Mercurial > repos > imgteam > color_deconvolution
comparison color-deconvolution.xml @ 1:0976b373a321 draft
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/color-deconvolution/ commit b2acc1845a25828181597fe5b6982fe116a7796d
| author | imgteam |
|---|---|
| date | Mon, 22 Jul 2019 05:02:00 -0400 |
| parents | 8aa6e767f737 |
| children | 612aa1478fe1 |
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| 0:8aa6e767f737 | 1:0976b373a321 |
|---|---|
| 1 <tool id="ip_color_deconvolution" name="Color Deconvolution" version="0.7"> | 1 <tool id="ip_color_deconvolution" name="Color Deconvolution" version="0.8"> |
| 2 <description>Color deconvolution</description> | 2 <description>Color deconvolution</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="0.14.2">scikit-image</requirement> | 4 <requirement type="package" version="0.14.2">scikit-image</requirement> |
| 5 <requirement type="package" version="4.0.0">pillow</requirement> | 5 <requirement type="package" version="4.0.0">pillow</requirement> |
| 6 <requirement type="package" version="0.18.1">scikit-learn</requirement> | 6 <requirement type="package" version="0.18.1">scikit-learn</requirement> |
| 7 <requirement type="package" version="1.12">numpy</requirement> | 7 <requirement type="package" version="1.12">numpy</requirement> |
| 8 <requirement type="package" version="0.15.1">tifffile</requirement> | |
| 8 </requirements> | 9 </requirements> |
| 9 <command> | 10 <command detect_errors="aggressive"> |
| 10 <![CDATA[ | 11 <![CDATA[ |
| 11 python '$__tool_directory__/color_deconvolution.py' '$input' '$output' '$convtype' | 12 python '$__tool_directory__/color_deconvolution.py' '$input' '$output' '$convtype' |
| 12 ]]> | 13 ]]> |
| 13 </command> | 14 </command> |
| 14 <inputs> | 15 <inputs> |
| 15 <param name="input" type="data" format="tiff,png,jpg,bmp" label="Image file with 3 channels"/> | 16 <param name="input" type="data" format="tiff,png,jpg,bmp" label="Image file with 3 channels"/> |