annotate test-data/bracken/bracken_report.tsv @ 5:3fe7ccf893e4 draft

planemo upload for repository https://gitlab.com/ifb-elixirfr/abromics/galaxy-tools commit e7d9e8f7411e216a9e5277803854d23dba615504
author ifb-elixirfr
date Sun, 15 Oct 2023 08:31:13 +0000
parents eb95c9ca5c60
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
1 name taxonomy_id taxonomy_lvl kraken_assigned_reads added_reads new_est_reads fraction_total_reads
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
2 Enterococcus faecalis 1351 S 63 21 84 0.88421
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
3 Enterococcus faecium 1352 S 4 0 4 0.04211
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
4 Enterococcus casseliflavus 37734 S 1 0 1 0.01053
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
5 Streptococcus cristatus 45634 S 1 0 1 0.01053
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
6 Lactococcus garvieae 1363 S 1 0 1 0.01053
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
7 Staphylococcus aureus 1280 S 1 0 1 0.01053
eb95c9ca5c60 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
8 Bacillus oleronius 38875 S 1 0 1 0.01053