data" optional="false" label="BED 1 File" help="BED file" format="bed" multiple="false"/>
+        <param name="input_bed_2" type="data" optional="false" label="BED 2 File" help="BED file" format="bed" multiple="false"/>
+</inputs>
+<outputs>
+    <data format="pdf" name="out_pdf" label="Compare output"/>
+</outputs>
+    <help><![CDATA[
+        TODO: Fill in help.
+    ]]></help>
+</tool>