Mercurial > repos > ifb-elixirfr > abromics_extractor_summarize

annotate test-data/summarize/quast_output.json @ 1:39137acb0806 draft

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planemo upload for repository https://gitlab.com/ifb-elixirfr/abromics/galaxy-tools/-/tree/galaxy_dev/abromics_galaxy_json_extractor?ref_type=heads commit 8db8564ece9607d015d3730e06854416011ec05c
author ifb-elixirfr
date Mon, 28 Aug 2023 15:05:54 +0000
parents eb95c9ca5c60
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
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1 [{"reference_database_version": "", "analysis_software_version": "5.0.2", "analysis_software_name": "quast", "results": [{"name": "quast_report", "file_path": "tests/data/dummy/quast/quast_result.tsv", "hid": "12345", "galaxy_hid": "", "content": {"Assembly": "10_Enterococcus_faecalis_S17_L001", "contigs_(>=_0_bp)": "100", "contigs_(>=_1000_bp)": "58", "contigs_(>=_5000_bp)": "48", "contigs_(>=_10000_bp)": "41", "contigs_(>=_25000_bp)": "28", "contigs_(>=_50000_bp)": "20", "Total_length_(>=_0_bp)": "3027634", "Total_length_(>=_1000_bp)": "3015201", "Total_length_(>=_5000_bp)": "2996428", "Total_length_(>=_10000_bp)": "2944723", "Total_length_(>=_25000_bp)": "2735277", "Total_length_(>=_50000_bp)": "2421445", "contigs": "62", "Largest_contig": "436224", "Total_length": "3017519", "GC_(%)": "37.31", "N50": "99915", "N90": "27780", "auN": "154096.4", "L50": "8", "L90": "28", "total_reads": "3489582", "left": "1744791", "right": "1744791", "Mapped_(%)": "99.85", "Properly_paired_(%)": "98.83", "Avg._coverage_depth": "230", "Coverage_>=_1x_(%)": "100.0", "N's_per_100_kbp": "0.00"}}, {"name": "quast_html_path", "file_path": "tests/data/dummy/quast/quast_report.html", "hid": "12345", "galaxy_id": "", "content": {}}], "tool_has_database": false}]