Mercurial > repos > ifb-elixirfr > abromics_extractor_summarize

view test-data/bakta/bakta_summary.txt @ 8:ce112a6105fa draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://gitlab.com/ifb-elixirfr/abromics/galaxy-tools commit 8623190a78f9aaaf9a8ec4f039af36307af34e3f
author ifb-elixirfr
date Wed, 27 Mar 2024 13:53:04 +0000
parents eb95c9ca5c60
children
line wrap: on
line source

Sequence(s):
Length: 3027634
Count: 100
GC: 37.3
N50: 99915
N ratio: 0.0
coding density: 87.7

Annotation:
tRNAs: 59
tmRNAs: 1
rRNAs: 6
ncRNAs: 36
ncRNA regions: 44
CRISPR arrays: 1
CDSs: 2887
pseudogenes: 8
hypotheticals: 302
signal peptides: 0
sORFs: 4
gaps: 0
oriCs: 4
oriVs: 0
oriTs: 0

Bakta:
Software: v1.6.1
Database: v4.0
DOI: 10.1099/mgen.0.000685
URL: github.com/oschwengers/bakta