Mercurial > repos > ifb-elixirfr > abromics_galaxy_json_extractor

annotate test-data/bakta/bakta_summary.txt @ 10:ea3598d7e55b draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://gitlab.com/ifb-elixirfr/abromics/galaxy-tools commit 4029d59533f63a6f75a6096e496f48baf7018698
author ifb-elixirfr
date Thu, 28 Mar 2024 13:08:05 +0000
parents b77b0b1e6c74
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
1 Sequence(s):
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
2 Length: 3027634
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
3 Count: 100
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
4 GC: 37.3
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
5 N50: 99915
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
6 N ratio: 0.0
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
7 coding density: 87.7
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
8
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
9 Annotation:
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
10 tRNAs: 59
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
11 tmRNAs: 1
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
12 rRNAs: 6
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
13 ncRNAs: 36
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
14 ncRNA regions: 44
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
15 CRISPR arrays: 1
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
16 CDSs: 2887
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
17 pseudogenes: 8
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
18 hypotheticals: 302
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
19 signal peptides: 0
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
20 sORFs: 4
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
21 gaps: 0
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
22 oriCs: 4
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
23 oriVs: 0
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
24 oriTs: 0
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
25
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
26 Bakta:
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
27 Software: v1.6.1
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
28 Database: v4.0
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
29 DOI: 10.1099/mgen.0.000685
b77b0b1e6c74 planemo upload commit fd67555ae5bcff6d9052259771f805c4cd8124d3-dirty
ifb-elixirfr
parents:
diff changeset
30 URL: github.com/oschwengers/bakta