Mercurial > repos > ifb-elixirfr > abromics_extractor_summarize

diff test-data/summarize/bandage_output.json @ 0:eb95c9ca5c60 draft

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planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
author ifb-elixirfr
date Mon, 24 Jul 2023 14:57:00 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/summarize/bandage_output.json	Mon Jul 24 14:57:00 2023 +0000
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+[{"analysis_software_version": "1.0", "reference_database_version": "", "analysis_software_name": "bandage", "results": [{"name": "bandage_report", "file_path": "tests/data/dummy/bandage/bandage_info.txt", "hid": "12345", "galaxy_hid": "", "content": {"Node_count": "222", "Edge_count": "299", "Smallest_edge_overlap_(bp)": "127", "Largest_edge_overlap_(bp)": "127", "Total_length_(bp)": "3042326", "Total_length_no_overlaps_(bp)": "3014132", "Dead_ends": "0", "Percentage_dead_ends": "0%", "Connected_components": "2", "Largest_component_(bp)": "3042198", "Total_length_orphaned_nodes_(bp)": "3042198", "N50_(bp)": "79920", "Shortest_node_(bp)": "128", "Lower_quartile_node_(bp)": "151", "Median_node_(bp)": "256", "Upper_quartile_node_(bp)": "7566", "Longest_node_(bp)": "239204", "Median_depth": "22.997", "Estimated_sequence_length_(bp)": "3234717"}}, {"name": "bandage_plot_path", "file_path": "tests/data/dummy/bandage/bandage_plot.svg", "hid": "12345", "galaxy_id": "", "content": {}}], "tool_has_database": false}]
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